Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001817-TA|BGIBMGA001817-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type
(622 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0455 + 3487354-3488090,3489172-3489255,3489942-3490554,349... 41 0.003
03_06_0146 - 31976538-31978643,31978653-31978751 36 0.096
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 35 0.22
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583... 34 0.29
07_01_0292 - 2117212-2117326,2117402-2117527,2117654-2117791,211... 34 0.39
01_05_0525 + 22928295-22928492,22929435-22929584,22929679-229298... 34 0.39
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 33 0.51
06_03_1032 + 27029698-27029785,27030640-27031275,27031739-270319... 32 1.6
05_07_0287 + 28993615-28995617,28996464-28996524,28996603-28996830 32 1.6
12_01_0119 + 905916-907277,907737-907774,908269-908492,909411-90... 31 2.7
09_06_0048 + 20477076-20478547,20478643-20478722,20478880-204788... 31 2.7
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 31 2.7
09_06_0113 + 20938357-20938730,20938820-20939057,20939140-209392... 30 4.8
08_02_0269 + 15087481-15087893,15087978-15088074,15089068-150891... 30 4.8
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300... 30 6.3
05_04_0209 - 19073147-19074041,19074117-19074163,19074258-190744... 30 6.3
03_06_0145 - 31973924-31975837 30 6.3
01_06_1610 - 38625427-38625726,38625814-38625885,38626001-386261... 30 6.3
11_01_0619 - 4961588-4962409 29 8.4
10_02_0125 - 5537541-5538758 29 8.4
09_02_0203 - 5746068-5746307,5746469-5746729,5746833-5748239,574... 29 8.4
08_02_1241 - 25511462-25511614,25511690-25512499 29 8.4
02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930,188... 29 8.4
01_07_0105 - 41104655-41104851,41105818-41107150 29 8.4
01_05_0050 + 17579872-17580103,17580206-17580262,17581178-175814... 29 8.4
>03_01_0455 +
3487354-3488090,3489172-3489255,3489942-3490554,
3491356-3491583,3492270-3492437,3492828-3494587,
3494667-3494670
Length = 1197
Score = 41.1 bits (92), Expect = 0.003
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 415 LDRDEENRLVDDKEKSDA--VIDFDCRSID--TDAGSLSLLDETTKTM--NDDAIVHNDE 468
L E NRLV D S +ID D + + T A ++ TT + +DD
Sbjct: 358 LKSSETNRLVQDGRNSSCRNIIDLDSDNDEDYTFANVDNIGANTTVVLVDSDDGDSVASF 417
Query: 469 LTDRNSDSAQFDNGVDVSVISEKDTNEVELSVNENSAMITCNGAVTDSSTGIDSAVINSK 528
+ +++SDS Q N ++ SV+ E+ + E+S+ +N + + AV G DS IN
Sbjct: 418 VDEKSSDSKQNANYIEESVLPEQHAQQQEISMLDNENISSEAQAV---KKGKDSMDINDV 474
Query: 529 VYEKSNSFDI 538
+Y KS +I
Sbjct: 475 IYNKSGHEEI 484
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 35.9 bits (79), Expect = 0.096
Identities = 55/241 (22%), Positives = 92/241 (38%), Gaps = 24/241 (9%)
Query: 382 SNEIEAHGKSDAFDAANDSEFDISSNINCIIDGLDRDEENRLVDD-KEKSDAVIDFDCRS 440
S + A + DAA + E DI+ I G + EN + D E ++ +D + +
