Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001816-TA|BGIBMGA001816-PA|IPR001878|Zinc finger,
CCHC-type, IPR009007|Peptidase aspartic, catalytic
(238 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 51 4e-06
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 51 4e-06
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 51 4e-06
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 51 4e-06
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 51 4e-06
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 51 4e-06
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 51 4e-06
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 51 4e-06
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 51 4e-06
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 51 4e-06
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 51 4e-06
BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domai... 50 7e-06
U79569-1|AAD00321.1| 269|Homo sapiens no arches protein. 41 0.003
EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and polyadenyl... 41 0.003
CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein. 41 0.003
BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein. 40 0.010
BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and polyadenyl... 40 0.010
DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein. 36 0.16
AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid b... 35 0.22
AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein. 35 0.22
M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein. 34 0.38
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 34 0.38
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 34 0.38
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 34 0.38
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 34 0.38
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 34 0.38
AF074086-5|AAD21095.2| 666|Homo sapiens gag protein. 34 0.38
AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein. 34 0.38
BC070266-1|AAH70266.1| 393|Homo sapiens cytotoxic and regulator... 32 2.0
AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein pr... 32 2.0
AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens ... 32 2.0
AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein. 32 2.0
BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein. 31 3.5
BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for IM... 31 3.5
AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domai... 31 3.5
AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domai... 31 3.5
AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens ... 31 3.5
AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens ... 31 3.5
BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein. 31 4.7
BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein. 31 4.7
BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domai... 30 6.2
AK024418-1|BAB14916.1| 627|Homo sapiens protein ( Homo sapiens ... 30 6.2
AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein. 30 6.2
AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein. 30 6.2
U09413-1|AAC50254.1| 469|Homo sapiens zinc finger protein ZNF13... 30 8.2
BC046434-1|AAH46434.1| 658|Homo sapiens zinc finger protein 135... 30 8.2
AK094202-1|BAC04309.1| 616|Homo sapiens protein ( Homo sapiens ... 30 8.2
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCSKTW 165
CY CGK GH + +C +K + F H + V CY+CG GHVA CSKT
Sbjct: 98 CYNCGKPGHLARDCDHADEQKCYSCGEFGH---IQKDCTKVKCYRCGETGHVAINCSKTS 154
Query: 166 SV 167
V
Sbjct: 155 EV 156
Score = 43.6 bits (98), Expect = 6e-04
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCS 162
