Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001818-TA|BGIBMGA001818-PA|IPR007230|Peptidase S59,
nucleoporin
(1803 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50193-4|AAP68917.1| 492|Caenorhabditis elegans Nuclear pore co... 96 2e-19
U50193-3|AAP68918.1| 1189|Caenorhabditis elegans Nuclear pore co... 96 2e-19
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 55 4e-07
AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical ... 45 6e-04
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 41 0.007
Z11126-7|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 41 0.007
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 38 0.050
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 38 0.087
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 38 0.087
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 38 0.087
AF125459-13|AAD12833.1| 605|Caenorhabditis elegans Hypothetical... 37 0.15
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 36 0.20
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 36 0.35
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 36 0.35
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 36 0.35
AL110487-17|CAH10818.1| 304|Caenorhabditis elegans Hypothetical... 35 0.47
AL110487-16|CAH10817.1| 307|Caenorhabditis elegans Hypothetical... 35 0.47
AL110487-15|CAB54432.1| 395|Caenorhabditis elegans Hypothetical... 35 0.47
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 35 0.47
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 35 0.47
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 35 0.62
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 35 0.62
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 34 0.81
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 34 0.81
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 34 1.1
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 34 1.1
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 34 1.1
Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical p... 33 1.4
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 33 1.4
Z81094-3|CAB03153.1| 995|Caenorhabditis elegans Hypothetical pr... 33 2.5
Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical p... 31 5.7
Z68014-4|CAA92026.2| 588|Caenorhabditis elegans Hypothetical pr... 31 5.7
U97194-2|AAN84846.1| 806|Caenorhabditis elegans Prion-like-(q/n... 31 5.7
Z46241-3|CAA86317.1| 556|Caenorhabditis elegans Hypothetical pr... 31 7.6
U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated k... 31 7.6
U29612-11|AAO61438.1| 523|Caenorhabditis elegans P21-activated ... 31 7.6
U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated ... 31 7.6
U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated k... 31 7.6
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 31 7.6
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 31 7.6
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 31 7.6
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 31 7.6
D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase ... 31 7.6
>U50193-4|AAP68917.1| 492|Caenorhabditis elegans Nuclear pore
complex protein protein10, isoform a protein.
Length = 492
Score = 96.3 bits (229), Expect = 2e-19
Identities = 43/107 (40%), Positives = 70/107 (65%)
Query: 862 GVKLTRPGYYTIPSLDDMINYMRPDGTCPVPHLTIGRKNYGNVYYDSEIDVAGLDLDALV 921
GVKLT+P Y+++P++++M N ++ LT+GR +YG+VY+ +++ + LD +V
Sbjct: 283 GVKLTKPDYFSLPTINEMKNMIKNGRVVLEDGLTVGRSSYGSVYWPGRVELKDVALDEIV 342
Query: 922 HFLNKEVIVYPEDSDKPPVGVGLNRRAIVTLDRVWPRDKTEKRLITE 968
F ++EV VYP + +K P G LNR A VTL+RVW DK K+ + +
Sbjct: 343 VFRHREVTVYPNEEEKAPEGQELNRPAEVTLERVWYTDKKTKKEVRD 389
>U50193-3|AAP68918.1| 1189|Caenorhabditis elegans Nuclear pore
complex protein protein10, isoform b protein.
Length = 1189
Score = 96.3 bits (229), Expect = 2e-19
Identities = 43/107 (40%), Positives = 70/107 (65%)
Query: 862 GVKLTRPGYYTIPSLDDMINYMRPDGTCPVPHLTIGRKNYGNVYYDSEIDVAGLDLDALV 921
GVKLT+P Y+++P++++M N ++ LT+GR +YG+VY+ +++ + LD +V
Sbjct: 283 GVKLTKPDYFSLPTINEMKNMIKNGRVVLEDGLTVGRSSYGSVYWPGRVELKDVALDEIV 342
Query: 922 HFLNKEVIVYPEDSDKPPVGVGLNRRAIVTLDRVWPRDKTEKRLITE 968
F ++EV VYP + +K P G LNR A VTL+RVW DK K+ + +
Sbjct: 343 VFRHREVTVYPNEEEKAPEGQELNRPAEVTLERVWYTDKKTKKEVRD 389
Score = 50.0 bits (114), Expect = 2e-05
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Query: 1555 AEQLEAGGAWQLATAVLAYHPHGAARSSLVRSMISRHAPSSGSAPGLQLLERIGVPEKWI 1614
+ QLEA + A VL + RS+ VRS++ R A + + + E+ +P +WI
Sbjct: 961 SSQLEASSLSKYALFVLQHIDDDEERSTAVRSLLDRIARFTDNDMFDSISEQFDIPSEWI 1020
Query: 1615 HLARAHRAKYEHQPALEVEHLLAARQWSAAHRVLLDELLPDAVL---NDDLQTVSRLLKT 1671
A+ AK E +AA+ + R+ +D++ P AV+ +D L+ +++
Sbjct: 1021 ADAQFSIAKSVDDSTQLFELAVAAKNYLEICRLFVDDIAPTAVVAGDHDALKAACAMVRP 1080
Query: 1672 LEEAAERHEVADWESGGLALSHYIHVCDEIMAIQNEGDQ 1710
E +++ +W + G+ + Y C I I+N+ ++
Sbjct: 1081 FE-----NQIPEWGATGMVYTDY---CRLINLIENDAEE 1111
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 55.2 bits (127), Expect = 4e-07
Identities = 52/204 (25%), Positives = 67/204 (32%), Gaps = 19/204 (9%)
Query: 34 NKSLGMVMCGGGSFNSGATTSSPFGGFKPATGS---FGASTSTQPATGG-GLFANNTSGG 89
N S GG N+ T FG +P+TGS FG ST+T GG A +
Sbjct: 29 NSSTSTANTGG---NTNTTGGFSFGSAQPSTGSTGLFGNSTATGSMFGGSSAAAPAPASA 85
Query: 90 GLFGNPGPXXXXXXXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFG-NTQATPSFGVKPX 148
G+FGN G + +AG G+FG N A P+ G+
Sbjct: 86 GIFGNSGAAAPAPASTSIFGSSANSAAPATVTFGASAPSAGAGMFGANKPAAPTGGL--- 142