Sbjct: 86 SELVAASSHAPVLDAAEEDEEDITEVSPAIAGG---EHENAEISDVAESNNDHVDSNIAA 142
Query: 441 ID--TDAGSLSLLDETTKTMNDDAIVHNDELTDRNSDSAQFDNGVDVSVISEKDTNEVEL 498
+ T +G L DET + + +D + + N D FD+ + S E DT +L
Sbjct: 143 AEDTTFSGEEDLDDETDGDI--ECFDEDDGICEENPDDEIFDDDEEESDPEEDDTGSSDL 200
Query: 499 SVNENSAMITCNGAVTDSSTGIDSAVINSKVYEKSNSFDIETLLNKTXXXXXXXXXXRNA 558
TDS +S S YE+ ++ D+E+ ++
Sbjct: 201 E--------------TDSDEYTESTDEESD-YEEEDTTDLESDSDEDTESTDEESDYEEE 245
Query: 559 SPFAQQIGDNQFEINEKTDCEVTGEPEHCSKSADQNDKINIEDLLDGKRMELDDTSNDDF 618
++I D E + D E+ G D + EDL D LDD ++ F
Sbjct: 246 ID-DEEIDDESVEEDINLDDELMGFASGLFGDDDTESSHDEEDLDDDDDESLDDDGSECF 304
Query: 619 N 619
+
Sbjct: 305 D 305
Score = 30.7 bits (66), Expect = 3.6
Identities = 34/168 (20%), Positives = 64/168 (38%), Gaps = 14/168 (8%)
Query: 335 NDNMVNITQDITDVFDSDTEISRWDSDNNSNGTSKVKTSNLTAKPKLSNEIEAHGKSDAF 394
+D T + +D + DT DSD ++ T + + EI+ +
Sbjct: 204 SDEYTESTDEESDYEEEDTTDLESDSDEDTESTDE--------ESDYEEEID---DEEID 252
Query: 395 DAANDSEFDISSNINCIIDGLDRDEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDET 454
D + + + ++ + GL D++ D+E D D D S+D D ++
Sbjct: 253 DESVEEDINLDDELMGFASGLFGDDDTESSHDEEDLD---DDDDESLDDDGSECFDEEDI 309
Query: 455 TKTMNDDAIVHNDELTDRNSDSAQFDNGVDVSVISEKDTNEVELSVNE 502
N D + +DE D S + + + S E+ +E E +E
Sbjct: 310 ICAENLDDEIFDDEYVDTGSSDEEESDDEEDSYSDEEIDDEEESDCDE 357
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 34.7 bits (76), Expect = 0.22
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Query: 187 DSIEAARHKQLHTSGSLPYKCHRCTAEYKLVTTYDEHFKNDCIPFDEVPDVKCEDCWRYF 246
D + +H + SG + C RC+ Y + + Y H K C C DC R F
Sbjct: 125 DLVGIKKHFRRKHSGHRQWACSRCSKAYAVHSDYKAHLKT-C----GTRGHTC-DCGRVF 178
Query: 247 ATDNLLIQHNCAGEDGRPGVYGATVDP 273
+ I+H A GRP A+ P
Sbjct: 179 SRVESFIEHQDACNAGRPRAAEASSSP 205
>12_02_0133 - 14057469-14057497,14057516-14057581,14057770-14058363,
14058450-14058570,14058926-14059320,14059410-14059534,
14059646-14059876,14060012-14060484,14060587-14060693,
14060842-14061172,14061222-14061250,14061345-14061901,
14062170-14062255,14062344-14062406,14062646-14063001,
14063101-14063356
Length = 1272
Score = 34.3 bits (75), Expect = 0.29
Identities = 40/212 (18%), Positives = 89/212 (41%), Gaps = 13/212 (6%)
Query: 367 TSKVKTSNLTAKPKLSNEIEAHGKSDAFDAAN----DSEFDISS-NINCIIDGLDRDEEN 421
T+ T+N T ++ G D D++N ++ D+++ + C + + +
Sbjct: 987 TASSSTNNSTDLATEQQKLSCSGDEDTKDSSNSIACEAIIDVNTVPVTCSVSSVYEIGKG 1046
Query: 422 RLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAI-VHN--DELTDR-NSDSA 477
V + ++D ++D D S + ++G++ L+ TT T++ + V N DE+ +
Sbjct: 1047 IRVINLNEADNLVDVDINSSEVNSGTVDLISHTTATLHKRNVEVANWADEVNGKLEQKKI 1106
Query: 478 QFDNGVDVSVISEKDTNEVELSVNENSAMITCNGAVTDSSTGIDSAVINSKVYEKS-NSF 536
+ DN + ++T++ LS + + + D S S +++ N+
Sbjct: 1107 KLDNVGSANSSLSENTSDGRLSSKVHPLVSSSFDDSVDQSLAGSSKCNGKRIFPLDLNTV 1166
Query: 537 DIETLLNKTXXXXXXXXXXRNASPFAQQIGDN 568
