Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001818-TA|BGIBMGA001818-PA|IPR007230|Peptidase S59,
nucleoporin
(1803 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 27 0.88
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 26 2.0
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 26 2.7
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 26 2.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 26 2.7
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 26 2.7
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 26 2.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 26 2.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 26 2.7
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 24 8.2
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 24 8.2
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 24 8.2
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 24 8.2
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 24 8.2
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.5 bits (58), Expect = 0.88
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 642 SSGPGRTQDSVDQVDRSADVNRNKSTADTEENG-DLHPDKHSRWINSPKISDLWTERDH 699
+S PG+ S + S+ + ST+ TE+ G + + K S+ N P+I W +R H
Sbjct: 151 TSPPGKPATSTTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQSSNPPQIYP-WMKRVH 208
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 26.2 bits (55), Expect = 2.0
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 627 DGQDEGRTNRSFEQPSSGPGRTQDSVDQVDRSADVNRNKSTAD-TEENGDLHPDKHSRWI 685
DG+DE R++ + + S +S ++ S N+N S AD + G + P H+
Sbjct: 26 DGEDEKRSSENLTEEKSSLIDLTESEEKSGGSYSSNKNVSRADHSPVFGKVEPVPHTSSF 85
Query: 686 N 686
N
Sbjct: 86 N 86
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.8 bits (54), Expect = 2.7
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 642 SSGPGRTQDSVDQVDRSADVNRNKSTADTEENGDLHPDKHSRWINSPKISDLWTERDH 699
+S PG+ S + S+ + ST+ TE+ G + + S ++P W +R H
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVH 208
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 25.8 bits (54), Expect = 2.7
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 642 SSGPGRTQDSVDQVDRSADVNRNKSTADTEENGDLHPDKHSRWINSPKISDLWTERDH 699
+S PG+ S + S+ + ST+ TE+ G + + S ++P W +R H
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVH 208
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.8 bits (54), Expect = 2.7
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 642 SSGPGRTQDSVDQVDRSADVNRNKSTADTEENGDLHPDKHSRWINSPKISDLWTERDH 699
+S PG+ S + S+ + ST+ TE+ G + + S ++P W +R H
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVH 208
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 25.8 bits (54), Expect = 2.7
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 642 SSGPGRTQDSVDQVDRSADVNRNKSTADTEENGDLHPDKHSRWINSPKISDLWTERDH 699
+S PG+ S + S+ + ST+ TE+ G + + S ++P W +R H
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVH 208
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 25.8 bits (54), Expect = 2.7
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 642 SSGPGRTQDSVDQVDRSADVNRNKSTADTEENGDLHPDKHSRWINSPKISDLWTERDH 699
+S PG+ S + S+ + ST+ TE+ G + + S ++P W +R H
Sbjct: 107 TSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVH 164
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 25.8 bits (54), Expect = 2.7
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 642 SSGPGRTQDSVDQVDRSADVNRNKSTADTEENGDLHPDKHSRWINSPKISDLWTERDH 699
+S PG+ S + S+ + ST+ TE+ G + + S ++P W +R H
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVH 208
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 25.8 bits (54), Expect = 2.7
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 642 SSGPGRTQDSVDQVDRSADVNRNKSTADTEENGDLHPDKHSRWINSPKISDLWTERDH 699
+S PG+ S + S+ + ST+ TE+ G + + S ++P W +R H
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVH 208
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 24.2 bits (50), Expect = 8.2
Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 3/104 (2%)
Query: 627 DGQDEGRTNRSFEQPSSGPGRTQDSVDQVDRSADVNRNKSTADTEENGDLHPDKHSRWIN 686
D + ++ + E PS+G + D + + + N N +A + + +
Sbjct: 93 DDEMSKKSCQGCEMPSAGLCGSHDEIPDISSTRGNNNNTPSATNNNTNFNNNSNGASSVG 152
Query: 687 SPKISDLWTERDHKPDAQRTNRMYPDIEKE---VSEHISERRAS 727
S D E D + + + P I K+ VS + RR S
Sbjct: 153 SSSPFDKLIEEDSRSNEDTSLHPSPRITKKANSVSVKVENRRNS 196
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 24.2 bits (50), Expect = 8.2
Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Query: 1624 YEHQPALEVEHLLAARQWSAAHRVLLDELLPDAVLNDDLQTVSRLLKTLEEAAERHEVAD 1683
Y H P L + +AAH LL +P + D + EA R +
Sbjct: 105 YNHSPHLSHMQFMQLPHPAAAHSALLSPAMPHNLTRHDGSVIKNQGMPTMEAIARSGI-- 162
Query: 1684 WES 1686
WE+
Sbjct: 163 WEN 165
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 24.2 bits (50), Expect = 8.2
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 543 LLPDSTTAAEDILKPTNPLALKAVLDGSHSAYRINSPTSRVQPRQLPVHK 592
L+ AA + PTNP L A++ NSP S P +LP K
Sbjct: 37 LMASHLMAASRLSLPTNPAFFHPGL--LPLAWQANSPPSPPAPSELPALK 84
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 24.2 bits (50), Expect = 8.2
Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 3/104 (2%)
Query: 627 DGQDEGRTNRSFEQPSSGPGRTQDSVDQVDRSADVNRNKSTADTEENGDLHPDKHSRWIN 686
D + ++ + E PS+G + D + + + N N +A + + +
Sbjct: 41 DDEMSKKSCQGCEMPSAGLCGSHDEIPDISSTRGNNNNTPSATNNNTNFNNNSNGASSVG 100
Query: 687 SPKISDLWTERDHKPDAQRTNRMYPDIEKE---VSEHISERRAS 727
S D E D + + + P I K+ VS + RR S
Sbjct: 101 SSSPFDKLIEEDSRSNEDTSLHPSPRITKKANSVSVKVENRRNS 144
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 24.2 bits (50), Expect = 8.2
Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 3/104 (2%)
Query: 627 DGQDEGRTNRSFEQPSSGPGRTQDSVDQVDRSADVNRNKSTADTEENGDLHPDKHSRWIN 686
D + ++ + E PS+G + D + + + N N +A + + +
Sbjct: 224 DDEMSKKSCQGCEMPSAGLCGSHDEIPDISSTRGNNNNTPSATNNNTNFNNNSNGASSVG 283
Query: 687 SPKISDLWTERDHKPDAQRTNRMYPDIEKE---VSEHISERRAS 727
S D E D + + + P I K+ VS + RR S
Sbjct: 284 SSSPFDKLIEEDSRSNEDTSLHPSPRITKKANSVSVKVENRRNS 327
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.315 0.132 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 358,953
Number of Sequences: 317
Number of extensions: 14169
Number of successful extensions: 70
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 61
Number of HSP's gapped (non-prelim): 14
length of query: 1803
length of database: 114,650
effective HSP length: 67
effective length of query: 1736
effective length of database: 93,411
effective search space: 162161496
effective search space used: 162161496
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)
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