Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001823-TA|BGIBMGA001823-PA|IPR003579|Ras small GTPase,
Rab type, IPR013753|Ras
(131 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 61 3e-10
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 56 8e-09
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 56 8e-09
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 54 3e-08
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 54 4e-08
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 53 6e-08
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 52 2e-07
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 50 5e-07
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 49 1e-06
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 48 2e-06
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 48 2e-06
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 48 2e-06
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 48 2e-06
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 48 2e-06
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 48 2e-06
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 47 4e-06
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 46 7e-06
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 46 7e-06
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 46 9e-06
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 46 1e-05
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 44 3e-05
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 44 3e-05
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 43 8e-05
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 43 8e-05
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 42 1e-04
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 42 1e-04
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 41 3e-04
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 40 4e-04
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 40 4e-04
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 40 8e-04
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 39 0.001
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 39 0.001
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 39 0.001
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 38 0.003
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 36 0.009
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 35 0.022
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 35 0.022
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 35 0.022
U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical pr... 34 0.028
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 33 0.066
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 33 0.066
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 33 0.066
AF045637-1|AAK72295.1| 212|Caenorhabditis elegans R-ras related... 33 0.066
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 31 0.27
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 31 0.27
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 31 0.27
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 30 0.61
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 30 0.61
U97013-4|AAB52339.1| 968|Caenorhabditis elegans Alanyl trna syn... 29 1.1
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 29 1.4
Z92786-10|CAB07212.3| 984|Caenorhabditis elegans Hypothetical p... 28 1.9
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 28 1.9
AL021473-3|CAA16306.3| 984|Caenorhabditis elegans Hypothetical ... 28 1.9
Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z70754-3|CAA94773.1| 293|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical pr... 28 2.5
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 27 3.3
AF098995-7|AAC67481.1| 253|Caenorhabditis elegans F-box b prote... 27 3.3
U46668-5|AAA93349.2| 569|Caenorhabditis elegans Hypothetical pr... 27 4.3
AF016677-1|AAB66142.1| 134|Caenorhabditis elegans Hypothetical ... 27 4.3
Z48583-1|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z92973-2|CAB07492.2| 964|Caenorhabditis elegans Hypothetical pr... 26 10.0
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 26 10.0
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 26 10.0
U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein. 26 10.0
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 26 10.0
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 60.9 bits (141), Expect = 3e-10
Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Query: 4 IYYRGAHAAIICYEPSSHESWTRLRHWLHEL-RTVEDSCKVYLCGTKKDLLDGGFVKREV 62
+YYRGA AAI+ Y+ ++ ES+ + ++W+ EL R + + L G K D+ + KR V
Sbjct: 87 MYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVAN----KRTV 142
Query: 63 AEEIVNTYSQDLNGHFL-TSSKTGENVDELFQKIVDDL 99
E N Y++D F+ TS+KT NV+++F I L
