Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001822-TA|BGIBMGA001822-PA|IPR010285|Protein of unknown
function DUF889, eukaryote
(240 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53823| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_19826| Best HMM Match : DUF889 (HMM E-Value=0.053) 51 7e-07
SB_48260| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_19506| Best HMM Match : Viral_helicase1 (HMM E-Value=2.7) 36 0.030
SB_28309| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.069
SB_50259| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.091
SB_28626| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_36343| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_36931| Best HMM Match : FabA (HMM E-Value=5.5) 32 0.49
SB_29469| Best HMM Match : UCH (HMM E-Value=6.7e-06) 30 1.5
SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_40864| Best HMM Match : Pox_G5 (HMM E-Value=0.48) 29 2.6
SB_55122| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_10124| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19) 29 3.4
SB_11635| Best HMM Match : Borrelia_P13 (HMM E-Value=9.9) 29 3.4
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 28 7.9
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 28 7.9
SB_46623| Best HMM Match : LEA_2 (HMM E-Value=9.9) 28 7.9
SB_20782| Best HMM Match : OGFr_III (HMM E-Value=2.5) 28 7.9
SB_11653| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_6818| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_53823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 57.2 bits (132), Expect = 1e-08
Identities = 57/171 (33%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 60 TNMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSYPVEFL 119
TN +D + L E V QIN+ +S++ G F + DT DT Q + L
Sbjct: 396 TNQIEKDGILATK-LCTHKENVDQINKVHLSKLPGKSFLFSACDT--DTSQSQA-----L 447
Query: 120 NSLELSGVPSHKLRLKVGVPVLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIMTGMAKG 178
N + VP KL LKVG V+L +NLD R L NG R V + I+
Sbjct: 448 N--KQVPVPE-KLELKVGAQVMLAKNLDVSRGLVNGARGVVKAFESGNLTNPIVKFTCGV 504
Query: 179 ENVLIPRIPIIPTDLPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEK 229
E + +I T R Q PLK+A+A++I+K+QG TL I+L +
Sbjct: 505 EKAITAEKWVIRTAGGVMVSRRQLPLKLAWAVSIHKSQGMTLDCLEISLAR 555
>SB_19826| Best HMM Match : DUF889 (HMM E-Value=0.053)
Length = 203
Score = 51.2 bits (117), Expect = 7e-07
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Query: 78 NEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSYPVEFLNSLELSGVPSHKLRLKVG 137
N V ++N Q ++ ++GD E+L+ DT S P + +++ + KL LKVG
Sbjct: 48 NVQVNEVNAQHLASLQGDAEEYLARDT-------GSLP--YRDNMNKYVIAMDKLVLKVG 98
Query: 138 VPVLLMRNLDAPRLCNGTRLQVTHLGRNIVKAIIMTGMAKGENVLIPRIPIIPTDLPFQF 197
V+L++NL L NG+R VT + I+ K + + +
Sbjct: 99 AQVMLLKNL-TDELINGSRGIVTGFDEE-KRPIVKFTDGKERTISEMDWNLENSAGQVLA 156
Query: 198 KRLQFPLKIAFAMTINKAQGQTLKVAGINL 227
+R+Q PLK A+A+TI+K+QG ++ + ++L
Sbjct: 157 RRVQIPLKPAWAITIHKSQGMSIDLLQVDL 186
>SB_48260| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 37.1 bits (82), Expect = 0.013
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 18/129 (13%)
