GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001817-TA|BGIBMGA001817-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type
         (622 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    32   0.052
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           31   0.12 
AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein pro...    29   0.28 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   3.4  
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    25   4.5  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    25   4.5  
DQ007318-1|AAY24700.1|  153|Anopheles gambiae lysozyme c-4 protein.    25   6.0  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   6.0  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    25   7.9  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 31.9 bits (69), Expect = 0.052
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 177 ACDACRVWFVDSIEAARHKQLHTSGSLP-YKCHRCTAEYKLVTTYDEHFKNDCIPFDEVP 235
           +CD C   F  S     HK +H  G+ P ++C  C       T    H +N  +   + P
Sbjct: 269 SCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQN--LHTADKP 326

Query: 236 DVKCEDC 242
            +KC+ C
Sbjct: 327 -IKCKRC 332



 Score = 24.6 bits (51), Expect = 7.9
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 178 CDACRVWFVDSIEAARHKQLHTSGSLPYKCHRC 210
           C  C   F  S E  RH +   +   P+KC  C
Sbjct: 185 CKHCDNCFTTSGELIRHIRYRHTHERPHKCTEC 217


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 30.7 bits (66), Expect = 0.12
 Identities = 17/61 (27%), Positives = 29/61 (47%)

Query: 428 EKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRNSDSAQFDNGVDVSV 487
           + S++ ID DCRS   D    +   +   + ND +   N + T+ N D A  D   +V +
Sbjct: 502 DSSESDIDDDCRSPRLDRKRKTGTKKRNPSSNDRSPNQNSDSTENNEDLAYLDTLPEVKL 561

Query: 488 I 488
           +
Sbjct: 562 V 562


>AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein
           protein.
          Length = 182

 Score = 29.5 bits (63), Expect = 0.28
 Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 6/111 (5%)

Query: 372 TSNLTAKPKLSNEIEAHGKSDAFDAANDSEFDISSNINCIIDGLDRDEENRLVDDKEKSD 431
           TS+  +  +LS++  A  +  A DA +D+E D  +      +G    E     DD E   
Sbjct: 51  TSDQESSTELSDD--AGAEEGAEDAGSDAEADAGAADG--EEGATDTESGAEGDDSEMDS 106

Query: 432 AVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRNSDSAQFDNG 482
           A+ + +  +   DA  +S  D+ T+   DDA   ++E  +   DSA    G
Sbjct: 107 AMKEGEEGAGSDDA--VSGADDETEESKDDAEEDSEEGGEEGGDSASGGEG 155


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.8 bits (54), Expect = 3.4
 Identities = 13/53 (24%), Positives = 25/53 (47%)

Query: 417 RDEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDEL 469
           +DE   L+++KEK    +    R++D    +LS+ +   K    D +    +L
Sbjct: 456 KDETKVLLEEKEKLQTELIELKRAVDESKSALSIAESELKICQHDEVTERRKL 508


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 296 MVNGH---YVVSGDLDDFGLDKSCFYPYSARSIRVKTEPVLKNDNMVNITQDITDVFDSD 352
           +V GH   ++ +G  D F  D    YP        +T  +++  +       IT  FD +
Sbjct: 258 VVGGHSHTFLYNGTADGFPDDPEDTYPIVVEHPEGRTTLIVQAASYAKYVGRITLYFDEE 317

Query: 353 TEISRWDSD 361
             I  W+ +
Sbjct: 318 GNIREWEGN 326


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 296 MVNGH---YVVSGDLDDFGLDKSCFYPYSARSIRVKTEPVLKNDNMVNITQDITDVFDSD 352
           +V GH   ++ +G  D F  D    YP        +T  +++  +       IT  FD +
Sbjct: 258 VVGGHSHTFLYNGTADGFPDDPEDTYPIVVEHPEGRTTLIVQAASYAKYVGRITLYFDEE 317

Query: 353 TEISRWDSD 361
             I  W+ +
Sbjct: 318 GNIREWEGN 326


>DQ007318-1|AAY24700.1|  153|Anopheles gambiae lysozyme c-4 protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 6.0
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)

Query: 570 FEINEKTDCEVTGEPEHCSKSADQNDKINIEDLLD 604
           F+IN KT C    +  HC K  +  D +N +DL D
Sbjct: 85  FQINSKTWCREGRKGGHCDKKCE--DFLN-DDLTD 116


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 25.0 bits (52), Expect = 6.0
 Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 334 KNDNMVNITQDITDVFDSDT--------EISRWDSDNNSNGTSKVKTSNLTAKPKLSNEI 385
           +NDN    +Q + D+   +         ++   DSD+   GT  V+ +NLT        +
Sbjct: 507 QNDNFPEFSQPVYDIDVPENVIAGTVLLQLQATDSDSGLFGTEGVRYANLTGSISSFLHL 566

Query: 386 EAHGKSDAFDAANDSEFD 403
           + H  +    A+    FD
Sbjct: 567 DPHAGTVTLMASESPVFD 584


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 24.6 bits (51), Expect = 7.9
 Identities = 16/71 (22%), Positives = 28/71 (39%)

Query: 189 IEAARHKQLHTSGSLPYKCHRCTAEYKLVTTYDEHFKNDCIPFDEVPDVKCEDCWRYFAT 248
           + A+ +KQ+           +   E  L   Y        +  D    ++ E C R+F+ 
Sbjct: 566 VHASAYKQVTGEAIYCDDIPKFANELYLAFVYSTKAHAKILSIDASEALEQEGCHRFFSA 625

Query: 249 DNLLIQHNCAG 259
           D+L  + N AG
Sbjct: 626 DDLTEEQNKAG 636


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.132    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,229
Number of Sequences: 2123
Number of extensions: 25093
Number of successful extensions: 67
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 60
Number of HSP's gapped (non-prelim): 13
length of query: 622
length of database: 516,269
effective HSP length: 68
effective length of query: 554
effective length of database: 371,905
effective search space: 206035370
effective search space used: 206035370
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 51 (24.6 bits)