Sbjct: 143 EYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKL 180
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 56.0 bits (129), Expect = 8e-09
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 14/140 (10%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVED-SCKVYLCGTKKDLLDGGFVK 59
+TR YYRGA A++ Y+ + ++ L WL + +++ + + ++L G K DL D +
Sbjct: 76 VTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLED----Q 131
Query: 60 REVAEEIVNTYSQDLNGHFL-TSSKTGENVDELFQKI-------VDDLAADVEVMKTVTE 111
R+V E ++++ FL S+KTG NV++ F + + D + D+ T +
Sbjct: 132 RDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIYQNIQDGSLDLNAADTGVQ 191
Query: 112 SRLLLTELDKRKSKKDVCAC 131
+ L + KKD C C
Sbjct: 192 PKQNLPRAAENNGKKD-CNC 210
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 56.0 bits (129), Expect = 8e-09
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCKVYLCGTKKDLLDGGFVKR 60
+T YYRG H ++ Y+ ++ ES+ ++ WL E+ DS + L G K + + +R
Sbjct: 75 ITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDSVQKVLVGNKCEENE----RR 130
Query: 61 EVAEEIVNTYSQDLN-GHFLTSSKTGENVDELF 92
V E Y+Q +N F TS+K +NV+ +F
Sbjct: 131 VVLESDARNYAQSMNISFFETSAKEDKNVEPMF 163
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 54.0 bits (124), Expect = 3e-08
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHEL-RTVEDSCKVYLCGTKKDLLDGGFVK 59
+T YYRGAH I+ Y+ + E++ ++ WL E+ R ++ L G K DL K
Sbjct: 76 ITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLT----AK 131
Query: 60 REVAEEIVNTYSQDLNGHFL-TSSKTGENVDELFQKIVDDL 99
R V + Y+ L FL TS+K+ NV++ F + ++
Sbjct: 132 RAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEI 172
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 53.6 bits (123), Expect = 4e-08
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 11/132 (8%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCKVY--LCGTKKDLLDGGFVKREV 62
Y R + A++ Y+ ++ S+ + W+ ++R E C V L G K DL D KR+V
Sbjct: 80 YIRDSSVAVVVYDITNANSFHQTTKWVDDVRN-ERGCDVIIVLVGNKTDLAD----KRQV 134
Query: 63 AEEIVNTYSQDLNGHFL-TSSKTGENVDELFQKIVDDLAADVEVMKTVTESRLLLTE--L 119
+ E ++DLN F+ TS+K G NV +LF+KI L V+ +T + +++
Sbjct: 135 STEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQ-EETPEQPNIVIMNPPK 193
Query: 120 DKRKSKKDVCAC 131
D +S+ C C
Sbjct: 194 DAEESQGRQCPC 205
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 53.2 bits (122), Expect = 6e-08
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCKV-YLCGTKKDLLDGGFVK 59
+T+ YYR AHA ++ Y+ S S+ L WL E+ + + + L G K D D +
Sbjct: 72 ITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVGNKVDKGD----E 127
Query: 60 REVAEEIVNTYSQDLN--GHFL-TSSKTGENVDELFQKIVDDLAADVEV 105
REV E I +S D+N +FL TS+ NVD+LF+++ L D+++
Sbjct: 128 REVPERIGRDFS-DVNQFDYFLETSALDATNVDQLFEQVATRLTNDMKL 175
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDS-CKVYLCGTKKDLLDGGFVK 59
+TR YYRGA A++ Y+ + +++ L WL + R +S + L G K DL +
Sbjct: 71 ITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDL----EAR 126
Query: 60 REVAEEIVNTYSQDLNGHFL-TSSKTGENVDELF 92
REV E ++++ F+ TS+KT NV+E F
Sbjct: 127 REVKREEGEAFAREHGLVFMETSAKTAANVEEAF 160
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 50.0 bits (114), Expect = 5e-07
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELRTVED-SCKVYLCGTKKDLLDGGFVKREVA 63
YYR A A++ Y+ +S ES+ L HWL +L+ + D + L G K DL REV
Sbjct: 75 YYRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDL----EADREVR 130
Query: 64 EEIVNTYSQDLNGHFL-TSSKTGENVDELF 92
+E ++++ F+ S+KT E V+E F
Sbjct: 131 KEEGEAFAREFGLIFMEISAKTNEYVEEAF 160
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 48.8 bits (111), Expect = 1e-06
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDS-CKVYLCGTKKDLLDGGFVKREVA 63
Y R + A++ Y+ ++ S+ + W+ ++RT S + L G K DL D KR+V
Sbjct: 79 YIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD----KRQVT 134
Query: 64 EEIVNTYSQDLNGHFL-TSSKTGENVDELFQKIVDDL 99
+ +++LN F+ TS+K G NV +LF++I L
Sbjct: 135 TDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGAL 171
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 48.4 bits (110), Expect = 2e-06
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVE-DSCKVYLCGTKKDLLDGGFVK 59
+T YYRGA I+ Y+ ++ ES+ ++ W +++T ++ +V L G K D+ V
Sbjct: 87 ITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVS 146
Query: 60 REVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVD 97
+ ++ + + F TS+K NV +F+K+V+
Sbjct: 147 MDRGRQLADQLGLEF---FETSAKENINVKAVFEKLVE 181
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 48.4 bits (110), Expect = 2e-06
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVE-DSCKVYLCGTKKDLLDGGFVK 59
+T YYRGA I+ Y+ ++ ES+ ++ W +++T ++ +V L G K D+ V
Sbjct: 87 ITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVS 146
Query: 60 REVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVD 97
+ ++ + + F TS+K NV +F+K+V+
Sbjct: 147 MDRGRQLADQLGLEF---FETSAKENINVKAVFEKLVE 181
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 48.4 bits (110), Expect = 2e-06