Query: 149 XXXXXXXXXXXXXXXXXXXXPATGPGAGLFAPQGNTMSGGGLFGGNT------SAGAFGQ 202
P +GLF + GGLFG + S G FG
Sbjct: 143 -FGSSTSTATTAPTGGLFGSSTAAPSSGLFGSTAAPAAPGGLFGSTSTSTAAPSGGLFGS 201
Query: 203 Q-QPTGTGHVKFNPVVGTEVVMKN 225
PT T + G N
Sbjct: 202 SAAPTSTAPAPSGGLFGAAPATSN 225
Score = 48.0 bits (109), Expect = 6e-05
Identities = 35/101 (34%), Positives = 42/101 (41%), Gaps = 10/101 (9%)
Query: 50 GATTSSPFGGFKPATGS-FGASTSTQPATGG----GLFANNTSGGGLFGNPGPXXXXXXX 104
GA TS+P PATG FGAST+ ATGG G + +T GLFGN
Sbjct: 282 GAPTSAPSSA--PATGGLFGASTAPAAATGGLFSIGAASASTPSVGLFGNSSASTTAAAA 339
Query: 105 XXXXXXXXXXXX---XXXXXXXXNTSTAGGGLFGNTQATPS 142
TS+ GGLFG+T A P+
Sbjct: 340 PATAPAAASTGGLFGATTAAAAAPTSSTTGGLFGSTAAAPA 380
Score = 46.4 bits (105), Expect = 2e-04
Identities = 54/192 (28%), Positives = 62/192 (32%), Gaps = 31/192 (16%)
Query: 44 GGSFNSGAT-TSSPFGGFKPATGSFGASTSTQPATGGGLF------ANNTSGGGLFGNPG 96
GG F S +T T++P GG GS A TST PA GGLF +N GLFGN
Sbjct: 181 GGLFGSTSTSTAAPSGGL---FGSSAAPTSTAPAPSGGLFGAAPATSNAAPTSGLFGNSA 237
Query: 97 PXXXXXXXXXXXXX------XXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXX 150
P T+TA GLFG + PS
Sbjct: 238 PAATASSGGLFGAAPKPAAPSGGLFGSTAPATTAATTTATSGLFGAPTSAPSSAPATGGL 297
Query: 151 XXXXXXXXXXXXXXXXXXPATG--PGAGLF-------------APQGNTMSGGGLFGGNT 195
A+ P GLF A S GGLFG T
Sbjct: 298 FGASTAPAAATGGLFSIGAASASTPSVGLFGNSSASTTAAAAPATAPAAASTGGLFGATT 357
Query: 196 SAGAFGQQQPTG 207
+A A TG
Sbjct: 358 AAAAAPTSSTTG 369
Score = 46.0 bits (104), Expect = 2e-04
Identities = 48/178 (26%), Positives = 60/178 (33%), Gaps = 25/178 (14%)
Query: 44 GGSFNSGATTSSPFGGFKPATGS--FGASTSTQPATGGGLFANNTS------GGGLFGNP 95
G S NS A + FG P+ G+ FGA+ P GGLF ++TS GGLFG+
Sbjct: 105 GSSANSAAPATVTFGASAPSAGAGMFGANKPAAPT--GGLFGSSTSTATTAPTGGLFGS- 161
Query: 96 GPXXXXXXXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXX 155
+T+ GGLFG++ A S P
Sbjct: 162 -STAAPSSGLFGSTAAPAAPGGLFGSTSTSTAAPSGGLFGSSAAPTSTAPAPSGGLFGAA 220
Query: 156 XXXXXXXXXXXXXPATGPGAGLFAPQGNTMSGGGLFG-----GNTSAGAFGQQQPTGT 208
+ P A T S GGLFG S G FG P T
Sbjct: 221 PATSNAAPTSGLFGNSAPAA--------TASSGGLFGAAPKPAAPSGGLFGSTAPATT 270
Score = 42.7 bits (96), Expect = 0.002
Identities = 52/212 (24%), Positives = 67/212 (31%), Gaps = 29/212 (13%)
Query: 34 NKSLGMVMCGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFG 93
N + GG F + ++P GG FG ST PAT A T+ GLFG
Sbjct: 235 NSAPAATASSGGLFGAAPKPAAPSGGL------FG---STAPATTA---ATTTATSGLFG 282
Query: 94 NP--GPXX--XXXXXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXX 149
P P + ST GLFGN+ A+ + P
Sbjct: 283 APTSAPSSAPATGGLFGASTAPAAATGGLFSIGAASASTPSVGLFGNSSASTTAAAAPAT 342
Query: 150 X-XXXXXXXXXXXXXXXXXXPATGPGAGLF----APQGNTMSGGGLFGGNT--------S 196
P + GLF A ++ GGLFG +T +
Sbjct: 343 APAAASTGGLFGATTAAAAAPTSSTTGGLFGSTAAAPAASLPTGGLFGSSTPAKTPAAPT 402
Query: 197 AGAFGQQQPTGTGHVKFNPVVGTEVVMKNGTS 228
AG FG T T + GT TS
Sbjct: 403 AGLFGASSTTTTSAPATGSLFGTAPATTTATS 434
Score = 42.3 bits (95), Expect = 0.003
Identities = 39/163 (23%), Positives = 50/163 (30%), Gaps = 20/163 (12%)
Query: 57 FGGFKPATGSFGASTSTQPATGGGLFAN------------NTSGGGLFGNPGPXXXXXXX 104
FGG P FG + +T A+ G F N NT+GG FG+ P
Sbjct: 2 FGGSAPKPSIFGGTAATTTASSGFSFGNSSTSTANTGGNTNTTGGFSFGSAQPSTGSTGL 61
Query: 105 XXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXXXX 164
+ A G+FGN+ A
Sbjct: 62 FGNSTATGSMFGGSSAAA---PAPASAGIFGNSGAAAPAPASTSIFGSSANSAAPATVTF 118
Query: 165 XXXXPATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFGQQQPTG 207
P+ GAG+F GGLFG +TS PTG
Sbjct: 119 GASAPSA--GAGMFGANKPAAPTGGLFGSSTSTAT---TAPTG 156
Score = 39.1 bits (87), Expect = 0.029
Identities = 35/162 (21%), Positives = 55/162 (33%), Gaps = 8/162 (4%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXXXXX 102
GG + + A++ FG +T + G +T+T G +T GLFGN
Sbjct: 13 GGTAATTTASSGFSFGNSSTSTANTGGNTNTTGGFSFGSAQPSTGSTGLFGNSTATGSMF 72
Query: 103 XXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXX 162
+ A +FG++ + + P
Sbjct: 73 GGSSAAAPAPASAGIFGNSGAAAPAPASTSIFGSSANSAA----PATVTFGASAPSAGAG 128
Query: 163 XXXXXXPATGPGAGLFAPQGNTMS---GGGLFGGNTSAGAFG 201
PA P GLF +T + GGLFG +T+A + G
Sbjct: 129 MFGANKPA-APTGGLFGSSTSTATTAPTGGLFGSSTAAPSSG 169
Score = 35.1 bits (77), Expect = 0.47
Identities = 43/171 (25%), Positives = 57/171 (33%), Gaps = 17/171 (9%)
Query: 44 GGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXXXXXX 103
GG F + ATT++P P G FGA+T+T PAT G GGLFG
Sbjct: 460 GGLFGA-ATTTAPAAA-APTGGLFGAATTTAPATVG-------PTGGLFGAATTTTPATA 510
Query: 104 XXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXXX 163
TST L +ATP+ G+
Sbjct: 511 ATLGQTPSTVSATPSLPTTTSTTST----LPKPAEATPTLGLGLGLTSTPLAKGTGWTTS 566
Query: 164 XXXXXPATGPGAGLFAPQGNTMS----GGGLFGGNTSAGAFGQQQPTGTGH 210
T G + A +T+S GL G +T A Q+ + H
Sbjct: 567 GLKGAATTSAGLKIGASGSDTLSEEEIKAGLGGNDTKAFFTALQEVVNSYH 617
Score = 34.3 bits (75), Expect = 0.81
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 11/66 (16%)
Query: 306 ANKPPAFG------TSTAGSTLFNTTTTQAPAFGASTNT---FGFG-ANTQNQSTGIFGA 355
A KP FG T+++G + N++T+ A G +TNT F FG A STG+FG
Sbjct: 6 APKPSIFGGTAATTTASSGFSFGNSSTSTANT-GGNTNTTGGFSFGSAQPSTGSTGLFGN 64
Query: 356 KPATGA 361
ATG+
Sbjct: 65 STATGS 70
Score = 31.1 bits (67), Expect = 7.6
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 311 AFGTSTAGSTLFNTTTTQAPAFGASTNTFGFGANTQNQSTGIFGAK-PATGA 361
A + A + +F + APA AST+ FG AN+ +T FGA P+ GA
Sbjct: 77 AAAPAPASAGIFGNSGAAAPA-PASTSIFGSSANSAAPATVTFGASAPSAGA 127
>AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical
protein Y54E5A.4 protein.