KCY+CG+ GH +C + T H K + V CY+CG GH+A C+
Sbjct: 118 KCYSCGEFGHIQKDCTKVKCYRCGETG---HVAINCSKTSEVNCYRCGESGHLARECT 172
Score = 36.3 bits (80), Expect = 0.094
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPD--TAEGKRA-PVTCYKCGVEGHVASRCS 162
CY CG+ GH + +C E++Q P + A CY CG GH+ C+
Sbjct: 74 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT 133
Query: 163 K 163
K
Sbjct: 134 K 134
Score = 33.9 bits (74), Expect = 0.50
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEH--PDTAEGKR-APVTCYKCGVEGHVASRC 161
CY CG+ GH + +C + H D E KR CY CG GH+A C
Sbjct: 54 CYRCGESGHLAKDC-DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCSKTW 165
CY CGK GH + +C +K + F H + V CY+CG GHVA CSKT
Sbjct: 98 CYNCGKPGHLARDCDHADEQKCYSCGEFGH---IQKDCTKVKCYRCGETGHVAINCSKTS 154
Query: 166 SV 167
V
Sbjct: 155 EV 156
Score = 43.6 bits (98), Expect = 6e-04
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCS 162
KCY+CG+ GH +C + T H K + V CY+CG GH+A C+
Sbjct: 118 KCYSCGEFGHIQKDCTKVKCYRCGETG---HVAINCSKTSEVNCYRCGESGHLARECT 172
Score = 36.3 bits (80), Expect = 0.094
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPD--TAEGKRA-PVTCYKCGVEGHVASRCS 162
CY CG+ GH + +C E++Q P + A CY CG GH+ C+
Sbjct: 74 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT 133
Query: 163 K 163
K
Sbjct: 134 K 134
Score = 33.9 bits (74), Expect = 0.50
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEH--PDTAEGKR-APVTCYKCGVEGHVASRC 161
CY CG+ GH + +C + H D E KR CY CG GH+A C
Sbjct: 54 CYRCGESGHLAKDC-DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCSKTW 165
CY CGK GH + +C +K + F H + V CY+CG GHVA CSKT
Sbjct: 93 CYNCGKPGHLARDCDHADEQKCYSCGEFGH---IQKDCTKVKCYRCGETGHVAINCSKTS 149
Query: 166 SV 167
V
Sbjct: 150 EV 151
Score = 43.6 bits (98), Expect = 6e-04
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCS 162
KCY+CG+ GH +C + T H K + V CY+CG GH+A C+
Sbjct: 113 KCYSCGEFGHIQKDCTKVKCYRCGETG---HVAINCSKTSEVNCYRCGESGHLARECT 167
Score = 37.5 bits (83), Expect = 0.041
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 3/94 (3%)
Query: 73 FSYRKRSYQEMTKAVASNTHDNKLPKLSSGFTKCYACGKLGHKSNECFSRSHEKQQTTPI 132
F + S ++ + H K L CY CG+ GH + +C E++Q
Sbjct: 36 FQFVSSSLPDICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYN 95
Query: 133 FEHPD--TAEGKRA-PVTCYKCGVEGHVASRCSK 163
P + A CY CG GH+ C+K
Sbjct: 96 CGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK 129
Score = 35.5 bits (78), Expect = 0.16
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 105 KCYACGKLGHKSNEC---FSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
+C+ CG+ GH + EC R + F+ ++ P CY+CG GH+A C
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSS----LPDICYRCGESGHLAKDC 60
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCSKTW 165
CY CGK GH + +C +K + F H + V CY+CG GHVA CSKT
Sbjct: 92 CYNCGKPGHLARDCDHADEQKCYSCGEFGH---IQKDCTKVKCYRCGETGHVAINCSKTS 148
Query: 166 SV 167
V
Sbjct: 149 EV 150
Score = 43.6 bits (98), Expect = 6e-04
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCS 162
KCY+CG+ GH +C + T H K + V CY+CG GH+A C+
Sbjct: 112 KCYSCGEFGHIQKDCTKVKCYRCGETG---HVAINCSKTSEVNCYRCGESGHLARECT 166
Score = 36.3 bits (80), Expect = 0.094
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPD--TAEGKRA-PVTCYKCGVEGHVASRCS 162
CY CG+ GH + +C E++Q P + A CY CG GH+ C+
Sbjct: 68 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT 127
Query: 163 K 163
K
Sbjct: 128 K 128
Score = 35.5 bits (78), Expect = 0.16
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 105 KCYACGKLGHKSNECFS---RSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
+C+ CG+ GH + EC + R + F+ ++ P CY+CG GH+A C
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSS----LPDICYRCGESGHLAKDC 60