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVE-DSCKVYLCGTKKDLLDGGFVK 59
+T YYRGA I+ Y+ ++ ES+ ++ W +++T ++ +V L G K D+ V
Sbjct: 87 ITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVS 146
Query: 60 REVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVD 97
+ ++ + + F TS+K NV +F+K+V+
Sbjct: 147 MDRGRQLADQLGLEF---FETSAKENINVKAVFEKLVE 181
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 48.4 bits (110), Expect = 2e-06
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVE-DSCKVYLCGTKKDLLDGGFVK 59
+T YYRGA I+ Y+ ++ ES+ ++ W +++T ++ +V L G K D+ V
Sbjct: 101 ITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVS 160
Query: 60 REVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVD 97
+ ++ + + F TS+K NV +F+K+V+
Sbjct: 161 MDRGRQLADQLGLEF---FETSAKENINVKAVFEKLVE 195
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 48.4 bits (110), Expect = 2e-06
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVE-DSCKVYLCGTKKDLLDGGFVK 59
+T YYRGA I+ Y+ ++ ES+ ++ W +++T ++ +V L G K D+ V
Sbjct: 87 ITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVS 146
Query: 60 REVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVD 97
+ ++ + + F TS+K NV +F+K+V+
Sbjct: 147 MDRGRQLADQLGLEF---FETSAKENINVKAVFEKLVE 181
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 48.0 bits (109), Expect = 2e-06
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHEL--RTVEDSCKVYLCGTKKDLLDGGFV 58
M +Y R A AA+I Y+ + ++ + WL +L + + VYL G K DL++
Sbjct: 121 MVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGNKTDLVE---- 176
Query: 59 KREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAADVEVMKTVTESRLLLTE 118
KREV E + +N F S N LF I+ +L+ D V+++ ES T+
Sbjct: 177 KREVTEAEGKAMAAKINAKFFELSNDQPN---LFAAILSELSDD--VLQSRQESSEKKTD 231
Query: 119 LDKRKSKK 126
L + +K
Sbjct: 232 LQLIRKEK 239
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 47.2 bits (107), Expect = 4e-06
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHEL-RTVEDSCKVYLCGTKKDLLDGGFVK 59
+T+ YYR A+ ++CY+ + +S+ L+ W+ ++ + + L GTK DL D ++
Sbjct: 75 ITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCDLEDQRAIE 134
Query: 60 REVAEEIVNTYSQDLNGHFL---TSSKTGENVDELFQKI 95
E AE + Q NG F TS+K NVD F ++
Sbjct: 135 AEEAEML-----QRANGMFAMLETSAKGNVNVDNAFLEL 168
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 46.4 bits (105), Expect = 7e-06
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRT-VEDSCKVYLCGTKKDLLDGGFVK 59
+T YYRGA I+ Y+ ++ S+ +++W+ + + + G K D+ + V
Sbjct: 73 ITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVS 132
Query: 60 REVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAADVE 104
R+ E++ Y TS+K N+DE F + D+ + +E
Sbjct: 133 RDRGEQLAIEYGTKF---LETSAKANLNIDEAFFTLARDIKSKME 174
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 46.4 bits (105), Expect = 7e-06
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRT-VEDSCKVYLCGTKKDLLDGGFVK 59
+T YYRGA I+ Y+ ++ S+ +++W+ + + + G K D+ + V
Sbjct: 73 ITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVS 132
Query: 60 REVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAADVE 104
R+ E++ Y TS+K N+DE F + D+ + +E
Sbjct: 133 RDRGEQLAIEYGTKF---LETSAKANLNIDEAFFTLARDIKSKME 174
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 46.0 bits (104), Expect = 9e-06
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRT-VEDSCKVYLCGTKKDLLDGGFVK 59
+T YYRGA A++ Y+ + H ++ + WL ELR + + + L G K DL
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRH----L 131
Query: 60 REVAEEIVNTYSQDLNGHFL-TSSKTGENVDELFQKIVDDLAADV 103
R V + Y++ F+ TS+ NV+ F I+ ++ V
Sbjct: 132 RAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSV 176
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 45.6 bits (103), Expect = 1e-05
Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRT-VEDSCKVYLCGTKKDLLDGGFVK 59
+T+ Y+R A ++ ++ +S +S+ +R+W+ +R V+D+ + L G K DL +
Sbjct: 268 ITKQYFRKADGVVLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCLVGNKMDLFGSDIAR 327
Query: 60 REVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDL 99
V + F TS+ TG +D +++ ++L
Sbjct: 328 SAVYRAAEKLAVEFKIPFFETSAYTGFGIDTCMRQMAENL 367
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 45.2 bits (102), Expect = 2e-05
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELR-----TVEDSCKVYLCGTKKDLLDG 55
+T+ YYR + + Y+ ++ ES+ + +W+ E C L GTK D+
Sbjct: 83 ITKSYYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLVGTKSDMDSQ 142
Query: 56 GFVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAADVE 104
V E E + TSS+TG+NV+E F I ++ V+
Sbjct: 143 RQVNYEEGEYFAKYHKMKF---IETSSRTGDNVNEAFHMIAQEIQNRVD 188
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 44.4 bits (100), Expect = 3e-05
Identities = 25/131 (19%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 4 IYYRGAHAAIICYEPSSHESWTRLRHWLHELRT-VEDSCKVYLCGTKKDLLDGGFVKREV 62