Length = 538
Score = 44.8 bits (101), Expect = 6e-04
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 17/160 (10%)
Query: 50 GATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSG--GGLFGN----PGPXXXXXX 103
G +T++P P GS A+ + +P GGLF + GLFG P P
Sbjct: 5 GTSTTAPAASTTPLFGSTAAA-APKP---GGLFGAPAAAMSSGLFGASQTAPAPASAGLF 60
Query: 104 XXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXXX 163
T++ GGLFG AT +
Sbjct: 61 GSTTAPTPASTSSVPLFGSTTTTASPSGGLFGAKTATTAAPAPTGGLFGASTAAPATGSL 120
Query: 164 XXXXXPATGPGAGLFAPQGNTMS----GGGLFGGNTSAGA 199
PATG GLF + T + GGGLFG +T+ A
Sbjct: 121 FGSTAPATG---GLFGAKSTTSAAPTLGGGLFGSSTAPAA 157
Score = 38.3 bits (85), Expect = 0.050
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 317 AGSTLFNTTTTQAPAFGASTNTFGFGANTQNQSTGIFGAKPATGA 361
A + LF +TT PA +S FG T + S G+FGAK AT A
Sbjct: 55 ASAGLFGSTTAPTPASTSSVPLFGSTTTTASPSGGLFGAKTATTA 99
Score = 38.3 bits (85), Expect = 0.050
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 45 GSFNSGATTSSPFGGFKPATGS-FGA--STSTQPATGGGLFANNTS 87
G+ + T S FG PATG FGA +TS P GGGLF ++T+
Sbjct: 109 GASTAAPATGSLFGSTAPATGGLFGAKSTTSAAPTLGGGLFGSSTA 154
Score = 33.5 bits (73), Expect = 1.4
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 44 GGSFNSG-ATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFG 93
GG F + ATT++P P G FGAST+ PATG + + GGLFG
Sbjct: 88 GGLFGAKTATTAAP----APTGGLFGASTAA-PATGSLFGSTAPATGGLFG 133
Score = 31.5 bits (68), Expect = 5.7
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGA--STSTQPATGGGLFANNTSGGGL 91
GGG F S ++ AT SFGA +T+ P GG+ N+SGGGL
Sbjct: 145 GGGLFGSSTAPAAA------ATTSFGAPPATAAAPLGLGGIQQQNSSGGGL 189
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 41.1 bits (92), Expect = 0.007
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 28 GGDHVVNKSLGMVMCGGGSFNSGATTSSPFGGFKPATGSFGAS--TSTQPATGGGLFANN 85
GG + V S G GGGS G S+P GG AT G S +T ++GGG +
Sbjct: 199 GGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGG 258
Query: 86 TSGGG 90
+SGGG
Sbjct: 259 SSGGG 263
Score = 36.7 bits (81), Expect = 0.15
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 28 GGDHVVNKSLGMVMCGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTS 87
GGD + S GG +S +++SS GG+ G GAS+ + ++ GG +++S
Sbjct: 381 GGDSSSSSSSSGGYSGGSDSSSSSSSSS--GGYSSGGGDAGASSGGESSSAGGYSGSSSS 438
Query: 88 GG 89
GG
Sbjct: 439 GG 440
Score = 34.3 bits (75), Expect = 0.81
Identities = 35/165 (21%), Positives = 57/165 (34%), Gaps = 11/165 (6%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXXXXX 102
GG S++ G SS GG G +S + ++GG ++++SGGG + + G
Sbjct: 332 GGSSYSGGGEASSSSGGGYSGGGESSSSGGSSYSSGGD--SSSSSGGG-YSSGGDSSSSS 388
Query: 103 XXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXX 162
++S++GG G A S G +
Sbjct: 389 SSSGGYSGGSDSSSS-------SSSSSGGYSSGGGDAGASSGGESSSAGGYSGSSSSGGE 441
Query: 163 XXXXXXPATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFGQQQPTG 207
+ G AP+ S GG GG+ +A P+G
Sbjct: 442 ASSGGY-SGGSSEPAPAPEAAPASSGGYSGGSEAAPEAAPAAPSG 485
Score = 33.9 bits (74), Expect = 1.1
Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 28 GGDHVVNKSLGMVMCGGGSFNSGATTSSPFGGFK-PATGSFGASTSTQPATGGGLFANNT 86
GG + V S G GGGS G +P GG GS G +GGG +A T
Sbjct: 178 GGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYA--T 235
Query: 87 SGGG 90
SGGG
Sbjct: 236 SGGG 239
Score = 33.5 bits (73), Expect = 1.4
Identities = 30/165 (18%), Positives = 55/165 (33%), Gaps = 3/165 (1%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXXXXX 102
GG S++SG +SS GG + G +S+S+ GG ++++S G
Sbjct: 360 GGSSYSSGGDSSSSSGGGYSSGGDSSSSSSSSGGYSGGSDSSSSSSSSSGGY--SSGGGD 417
Query: 103 XXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXX 162
+++GG G+++ P+ P
Sbjct: 418 AGASSGGESSSAGGYSGSSSSGGEASSGGYSGGSSEPAPAPEAAP-ASSGGYSGGSEAAP 476
Query: 163 XXXXXXPATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFGQQQPTG 207
P+ G AP+ + G + G+ +A P+G
Sbjct: 477 EAAPAAPSGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAPAAPSG 521
Score = 32.3 bits (70), Expect = 3.3
Identities = 41/167 (24%), Positives = 53/167 (31%), Gaps = 10/167 (5%)
Query: 42 CGGGSFNS--GATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXX 99
CGGGS G ++ GG G G ++GGG +A SGGG G G
Sbjct: 139 CGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSG 198
Query: 100 XXXXXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXX 159
++ +GGG + AT G
Sbjct: 199 GGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGY----ATSGGGGSGGYATGGSSGGGY 254
Query: 160 XXXXXXXXXPATGPGAGLFAPQGNTMSGGGLFGGNT-SAGAFGQQQP 205
+TG G G +A G GGG GG S+G G P
Sbjct: 255 SSGGSSGGGYSTGGGGG-YAGGGG--GGGGSSGGYAGSSGGGGYSAP 298
>Z11126-7|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 41.1 bits (92), Expect = 0.007
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 28 GGDHVVNKSLGMVMCGGGSFNSGATTSSPFGGFKPATGSFGAS--TSTQPATGGGLFANN 85
GG + V S G GGGS G S+P GG AT G S +T ++GGG +
Sbjct: 199 GGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGG 258
Query: 86 TSGGG 90
+SGGG
Sbjct: 259 SSGGG 263
Score = 36.7 bits (81), Expect = 0.15
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 28 GGDHVVNKSLGMVMCGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTS 87
GGD + S GG +S +++SS GG+ G GAS+ + ++ GG +++S
Sbjct: 381 GGDSSSSSSSSGGYSGGSDSSSSSSSSS--GGYSSGGGDAGASSGGESSSAGGYSGSSSS 438
Query: 88 GG 89
GG
Sbjct: 439 GG 440
Score = 34.3 bits (75), Expect = 0.81
Identities = 35/165 (21%), Positives = 57/165 (34%), Gaps = 11/165 (6%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXXXXX 102
GG S++ G SS GG G +S + ++GG ++++SGGG + + G
Sbjct: 332 GGSSYSGGGEASSSSGGGYSGGGESSSSGGSSYSSGGD--SSSSSGGG-YSSGGDSSSSS 388
Query: 103 XXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXX 162
++S++GG G A S G +
Sbjct: 389 SSSGGYSGGSDSSSS-------SSSSSGGYSSGGGDAGASSGGESSSAGGYSGSSSSGGE 441
Query: 163 XXXXXXPATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFGQQQPTG 207
+ G AP+ S GG GG+ +A P+G
Sbjct: 442 ASSGGY-SGGSSEPAPAPEAAPASSGGYSGGSEAAPEAAPAAPSG 485
Score = 33.9 bits (74), Expect = 1.1
Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 28 GGDHVVNKSLGMVMCGGGSFNSGATTSSPFGGFK-PATGSFGASTSTQPATGGGLFANNT 86
GG + V S G GGGS G +P GG GS G +GGG +A T
Sbjct: 178 GGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYA--T 235
Query: 87 SGGG 90
SGGG
Sbjct: 236 SGGG 239
Score = 33.5 bits (73), Expect = 1.4
Identities = 30/165 (18%), Positives = 55/165 (33%), Gaps = 3/165 (1%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXXXXX 102
GG S++SG +SS GG + G +S+S+ GG ++++S G
Sbjct: 360 GGSSYSSGGDSSSSSGGGYSSGGDSSSSSSSSGGYSGGSDSSSSSSSSSGGY--SSGGGD 417
Query: 103 XXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXX 162
+++GG G+++ P+ P
Sbjct: 418 AGASSGGESSSAGGYSGSSSSGGEASSGGYSGGSSEPAPAPEAAP-ASSGGYSGGSEAAP 476
Query: 163 XXXXXXPATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFGQQQPTG 207
P+ G AP+ + G + G+ +A P+G