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCSKTW 165
CY CGK GH + +C +K + F H + V CY+CG GHVA CSKT
Sbjct: 99 CYNCGKPGHLARDCDHADEQKCYSCGEFGH---IQKDCTKVKCYRCGETGHVAINCSKTS 155
Query: 166 SV 167
V
Sbjct: 156 EV 157
Score = 43.6 bits (98), Expect = 6e-04
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCS 162
KCY+CG+ GH +C + T H K + V CY+CG GH+A C+
Sbjct: 119 KCYSCGEFGHIQKDCTKVKCYRCGETG---HVAINCSKTSEVNCYRCGESGHLARECT 173
Score = 38.3 bits (85), Expect = 0.023
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEH--PDTAEGKR-APVTCYKCGVEGHVASRC 161
CY CG+ GH + +C + E H D E KR CY CG GH+A C
Sbjct: 54 CYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 112
Score = 36.3 bits (80), Expect = 0.094
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPD--TAEGKRA-PVTCYKCGVEGHVASRCS 162
CY CG+ GH + +C E++Q P + A CY CG GH+ C+
Sbjct: 75 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT 134
Query: 163 K 163
K
Sbjct: 135 K 135
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCSKTW 165
CY CGK GH + +C +K + F H + V CY+CG GHVA CSKT
Sbjct: 99 CYNCGKPGHLARDCDHADEQKCYSCGEFGH---IQKDCTKVKCYRCGETGHVAINCSKTS 155
Query: 166 SV 167
V
Sbjct: 156 EV 157
Score = 43.6 bits (98), Expect = 6e-04
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCS 162
KCY+CG+ GH +C + T H K + V CY+CG GH+A C+
Sbjct: 119 KCYSCGEFGHIQKDCTKVKCYRCGETG---HVAINCSKTSEVNCYRCGESGHLARECT 173
Score = 38.3 bits (85), Expect = 0.023
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEH--PDTAEGKR-APVTCYKCGVEGHVASRC 161
CY CG+ GH + +C + E H D E KR CY CG GH+A C
Sbjct: 54 CYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 112
Score = 36.3 bits (80), Expect = 0.094
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPD--TAEGKRA-PVTCYKCGVEGHVASRCS 162
CY CG+ GH + +C E++Q P + A CY CG GH+ C+
Sbjct: 75 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT 134
Query: 163 K 163
K
Sbjct: 135 K 135
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCSKTW 165
CY CGK GH + +C +K + F H + V CY+CG GHVA CSKT
Sbjct: 98 CYNCGKPGHLARDCDHADEQKCYSCGEFGH---IQKDCTKVKCYRCGETGHVAINCSKTS 154
Query: 166 SV 167
V
Sbjct: 155 EV 156
Score = 43.6 bits (98), Expect = 6e-04
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCS 162
KCY+CG+ GH +C + T H K + V CY+CG GH+A C+
Sbjct: 118 KCYSCGEFGHIQKDCTKVKCYRCGETG---HVAINCSKTSEVNCYRCGESGHLARECT 172
Score = 36.3 bits (80), Expect = 0.094
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPD--TAEGKRA-PVTCYKCGVEGHVASRCS 162
CY CG+ GH + +C E++Q P + A CY CG GH+ C+
Sbjct: 74 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT 133
Query: 163 K 163
K
Sbjct: 134 K 134
Score = 33.9 bits (74), Expect = 0.50
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEH--PDTAEGKR-APVTCYKCGVEGHVASRC 161
CY CG+ GH + +C + H D E KR CY CG GH+A C
Sbjct: 54 CYRCGESGHLAKDC-DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCSKTW 165
CY CGK GH + +C +K + F H + V CY+CG GHVA CSKT
Sbjct: 91 CYNCGKPGHLARDCDHADEQKCYSCGEFGH---IQKDCTKVKCYRCGETGHVAINCSKTS 147
Query: 166 SV 167
V
Sbjct: 148 EV 149
Score = 43.6 bits (98), Expect = 6e-04
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCS 162
KCY+CG+ GH +C + T H K + V CY+CG GH+A C+
Sbjct: 111 KCYSCGEFGHIQKDCTKVKCYRCGETG---HVAINCSKTSEVNCYRCGESGHLARECT 165
Score = 36.3 bits (80), Expect = 0.094
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPD--TAEGKRA-PVTCYKCGVEGHVASRCS 162
CY CG+ GH + +C E++Q P + A CY CG GH+ C+
Sbjct: 67 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT 126
Query: 163 K 163
K
Sbjct: 127 K 127
Score = 35.5 bits (78), Expect = 0.16
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 105 KCYACGKLGHKSNECFS---RSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
+C+ CG+ GH + EC + R + F+ ++ P CY+CG GH+A C