D ++N R+A F ++ DN
Sbjct: 1167 DAGNVVN---ISDDEEMPERDAPDFELELTDN 1195
>07_01_0292 -
2117212-2117326,2117402-2117527,2117654-2117791,
2117904-2118323,2118421-2118591,2118701-2118880,
2118988-2119140,2119226-2119384,2119841-2120152,
2120285-2120452,2120851-2121050,2122207-2122589,
2123244-2123625
Length = 968
Score = 33.9 bits (74), Expect = 0.39
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 326 RVKTEPVLKNDNMVNITQDITDVFDSDTEISRWDSDNNSNGTSKVKTSNLTAKPKLSNEI 385
R+K+ P K +N+T+ D F + T ++ S NG+S+V + LSN I
Sbjct: 883 RLKSMPRPKQ---INMTEGSADKFSTSTRLADCMSFGRINGSSRVARHLCVSVKPLSNMI 939
Query: 386 EAHGKSD 392
+++G SD
Sbjct: 940 QSNGPSD 946
>01_05_0525 +
22928295-22928492,22929435-22929584,22929679-22929813,
22929914-22929979,22931704-22931793,22932414-22932495,
22932703-22932908
Length = 308
Score = 33.9 bits (74), Expect = 0.39
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 418 DEENRLVDDKEKSDAVIDFDCRSIDT--DAGSLSLLDETTKTMNDDAIVHNDELTDRNSD 475
D E R D++E DA+ + R++D+ D L+ L+E + A V D++ +
Sbjct: 119 DREKRKRDEEEMGDAMRALENRAMDSKQDMDILAALEEMRSMKSRHAGVTVDQMLEILKR 178
Query: 476 SAQFDNGVD-VSVISEKDTNEVELSV-NENSAMITCNGAVTDSSTGID 521
SA N D V I + D ++ +L + ++S+ NG+ S D
Sbjct: 179 SAHDKNSQDYVKRIEDDDDDDEDLVIPGQSSSTSKMNGSSQSVSNATD 226
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 33.5 bits (73), Expect = 0.51
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 415 LDRDEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLD---ETTKTMNDDAIVHNDELTD 471
LD D + ++SDA D + + + G+ LD E K D+ + D+L+
Sbjct: 480 LDEDFSSEGEGSDDESDAFDSNDEKELQSARGTKQNLDGSSEANKLDTDEGMKEEDQLSG 539
Query: 472 RNSDSAQFDNGVDVS-VISEKDTNEVEL 498
D+ + D D+S SE++ +E+EL
Sbjct: 540 DEDDTEELDEDQDISDNDSEENDDELEL 567
Score = 30.7 bits (66), Expect = 3.6
Identities = 32/153 (20%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 321 SARSIRVKTEPVLKNDNMVNITQDITDVFDSDTEISRWDSDNNSNGTSKVKTSNLTAKPK 380
S+ + ++ T+ +K ++ ++ +D T+ D D +IS D+D+ N S++ +
Sbjct: 519 SSEANKLDTDEGMKEEDQLSGDEDDTEELDEDQDIS--DNDSEENDDELELDSDMDEEND 576
Query: 381 LSNEIEAHGKSDAFDAAND-SEFDISSNINCIIDGLDRDEENRLVDDKEKSDAVIDFDCR 439
+S + S+ D +++ S+ D S+ + R R + D D R
Sbjct: 577 VSESDDDEELSEKLDDSDEGSDQDDDSDQDDKSKNSSRKANKRKLSDYIGQLNAADASLR 636
Query: 440 SIDTDAGSL---SLLDETTKTMNDDAIVHNDEL 469
++ AG+ + DE K ++D+ EL
Sbjct: 637 ALKKLAGAKKAEASCDEAGKILSDEDFKRIKEL 669
>06_03_1032 +
27029698-27029785,27030640-27031275,27031739-27031993,
27032451-27032605,27032704-27032783,27032891-27033026,
27033228-27033377,27033474-27033641
Length = 555
Score = 31.9 bits (69), Expect = 1.6
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 392 DAFDAANDSEFDISSNINCIIDGLDRDEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLL 451
D ++ + +E +SS + + ++ S + D +S D+D GS
Sbjct: 49 DCSNSGSVTEAVVSSEEPSDRSSTEEPSDRSSTEEPSDSSSGGDSSSQSADSDGGSKEAP 108