Query: 119 LNSLELSGVPSHKLRLKVGVPVLLMRNL-DAPRLCNGTR-------LQVTHLGRNIVKAI 170
++S E+SG+ + L G V+L NL + LCNG+ Q H + A+
Sbjct: 50 VSSDEMSGLEP-LVFLARGAKVMLTMNLWSSVGLCNGSTGTIKDIIYQTGHQPPELPIAV 108
Query: 171 IM-----TG--MAKGENVLIPRIPIIPTDLPFQ--FKRLQFPLKIAFAMTINKAQGQTLK 221
I+ TG ++ +N +P PI T +R Q PLK+A+ +TI+K+QG T
Sbjct: 109 IVHFDHYTGPSISATQNSYVPICPITATAHMADGIHERHQLPLKLAWPITIHKSQGLTFS 168
Query: 222 VAGINLEKS 230
A I++ KS
Sbjct: 169 KAWIDIGKS 177
>SB_19506| Best HMM Match : Viral_helicase1 (HMM E-Value=2.7)
Length = 828
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 182 LIPRIPIIPTDLPFQFK----RLQFPLKIAFAMTINKAQGQTL 220
++P +PI+P + R+Q PL++A+ MTI+K QG T+
Sbjct: 684 IVPVVPIVPVSRSIECACRCTRVQVPLRLAWGMTIHKCQGMTV 726
>SB_28309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 34.7 bits (76), Expect = 0.069
Identities = 14/34 (41%), Positives = 26/34 (76%)
Query: 197 FKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKS 230
++R Q P K+A+++TI+K++G TL A +++ KS
Sbjct: 339 YERQQLPFKLAWSLTIHKSEGITLPKAWVDIGKS 372
>SB_50259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 713
Score = 34.3 bits (75), Expect = 0.091
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 198 KRLQFPLKIAFAMTINKAQGQTLKVAGINLEKS 230
+R Q P K+A+++TI+K+QG TL A +++ KS
Sbjct: 418 ERQQLPRKLAWSLTIHKSQGLTLPKAWVDIGKS 450
>SB_28626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 178 GENVLIPRIPIIPT-DLPFQFKRLQFPLKIAFAMTINKAQGQTL 220
G+ ++P +P+ + + + R+Q PL++A+ MTI+K QG T+
Sbjct: 890 GDPQVVPIVPVSRSIECACRCTRVQVPLRLAWGMTIHKCQGMTV 933
>SB_36343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 186 IPIIPTDLPFQFK----RLQFPLKIAFAMTINKAQGQTL 220
+PI+P + R+Q PL++A+ MTI+K QG T+
Sbjct: 150 VPIVPVSRSIECACRCTRVQVPLRLAWGMTIHKCQGMTV 188
>SB_36931| Best HMM Match : FabA (HMM E-Value=5.5)
Length = 702
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 197 FKRLQFPLKIAFAMTINKAQGQTL 220
FKR P+ + +A+TI KAQGQTL
Sbjct: 631 FKRTVLPVVLGYAITICKAQGQTL 654
>SB_29469| Best HMM Match : UCH (HMM E-Value=6.7e-06)
Length = 757
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 153 NGTRLQVTHLGRNIVKAIIMTGMAKGENVLIPRIP 187
NG RL+V+ GR I + I+ G + GE + P +P
Sbjct: 578 NGKRLRVSQCGREIER--ILKGQSSGEELSAPEVP 610
>SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/22 (50%), Positives = 20/22 (90%)
Query: 199 RLQFPLKIAFAMTINKAQGQTL 220
R QFP+++++A+T+++AQG TL
Sbjct: 837 RRQFPIQLSWAITVHEAQGLTL 858
>SB_40864| Best HMM Match : Pox_G5 (HMM E-Value=0.48)
Length = 518
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 196 QFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKS 230
Q QFPL+ A A TI++ QG TL A ++ S
Sbjct: 244 QILHRQFPLRPAAAKTIHRCQGNTLDSAVVDFPTS 278
>SB_55122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 199 RLQFPLKIAFAMTINKAQGQTLKVAGINLE 228
R QFPL+ A A TI+++QG T +N E
Sbjct: 136 RKQFPLRPAAAKTIHRSQGDTESRIVVNFE 165
>SB_10124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 199 RLQFPLKIAFAMTINKAQGQTLKVAGINLE 228
R QFPL+ A A TI+++QG T +N E
Sbjct: 229 RKQFPLRPAAAKTIHRSQGDTESRIVVNFE 258
>SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19)
Length = 2253
