GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001818-TA|BGIBMGA001818-PA|IPR007230|Peptidase S59,
nucleoporin
         (1803 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062190-1|AAL58551.1|  151|Anopheles gambiae cytochrome P450 CY...    29   1.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    27   5.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   7.8  
AY062196-1|AAL58557.1|  151|Anopheles gambiae cytochrome P450 CY...    26   7.8  

>AY062190-1|AAL58551.1|  151|Anopheles gambiae cytochrome P450
           CYP4H15 protein.
          Length = 151

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 896 IGRKNYGNVYYDSEIDVAGLDLDALVHFLNKEVIVYPEDSDKPP 939
           IGR++ G++  D      G+D   L++ L+ +  +YPE +   P
Sbjct: 79  IGRRSAGDMLIDGVTIPKGMDFGILIYALHNDPELYPEPARFDP 122


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 45  GSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTS 87
           GS N+  + SS   G    + +   +T T P  G G   NN +
Sbjct: 118 GSSNAALSNSSVLNGSNSGSATTTTTTPTNPGNGNGGSNNNNN 160


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 3/47 (6%)

Query: 43  GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGG 89
           GGG+   G   S   GG   + GS G   S  P  GGG   ++  GG
Sbjct: 672 GGGAVGGG---SGAGGGAGSSGGSGGGLASGSPYGGGGHHLSHHHGG 715


>AY062196-1|AAL58557.1|  151|Anopheles gambiae cytochrome P450
           CYP4D17 protein.
          Length = 151

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 896 IGRKNYGNVYYDSEIDVAGLDLDALVHFLNKEVIVYPEDSDKPPVGVGLNRRA 948
           IGRK       + +I  AG +L  +  FL +E   +PE     P    + R A
Sbjct: 78  IGRKMQQTAEINGKIIPAGANLIIMPFFLGREARYFPEPEKFDPERFNVERSA 130


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.132    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,638,323
Number of Sequences: 2123
Number of extensions: 64525
Number of successful extensions: 152
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 141
Number of HSP's gapped (non-prelim): 16
length of query: 1803
length of database: 516,269
effective HSP length: 74
effective length of query: 1729
effective length of database: 359,167
effective search space: 620999743
effective search space used: 620999743
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)