Query: 452 DETTKTMNDDAIVHNDELTDRNSDSAQFDNGVDVSVISEKDTNEVELSVNEN 503
+K NDD + E TD++S A D V SV S+ +++ VE N
Sbjct: 109 KMDSKAGNDD----SSECTDQSSPRAVLDISVSGSVDSD-ESSSVEQPAESN 155
>05_07_0287 + 28993615-28995617,28996464-28996524,28996603-28996830
Length = 763
Score = 31.9 bits (69), Expect = 1.6
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 22/179 (12%)
Query: 312 LDKSCFYPYSARSIRVKTEPVLKNDNMVNITQDITDVFDSDTEISRWDSDNNSNGTSKVK 371
+DK C S++ + V ++ + NI +DI D+ +++ TS
Sbjct: 351 IDKECGSNRSSQLLSVS----VRRSRLANIPKDILCQGDAYSQVE----------TSAFN 396
Query: 372 TSNLTAKPKLSNEIEAHGKSDAFDAANDSEFDISSNINCIIDGLD---RDEENRLVDDKE 428
T NL A P + ++ S D + ++N + D +D RDE + + ++
Sbjct: 397 TGNLQA-PVIEDKCVDPFSSRLKDCSGGDRTSKECSLNIMADSVDANVRDERSDVTYEQN 455
Query: 429 KSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHN-DELTDRNSDSAQFDNGVDVS 486
D F ++ + L E+T DD + N D+LT N D++ ++G DVS
Sbjct: 456 SKDHKEGFGEETVSSRHEQK--LKESTSGFCDDGSMGNIDKLTADNDDTSSLEDG-DVS 511
>12_01_0119 +
905916-907277,907737-907774,908269-908492,909411-909637,
909733-909980,910275-910557,910707-911135
Length = 936
Score = 31.1 bits (67), Expect = 2.7
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 17/159 (10%)
Query: 307 LDDFGLDKSCFYPYSARSIRVKTEPVLKNDNMVNITQDITDVFDSDTEISRWDSDN---- 362
L D+G D + R + L ND+ +N TD+ + + +WDSD+
Sbjct: 155 LGDYGGDSDTSIEEHSVMTRRRISIQLDNDSYMNTD---TDIDPMNARLDQWDSDDQEDV 211
Query: 363 NSNGTSKVKTSNLTAKPKLSNEIEAHGKSDAFDAANDSEFDISSNINCIIDGLDRDEENR 422
+G ++ + +T + S++I+ G S+ D + D ++ S ++ R
Sbjct: 212 EESGFDEI-VNTMTQHQQQSHDIQLSGLSE--DESEDGVWNWSVSVR------QRANVTN 262
Query: 423 LVDDKEKSDAVIDFDCRSID-TDAGSLSLLDETTKTMND 460
L+DD E+ + F D DA +L E ND
Sbjct: 263 LLDDMEEPEMRTTFVGNPDDYVDARQFEMLLEQFAEDND 301
>09_06_0048 +
20477076-20478547,20478643-20478722,20478880-20478893,
20480164-20481199,20481275-20481402,20481673-20481732,
20481774-20481878,20481971-20482055,20482315-20482470,
20482562-20482831,20482877-20483671,20483844-20483903,
20484062-20485134
Length = 1777
Score = 31.1 bits (67), Expect = 2.7
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 425 DDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDE--LTDRNSDSAQFDNG 482
+ +E + + D S D G SL+D+ T+ + D+ TD+N+ D G
Sbjct: 92 EPEEDARVQVRLDDTSAAVDEGGASLIDDVMNTLPVGGVASFDDGPQTDKNAQ----DEG 147
Query: 483 VDVSVISEKDTNEVELSVNENSAMITCNGAVTDSSTGIDSAV 524
+ V+S N+ + ++ + +V++ TG+D V
Sbjct: 148 ALIDVVSSTVLNDASID------LVKASDSVSEEGTGMDILV 183
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 31.1 bits (67), Expect = 2.7
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 350 DSDTEISRWDSDNNSNGTSKVKTSNLTAKPKLSNEIEAHGKSDAFDAANDSEFDISSNIN 409
++D+ S SD S+ K KT+ KP ++ + +SD+ D+ +DSE D
Sbjct: 178 ETDSSSSDSSSDEESDEDDK-KTAAPVKKPSVAAIQKKTQESDSSDSDSDSESDEDVPTK 236
Query: 410 CIIDGLDRDEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHND 467
++E + D + SD+ + I A ++ +E++ + + D+ +D