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSS----LPDICYRCGESGHLAKDC 60
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCSKTW 165
CY CGK GH + +C +K + F H + V CY+CG GHVA CSKT
Sbjct: 91 CYNCGKPGHLARDCDHADEQKCYSCGEFGH---IQKDCTKVKCYRCGETGHVAINCSKTS 147
Query: 166 SV 167
V
Sbjct: 148 EV 149
Score = 43.6 bits (98), Expect = 6e-04
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCS 162
KCY+CG+ GH +C + T H K + V CY+CG GH+A C+
Sbjct: 111 KCYSCGEFGHIQKDCTKVKCYRCGETG---HVAINCSKTSEVNCYRCGESGHLARECT 165
Score = 36.3 bits (80), Expect = 0.094
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPD--TAEGKRA-PVTCYKCGVEGHVASRCS 162
CY CG+ GH + +C E++Q P + A CY CG GH+ C+
Sbjct: 67 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT 126
Query: 163 K 163
K
Sbjct: 127 K 127
Score = 35.5 bits (78), Expect = 0.16
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 105 KCYACGKLGHKSNECFS---RSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
+C+ CG+ GH + EC + R + F+ ++ P CY+CG GH+A C
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSS----LPDICYRCGESGHLAKDC 60
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCSKTW 165
CY CGK GH + +C +K + F H + V CY+CG GHVA CSKT
Sbjct: 98 CYNCGKPGHLARDCDHADEQKCYSCGEFGH---IQKDCTKVKCYRCGETGHVAINCSKTS 154
Query: 166 SV 167
V
Sbjct: 155 EV 156
Score = 43.6 bits (98), Expect = 6e-04
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCS 162
KCY+CG+ GH +C + T H K + V CY+CG GH+A C+
Sbjct: 118 KCYSCGEFGHIQKDCTKVKCYRCGETG---HVAINCSKTSEVNCYRCGESGHLARECT 172
Score = 36.3 bits (80), Expect = 0.094
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPD--TAEGKRA-PVTCYKCGVEGHVASRCS 162
CY CG+ GH + +C E++Q P + A CY CG GH+ C+
Sbjct: 74 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT 133
Query: 163 K 163
K
Sbjct: 134 K 134
Score = 33.9 bits (74), Expect = 0.50
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEH--PDTAEGKR-APVTCYKCGVEGHVASRC 161
CY CG+ GH + +C + H D E KR CY CG GH+A C
Sbjct: 54 CYRCGESGHLAKDC-DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCSKTW 165
CY CGK GH + +C +K + F H + V CY+CG GHVA CSKT
Sbjct: 88 CYNCGKPGHLARDCDHADEQKCYSCGEFGH---IQKDCTKVKCYRCGETGHVAINCSKTS 144
Query: 166 SV 167
V
Sbjct: 145 EV 146
Score = 43.6 bits (98), Expect = 6e-04
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCS 162
KCY+CG+ GH +C + T H K + V CY+CG GH+A C+
Sbjct: 108 KCYSCGEFGHIQKDCTKVKCYRCGETG---HVAINCSKTSEVNCYRCGESGHLARECT 162
Score = 36.3 bits (80), Expect = 0.094
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPD--TAEGKRA-PVTCYKCGVEGHVASRCS 162
CY CG+ GH + +C E++Q P + A CY CG GH+ C+
Sbjct: 64 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT 123
Query: 163 K 163
K
Sbjct: 124 K 124
Score = 33.9 bits (74), Expect = 0.50
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEH--PDTAEGKR-APVTCYKCGVEGHVASRC 161
CY CG+ GH + +C + H D E KR CY CG GH+A C
Sbjct: 44 CYRCGESGHLAKDC-DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 101
>BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domain
containing 13 protein.
Length = 166
Score = 50.0 bits (114), Expect = 7e-06
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCSK 163
CY CG+LGH + +C + +K + H + A V CY+CG GHVA CSK
Sbjct: 91 CYTCGRLGHLARDCDRQKEQKCYSCGKLGH---IQKDCAQVKCYRCGEIGHVAINCSK 145
Score = 38.7 bits (86), Expect = 0.018
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQ---TTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCS 162
CY CG+ GH + +C E++Q T H ++ CY CG GH+ C+
Sbjct: 67 CYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDCDRQKEQKCYSCGKLGHIQKDCA 126
Query: 163 K 163
+
Sbjct: 127 Q 127
>U79569-1|AAD00321.1| 269|Homo sapiens no arches protein.