Sbjct: 477 EAAPAAPSGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAPAAPSG 521
Score = 32.3 bits (70), Expect = 3.3
Identities = 41/167 (24%), Positives = 53/167 (31%), Gaps = 10/167 (5%)
Query: 42 CGGGSFNS--GATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXX 99
CGGGS G ++ GG G G ++GGG +A SGGG G G
Sbjct: 139 CGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSG 198
Query: 100 XXXXXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXX 159
++ +GGG + AT G
Sbjct: 199 GGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGY----ATSGGGGSGGYATGGSSGGGY 254
Query: 160 XXXXXXXXXPATGPGAGLFAPQGNTMSGGGLFGGNT-SAGAFGQQQP 205
+TG G G +A G GGG GG S+G G P
Sbjct: 255 SSGGSSGGGYSTGGGGG-YAGGGG--GGGGSSGGYAGSSGGGGYSAP 298
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 38.3 bits (85), Expect = 0.050
Identities = 47/164 (28%), Positives = 54/164 (32%), Gaps = 9/164 (5%)
Query: 44 GGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXXXXXX 103
GG+ GA + P G PA G GAST T A GG +T + G P
Sbjct: 71 GGAPVGGAPAAVPMGAPPPAGG--GASTMT--ALGGAPSGASTM-TAVGGAPRGASTMTA 125
Query: 104 XXXXXXXXXXXXXXXXXXXXXNTSTA-GGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXX 162
+T TA GG G + T G
Sbjct: 126 VGGAPTGASTMTAVGGAPRGASTMTAVGGAPTGASTMTAVGGAPGEASTMTAVGGAPRGA 185
Query: 163 XXXXXXPATGPGAGLF--APQGNTMSGGGLFGGNTSAGAFGQQQ 204
A G GA AP +MSGGG GG TS G FG Q
Sbjct: 186 STMTAVGAPGGGASALGAAPPAGSMSGGGGGGGATS-GYFGVGQ 228
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 37.5 bits (83), Expect = 0.087
Identities = 39/162 (24%), Positives = 47/162 (29%), Gaps = 16/162 (9%)
Query: 44 GGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXXXXXX 103
GG F G S FGG K FG + GGG + GGG G G
Sbjct: 21 GGGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKAGGSGFGGGNTC 80
Query: 104 XXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXXX 163
STA G FG+ + + +FG
Sbjct: 81 GSGFGGGSTGGSPYGGASSGFGGSTATSG-FGSGEKSSAFG---------------GSGG 124
Query: 164 XXXXXPATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFGQQQP 205
G G G F + GG GG + F QQP
Sbjct: 125 FGGSATGFGSGGGSFGGGNSGFGEGGHGGGERNNNCFNCQQP 166
Score = 36.3 bits (80), Expect = 0.20
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 42 CGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFG 93
CG G F G+T SP+GG A+ FG ST+T G G ++ G G FG
Sbjct: 80 CGSG-FGGGSTGGSPYGG---ASSGFGGSTATS-GFGSGEKSSAFGGSGGFG 126
Score = 35.5 bits (78), Expect = 0.35
Identities = 19/54 (35%), Positives = 21/54 (38%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPG 96
GG F G T S FGG K FG + GGG + GG G G
Sbjct: 50 GGSGFGGGNTGGSGFGGGKAGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGG 103
Score = 33.9 bits (74), Expect = 1.1
Identities = 21/66 (31%), Positives = 24/66 (36%)
Query: 28 GGDHVVNKSLGMVMCGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTS 87
GG + G GG F G T S FGG FG + GGG +
Sbjct: 25 GGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKAGGSGFGGGNTCGSGF 84
Query: 88 GGGLFG 93
GGG G
Sbjct: 85 GGGSTG 90
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 37.5 bits (83), Expect = 0.087
Identities = 39/162 (24%), Positives = 47/162 (29%), Gaps = 16/162 (9%)
Query: 44 GGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXXXXXX 103
GG F G S FGG K FG + GGG + GGG G G
Sbjct: 21 GGGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTC 80
Query: 104 XXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXXX 163
STA G FG+ + + +FG
Sbjct: 81 GSGFGGGSTGGSPYGGASSGFGGSTATSG-FGSGEKSSAFG---------------GSGG 124
Query: 164 XXXXXPATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFGQQQP 205
G G G F + GG GG + F QQP
Sbjct: 125 FGGSATGFGSGGGSFGGGNSGFGEGGHGGGERNNNCFNCQQP 166
Score = 36.3 bits (80), Expect = 0.20
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 42 CGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFG 93
CG G F G+T SP+GG A+ FG ST+T G G ++ G G FG
Sbjct: 80 CGSG-FGGGSTGGSPYGG---ASSGFGGSTATS-GFGSGEKSSAFGGSGGFG 126
Score = 35.5 bits (78), Expect = 0.35
Identities = 19/54 (35%), Positives = 21/54 (38%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPG 96
GG F G T S FGG K FG + GGG + GG G G
Sbjct: 50 GGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGG 103
Score = 33.9 bits (74), Expect = 1.1
Identities = 21/66 (31%), Positives = 24/66 (36%)
Query: 28 GGDHVVNKSLGMVMCGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTS 87
GG + G GG F G T S FGG FG + GGG +
Sbjct: 25 GGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGF 84
Query: 88 GGGLFG 93
GGG G
Sbjct: 85 GGGSTG 90
Score = 31.9 bits (69), Expect = 4.3
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Query: 28 GGDHVVNKSLGMVMCGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTS 87
GG + G GG F G T S FGG FG +TGG + +S
Sbjct: 45 GGGNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGG-----STGGSPYGGASS 99
Query: 88 GGG 90
G G
Sbjct: 100 GFG 102
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 37.5 bits (83), Expect = 0.087
Identities = 39/162 (24%), Positives = 47/162 (29%), Gaps = 16/162 (9%)
Query: 44 GGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXXXXXX 103
GG F G S FGG K FG + GGG + GGG G G
Sbjct: 21 GGGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTC 80
Query: 104 XXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXXX 163
STA G FG+ + + +FG
Sbjct: 81 GSGFGGGSTGGSPYGGASSGFGGSTATSG-FGSGEKSSAFG---------------GSGG 124
Query: 164 XXXXXPATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFGQQQP 205
G G G F + GG GG + F QQP
Sbjct: 125 FGGSATGFGSGGGSFGGGNSGFGEGGHGGGERNNNCFNCQQP 166
Score = 36.3 bits (80), Expect = 0.20
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 42 CGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFG 93
CG G F G+T SP+GG A+ FG ST+T G G ++ G G FG
Sbjct: 80 CGSG-FGGGSTGGSPYGG---ASSGFGGSTATS-GFGSGEKSSAFGGSGGFG 126
Score = 35.5 bits (78), Expect = 0.35
Identities = 19/54 (35%), Positives = 21/54 (38%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPG 96
GG F G T S FGG K FG + GGG + GG G G
Sbjct: 50 GGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGG 103
Score = 33.9 bits (74), Expect = 1.1
Identities = 21/66 (31%), Positives = 24/66 (36%)
Query: 28 GGDHVVNKSLGMVMCGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTS 87
GG + G GG F G T S FGG FG + GGG +
Sbjct: 25 GGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGF 84
Query: 88 GGGLFG 93
GGG G
Sbjct: 85 GGGSTG 90
Score = 31.9 bits (69), Expect = 4.3
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Query: 28 GGDHVVNKSLGMVMCGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTS 87
GG + G GG F G T S FGG FG +TGG + +S
Sbjct: 45 GGGNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGG-----STGGSPYGGASS 99
Query: 88 GGG 90
G G
Sbjct: 100 GFG 102
>AF125459-13|AAD12833.1| 605|Caenorhabditis elegans Hypothetical
protein Y25C1A.3 protein.