IYYRG++ ++ ++ + +S+ ++++W+ E++T + ++ ++ + G K DL + +R+V
Sbjct: 80 IYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLEE----ERQV 135
Query: 63 AEEIVNTYSQDLNGHFL-TSSKTGENVDELFQKIVDDLAADVEVMKT---VTESRLLLTE 118
+ Y++ ++ TS++ + + F+ + + T T + L +
Sbjct: 136 TRQDAEAYAESEGALYMETSAQDNVGISDAFESLTAKMIEHSRTRSTEPPSTNRSIRLID 195
Query: 119 LDKRKSKKDVC 129
D+ + K C
Sbjct: 196 NDEAERSKKCC 206
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 44.4 bits (100), Expect = 3e-05
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHEL--RTVEDSCKVYLCGTKKDLLDGGFV 58
+T YYRGA ++ Y+ ++ +S+ + WL + ED K+ L G K D+ D V
Sbjct: 74 ITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMIL-GNKCDMSDRRVV 132
Query: 59 KREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAA 101
RE E+I + ++ H TS+K +VD F + + + A
Sbjct: 133 SRERGEKIAQDHG--ISFH-ETSAKLNVHVDTAFYDLAEAILA 172
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 42.7 bits (96), Expect = 8e-05
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTV-EDSCKVYLCGTKKDLLDGGFVK 59
+T YYR A A ++ Y+ ++ S+ R+WL +++ +++ +V L G K DL V
Sbjct: 68 VTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDLPRA--VP 125
Query: 60 REVAEEIVNTYSQDLNGHFLTSSKTGENVDELF 92
+ + + Y TS+KTG NVD F
Sbjct: 126 TDEGKRLAEAYQIPF---METSAKTGFNVDRAF 155
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 42.7 bits (96), Expect = 8e-05
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTV-EDSCKVYLCGTKKDLLDGGFVK 59
+T YYR A A ++ Y+ ++ S+ R+WL +++ +++ +V L G K DL V
Sbjct: 68 VTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDLPRA--VP 125
Query: 60 REVAEEIVNTYSQDLNGHFLTSSKTGENVDELF 92
+ + + Y TS+KTG NVD F
Sbjct: 126 TDEGKRLAEAYQIPF---METSAKTGFNVDRAF 155
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 42.3 bits (95), Expect = 1e-04
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELRT-VEDSCKVYLCGTKKDLLDGGFVKREVA 63
YYRGA A++ Y+ S H+++ + WL LR + + L G K DL V
Sbjct: 77 YYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDL------SHAVP 130
Query: 64 EEIVNTYSQDLNGHFL-TSSKTGENVDELFQKIVDDL 99
+ Y++ + F+ TS+ NV+ F IV ++
Sbjct: 131 TDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEI 167
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 41.9 bits (94), Expect = 1e-04
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELR-TVEDSCKVYLCGTKKDLLDGGFVK 59
+ + Y+R A AI+ Y+ + +S+ R+R W+ ++ + E S + L G K D+
Sbjct: 526 LCKSYFRRADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVDMRIS--TP 583
Query: 60 REVAEEIVNTYSQDLNGHFL-TSSKTGENVDELFQKIVDDLAA--DVEVMKT 108
VA+ + + + F+ TS+ G N+D + +L A DVE+ T
Sbjct: 584 GSVAKTDGASMAAAMGVLFMETSALDGSNIDNAMLALTRELMAVEDVEIRST 635
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 40.7 bits (91), Expect = 3e-04
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRT--VEDSCKVYLCGTKKDLLDGGFV 58
+T YYRGA I Y+ +S S+ +L HW+ E+ T D+ + K D+
Sbjct: 76 LTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDM-----P 130
Query: 59 KREVAEEIVNTYSQDLNGHFL-TSSKTGENVDELFQKIVDDL 99
R V E +++ F+ S+KT E V F+++++ +
Sbjct: 131 NRVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKI 172
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 40.3 bits (90), Expect = 4e-04
Identities = 31/122 (25%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCK---VYLCGTKKDLLDGGF 57
+T ++R A I+ ++ ++ +S+ +R WL +L+ V C+ + +CG K DL +
Sbjct: 81 LTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLK-VHAYCEQPDIIICGNKADLEN--- 136
Query: 58 VKREVAEEIVNTYSQDLN-GHFLTSSKTGENVDELFQKIVDDLAADVEVMKTVTESRLLL 116
+R+V+ + L +F TS+ T NV++ ++D + + ++V S L L
Sbjct: 137 -RRQVSTARAKQLADQLGLPYFETSACTSTNVEKSVDCLLDLVMQ--RIQQSVETSSLPL 193
Query: 117 TE 118
+E
Sbjct: 194 SE 195
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 40.3 bits (90), Expect = 4e-04
Identities = 31/122 (25%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCK---VYLCGTKKDLLDGGF 57
+T ++R A I+ ++ ++ +S+ +R WL +L+ V C+ + +CG K DL +
Sbjct: 81 LTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLK-VHAYCEQPDIIICGNKADLEN--- 136
Query: 58 VKREVAEEIVNTYSQDLN-GHFLTSSKTGENVDELFQKIVDDLAADVEVMKTVTESRLLL 116
+R+V+ + L +F TS+ T NV++ ++D + + ++V S L L
Sbjct: 137 -RRQVSTARAKQLADQLGLPYFETSACTSTNVEKSVDCLLDLVMQ--RIQQSVETSSLPL 193
Query: 117 TE 118
+E
Sbjct: 194 SE 195
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 39.5 bits (88), Expect = 8e-04
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 3 RIYYRGAHAAIICYEPSSHESWTRLRHWLHELRT-VEDSCKVYLCGTKKDLLDGGFVKRE 61
R YYR A A++ Y+ + +S+ L WL +LR + L G K DL R+
Sbjct: 73 RAYYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDLK----AVRD 128
Query: 62 VAEEIVNTYSQDLNGHFL-TSSKTGENVDELF 92
V E +++ F+ TS+K ++V++ F
Sbjct: 129 VTTEEGEAFAKKNGLTFMETSAKANKHVEKAF 160
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 39.1 bits (87), Expect = 0.001
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCKVYLCGTKKDLLDGGFVKREVAE 64
