Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001820-TA|BGIBMGA001820-PA|undefined
(424 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 44 6e-06
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 25 3.0
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 24 6.8
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 24 9.0
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 44.4 bits (100), Expect = 6e-06
Identities = 52/253 (20%), Positives = 85/253 (33%), Gaps = 22/253 (8%)
Query: 63 GSRKPERPGKPEGSKKTGNDNDDETDSKG--KKVTEDRGESSTXXXXXXXXXPEGSRKPE 120
GS E G P+ K+ G ++ G +K E S EGSRK +
Sbjct: 924 GSGGEEGSGAPKERKRKGEKKPRKSQGGGGSRKRKEKARRGSGGDSDSEEEEGEGSRKRK 983
Query: 121 RPGKPEGSKKTGNDNDDETDSKGK-----KVTEDRGESSTXXXXXXXXXPEGSRKPERPG 175
+ G G KK D+ K K K T ES + + S
Sbjct: 984 KKGASGGQKKRQKAMDEGLSQKQKGRILSKATVSTSESDSDDSRLKIASGDESGGESGAP 1043
Query: 176 KPEGSKKTGNDNDDETDSKGKKVTEDR-GESSTXXXXXXXXXPEGSR------------- 221
+ ++ +D +D S+ + + R G S GSR
Sbjct: 1044 ATKRKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRSRSGSGSRAGSRAGSGSRSRSRSRS 1103
Query: 222 -KPERPGKPEGSKKTGNDNDDETDSKGKKVTEDRGESFNKNRSEGAERGTPCKNKGNSDG 280
R G +GS+ + S+ + + + K+ S R ++G+
Sbjct: 1104 RSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAGSRKSGSRSRSRSGSQASRGSRRS 1163
Query: 281 KSRSTDNSGTQSQ 293
+SRS SG++S+
Sbjct: 1164 RSRSRSRSGSRSR 1176
Score = 41.9 bits (94), Expect = 3e-05
Identities = 47/229 (20%), Positives = 74/229 (32%), Gaps = 14/229 (6%)
Query: 62 EGSRKPERPGKPEGSKKTGNDNDDETDSKGK-----KVTEDRGESSTXXXXXXXXXPEGS 116
EGSRK ++ G G KK D+ K K K T ES + G
Sbjct: 977 EGSRKRKKKGASGGQKKRQKAMDEGLSQKQKGRILSKATVSTSESDSDDSRLKIA--SGD 1034
Query: 117 RKPERPGKPEGSKKTGNDNDDETDSKGKKVTEDRGESSTXXXXXXXXXPEGSRKPERPGK 176
G P +K +D+E ++ + R S + GSR R G
Sbjct: 1035 ESGGESGAPATKRKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRSRSG-SGSRAGSRAG- 1092
Query: 177 PEGSKKTGNDNDDETDSKGKKVTEDRGESSTXXXXXXXXXPEGSRKPERPGKPEGSKKTG 236
GS+ + S+ R S + SR + GS+
Sbjct: 1093 -SGSRSRSRSR-SRSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAGSRKSGSRSRS 1150
Query: 237 NDNDDETDSKGKKVTEDRGESFNKNRS---EGAERGTPCKNKGNSDGKS 282
+ + + R S +++RS G+ + +P K S +S
Sbjct: 1151 RSGSQASRGSRRSRSRSRSRSGSRSRSRSGSGSRQASPISRKSVSGSES 1199
Score = 31.9 bits (69), Expect = 0.034
Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 5/111 (4%)
Query: 177 PEGSKKTGNDNDD---ETDSKGKKVTEDRGESSTXXXXXXXXXP-EGSRKPERPGKPEGS 232
PE KK G D ++D+ G +V G +G +KP + GS
Sbjct: 895 PEAKKKGGRGRKDYISDSDASGGEVGGGGGSGGEEGSGAPKERKRKGEKKPRKSQGGGGS 954
Query: 233 KKTGNDNDDETDSKGKKVTEDRGESFNKNRSEGAERGTPCKNKGNSDGKSR 283
+K + E+ GE K + +GA G + K +G S+
Sbjct: 955 RKR-KEKARRGSGGDSDSEEEEGEGSRKRKKKGASGGQKKRQKAMDEGLSQ 1004