Length = 605
Score = 36.7 bits (81), Expect = 0.15
Identities = 60/322 (18%), Positives = 81/322 (25%), Gaps = 18/322 (5%)
Query: 46 SFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNP--GPXXXXXX 103
S +SG+TT+S G +T + G ST++ A GG + +GG G
Sbjct: 36 STSSGSTTASTAAGGSTSTTAAGGSTASTAA--GGSTSTTAAGGSTVSTAAGGSTASTAA 93
Query: 104 XXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXXX 163
+TA GG +T A S
Sbjct: 94 GGSTASTAAGGSTATTAAGGSTATTAAGGSTASTAAGGSTATTAAGGSTASTAAGGSTAS 153
Query: 164 XXXXXPATGPGAGLFAPQGNTMSGGG----LFGGNT-SAGAFGQQQPTGTGHVKFNPVVG 218
AG T +GG GG+T S A G T G + G
Sbjct: 154 TAAGGSTASTAAG--GSTATTAAGGSTATTAAGGSTASTAAGGSTATTAAGGSTASTAAG 211
Query: 219 TEVVMKNGTSQNINIKHHCITFMKEYEGKSLEELRLEDYMAGRKGSXXXXXXXXXXXXXX 278
T G + G S
Sbjct: 212 GSTASTAAGGSTATTAAGGSTATTAAGGSTASTA-----AGGSTASTAAGGSTATTAAGG 266
Query: 279 ENKPXXXXXXXXXXXXXXXXXXXXXXXANKPPAFGTSTAGSTLFNTTTTQAPAFGASTNT 338
+ A G STA + +T T A G ST T
Sbjct: 267 STATTAAGGSTASTAAGGSTATTAAGGSTASTAAGGSTASTAAGGSTATTAA--GGSTAT 324
Query: 339 FGFGANTQNQSTGIFGAKPATG 360
G +T + + G A A G
Sbjct: 325 TAAGGSTASTAAGGSTASTAAG 346
Score = 35.5 bits (78), Expect = 0.35
Identities = 35/154 (22%), Positives = 50/154 (32%), Gaps = 9/154 (5%)
Query: 49 SGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGN-PGPXXXXXXXXXX 107
+G +T+S G AT + G ST+T A GG A+ +GG G
Sbjct: 210 AGGSTASTAAGGSTATTAAGGSTATTAA--GGSTASTAAGGSTASTAAGGSTATTAAGGS 267
Query: 108 XXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXXXXXXX 167
+T+T G G+T +T + G
Sbjct: 268 TATTAAGGSTASTAAGGSTATTAAG--GSTASTAAGG--STASTAAGGSTATTAAGGSTA 323
Query: 168 XPATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFG 201
A G A G+T S GG+T+ A G
Sbjct: 324 TTAAGGSTASTAAGGSTASTAA--GGSTATTAAG 355
Score = 34.3 bits (75), Expect = 0.81
Identities = 35/158 (22%), Positives = 49/158 (31%), Gaps = 7/158 (4%)
Query: 49 SGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXXXXXXXXXXX 108
+G +T+S G A+ + G ST+T A GG A T+ GG +
Sbjct: 201 AGGSTASTAAGGSTASTAAGGSTATTAA--GGSTAT-TAAGGSTASTAAGGSTASTAAGG 257
Query: 109 XXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXXXXXXXX 168
STA G+T T + G
Sbjct: 258 STATTAAGGSTATTAAGGSTASTAAGGSTATTAAGG--STASTAAGGSTASTAAGGSTAT 315
Query: 169 PATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFGQQQPT 206
A G A G+T S GG+T++ A G T
Sbjct: 316 TAAGGSTATTAAGGSTASTAA--GGSTASTAAGGSTAT 351
Score = 33.9 bits (74), Expect = 1.1
Identities = 38/173 (21%), Positives = 53/173 (30%), Gaps = 9/173 (5%)
Query: 36 SLGMVMCGGGSFNS--GATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFG 93
S GG + ++ G +T+S G A+ + G ST+T A GG A T+ GG
Sbjct: 69 STSTTAAGGSTVSTAAGGSTASTAAGGSTASTAAGGSTATTAA--GGSTAT-TAAGGSTA 125
Query: 94 NPGPXXXXXXXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXXXXX 153
+ STA G+T T + G
Sbjct: 126 STAAGGSTATTAAGGSTASTAAGGSTASTAAGGSTASTAAGGSTATTAAGG--STATTAA 183
Query: 154 XXXXXXXXXXXXXXXPATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFGQQQPT 206
A G A G+T S GG+T+ A G T
Sbjct: 184 GGSTASTAAGGSTATTAAGGSTASTAAGGSTASTAA--GGSTATTAAGGSTAT 234
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 36.3 bits (80), Expect = 0.20
Identities = 43/183 (23%), Positives = 57/183 (31%), Gaps = 9/183 (4%)
Query: 28 GGDHVVNKSLGMVMCGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTS 87
GG++ V G GG F SG + FG FG+ + GG F + +
Sbjct: 59 GGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNA-----GGTGFGSGNA 113
Query: 88 GGGLFGNPGPXXXXXXXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQA-TPSFGVK 146
GG FG G + AGG FG+ A FG
Sbjct: 114 GGTGFG--GGNAGGTGFGSGNAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSG 171
Query: 147 PXXXXXXXXXXXXXXXXXXXXXPATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFGQQQPT 206
+G G+GL G+ + FGG S G FG
Sbjct: 172 KAGGTGFGSGKAGGTGFGGNSNSGSGFGSGLTNGFGSGNNHESGFGGGKS-GGFGGGNSG 230
Query: 207 GTG 209
G+G
Sbjct: 231 GSG 233
Score = 31.5 bits (68), Expect = 5.7
Identities = 42/171 (24%), Positives = 53/171 (30%), Gaps = 13/171 (7%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXXXXX 102
GG F SG T GGF +G+ G + GG F N + G FGN
Sbjct: 26 GGSGFGSGNT-----GGF--GSGNAGGTGFGSSNNGGSGFGGNNNVGPRFGNGN--AGGT 76
Query: 103 XXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQA-TPSFGVKPXXXXXXXXXXXXXX 161
+ AGG FG+ A FG
Sbjct: 77 GFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGGGNAGGTGFGSGNAGGT 136
Query: 162 XXXXXXXPATGPGAGLFAPQ--GNTMSGGGLFGGNTSAG-AFGQQQPTGTG 209
TG G+G G+ +GG FG + G FG + GTG
Sbjct: 137 GLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGSGKAGGTG 187
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 35.5 bits (78), Expect = 0.35
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 549 TAAEDILKPTNPLALKAVLDG------SHSAYRINSPTSRVQPRQLPVHKKSLFDGLEES 602
+ E I++PT P+ + V DG S+S IN+ S +P +P+H D
Sbjct: 834 STGETIVEPTQPIHFRCVADGRPMPSVSYSWLPINASESGDEPVPIPIHSD---DSQPHH 890
Query: 603 DSSLEDKLCLKPSRKRLVLRARPADGQDEGRTNRSFEQPSSGPGRTQDSVDQVDR 657
+S++ +++ L+ +AR DG + R +P S P + VD +R
Sbjct: 891 YNSIQ-VYSTTATKRILLCQARNPDGTVDDRHVFIVNKPGSAPQNPEVIVDPDNR 944
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 35.5 bits (78), Expect = 0.35
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 549 TAAEDILKPTNPLALKAVLDG------SHSAYRINSPTSRVQPRQLPVHKKSLFDGLEES 602
+ E I++PT P+ + V DG S+S IN+ S +P +P+H D
Sbjct: 897 STGETIVEPTQPIHFRCVADGRPMPSVSYSWLPINASESGDEPVPIPIHSD---DSQPHH 953
Query: 603 DSSLEDKLCLKPSRKRLVLRARPADGQDEGRTNRSFEQPSSGPGRTQDSVDQVDR 657
+S++ +++ L+ +AR DG + R +P S P + VD +R
Sbjct: 954 YNSIQ-VYSTTATKRILLCQARNPDGTVDDRHVFIVNKPGSAPQNPEVIVDPDNR 1007
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 35.5 bits (78), Expect = 0.35
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 549 TAAEDILKPTNPLALKAVLDG------SHSAYRINSPTSRVQPRQLPVHKKSLFDGLEES 602
+ E I++PT P+ + V DG S+S IN+ S +P +P+H D
Sbjct: 897 STGETIVEPTQPIHFRCVADGRPMPSVSYSWLPINASESGDEPVPIPIHSD---DSQPHH 953
Query: 603 DSSLEDKLCLKPSRKRLVLRARPADGQDEGRTNRSFEQPSSGPGRTQDSVDQVDR 657
+S++ +++ L+ +AR DG + R +P S P + VD +R
Sbjct: 954 YNSIQ-VYSTTATKRILLCQARNPDGTVDDRHVFIVNKPGSAPQNPEVIVDPDNR 1007
>AL110487-17|CAH10818.1| 304|Caenorhabditis elegans Hypothetical
protein Y39E4B.3c protein.