Length = 269
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 9/50 (18%)
Query: 123 SHEKQQTTP----IFEHPDTAEGKRAP-----VTCYKCGVEGHVASRCSK 163
S QQ TP + + +++ G R P VTCYKCG +GH A+RC+K
Sbjct: 211 SSPNQQRTPQVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTK 260
>EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 269
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 9/50 (18%)
Query: 123 SHEKQQTTP----IFEHPDTAEGKRAP-----VTCYKCGVEGHVASRCSK 163
S QQ TP + + +++ G R P VTCYKCG +GH A+RC+K
Sbjct: 211 SSPNQQRTPQVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTK 260
>CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein.
Length = 269
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 9/50 (18%)
Query: 123 SHEKQQTTP----IFEHPDTAEGKRAP-----VTCYKCGVEGHVASRCSK 163
S QQ TP + + +++ G R P VTCYKCG +GH A+RC+K
Sbjct: 211 SSPNQQRTPQVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTK 260
>BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein.
Length = 243
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 128 QTTPIFEHPDTAEGKRAP-----VTCYKCGVEGHVASRCSK 163
Q + + +++ G R P VTCYKCG +GH A+RC+K
Sbjct: 194 QVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTK 234
>BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 244
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 128 QTTPIFEHPDTAEGKRAP-----VTCYKCGVEGHVASRCSK 163
Q + + +++ G R P VTCYKCG +GH A+RC+K
Sbjct: 195 QVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTK 235
>DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein.
Length = 668
Score = 35.5 bits (78), Expect = 0.16
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
KCY CG++GH C KQ T T G+ P C +C H AS+C
Sbjct: 544 KCYNCGQIGHLKKNC--PVLNKQNIT---IQATTTTGREPPDLCPRCKKGKHWASQC 595
>AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid
binding protein protein.
Length = 54
Score = 35.1 bits (77), Expect = 0.22
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 146 VTCYKCGVEGHVASRCSKTWSV 167
V CY+CG GHVA CSKT V
Sbjct: 12 VKCYRCGETGHVAINCSKTSEV 33
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 21/58 (36%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCS 162
KCY CG+ GH + C K + V CY+CG GH+A C+
Sbjct: 13 KCYRCGETGHVAINC---------------------SKTSEVNCYRCGESGHLARECT 49
>AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein.
Length = 622
Score = 35.1 bits (77), Expect = 0.22
Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 8/90 (8%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCSKTW 165
C+ CG+ GH EC ++ + + E R P C +C H S C
Sbjct: 508 CFRCGREGHLMRECRAKFPARDR--------QGIENSRRPGLCPRCRRGNHWVSECYFKI 559
Query: 166 SVASNSAQPTVAPSIVKRVNVCGMKPVTGI 195
+ A N + P ++R V G + G+
Sbjct: 560 NSAGNPQRMPNEPGPIRRSGVYGQQQKNGM 589
>M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein.
Length = 434
Score = 34.3 bits (75), Expect = 0.38
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
KCY CG++GH C KQ T T G+ P C +C H AS+C
Sbjct: 313 KCYNCGQIGHLKKNC--PVLNKQNIT----IQATTTGREPPDLCPRCKKGKHWASQC 363
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1117
Score = 34.3 bits (75), Expect = 0.38
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
KCY CG++GH C KQ T T G+ P C +C H AS+C
Sbjct: 545 KCYNCGQIGHLKKNC--PVLNKQNIT----IQATTTGREPPDLCPRCKKGKHWASQC 595
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 34.3 bits (75), Expect = 0.38
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
KCY CG++GH C KQ T T G+ P C +C H AS+C
Sbjct: 545 KCYNCGQIGHLKKNC--PVLNKQNIT----IQATTTGREPPDLCPRCKKGKHWASQC 595
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 34.3 bits (75), Expect = 0.38
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
KCY CG++GH C KQ T T G+ P C +C H AS+C
Sbjct: 545 KCYNCGQIGHLKKNC--PVLNKQNIT----IQATTTGREPPDLCPRCKKGKHWASQC 595
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 34.3 bits (75), Expect = 0.38
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
KCY CG++GH C KQ T T G+ P C +C H AS+C
Sbjct: 545 KCYNCGQIGHLKKNC--PVLNKQNIT----IQATTTGREPPDLCPRCKKGKHWASQC 595
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1177
Score = 34.3 bits (75), Expect = 0.38
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
KCY CG++GH C KQ T T G+ P C +C H AS+C
Sbjct: 545 KCYNCGQIGHLKKNC--PVLNKQNIT----IQATTTGREPPDLCPRCKKGKHWASQC 595
>AF074086-5|AAD21095.2| 666|Homo sapiens gag protein.
