GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001822-TA|BGIBMGA001822-PA|IPR010285|Protein of unknown
function DUF889, eukaryote
         (240 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058641-1|AAL13870.1|  663|Drosophila melanogaster LD34105p pro...    45   1e-04
AE014134-611|AAF51102.1|  663|Drosophila melanogaster CG3238-PA ...    45   1e-04
AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p pro...    29   5.7  
AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA...    29   5.7  

>AY058641-1|AAL13870.1|  663|Drosophila melanogaster LD34105p
           protein.
          Length = 663

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 20/199 (10%)

Query: 37  DREFCNVVHNP--DDLNNFVYSELLTNMRNR---DWLCERAILAPTNEMVGQINEQIMSR 91
           D EF  ++++     +N+ + S L    + +   + +    + + TN+    INE  +  
Sbjct: 390 DPEFVKILNHLRIGHVNDSITSRLAATSKQKIEGNGILATQLCSHTND-ANSINESKLEN 448

Query: 92  VEGDIVEFLSVDTVMDTEQVTSYPVEFLNSLELSGVPSHKLRLKVGVPVLLMRNLDAPR- 150
           ++GD + F + D+     +     ++          PS +L LKV   V+L++N++    
Sbjct: 449 LDGDKILFKADDSDASMTRTLDQQIQ---------APS-QLYLKVNAQVMLLKNINISNG 498

Query: 151 LCNGTRLQVTHLGRNIVKAIIMTGMAKGENVLIPRIPIIPTDLPFQFKRLQFPLKIAFAM 210
           L NG R  V  + +++    ++      E V      II T       R Q PLK+A+A 
Sbjct: 499 LVNGARGVVVRMEKDLP---VVRFKNNQEYVCKHERWIIKTASGNHITRRQVPLKLAWAF 555

Query: 211 TINKAQGQTLKVAGINLEK 229
           +I+K+QG TL    ++L K
Sbjct: 556 SIHKSQGLTLDCVEMSLSK 574


>AE014134-611|AAF51102.1|  663|Drosophila melanogaster CG3238-PA
           protein.
          Length = 663

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 20/199 (10%)

Query: 37  DREFCNVVHNP--DDLNNFVYSELLTNMRNR---DWLCERAILAPTNEMVGQINEQIMSR 91
           D EF  ++++     +N+ + S L    + +   + +    + + TN+    INE  +  
Sbjct: 390 DPEFVKILNHLRIGHVNDSITSRLAATSKQKIEGNGILATQLCSHTND-ANSINESKLEN 448

Query: 92  VEGDIVEFLSVDTVMDTEQVTSYPVEFLNSLELSGVPSHKLRLKVGVPVLLMRNLDAPR- 150
           ++GD + F + D+     +     ++          PS +L LKV   V+L++N++    
Sbjct: 449 LDGDKILFKADDSDASMTRTLDQQIQ---------APS-QLYLKVNAQVMLLKNINISNG 498

Query: 151 LCNGTRLQVTHLGRNIVKAIIMTGMAKGENVLIPRIPIIPTDLPFQFKRLQFPLKIAFAM 210
           L NG R  V  + +++    ++      E V      II T       R Q PLK+A+A 
Sbjct: 499 LVNGARGVVVRMEKDLP---VVRFKNNQEYVCKHERWIIKTASGNHITRRQVPLKLAWAF 555

Query: 211 TINKAQGQTLKVAGINLEK 229
           +I+K+QG TL    ++L K
Sbjct: 556 SIHKSQGLTLDCVEMSLSK 574


>AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p protein.
          Length = 2019

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 67   WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDT 108
            W C   +         Q+   I+ R    IV +++ DTV+DT
Sbjct: 1259 WTCRHYLKVWPTRQFAQLPPDILGRCRQQIVAYMTSDTVLDT 1300


>AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA
            protein.
          Length = 2019

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 67   WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDT 108
            W C   +         Q+   I+ R    IV +++ DTV+DT
Sbjct: 1259 WTCRHYLKVWPTRQFAQLPPDILGRCRQQIVAYMTSDTVLDT 1300


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.137    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,630,949
Number of Sequences: 52641
Number of extensions: 432949
Number of successful extensions: 934
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 930
Number of HSP's gapped (non-prelim): 4
length of query: 240
length of database: 24,830,863
effective HSP length: 83
effective length of query: 157
effective length of database: 20,461,660
effective search space: 3212480620
effective search space used: 3212480620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)