Sbjct: 237 APAVAKKKEESSESSDSESDSDSDDEAAKTIIPAKAAAVKKEEESSDSSDSDSESESD 294
>09_06_0113 +
20938357-20938730,20938820-20939057,20939140-20939264,
20939682-20939715,20939804-20939850,20939948-20940079,
20940420-20940484,20940613-20940685,20940790-20940946
Length = 414
Score = 30.3 bits (65), Expect = 4.8
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 516 SSTGIDSAVINS-KVYEKSNSFDIETLLNKTXXXXXXXXXXRNASPFAQQIGDNQFEINE 574
S G+ A+ N+ +V KS S I L + T + +P + N+
Sbjct: 308 SIDGLKRALSNADRVTAKSQSQGIRFLSHVTGNIESNLSSNGSTNPQTSRFSSNK----R 363
Query: 575 KTDCEVTGEPEHCSKSADQNDKINIEDLLDGKRMELDDTSNDD 617
T C P+ + +Q++K K +ELDD S+DD
Sbjct: 364 STSCSTKSMPKPGLQKQEQDNKKMKMTCPPKKTIELDDVSSDD 406
>08_02_0269 +
15087481-15087893,15087978-15088074,15089068-15089112,
15089281-15089492,15090809-15090911,15091002-15091097,
15091405-15091473,15093341-15093588,15093640-15093759,
15093847-15094284,15094503-15094620,15095262-15095303,
15097099-15097161,15097365-15097475,15097730-15097801,
15097875-15097993,15099682-15099745,15100238-15101860
Length = 1350
Score = 30.3 bits (65), Expect = 4.8
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 452 DETTKTMNDDAIVHNDELTDRNSDSAQFDNGVDVSVISEKDTNEVELSVNENSAMITCNG 511
DE+ ++ +D + ++D D N DS D D + ++ DT+ + ++ +++C G
Sbjct: 201 DESLESSDDCSYSNSDSSDDNNDDSTDEDTDTDGNA-TDDDTDMICAICDDGGKLLSCEG 259
>11_06_0768 + 27129007-27129038,27129140-27129220,27129723-27130089,
27130165-27130255,27130515-27130595,27130764-27131830,
27132060-27132071,27132465-27133209,27133210-27135244,
27135712-27135787,27135925-27136029,27137080-27137166
Length = 1592
Score = 29.9 bits (64), Expect = 6.3
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 213 EYKLVTTYDEHFKNDCIPFDEVPDVKCEDCWRYFATDNLLIQHNCAGEDGRPGVYGATVD 272
E ++V Y E F+ D + D P + + W Y + L QH+ A +Y ++
Sbjct: 1240 ESEMVLLYSEQFEEDMVQEDGKPLISNPEDWEYKQLNPELNQHDHAHRGSEMVLYSEQME 1299
Query: 273 PEI 275
++
Sbjct: 1300 EDV 1302
>05_04_0209 -
19073147-19074041,19074117-19074163,19074258-19074437,
19074839-19074955,19075105-19075227,19075391-19075776,
19076177-19076303,19077140-19077202,19078035-19078086,
19078189-19080023
Length = 1274
Score = 29.9 bits (64), Expect = 6.3
Identities = 36/177 (20%), Positives = 69/177 (38%), Gaps = 17/177 (9%)
Query: 340 NITQDITDVFDSDTEISRWDSDNNSNGTSKVKTSNLTAKPKLSNEIEAHGKSDAFDAAND 399
N+ I D D+ DN+++ + TA+ + E E + + + D
Sbjct: 677 NVLPSIPDNNDAHANEGPASVDNDADSVQSYLANKYTAEQEEEEEEEEEEEEEEEEEEED 736
Query: 400 SEFDISS-NINCIIDGLDRDEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTM 458
+ D + + + D +EE+RL++ E SD ++ D S T
Sbjct: 737 EDDDEEEEDEDDEEEDEDDEEEDRLME--ENSDCLVAIDLNS-----------KPGTSAF 783
Query: 459 NDDAIVHNDELTDRNSDSAQFDNGVDVSVISEKDTNEVELSVNENSAMITCNGAVTD 515
+DD + H+D L N S+ V + ++ +E++ V S + N + D
Sbjct: 784 DDDLVTHDDGLPAMNIQSSY---PVRLELLDNAIADEIDKKVTLMSNVTAINQMLED 837
>03_06_0145 - 31973924-31975837