Length = 304
Score = 35.1 bits (77), Expect = 0.47
Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPG 96
GGGS + G GGF + G G+ T Q TGGG F NN GG N G
Sbjct: 28 GGGSLSGGGGGG---GGFS-SRGQSGSRTGVQQGTGGGGFNNNQ--GGFHPNQG 75
>AL110487-16|CAH10817.1| 307|Caenorhabditis elegans Hypothetical
protein Y39E4B.3b protein.
Length = 307
Score = 35.1 bits (77), Expect = 0.47
Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPG 96
GGGS + G GGF + G G+ T Q TGGG F NN GG N G
Sbjct: 28 GGGSLSGGGGGG---GGFS-SRGQSGSRTGVQQGTGGGGFNNNQ--GGFHPNQG 75
>AL110487-15|CAB54432.1| 395|Caenorhabditis elegans Hypothetical
protein Y39E4B.3a protein.
Length = 395
Score = 35.1 bits (77), Expect = 0.47
Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPG 96
GGGS + G GGF + G G+ T Q TGGG F NN GG N G
Sbjct: 28 GGGSLSGGGGGG---GGFS-SRGQSGSRTGVQQGTGGGGFNNNQ--GGFHPNQG 75
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 35.1 bits (77), Expect = 0.47
Identities = 49/179 (27%), Positives = 62/179 (34%), Gaps = 24/179 (13%)
Query: 44 GGSFNSGATTSSP-FGGFKPATGSFGASTSTQPATG------GGLFANNTSG--GGLFGN 94
G + NSG T + FGG P+ G FGAS+S + A G GG N G FG+
Sbjct: 282 GAAENSGLPTETTGFGGKLPSAG-FGASSSNESAFGQQSKGFGGATKNGFGGDSSSSFGS 340
Query: 95 PGPXXXXXXXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXX--XX 152
TST+ GG FG+ FG KP
Sbjct: 341 GSKAGFGGTSSSGIGGQKPGATESSGFPTKETSTS-GGTFGS-----GFGGKPTSTGFGA 394
Query: 153 XXXXXXXXXXXXXXXXPATGPGAGLFAPQGNTMSGGGL---FGGNTSAGAFGQQQPTGT 208
A+ PG F +T G GL FGG+ ++ A PT T
Sbjct: 395 PSTTDSSSGQQTAGFGGASKPG---FGGDSSTGFGSGLKAGFGGHRASTAENSGLPTET 450
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 35.1 bits (77), Expect = 0.47
Identities = 49/179 (27%), Positives = 62/179 (34%), Gaps = 24/179 (13%)
Query: 44 GGSFNSGATTSSP-FGGFKPATGSFGASTSTQPATG------GGLFANNTSG--GGLFGN 94
G + NSG T + FGG P+ G FGAS+S + A G GG N G FG+
Sbjct: 282 GAAENSGLPTETTGFGGKLPSAG-FGASSSNESAFGQQSKGFGGATKNGFGGDSSSSFGS 340
Query: 95 PGPXXXXXXXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQATPSFGVKPXXX--XX 152
TST+ GG FG+ FG KP
Sbjct: 341 GSKAGFGGTSSSGIGGQKPGATESSGFPTKETSTS-GGTFGS-----GFGGKPTSTGFGA 394
Query: 153 XXXXXXXXXXXXXXXXPATGPGAGLFAPQGNTMSGGGL---FGGNTSAGAFGQQQPTGT 208
A+ PG F +T G GL FGG+ ++ A PT T
Sbjct: 395 PSTTDSSSGQQTAGFGGASKPG---FGGDSSTGFGSGLKAGFGGHRASTAENSGLPTET 450
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.62
Identities = 42/183 (22%), Positives = 57/183 (31%), Gaps = 9/183 (4%)
Query: 28 GGDHVVNKSLGMVMCGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTS 87
GG++ V G GG F SG + FG FG+ + GG F + +
Sbjct: 59 GGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNA-----GGTGFGSGNA 113
Query: 88 GGGLFGNPGPXXXXXXXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQA-TPSFGVK 146
GG FG+ + AGG FG+ A FG
Sbjct: 114 GGTGFGSGN--AGGTGFGSGNAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSG 171
Query: 147 PXXXXXXXXXXXXXXXXXXXXXPATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFGQQQPT 206
+G G+GL G+ + FGG S G FG
Sbjct: 172 KAGGTGFGSGKAGGTGFGGNSNSGSGFGSGLTNGFGSGNNHESGFGGGKS-GGFGGGNSG 230
Query: 207 GTG 209
G+G
Sbjct: 231 GSG 233
Score = 31.9 bits (69), Expect = 4.3
Identities = 42/171 (24%), Positives = 53/171 (30%), Gaps = 13/171 (7%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXXXXX 102
GG F SG T GGF +G+ G + GG F N + G FGN
Sbjct: 26 GGSGFGSGNT-----GGF--GSGNAGGTGFGSSNNGGSGFGGNNNVGPRFGNGN--AGGT 76
Query: 103 XXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQA-TPSFGVKPXXXXXXXXXXXXXX 161
+ AGG FG+ A FG
Sbjct: 77 GFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGT 136
Query: 162 XXXXXXXPATGPGAGLFAPQ--GNTMSGGGLFGGNTSAG-AFGQQQPTGTG 209
TG G+G G+ +GG FG + G FG + GTG
Sbjct: 137 GLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGSGKAGGTG 187
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.62
Identities = 42/183 (22%), Positives = 57/183 (31%), Gaps = 9/183 (4%)
Query: 28 GGDHVVNKSLGMVMCGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTS 87
GG++ V G GG F SG + FG FG+ + GG F + +
Sbjct: 59 GGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNA-----GGTGFGSGNA 113
Query: 88 GGGLFGNPGPXXXXXXXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQA-TPSFGVK 146
GG FG+ + AGG FG+ A FG
Sbjct: 114 GGTGFGSGN--AGGTGFGSGNAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSG 171
Query: 147 PXXXXXXXXXXXXXXXXXXXXXPATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFGQQQPT 206
+G G+GL G+ + FGG S G FG
Sbjct: 172 KAGGTGFGSGKAGGTGFGGNSNSGSGFGSGLTNGFGSGNNHESGFGGGKS-GGFGGGNSG 230
Query: 207 GTG 209
G+G
Sbjct: 231 GSG 233
Score = 31.9 bits (69), Expect = 4.3
Identities = 42/171 (24%), Positives = 53/171 (30%), Gaps = 13/171 (7%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXXXXX 102
GG F SG T GGF +G+ G + GG F N + G FGN
Sbjct: 26 GGSGFGSGNT-----GGF--GSGNAGGTGFGSSNNGGSGFGGNNNVGPRFGNGN--AGGT 76
Query: 103 XXXXXXXXXXXXXXXXXXXXXXNTSTAGGGLFGNTQA-TPSFGVKPXXXXXXXXXXXXXX 161
+ AGG FG+ A FG
Sbjct: 77 GFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGT 136
Query: 162 XXXXXXXPATGPGAGLFAPQ--GNTMSGGGLFGGNTSAG-AFGQQQPTGTG 209
TG G+G G+ +GG FG + G FG + GTG
Sbjct: 137 GLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGSGKAGGTG 187
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 34.3 bits (75), Expect = 0.81
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 43 GGGSFN-SGATTSSPFGGFKPATGSFGASTSTQPATGGGLFAN---NTSGGGLFGNPG 96
GGG FN +G GG + G FG + + GGG N + +GGG GN G