Length = 666
Score = 34.3 bits (75), Expect = 0.38
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
KCY CG++GH C KQ T T G+ P C +C H AS+C
Sbjct: 545 KCYNCGQIGHLKKNC--PVLNKQNIT----IQATTTGREPPDLCPRCKKGKHWASQC 595
>AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein.
Length = 666
Score = 34.3 bits (75), Expect = 0.38
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
KCY CG++GH C KQ T T G+ P C +C H AS+C
Sbjct: 545 KCYNCGQIGHLKKNC--PVLNKQNIT----IQATTTGREPPDLCPRCKKGKHWASQC 595
>BC070266-1|AAH70266.1| 393|Homo sapiens cytotoxic and regulatory T
cell molecule protein.
Length = 393
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/58 (32%), Positives = 25/58 (43%)
Query: 74 SYRKRSYQEMTKAVASNTHDNKLPKLSSGFTKCYACGKLGHKSNECFSRSHEKQQTTP 131
SYR RS E T + N + + + TK Y+ GK K N S+ EK P
Sbjct: 332 SYRSRSNNEETSSEEKNGQSSHPMRCMNYITKLYSEGKTKRKENVQHSKLEEKHIQVP 389
>AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein
protein.
Length = 899
Score = 31.9 bits (69), Expect = 2.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 142 KRAPVTCYKCGVEGHVASRCSKT 164
K V+CY CGV GH A C ++
Sbjct: 848 KNGNVSCYNCGVSGHYAQDCKQS 870
>AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens
cDNA FLJ20281 fis, clone HEP03769. ).
Length = 298
Score = 31.9 bits (69), Expect = 2.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 142 KRAPVTCYKCGVEGHVASRCSKT 164
K V+CY CGV GH A C ++
Sbjct: 247 KNGNVSCYNCGVSGHYAQDCKQS 269
>AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein.
Length = 855
Score = 31.9 bits (69), Expect = 2.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 142 KRAPVTCYKCGVEGHVASRCSKT 164
K V+CY CGV GH A C ++
Sbjct: 804 KNGNVSCYNCGVSGHYAQDCKQS 826
>BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein.
Length = 542
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIF--EHPDTAEGKRAPVTCYKCGVEGHVASRC 161
+C C LGH ++ C + TT + P T A CY C +GH C
Sbjct: 304 QCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSALAYCYHCAQKGHYGHEC 362
>BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for
IMAGE:4046616) protein.
Length = 405
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIF--EHPDTAEGKRAPVTCYKCGVEGHVASRC 161
+C C LGH ++ C + TT + P T A CY C +GH C
Sbjct: 305 QCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSALAYCYHCAQKGHYGHEC 363
>AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIF--EHPDTAEGKRAPVTCYKCGVEGHVASRC 161
+C C LGH ++ C + TT + P T A CY C +GH C
Sbjct: 305 QCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSALAYCYHCAQKGHYGHEC 363
>AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIF--EHPDTAEGKRAPVTCYKCGVEGHVASRC 161
+C C LGH ++ C + TT + P T A CY C +GH C
Sbjct: 305 QCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSALAYCYHCAQKGHYGHEC 363
>AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens
cDNA FLJ90127 fis, clone HEMBB1000106, weakly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 391
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIF--EHPDTAEGKRAPVTCYKCGVEGHVASRC 161
+C C LGH ++ C + TT + P T A CY C +GH C
Sbjct: 153 QCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSALAYCYHCAQKGHYGHEC 211
>AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22611 fis, clone HSI04961. ).
Length = 454
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIF--EHPDTAEGKRAPVTCYKCGVEGHVASRC 161
+C C LGH ++ C + TT + P T A CY C +GH C
Sbjct: 305 QCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSALAYCYHCAQKGHYGHEC 363
>BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein.