Length = 637
Score = 29.9 bits (64), Expect = 6.3
Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
Query: 335 NDNMVNITQ--DITDVFDSDTEISRWDSDNNSNGTSKVK-TSNLTAKPKLSNEIEAHGKS 391
++++V +T D TD+ D + D D+ + T + T+++ +++I +
Sbjct: 196 DNSVVEVTDVVDNTDMAHVDDGGATTDDDSVVDVTDVGEHTADVDGGGATTDDISVVEVT 255
Query: 392 DAFDAANDSEFD---ISSNINCIIDGLDRDEENRLVDDKEKS--DAVIDFDCRSIDTDAG 446
D D A+ + D +++ N +++ D E VDD S D + + +
Sbjct: 256 DVVDNADMAHVDDGGAATDDNSVVEVTDVAEHTADVDDGSASTDDGIAVVEVTDVVDHTA 315
Query: 447 SLSLLDETTKTMNDDAIVHNDELTDRNSDSAQFDNGVDVSVIS 489
+ + D +T T + A+V ++ D + S D G VIS
Sbjct: 316 TAHVDDGSTSTDDGIAVVDVTDVVDHTARSHVDDGGAAADVIS 358
>01_06_1610 -
38625427-38625726,38625814-38625885,38626001-38626117,
38626509-38626674,38626768-38626815,38626889-38626962,
38627126-38627243,38627332-38627420,38627512-38627687,
38627785-38627898,38627981-38628051,38628431-38628477,
38628581-38628721,38629095-38629136
Length = 524
Score = 29.9 bits (64), Expect = 6.3
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 426 DKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRNSDSAQFDNGVDV 485
++ + D ID + +D S S D DD V L DSA+ V
Sbjct: 356 EQVEMDKYIDQNAEEESSDDDSTSEQDNED---GDDVAVKIGSLKIAEQDSAE----VPD 408
Query: 486 SVISEKDTNEVELSVNENSAMITCNG 511
++ KD+NE E EN +C+G
Sbjct: 409 CTLASKDSNEPETFAKENETSTSCSG 434
>11_01_0619 - 4961588-4962409
Length = 273
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 348 VFDSDTEISRWDSDNNSNGTSKVKTSNLTAK---PKLSNEIEAHGKSDAFDAANDSEFDI 404
VFDSD+E S S+ +S +S +S+ K PK + H + + A+++S+ +
Sbjct: 190 VFDSDSESSVTGSEYSSGSSSSYSSSDSEDKKRRPKRKQQKRRHRRETSSSASSESDSES 249
Query: 405 SS 406
+S
Sbjct: 250 AS 251
>10_02_0125 - 5537541-5538758
Length = 405
Score = 29.5 bits (63), Expect = 8.4
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 337 NMVNITQDITDVFDSDTE---ISRWDSDNNSNGTSKVKTSNLTAKPKLSNEIEAHGKSDA 393
N+ +I QD+ D + T+ +S +DS+ +SNG S T++ I ++D
Sbjct: 279 NVSSIHQDVNDSINVGTQNDNLSNFDSEKDSNGDSNNGTTDANVSKDFQPPIPTPSQNDR 338
Query: 394 FDAANDSE 401
N ++
Sbjct: 339 SQTDNSAK 346
>09_02_0203 -
5746068-5746307,5746469-5746729,5746833-5748239,
5748588-5748714,5748800-5749119,5749202-5749963,
5750749-5750898,5751007-5751096,5751196-5751340,
5751440-5751617,5751753-5752448,5752555-5752753
Length = 1524
Score = 29.5 bits (63), Expect = 8.4
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Query: 428 EKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRN-------SDSAQFD 480
E SD + S DTD D K + D + +ND+ +D N SD
Sbjct: 253 ESSDNLYPLVMPSFDTDPHIWLPPDPVNKDDDTDIVANNDDNSDNNAAEGLSLSDGEADK 312
Query: 481 NGVD-VSVISEKDTNEVELSVNENSAMITCNGAVTD--SSTGID-SAVINSKVYEKS 533
N +D V+ +S + V+ N +AM C +S I+ S VIN V++KS
Sbjct: 313 NWLDIVASLSWRTALLVKPDANVGNAMDPCMYVKVKCIASGSIEQSEVINGLVFKKS 369
>08_02_1241 - 25511462-25511614,25511690-25512499
Length = 320
Score = 29.5 bits (63), Expect = 8.4