Sbjct: 63 GGGGFNGNGGFNGGGRGGGRGGNGGFGDNGGLRGGNGGGRGGNGGFDDNGGGRGGNGG 120
Score = 32.7 bits (71), Expect = 2.5
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFAN--NTSGGGLFGNPG 96
G G F+ GG + TG FG + + GGG N +GGG GN G
Sbjct: 104 GNGGFDDNGGGRGGNGGGRGGTGGFGDNGGGRGGNGGGRGGNGGGNNGGGRGGNGG 159
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 34.3 bits (75), Expect = 0.81
Identities = 40/199 (20%), Positives = 73/199 (36%), Gaps = 6/199 (3%)
Query: 566 VLDGSHSAYRIN-SPTSRVQPRQLPVHKKSLFDGLEESDSSLEDKLCLKPSRKRLVLRAR 624
+LD + + I+ S T +P + H+ + D EES+ E + S+KR
Sbjct: 161 LLDAYNEEHDIDLSKTVMNKPPKKSKHQDTSDDS-EESEDEEEKSPRKRSSKKRRAASVS 219
Query: 625 PADG-QDEGRTNRSFEQPSSGPGRTQDSVDQVDRSADVNRNKSTADTEENGDLHPDKHSR 683
+D D + +++ + + DS D D + R KS + +K R
Sbjct: 220 DSDSDSDSDFDKKKWKKNKAKRSKRDDSSDD-DSEMERRRKKSKKSKKSKKFKKSEKRKR 278
Query: 684 WINSPKISDLWTERDHKPDAQRTNRMYPDIEKEVSEHISERRASWLSTKPLXXXXXXXXX 743
+N D + + KP+ + I+ + E+ + S K
Sbjct: 279 AVNDSSSDD--EDEEEKPEKRSKKSKKAVIDSSSEDEEEEKSSKKRSKKSKKESDEEQQA 336
Query: 744 XXXESSVRELGGRSASPER 762
E V E+ S SP++
Sbjct: 337 SDSEEEVVEVKKNSKSPKK 355
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 33.9 bits (74), Expect = 1.1
Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 15/67 (22%)
Query: 43 GGGSF-------NSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFA-------NNTSG 88
GGGSF NSG T FG GSFG +P T GG A +N+ G
Sbjct: 559 GGGSFGGNFSNYNSGGATGG-FGSGPAYGGSFGGGAPRRPFTNGGFGAHSSLSSTSNSGG 617
Query: 89 GGLFGNP 95
GG F P
Sbjct: 618 GGGFSGP 624
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 33.9 bits (74), Expect = 1.1
Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 15/67 (22%)
Query: 43 GGGSF-------NSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFA-------NNTSG 88
GGGSF NSG T FG GSFG +P T GG A +N+ G
Sbjct: 543 GGGSFGGNFSNYNSGGATGG-FGSGPAYGGSFGGGAPRRPFTNGGFGAHSSLSSTSNSGG 601
Query: 89 GGLFGNP 95
GG F P
Sbjct: 602 GGGFSGP 608
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 33.9 bits (74), Expect = 1.1
Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 15/67 (22%)
Query: 43 GGGSF-------NSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFA-------NNTSG 88
GGGSF NSG T FG GSFG +P T GG A +N+ G
Sbjct: 540 GGGSFGGNFSNYNSGGATGG-FGSGPAYGGSFGGGAPRRPFTNGGFGAHSSLSSTSNSGG 598
Query: 89 GGLFGNP 95
GG F P
Sbjct: 599 GGGFSGP 605
>Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical
protein K07F5.13b protein.
Length = 549
Score = 33.5 bits (73), Expect = 1.4
Identities = 44/157 (28%), Positives = 53/157 (33%), Gaps = 24/157 (15%)
Query: 67 FGASTSTQPA-TGGGLFANNTSGGGLFGNPGPXXXXXXXXXXXXXXXXXXXXXXXXXXXN 125
FG+ST + A T A TS G LFG+ P N
Sbjct: 4 FGSSTPQKQAFTFPTPNAPTTSSGTLFGSTTPSKPLFGSTAQASSTPSLFGTT------N 57
Query: 126 TSTAGGGLFGNTQATPS--------FGVKPXXXXXXXXXXXXXXXXXXXXXPA-TGPGAG 176
TST GGLFG T + + FG P A TG AG
Sbjct: 58 TSTPSGGLFGKTGTSTTTTSTAGTLFGAAPTTSTATPSLFGASTTGSTPFGAASTGTAAG 117
Query: 177 --LFAPQGNTMSGGGLFGGNTSA--GAFG----QQQP 205
LF + GG FG ++ + G G QQQP
Sbjct: 118 STLFGSSTAKPATGGFFGSSSGSTLGGLGATQQQQQP 154
Score = 33.1 bits (72), Expect = 1.9
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 314 TSTAGSTLFNTTTTQAPAFGASTNTFGFGANTQNQSTGIFGAKPATG 360
TSTA +LF +TT + FGA++ G+ ST AKPATG
Sbjct: 89 TSTATPSLFGASTTGSTPFGAASTGTAAGSTLFGSST----AKPATG 131
Score = 31.9 bits (69), Expect = 4.3
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 7/51 (13%)
Query: 47 FNSGATTSSPFGGFKPATGS----FGASTSTQPATGGGLFANNTSGGGLFG 93
F + T S+PFG T + FG+ST+ +PATGG F ++SG L G
Sbjct: 97 FGASTTGSTPFGAASTGTAAGSTLFGSSTA-KPATGG--FFGSSSGSTLGG 144
Score = 31.5 bits (68), Expect = 5.7
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 309 PPAFGTSTAGSTLFNTTTTQAPAFG----ASTNTFGFG-ANTQNQSTGIFG 354
P +T+ TLF +TT P FG AS+ FG NT S G+FG
Sbjct: 17 PTPNAPTTSSGTLFGSTTPSKPLFGSTAQASSTPSLFGTTNTSTPSGGLFG 67
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore complex
protein protein7 protein.
Length = 1217
Score = 33.5 bits (73), Expect = 1.4
Identities = 34/159 (21%), Positives = 45/159 (28%), Gaps = 10/159 (6%)
Query: 62 PATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPXXXXXXXXXXXXXXXXXXXXXXXX 121
P FG ST T G LF ++ +FG P
Sbjct: 1020 PKFTGFGNPASTASTTSGSLFGGASTNPPMFGGPSSSSIPAFSTSNSSSTSGFPSSTATP 1079
Query: 122 XXXNTSTAGGGLFGNTQATPSFGVKPXXXXXXXXXXXXXXXXXXXXXPATGPGAGLF--- 178
+T+ G+FG PS +P P G F
Sbjct: 1080 FGNAGTTSTSGVFGAFGNKPS---QPGLSSSSSTNSLFGQAPADSSNPFGGTSNNGFNFG 1136
Query: 179 ---APQGNTMSGGGLFG-GNTSAGAFGQQQPTGTGHVKF 213
+ G T GGG+F GN + A G G +F
Sbjct: 1137 ASSSTTGATAGGGGVFQFGNAATSAPAPTAAPGGGAFQF 1175
Score = 33.1 bits (72), Expect = 1.9
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 51 ATTSSPFGGFKPATGSFGASTSTQPATGGG 80
A +S+PFGG +FGAS+ST AT GG
Sbjct: 1119 ADSSNPFGGTSNNGFNFGASSSTTGATAGG 1148
>Z81094-3|CAB03153.1| 995|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 995
Score = 32.7 bits (71), Expect = 2.5
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 172 GPGAGLFAPQGNT--MSGGGLFGGNTSAGAFGQQQPTGTGHVKFN 214
G G F GN GGG FGG+ G FG +P+G G + N
Sbjct: 833 GGRGGDFGGSGNFGGSGGGGSFGGSGGGGGFGGVKPSGFGGSRNN 877
Score = 31.9 bits (69), Expect = 4.3
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 43 GGGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLF 82
GGGSF G+ FGG KP +G G+ + +P + GG F
Sbjct: 850 GGGSFG-GSGGGGGFGGVKP-SGFGGSRNNAEPTSSGGGF 887
>Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical
protein K07F5.13c protein.