YY AII ++ ++ ++ + +W H+L V ++ + LCG K D+ D R+V
Sbjct: 12 YYIQGQCAIIMFDVTARVTYKNVPNWHHDLARVCENIPIVLCGNKVDVKD-----RKVKA 66
Query: 65 EIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAAD 102
+ + + + ++ S+K+ N ++ F + L D
Sbjct: 67 KTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLLGD 104
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 5 YYRGAHAAIICYEPSSHESWTRL-RHWLHELRT-VEDSCKVYLCGTKKDLLDGGFVKREV 62
YY AH + Y+ ++ +S+ L ++WL E++ + + L G K D+ V +
Sbjct: 75 YYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQERKVDFDR 134
Query: 63 AEEIVNTYSQDLNGHFLTSSKTGENVDELFQKI 95
AE++ + L + S+KTG N +E F +
Sbjct: 135 AEKLASRLGVSL---YEVSAKTGINCEEAFHTL 164
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 38.7 bits (86), Expect = 0.001
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRT 36
+T YYRGA I Y+ +S S+ +L HW+ E+ T
Sbjct: 49 LTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDT 84
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCKVYL-CGTKKD 51
+T YYRGA A++ Y+ + H ++ + WL ELR D V + G K D
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGNKCD 127
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 35.9 bits (79), Expect = 0.009
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCKVYLCGTKKDLLDGGFVKREVAE 64
YY AII ++ ++ ++ + +W +L V ++ + LCG K D+ D R+V
Sbjct: 78 YYIQGQCAIIMFDVTARVTYKNVPNWHRDLARVCENIPIVLCGNKVDVKD-----RKVKA 132
Query: 65 EIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAAD 102
+ + + + ++ S+K+ N ++ F + L D
Sbjct: 133 KTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLLGD 170
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 34.7 bits (76), Expect = 0.022
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDS-CKVYLCGTKKDLLDGGFVK 59
M YYR A ++ + + ++ L+ ++ + + L G K DL +
Sbjct: 67 MRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNKSDLAE----T 122
Query: 60 REVAEEIVNTYSQDLN-GHFLTSSKTGENVDELFQK 94
R+V E + +++ L +F TS++ +NV E+F++
Sbjct: 123 RQVDESEAHNFAEKLKIPYFETSARLNQNVSEVFEE 158
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 34.7 bits (76), Expect = 0.022
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSC----KVYLCGTKKDLLDGG 56
M R+ +A I+ Y ++ +S+ L + ++ V+ + + L G KKD
Sbjct: 1 MQRLSISKGNAFILIYSVTNKQSFAELVPIIEMMKEVKGNAIAETPIMLVGNKKDEES-- 58
Query: 57 FVKREVAEEIVNTYSQDLNGHFL-TSSKTGENVDELFQKIV 96
KREV+ + ++ F+ TS+K EN+ ELFQ+++
Sbjct: 59 --KREVSSNSGQKVATNMECGFIETSAKNNENITELFQQLL 97
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 34.7 bits (76), Expect = 0.022
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 6 YRGAHAAIICYEPSSHESWTRLRH-WLHELRTVE-DSCKVYLCGTKKDLLDGGFVKREVA 63
Y A+ ++C+ ++ R W+ E+R D+ + L GTK DL+D + V
Sbjct: 73 YPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDNVPIMLVGTKNDLVDDADSRNTVT 132
Query: 64 EEIVNTYSQDLNGH--FLTSSKTGENVDELFQK 94
E+ + ++ H + S+ T + + +F +
Sbjct: 133 EDYAKRVAHEIGCHKFYSCSALTHKGLKRVFDE 165
>U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical
protein C52B11.5 protein.
Length = 238
Score = 34.3 bits (75), Expect = 0.028
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 7 RGAHAAIICYEPSSHESWTRLRHWL-HELRTVEDSCKVYLCGTKKDLLDGGFVKREVAEE 65
R A ++ Y ES+ +L+ L H R + + + + GTK D+ + +V +
Sbjct: 96 RDVDAVLLFYAADDLESFKQLKENLVHVQRKIPPNANITVVGTKADVKE-----MQVQWQ 150
Query: 66 IVNTYSQDLN-GHFLTSSKTGENVDELFQKIVDDL 99
V++++++ F TSSKTG NV+ + I++ +
Sbjct: 151 EVDSFAENQGFSCFETSSKTGVNVEIILHDILETI 185
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 33.1 bits (72), Expect = 0.066
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHEL--RTVE-DSCKVYLCGTKKDLLDGGF 57
M Y R +I + + S+ ++ LHEL R + D + L G K DL +
Sbjct: 81 MREQYLRTGSGFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERH 139
Query: 58 VKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIV 96
V R AEE+ + S + S+K +NVDE F IV
Sbjct: 140 VARHEAEELAHRLSIP---YLECSAKIRKNVDEAFFDIV 175
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 33.1 bits (72), Expect = 0.066
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHEL--RTVE-DSCKVYLCGTKKDLLDGGF 57
M Y R +I + + S+ ++ LHEL R + D + L G K DL +
Sbjct: 81 MREQYLRTGSGFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERH 139
Query: 58 VKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIV 96
V R AEE+ + S + S+K +NVDE F IV
Sbjct: 140 VARHEAEELAHRLSIP---YLECSAKIRKNVDEAFFDIV 175
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 33.1 bits (72), Expect = 0.066
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHEL--RTVE-DSCKVYLCGTKKDLLDGGF 57
M Y R +I + + S+ ++ LHEL R + D + L G K DL +
Sbjct: 81 MREQYLRTGSGFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERH 139
Query: 58 VKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIV 96
V R AEE+ + S + S+K +NVDE F IV
Sbjct: 140 VARHEAEELAHRLSIP---YLECSAKIRKNVDEAFFDIV 175
>AF045637-1|AAK72295.1| 212|Caenorhabditis elegans R-ras related
protein 1, isoform a protein.