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 25.4 bits (53), Expect = 3.0
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 230 EGSKKTGNDNDDETDSKGKK-VTEDRGES----FNKNRSEGAERG------TPCKNKGNS 278
EG+ KT N+N++ ++ T + G S N + G+ G T N GN
Sbjct: 92 EGTGKTNNNNNNNNNNGSNTGATVNSGSSNAALSNSSVLNGSNSGSATTTTTTPTNPGNG 151
Query: 279 DGKSRSTDNSGTQS 292
+G S + +NS + S
Sbjct: 152 NGGSNNNNNSNSSS 165
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 24.2 bits (50), Expect = 6.8
Identities = 13/45 (28%), Positives = 15/45 (33%)
Query: 80 GNDNDDETDSKGKKVTEDRGESSTXXXXXXXXXPEGSRKPERPGK 124
G D+ K+ TE ES RKP RP K
Sbjct: 305 GPSTDEPRTVTRKRTTESDVESDASSSSMNSFTMVAKRKPGRPSK 349
Score = 24.2 bits (50), Expect = 6.8
Identities = 13/45 (28%), Positives = 15/45 (33%)
Query: 132 GNDNDDETDSKGKKVTEDRGESSTXXXXXXXXXPEGSRKPERPGK 176
G D+ K+ TE ES RKP RP K
Sbjct: 305 GPSTDEPRTVTRKRTTESDVESDASSSSMNSFTMVAKRKPGRPSK 349
Score = 24.2 bits (50), Expect = 6.8
Identities = 13/45 (28%), Positives = 15/45 (33%)
Query: 184 GNDNDDETDSKGKKVTEDRGESSTXXXXXXXXXPEGSRKPERPGK 228
G D+ K+ TE ES RKP RP K
Sbjct: 305 GPSTDEPRTVTRKRTTESDVESDASSSSMNSFTMVAKRKPGRPSK 349
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.8 bits (49), Expect = 9.0
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 62 EGSRKPERPGKPEGSKKTGNDN-DDETDSKGKK 93
+GS KP+ +P +G DN +D D G +
Sbjct: 1347 DGSEKPKNAIEPSQEAVSGTDNANDSGDKPGSR 1379
Score = 23.8 bits (49), Expect = 9.0
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 114 EGSRKPERPGKPEGSKKTGNDN-DDETDSKGKK 145
+GS KP+ +P +G DN +D D G +
Sbjct: 1347 DGSEKPKNAIEPSQEAVSGTDNANDSGDKPGSR 1379
Score = 23.8 bits (49), Expect = 9.0
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 166 EGSRKPERPGKPEGSKKTGNDN-DDETDSKGKK 197
+GS KP+ +P +G DN +D D G +
Sbjct: 1347 DGSEKPKNAIEPSQEAVSGTDNANDSGDKPGSR 1379
Score = 23.8 bits (49), Expect = 9.0
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 218 EGSRKPERPGKPEGSKKTGNDN-DDETDSKGKK 249
+GS KP+ +P +G DN +D D G +
Sbjct: 1347 DGSEKPKNAIEPSQEAVSGTDNANDSGDKPGSR 1379
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.294 0.120 0.326
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 335,958
Number of Sequences: 2123
Number of extensions: 13597
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 13
length of query: 424
length of database: 516,269
effective HSP length: 66
effective length of query: 358
effective length of database: 376,151
effective search space: 134662058
effective search space used: 134662058
T: 11
A: 40
X1: 17 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 44 (21.7 bits)
S2: 49 (23.8 bits)
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