Length = 639
Score = 31.5 bits (68), Expect = 5.7
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 309 PPAFGTSTAGSTLFNTTTTQAPAFG----ASTNTFGFG-ANTQNQSTGIFG 354
P +T+ TLF +TT P FG AS+ FG NT S G+FG
Sbjct: 17 PTPNAPTTSSGTLFGSTTPSKPLFGSTAQASSTPSLFGTTNTSTPSGGLFG 67
>Z68014-4|CAA92026.2| 588|Caenorhabditis elegans Hypothetical protein
W04G3.4 protein.
Length = 588
Score = 31.5 bits (68), Expect = 5.7
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 1647 VLLDELLPDAVLNDDLQTVSRLLKTLEEAAERHEVADWESGGLALSHYIHVCDEI 1701
VLL LL + +DL+T + L+KTL E E H++ L H I++C+++
Sbjct: 176 VLLKALL-SSNRPEDLETANNLIKTLVE-TEEHKLVKIHERRKKLDHAINLCNQV 228
>U97194-2|AAN84846.1| 806|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform b protein.
Length = 806
Score = 31.5 bits (68), Expect = 5.7
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Query: 597 DGLEESDSSLEDKLCLKPSRKRLVLRARPADGQDEGRTNRSFEQPSSGPGRTQDSVDQVD 656
DGL SSL + + + + G +EG+ RS S+G G SV + D
Sbjct: 326 DGLPPMASSLTNNIASSMGNNNNKKKTASSSGNEEGKDGRSSSASSNGRGARGGSVLK-D 384
Query: 657 RSADVNRNKSTADTEENGDLHPDKHS 682
D + K + + DL + +
Sbjct: 385 GKGDKQKGKRKKEETNDDDLEDENQN 410
>Z46241-3|CAA86317.1| 556|Caenorhabditis elegans Hypothetical protein
C38D4.4 protein.
Length = 556
Score = 31.1 bits (67), Expect = 7.6
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 994 LTESLQKASAPAFDVMDTAEDNAESQSLFLENRAFGVKSPTSELARLENRRSHSVQLMKA 1053
+ ES++ + A VM T +D S ++N A G P ++LA + + V +MK
Sbjct: 364 VAESMKGLTVSARSVMGTPKD-LPGVSNPIKNTARGSNKPRNDLASSKASKDLVVPVMKT 422
Query: 1054 SLYPDEEMDDDVSVSTGEQLVPNSAPIFNDQRLPSPSLG 1092
+ E S + + ++ DQ+LP S G
Sbjct: 423 TCIKSLEDTSTSSSNPSTLQLSTASTSATDQKLPKMSFG 461
>U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated kinase
CePAK protein.
Length = 572
Score = 31.1 bits (67), Expect = 7.6
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 1225 ISTLLEWSTLSECAEDECPRLSLRPEPEARLAVLRDNLRHSSKHDYVVKFGVSAAYCREV 1284
+ T +E ST +E A +++L+ +P+ L + + +KH +V + S C E+
Sbjct: 309 VYTAIEISTEAEVA---IKQMNLKDQPKKELIINEILVMRENKHANIVNYLDSYLVCDEL 365
Query: 1285 WRLCDALWGADL 1296
W + + L G L
Sbjct: 366 WVVMEYLAGGSL 377
>U29612-11|AAO61438.1| 523|Caenorhabditis elegans P21-activated
kinase family protein1, isoform c protein.
Length = 523
Score = 31.1 bits (67), Expect = 7.6
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 1225 ISTLLEWSTLSECAEDECPRLSLRPEPEARLAVLRDNLRHSSKHDYVVKFGVSAAYCREV 1284
+ T +E ST +E A +++L+ +P+ L + + +KH +V + S C E+
Sbjct: 260 VYTAIEISTEAEVA---IKQMNLKDQPKKELIINEILVMRENKHANIVNYLDSYLVCDEL 316
Query: 1285 WRLCDALWGADL 1296
W + + L G L
Sbjct: 317 WVVMEYLAGGSL 328
>U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated
kinase family protein1, isoform a protein.
Length = 572
Score = 31.1 bits (67), Expect = 7.6
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 1225 ISTLLEWSTLSECAEDECPRLSLRPEPEARLAVLRDNLRHSSKHDYVVKFGVSAAYCREV 1284
+ T +E ST +E A +++L+ +P+ L + + +KH +V + S C E+
Sbjct: 309 VYTAIEISTEAEVA---IKQMNLKDQPKKELIINEILVMRENKHANIVNYLDSYLVCDEL 365
Query: 1285 WRLCDALWGADL 1296
W + + L G L
Sbjct: 366 WVVMEYLAGGSL 377
>U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated kinase
family protein1, isoform b protein.
Length = 569
Score = 31.1 bits (67), Expect = 7.6
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 1225 ISTLLEWSTLSECAEDECPRLSLRPEPEARLAVLRDNLRHSSKHDYVVKFGVSAAYCREV 1284
+ T +E ST +E A +++L+ +P+ L + + +KH +V + S C E+
Sbjct: 306 VYTAIEISTEAEVA---IKQMNLKDQPKKELIINEILVMRENKHANIVNYLDSYLVCDEL 362
Query: 1285 WRLCDALWGADL 1296
W + + L G L
Sbjct: 363 WVVMEYLAGGSL 374
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 31.1 bits (67), Expect = 7.6
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 34 NKSLG--MVMCGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPAT---GGGLFANNTSG 88
N+ +G +V C G +G T +P G + G+ + ++QP + GGG + G
Sbjct: 184 NQDVGGQLVRCSWGK--TGDTGKTPGGSYGYGYGNSSSGGNSQPYSGYGGGGAYGGGQGG 241
Query: 89 GGLFGNPG 96
GG G PG
Sbjct: 242 GG-HGGPG 248
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 31.1 bits (67), Expect = 7.6
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 34 NKSLG--MVMCGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPAT---GGGLFANNTSG 88
N+ +G +V C G +G T +P G + G+ + ++QP + GGG + G
Sbjct: 194 NQDVGGQLVRCSWGK--TGDTGKTPGGSYGYGYGNSSSGGNSQPYSGYGGGGAYGGGQGG 251
Query: 89 GGLFGNPG 96
GG G PG
Sbjct: 252 GG-HGGPG 258
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 31.1 bits (67), Expect = 7.6
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 34 NKSLG--MVMCGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPAT---GGGLFANNTSG 88
N+ +G +V C G +G T +P G + G+ + ++QP + GGG + G
Sbjct: 297 NQDVGGQLVRCSWGK--TGDTGKTPGGSYGYGYGNSSSGGNSQPYSGYGGGGAYGGGQGG 354
Query: 89 GGLFGNPG 96
GG G PG
Sbjct: 355 GG-HGGPG 361
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 31.1 bits (67), Expect = 7.6
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 34 NKSLG--MVMCGGGSFNSGATTSSPFGGFKPATGSFGASTSTQPAT---GGGLFANNTSG 88
N+ +G +V C G +G T +P G + G+ + ++QP + GGG + G
Sbjct: 265 NQDVGGQLVRCSWGK--TGDTGKTPGGSYGYGYGNSSSGGNSQPYSGYGGGGAYGGGQGG 322
Query: 89 GGLFGNPG 96
GG G PG
Sbjct: 323 GG-HGGPG 329
>D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase
protein.
Length = 569
Score = 31.1 bits (67), Expect = 7.6
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 1225 ISTLLEWSTLSECAEDECPRLSLRPEPEARLAVLRDNLRHSSKHDYVVKFGVSAAYCREV 1284
+ T +E ST +E A +++L+ +P+ L + + +KH +V + S C E+
Sbjct: 306 VYTAIEISTEAEVA---IKQMNLKDQPKKELIINEILVMRENKHANIVNYLDSYLVCDEL 362
Query: 1285 WRLCDALWGADL 1296
W + + L G L
Sbjct: 363 WVVMEYLAGGSL 374
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.132 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,131,934
Number of Sequences: 27539
Number of extensions: 1606558
Number of successful extensions: 5194
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 4524
Number of HSP's gapped (non-prelim): 484
length of query: 1803
length of database: 12,573,161
effective HSP length: 92
effective length of query: 1711
effective length of database: 10,039,573
effective search space: 17177709403
effective search space used: 17177709403
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 67 (31.1 bits)
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