Length = 212
Score = 33.1 bits (72), Expect = 0.066
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHEL--RTVE-DSCKVYLCGTKKDLLDGGF 57
M Y R +I + + S+ ++ LHEL R + D + L G K DL +
Sbjct: 81 MREQYLRTGSGFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERH 139
Query: 58 VKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIV 96
V R AEE+ + S + S+K +NVDE F IV
Sbjct: 140 VARHEAEELAHRLSIP---YLECSAKIRKNVDEAFFDIV 175
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 31.1 bits (67), Expect = 0.27
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHW---LHELRTVEDSCKV--YLCGTKKDLLDG 55
MTR+YY+ AHAAII + + + W L + T+ D V L K D +D
Sbjct: 77 MTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLANKCD-IDN 135
Query: 56 GFVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQ 93
++ + N G F TS+K ++E F+
Sbjct: 136 KLGDDKLYDLETN---NGFVGSFRTSAKESVGIEEAFK 170
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 31.1 bits (67), Expect = 0.27
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHEL 34
+T YYRGA I+ Y+ ++ S+ +++W+ +
Sbjct: 73 ITTAYYRGAMGIILVYDITNERSFENIKNWIRNI 106
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 31.1 bits (67), Expect = 0.27
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHW---LHELRTVEDSCKV--YLCGTKKDLLDG 55
MTR+YY+ AHAAII + + + W L + T+ D V L K D +D
Sbjct: 77 MTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLANKCD-IDN 135
Query: 56 GFVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQ 93
++ + N G F TS+K ++E F+
Sbjct: 136 KLGDDKLYDLETN---NGFVGSFRTSAKESVGIEEAFK 170
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 29.9 bits (64), Expect = 0.61
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCKV--YLCGTKKDLLDGGFVKREV 62
Y R ++ + + +S+ + ++ ++R V+DS V L G K DL R V
Sbjct: 71 YMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDLSSRSVDFRTV 130
Query: 63 AEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDL 99
+E +++ TS+KT VDE F +V ++
Sbjct: 131 SETAKGYGIPNVD----TSAKTRMGVDEAFYTLVREI 163
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 29.9 bits (64), Expect = 0.61
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCKV--YLCGTKKDLLDGGFVKREV 62
Y R ++ + + +S+ + ++ ++R V+DS V L G K DL R V
Sbjct: 74 YMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDLSSRSVDFRTV 133
Query: 63 AEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDL 99
+E +++ TS+KT VDE F +V ++
Sbjct: 134 SETAKGYGIPNVD----TSAKTRMGVDEAFYTLVREI 166
>U97013-4|AAB52339.1| 968|Caenorhabditis elegans Alanyl trna
synthetase protein 2 protein.
Length = 968
Score = 29.1 bits (62), Expect = 1.1
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 38 EDSCKVYLCGTK--KDLLDGGFVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDEL 91
EDS KV LC K K L+ G E E+ G + TGENVD+L
Sbjct: 898 EDSGKV-LCLAKVDKSLVSNGLKANEWVNEVCTVLGGKGGGKDANAQLTGENVDKL 952
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHEL--RTVEDSCKVYL 45
+T YYRGA ++ Y+ ++ +S+ + WL + ED K+ L
Sbjct: 74 ITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMIL 120
>Z92786-10|CAB07212.3| 984|Caenorhabditis elegans Hypothetical
protein Y20C6A.1 protein.
Length = 984
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 19 SSHESWTRLRHWLHELRTVEDSCKVYLCGTKKDLLDGGFVKREVAEEIVNT 69
+ E + ++ ++ HE+ T D ++ C TK GFV+ EV + VN+
Sbjct: 588 NGEELYRKIWYFPHEVHTSYD-LRIEYCNTKDYTFQFGFVEAEVNPQHVNS 637
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 28.3 bits (60), Expect = 1.9
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELR---TVEDS-CKVYLCGTKKDLLDGGFVKR 60
YYR +A + Y+ + ES+ L W+ E V DS L G K D+ V
Sbjct: 170 YYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKCDVECTNRVST 229
Query: 61 EVAEEIVNTYSQDLNGHFLTSSKTGENVDEL 91
+ A+ + + L F TS+K D +
Sbjct: 230 DEAQMFADRNNMAL---FETSAKLASEADHV 257
>AL021473-3|CAA16306.3| 984|Caenorhabditis elegans Hypothetical
protein Y20C6A.1 protein.
Length = 984
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 19 SSHESWTRLRHWLHELRTVEDSCKVYLCGTKKDLLDGGFVKREVAEEIVNT 69
+ E + ++ ++ HE+ T D ++ C TK GFV+ EV + VN+
Sbjct: 588 NGEELYRKIWYFPHEVHTSYD-LRIEYCNTKDYTFQFGFVEAEVNPQHVNS 637
>Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical
protein R11H6.1 protein.