Length = 271
Score = 30.7 bits (66), Expect = 4.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 103 FTKCYACGKLGHKSNEC 119
F KC+ CG++GH S C
Sbjct: 183 FAKCFVCGEMGHLSRSC 199
>BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein.
Length = 274
Score = 30.7 bits (66), Expect = 4.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 103 FTKCYACGKLGHKSNEC 119
F KC+ CG++GH S C
Sbjct: 183 FAKCFVCGEMGHLSRSC 199
>BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domain
containing 14 protein.
Length = 949
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 11/66 (16%)
Query: 80 YQEMTKAVASNTHDNKLPKLSSGFTKCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTA 139
YQ +SN +K SG CY CG GH++ +C +Q + F P T
Sbjct: 886 YQTQGLVGSSNGSSHK----KSGNLSCYNCGATGHRAQDC-------KQPSMDFNRPGTF 934
Query: 140 EGKRAP 145
K AP
Sbjct: 935 RLKYAP 940
>AK024418-1|BAB14916.1| 627|Homo sapiens protein ( Homo sapiens
cDNA FLJ14356 fis, clone Y79AA1002103, weakly similar to
ZINC FINGER PROTEIN ZFP-36. ).
Length = 627
Score = 30.3 bits (65), Expect = 6.2
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Query: 99 LSSGFTKCYACGKLGHKSNEC---FSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEG 155
+ F CY GHK +EC + H +Q F + + + + P T G +
Sbjct: 125 MGCSFLNCYITFDAGHKPDECQEYGEKPHTHKQCGTAFNYHHSFQTQERPHT----GKKR 180
Query: 156 HVASRCSKTWSVASN 170
+ C KT+S + N
Sbjct: 181 YDCKECGKTFSSSGN 195
>AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein.
Length = 949
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 11/66 (16%)
Query: 80 YQEMTKAVASNTHDNKLPKLSSGFTKCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTA 139
YQ +SN +K SG CY CG GH++ +C +Q + F P T
Sbjct: 886 YQTQGLVGSSNGSSHK----KSGNLSCYNCGATGHRAQDC-------KQPSMDFNRPGTF 934
Query: 140 EGKRAP 145
K AP
Sbjct: 935 RLKYAP 940
>AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein.
Length = 910
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 11/66 (16%)
Query: 80 YQEMTKAVASNTHDNKLPKLSSGFTKCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTA 139
YQ +SN +K SG CY CG GH++ +C +Q + F P T
Sbjct: 847 YQTQGLVGSSNGSSHK----KSGNLSCYNCGATGHRAQDC-------KQPSMDFNRPGTF 895
Query: 140 EGKRAP 145
K AP
Sbjct: 896 RLKYAP 901
>U09413-1|AAC50254.1| 469|Homo sapiens zinc finger protein ZNF135
protein.
Length = 469
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 113 GHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCG 152
G K EC Q TP+ +H T G++ P C +CG
Sbjct: 189 GEKPYECHECGKAFTQITPLIQHQRTHTGEK-PYECGECG 227
>BC046434-1|AAH46434.1| 658|Homo sapiens zinc finger protein 135
protein.
Length = 658
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 113 GHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCG 152
G K EC Q TP+ +H T G++ P C +CG
Sbjct: 378 GEKPYECHECGKAFTQITPLIQHQRTHTGEK-PYECGECG 416
>AK094202-1|BAC04309.1| 616|Homo sapiens protein ( Homo sapiens
cDNA FLJ36883 fis, clone BLADE2000389, highly similar to
ZINC FINGER PROTEIN 135. ).
Length = 616
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 113 GHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCG 152
G K EC Q TP+ +H T G++ P C +CG
Sbjct: 336 GEKPYECHECGKAFTQITPLIQHQRTHTGEK-PYECGECG 374
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.130 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,144,301
Number of Sequences: 224733
Number of extensions: 1320520
Number of successful extensions: 3390
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 3166
Number of HSP's gapped (non-prelim): 149
length of query: 238
length of database: 73,234,838
effective HSP length: 88
effective length of query: 150
effective length of database: 53,458,334
effective search space: 8018750100
effective search space used: 8018750100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
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