GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001820-TA|BGIBMGA001820-PA|undefined
         (424 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    24   2.3  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   3.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   3.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   3.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   3.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   3.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   3.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   3.1  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 226 PGKPEGSKKTGNDNDDETDSKGKKVTEDRGESFNKNRSEGAERGTP 271
           PGKP  S  + N +   + +     TE  G   N N S+ ++   P
Sbjct: 154 PGKPATSTTSQNLSSPASSTSSTSSTEKAGT--NNNNSKSSQSSNP 197


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 255 GESFNKNRSEGAERGTPCKNKGNS 278
           G++F  + +  A+ G P K  GNS
Sbjct: 264 GKTFTLSSASNAKLGAPVKGAGNS 287


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 226 PGKPEGSKKTGNDNDDETDSKGKKVTEDRGESFNKNRSEGAERGTP 271
           PGKP  S  + N +   + +     TE  G   N N S+  +   P
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGT--NNNNSKSGQSSNP 197


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 226 PGKPEGSKKTGNDNDDETDSKGKKVTEDRGESFNKNRSEGAERGTP 271
           PGKP  S  + N +   + +     TE  G   N N S+  +   P
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGT--NNNNSKSGQSSNP 197


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 226 PGKPEGSKKTGNDNDDETDSKGKKVTEDRGESFNKNRSEGAERGTP 271
           PGKP  S  + N +   + +     TE  G   N N S+  +   P
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGT--NNNNSKSGQSSNP 197


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 226 PGKPEGSKKTGNDNDDETDSKGKKVTEDRGESFNKNRSEGAERGTP 271
           PGKP  S  + N +   + +     TE  G   N N S+  +   P
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGT--NNNNSKSGQSSNP 197


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 226 PGKPEGSKKTGNDNDDETDSKGKKVTEDRGESFNKNRSEGAERGTP 271
           PGKP  S  + N +   + +     TE  G   N N S+  +   P
Sbjct: 110 PGKPATSTASQNLSSPASSTSSTSSTEKAGT--NNNNSKSGQSSNP 153


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 226 PGKPEGSKKTGNDNDDETDSKGKKVTEDRGESFNKNRSEGAERGTP 271
           PGKP  S  + N +   + +     TE  G   N N S+  +   P
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGT--NNNNSKSGQSSNP 197


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 226 PGKPEGSKKTGNDNDDETDSKGKKVTEDRGESFNKNRSEGAERGTP 271
           PGKP  S  + N +   + +     TE  G   N N S+  +   P
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGT--NNNNSKSGQSSNP 197


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.294    0.120    0.326 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,149
Number of Sequences: 317
Number of extensions: 3042
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 424
length of database: 114,650
effective HSP length: 59
effective length of query: 365
effective length of database: 95,947
effective search space: 35020655
effective search space used: 35020655
T: 11
A: 40
X1: 17 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 44 (21.7 bits)
S2: 44 (21.8 bits)