Length = 473
Score = 27.9 bits (59), Expect = 2.5
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 17 EPSSHESWTRLRHWLHE-LRTVEDSCKVYLCGTKKDLLDGGFVKREVAEEIVNTYSQDLN 75
+PS + R+ HW+ E L T+ C++ GT++ L+G VK + ++ T D N
Sbjct: 35 DPSKRDETIRMVHWMKEKLETIGTICELADLGTQE--LEGKTVK--LPPVLLGTLGSDKN 90
>Z70754-3|CAA94773.1| 293|Caenorhabditis elegans Hypothetical
protein F58E6.3 protein.
Length = 293
Score = 27.9 bits (59), Expect = 2.5
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 2 TRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTV--EDSCKVYLCGTKKDLLDGGF 57
T Y +GA+ A +C + ++ T HWL + E+ K+Y C K + GF
Sbjct: 195 TTTYQQGANTAKMCEWTNQCKASTHNCHWLAACIDLPDENHKKMYSCKCKPGFVGNGF 252
>Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical
protein DH11.3 protein.
Length = 1270
Score = 27.9 bits (59), Expect = 2.5
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 42 KVYLCGTKKDLLDGGFVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLA- 100
++ + G D+LD +++++ IV + +G + + K G NVDE K D+A
Sbjct: 457 EILIDGKNIDMLDAKSLRQQIG--IVQQEPKLFDGTIMENIKLGRNVDEETIKTAADIAN 514
Query: 101 --ADVEVMKTVTESRL 114
+ +E ++ E+RL
Sbjct: 515 ASSFIEKLENGYETRL 530
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like
protein.
Length = 66
Score = 27.5 bits (58), Expect = 3.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHE 33
YYR +A + Y+ + ES+ L W+ E
Sbjct: 17 YYRNVNAVVFVYDVTCRESFNDLALWIKE 45
>AF098995-7|AAC67481.1| 253|Caenorhabditis elegans F-box b protein
protein 25 protein.
Length = 253
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 64 EEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAADVEVM 106
E IV+ + +D + GEN DEL+ I + +E M
Sbjct: 112 EHIVHVFCKDQGALLKLENSAGENFDELYDMIANITIVHLEFM 154
>U46668-5|AAA93349.2| 569|Caenorhabditis elegans Hypothetical
protein F38E9.1 protein.
Length = 569
Score = 27.1 bits (57), Expect = 4.3
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 28 RHWLHELRTVEDSCKVYLCGTKKDL----LDGGFVKREVAEEIVNTYSQDLNG 76
R +LH ++ + C + LC T DL LD +++E +V QD++G
Sbjct: 160 RFFLHPFSSIAERCGISLCPTDVDLRIVTLD-ELIEKEFRIIVVGPSDQDMDG 211
>AF016677-1|AAB66142.1| 134|Caenorhabditis elegans Hypothetical
protein ZK1240.4 protein.
Length = 134
Score = 27.1 bits (57), Expect = 4.3
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 83 KTGENVDELFQKIVDDLAADVEVMKTVTESRL-LLTELDKR 122
K ++VDE +KI+DD A+ ++ + E + LT+L R
Sbjct: 16 KIRQSVDEKEKKIIDDTTAEATRIRQLNEENITYLTDLKAR 56
>Z48583-1|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
F54B3.1 protein.
Length = 3396
Score = 26.6 bits (56), Expect = 5.7
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 3 RIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCKVYLCGTKKDL-LDGGFVKRE 61
RI + HA++ P+ E RL L L + +VYLCG +K + + G RE
Sbjct: 2420 RIRFEFQHASL----PALFEIRNRLEVSLGGLHESDIRERVYLCGLRKPMENENGISLRE 2475
Query: 62 VAEEIVNTYSQDLNGHFLTS 81
I T+ D LT+
Sbjct: 2476 SNLSIFGTHPHDGRFEVLTT 2495
>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical
protein K07G5.3 protein.
Length = 1202
Score = 26.2 bits (55), Expect = 7.5
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 55 GGFVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAADVEVMKTV-TESR 113
G ++ + + + +N SQ+ + FL+ + GE +EL +VD+ A++ + + ES+
Sbjct: 81 GKILEEKQSVKPINEESQN-SMSFLSQTSEGEQKEELSVGVVDEQASESSIQQEARKESK 139
Query: 114 LLLTELDKRKSKKDV 128
L ++ ++K V
Sbjct: 140 EQLRNRIRKSAQKAV 154
>Z92973-2|CAB07492.2| 964|Caenorhabditis elegans Hypothetical
protein Y6G8.2 protein.
