GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001819-TA|BGIBMGA001819-PA|undefined
         (188 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    23   1.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   1.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   1.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   2.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   2.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   4.7  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 31  PIQGHRKYHAKHGKTNSGPLDSLIFVGILRIAICSKEKKLTTLLRDSPNI 80
           P++G R  H   G+T S P D+L    I  I+       L T L   PN+
Sbjct: 79  PMKG-RLLHDLKGRTTSVPYDALTGQCIYSISRDYLNNVLLTELEKYPNV 127


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 31  PIQGHRKYHAKHGKTNSGPLDSLIFVGILRIAICSKEKKLTTLLRDSPNI 80
           P++G R  H   G+T S P D+L    I  I+       L T L   PN+
Sbjct: 79  PMKG-RLLHDLKGRTTSVPYDALTGQCIYSISRDYLNNVLLTELEKYPNV 127


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 31  PIQGHRKYHAKHGKTNSGPLDSLIFVGILRIAICSKEKKLTTLLRDSPNI 80
           P++G R  H   G+T S P D+L    I  I+       L T L   PN+
Sbjct: 79  PMKG-RLLHDLKGRTTSVPYDALTGQCIYSISRDYLNNVLLTELEKYPNV 127


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/21 (52%), Positives = 13/21 (61%)

Query: 163 CTVLFVGLTQFIVNQLRKKVL 183
           C+VL V LT F     RKK+L
Sbjct: 77  CSVLLVFLTYFFNILFRKKLL 97


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/21 (52%), Positives = 13/21 (61%)

Query: 163 CTVLFVGLTQFIVNQLRKKVL 183
           C+VL V LT F     RKK+L
Sbjct: 73  CSVLLVFLTYFFNILFRKKLL 93


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 56  VGILRIAICSKEKKLTTLLRDSPNICHPEFGTKWGWSKLTGKFESYKEIIKF 107
           + I  I I       + L++ +PNIC+        + K T +    KE++ F
Sbjct: 299 IQIFGIMITKACMSASNLIQRTPNICYKLLSNLGIFPKTTNEQLLRKELLLF 350


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.140    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,645
Number of Sequences: 317
Number of extensions: 1746
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 188
length of database: 114,650
effective HSP length: 53
effective length of query: 135
effective length of database: 97,849
effective search space: 13209615
effective search space used: 13209615
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 41 (20.6 bits)