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 199 RLQFPLKIAFAMTINKAQGQTLKVAGINLE 228
R QFPL+ A A TI+++QG T +N E
Sbjct: 136 RKQFPLRPAAAKTIHRSQGDTESRIVVNFE 165
>SB_11635| Best HMM Match : Borrelia_P13 (HMM E-Value=9.9)
Length = 295
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 199 RLQFPLKIAFAMTINKAQGQTLKVAGINLE 228
R QFPL+ A A TI+++QG T +N E
Sbjct: 136 RKQFPLRPAAAKTIHRSQGDTESRIVVNFE 165
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/119 (21%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 43 VVHNPDDLNNFVYSELLTNMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLS- 101
VV PDD + V E L +NR + + + Q+++ ++ + + S
Sbjct: 346 VVCLPDDFGDLVNLEWLDVGQNRIEMLPDSFCNLSKLWFLQLSKNHLTELPENFGNLTSL 405
Query: 102 VDTVMDTEQVTSYPVEFLNSLELSGVPSHKLRLKVGVPVLLMRNLDAPRL-CNGTRLQV 159
V+ +D+ Q++S P F N + + ++ +L +P +L++ + RL +G +L++
Sbjct: 406 VELRLDSNQLSSLPASFANLTNVKTLDLYRNKLS-EIPRVLLKLENLMRLDLDGNKLKI 463
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 101 SVDTVMDTEQVTSYPVEFLNSLELSGVPSHKLRLKVGVPVLLMRNLDAPRL 151
SV++ ++V V F L+LSG L L VG PVLL ++D P L
Sbjct: 114 SVESPQLRQEVLEVSVGFPVLLDLSGGIPVLLDLSVGHPVLLEVSVDLPVL 164
>SB_46623| Best HMM Match : LEA_2 (HMM E-Value=9.9)
Length = 196
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 101 SVDTVMDTEQVTSYPVEFLNSLELSGVPSHKLRLKVGVPVLLMRNLDAPRL 151
SV++ ++V V F L+LSG L L VG PVLL ++D P L
Sbjct: 34 SVESPQLRQEVLEVSVGFPVLLDLSGGIPVLLDLSVGHPVLLEVSVDLPVL 84
>SB_20782| Best HMM Match : OGFr_III (HMM E-Value=2.5)
Length = 251
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 93 EGDIVEFLSVDTVMDTEQVTSYPVEFLNSLELSGVP 128
EGDIV S V +TE T+ +E+L L + +P
Sbjct: 30 EGDIVPKSSAAAVQETEAETNDIIEYLRRLSKTTIP 65
>SB_11653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1867
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 44 VHNPDDLNNFVYSELLTNMRNRDWLCERAILAPTNEMVGQIN 85
V N DL+N YS+LL E+ + P N QIN
Sbjct: 219 VRNTTDLSNVTYSDLLLPEARCSISNEKGYICPANFYCAQIN 260
>SB_6818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1784
Score = 27.9 bits (59), Expect = 7.9
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 90 SRVEGDIVEFLSVDTVMDTEQVTSYPVEFLNSLELSGVPSHKLRLKVGVPVLLMRNLDAP 149
S+V+G+I+E L +V QVT Y V + + G S+ + L+ + ++
Sbjct: 712 SQVKGNILELLGAVSVESLPQVTKYAVLGSETTKQEGRLSNTTQR--NAVKLIQKTVNC- 768
Query: 150 RLCNGTRLQVTHLGRNIVKAIIMTGMAKGENVLIPRIPIIPTDLPFQFKRLQFPLKIAFA 209
+ N T + + + ++VK + + NVL+ IP D+ ++ + + FA
Sbjct: 769 -MSNLTTSRSSGVDADVVKNVAEVFIDGISNVLMSSIPDDEVDVSYECANVSQTIARTFA 827
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.137 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,174,000
Number of Sequences: 59808
Number of extensions: 281632
Number of successful extensions: 574
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 549
Number of HSP's gapped (non-prelim): 26
length of query: 240
length of database: 16,821,457
effective HSP length: 80
effective length of query: 160
effective length of database: 12,036,817
effective search space: 1925890720
effective search space used: 1925890720
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)
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