Length = 964
Score = 25.8 bits (54), Expect = 10.0
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 26 RLRHWLHELRTVEDSCKVYLCGTKKDLLDGGFVKREVAEEIVNT 69
++ ++ HE+ T D ++ C T GFV+ EV +IVN+
Sbjct: 572 KIWYFPHEVHTSYD-LRIEYCITNDYTFQFGFVEAEVKPQIVNS 614
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 25.8 bits (54), Expect = 10.0
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 63 AEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAADVEVMKTVTESRLLLTELDKR 122
A+E + + D +G + + GE ++E ++ DD+ + E T T + E R
Sbjct: 6099 ADESDDKHDGDNDGEWKVYDRHGEVLEEFSTQLTDDVIQEAEGDAT-THIMMTQAEYSPR 6157
Query: 123 KSK 125
+SK
Sbjct: 6158 RSK 6160
Score = 25.8 bits (54), Expect = 10.0
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 88 VDELFQKIVDDLAADVEVMKTVTESRLLLTELDKRKSKKDVC 129
VD++ Q++V ++ + + KT+T S LT +K + D C
Sbjct: 6253 VDDVLQQVVQEINEEDDDKKTMT-STSYLTATEKDDQEYDTC 6293
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 25.8 bits (54), Expect = 10.0
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 63 AEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAADVEVMKTVTESRLLLTELDKR 122
A+E + + D +G + + GE ++E ++ DD+ + E T T + E R
Sbjct: 6099 ADESDDKHDGDNDGEWKVYDRHGEVLEEFSTQLTDDVIQEAEGDAT-THIMMTQAEYSPR 6157
Query: 123 KSK 125
+SK
Sbjct: 6158 RSK 6160
Score = 25.8 bits (54), Expect = 10.0
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 88 VDELFQKIVDDLAADVEVMKTVTESRLLLTELDKRKSKKDVC 129
VD++ Q++V ++ + + KT+T S LT +K + D C
Sbjct: 6253 VDDVLQQVVQEINEEDDDKKTMT-STSYLTATEKDDQEYDTC 6293
>U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein.
Length = 869
Score = 25.8 bits (54), Expect = 10.0
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 88 VDELFQKIVDDLAADVEVMKTVTESRLLLTELDKRKSKKDVC 129
VD++ Q++V ++ + + KT+T S LT +K + D C
Sbjct: 128 VDDVLQQVVQEINEEDDDKKTMT-STSYLTATEKDDQEYDTC 168
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 25.8 bits (54), Expect = 10.0
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 33 ELRTVEDSCKVYLCGTKKDLLDGGFVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELF 92
+++ + K L +K + ++RE AE +N +L +K E E
Sbjct: 3245 DIKDSKTKAKELLQALEKAIPQEDAIRREQAE--INDRLNNLEKEL---TKVDEFKPEDA 3299
Query: 93 QKIVDDLAADVEVMKTVTES 112
IVD LAA+ +KT T+S
Sbjct: 3300 LPIVDQLAANTNTLKTATDS 3319
Score = 25.8 bits (54), Expect = 10.0
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 33 ELRTVEDSCKVYLCGTKKDLLDGGFVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELF 92
+++ + K L +K + ++RE AE +N +L +K E E
Sbjct: 4148 DIKDSKTKAKELLQALEKAIPQEDAIRREQAE--INDRLNNLEKEL---TKVDEFKPEDA 4202
Query: 93 QKIVDDLAADVEVMKTVTES 112
IVD LAA+ +KT T+S
Sbjct: 4203 LPIVDQLAANTNTLKTATDS 4222
Score = 25.8 bits (54), Expect = 10.0
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 33 ELRTVEDSCKVYLCGTKKDLLDGGFVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELF 92
+++ + K L +K + ++RE AE +N +L +K E E
Sbjct: 5102 DIKDSKTKAKELLQALEKAIPQEDAIRREQAE--INDRLNNLEKEL---TKVDEFKPEDA 5156
Query: 93 QKIVDDLAADVEVMKTVTES 112
IVD LAA+ +KT T+S
Sbjct: 5157 LPIVDQLAANTNTLKTATDS 5176
Score = 25.8 bits (54), Expect = 10.0
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 33 ELRTVEDSCKVYLCGTKKDLLDGGFVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELF 92
+++ + K L +K + ++RE AE +N +L +K E E
Sbjct: 6005 DIKDSKTKAKELLQALEKAIPQEDAIRREQAE--INDRLNNLEKEL---TKVDEFKPEDA 6059
Query: 93 QKIVDDLAADVEVMKTVTES 112
IVD LAA+ +KT T+S
Sbjct: 6060 LPIVDQLAANTNTLKTATDS 6079
Score = 25.8 bits (54), Expect = 10.0
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 33 ELRTVEDSCKVYLCGTKKDLLDGGFVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELF 92
+++ + K L +K + ++RE AE +N +L +K E E
Sbjct: 6908 DIKDSKTKAKELLQALEKAIPQEDAIRREQAE--INDRLNNLEKEL---TKVDEFKPEDA 6962
Query: 93 QKIVDDLAADVEVMKTVTES 112
IVD LAA+ +KT T+S
Sbjct: 6963 LPIVDQLAANTNTLKTATDS 6982
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.133 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,264,764
Number of Sequences: 27539
Number of extensions: 128272
Number of successful extensions: 544
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 482
Number of HSP's gapped (non-prelim): 79
length of query: 131
length of database: 12,573,161
effective HSP length: 74
effective length of query: 57
effective length of database: 10,535,275
effective search space: 600510675
effective search space used: 600510675
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
- SilkBase 1999-2023 -