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 355 ISRWDSDNNSNGTSKVKTSNLTAKP--KLSNEIEAH-GKSDAFDAANDSEFDISSNINCI 411
+SR ++ SNG+ +T + K++ ++E DA NDS+ + N+N
Sbjct: 129 LSRKSAEIASNGSKSNETFQFAVEEMDKIAKQLELMCSNKDAEQEINDSDLNAEDNLNSH 188
Query: 412 IDGLDRDEEN 421
G + EEN
Sbjct: 189 EKGNQQSEEN 198
>02_01_0282 +
1882844-1883413,1883519-1883644,1883733-1883930,
1884442-1884666,1884844-1885224,1885282-1885989,
1886546-1886839,1887211-1887709,1887949-1888721
Length = 1257
Score = 29.5 bits (63), Expect = 8.4
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 414 GLDRDEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRN 473
G D DE++ VD ++ + +++ D DTD+ + L +E D+ D+L +
Sbjct: 867 GSDDDEDDACVDIEDDDETIVE-DAEVGDTDSTADGLDEEMDDDSADEVDEGQDDLKESV 925
Query: 474 SDSAQFDNGVDVS 486
+ ++ +G +V+
Sbjct: 926 AHESKDGDGAEVT 938
>01_07_0105 - 41104655-41104851,41105818-41107150
Length = 509
Score = 29.5 bits (63), Expect = 8.4
Identities = 28/177 (15%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 328 KTEPVLKNDNMVNITQDITDVFDSDTEISRWDSDNNSNGTSKVKTSNLTAKPKLSNEIEA 387
+ PV+ N + V+ D+T V T + ++D +S+ + + P E+ A
Sbjct: 278 RARPVVANADEVHQEDDVTSVTSPTTAPATLENDTSSSAAAAFPAA--VPAPVAGEEV-A 334
Query: 388 HGKSDAFDAANDSEFDISSNINCIIDGLDRDEENRLVDDKEKSDAV-IDFDCRSIDTDAG 446
+ + +N+ E + + G+D+ E+ + + +A+ ++ + ++ +
Sbjct: 335 QLEQPSSSKSNNGEME-------AVAGVDQAEDAK--KETSNIEAINVEQEEIKVEEEEE 385
Query: 447 SLSLLDETTKTMNDDAIVHNDELTDRNSDSAQFDNGVDVSVISEKDTNEVELSVNEN 503
+ + ET + A++ DE+T + + + ++S++ E ++V+++
Sbjct: 386 KIIVSQETEEEEEKSAVISRDEITKVEVEREEIKVEHEEIIVSQETEEEKSIAVSKD 442
>01_05_0050 +
17579872-17580103,17580206-17580262,17581178-17581413,
17581509-17581637,17581752-17581811,17582088-17582158,
17582568-17582673,17582753-17582791
Length = 309
Score = 29.5 bits (63), Expect = 8.4
Identities = 19/91 (20%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 419 EENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRNSDSAQ 478
EE+ + +E+ + V++ + ++ S + +DE + ++ I+ ++E + NS +
Sbjct: 59 EEDSGEEQEEELEPVVEQESSGYQSEYSSGNDVDEPSADSDEHIILRHEEDPEINSSVKR 118
Query: 479 FDNGVDVSVISEKDTNEVELSVNENSAMITC 509
+G S DT++ L V+ N+ ++ C
Sbjct: 119 ASSGKADSTKDASDTDDA-LEVDFNNYILKC 148
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.132 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,806,120
Number of Sequences: 37544
Number of extensions: 691775
Number of successful extensions: 1557
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1546
Number of HSP's gapped (non-prelim): 36
length of query: 622
length of database: 14,793,348
effective HSP length: 86
effective length of query: 536
effective length of database: 11,564,564
effective search space: 6198606304
effective search space used: 6198606304
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 63 (29.5 bits)
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