Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001816-TA|BGIBMGA001816-PA|IPR001878|Zinc finger,
CCHC-type, IPR009007|Peptidase aspartic, catalytic
(238 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 148 8e-36
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 40 0.002
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 40 0.002
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 40 0.002
U26549-1|AAA67954.1| 296|Drosophila melanogaster zinc finger pr... 37 0.028
BT029412-1|ABK57069.1| 320|Drosophila melanogaster IP02511p pro... 37 0.028
BT025009-1|ABE01239.1| 296|Drosophila melanogaster IP02509p pro... 37 0.028
AE014134-157|AAF51453.1| 296|Drosophila melanogaster CG3642-PA ... 37 0.028
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 36 0.049
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 33 0.26
U59476-1|AAB07067.1| 352|Drosophila melanogaster RNA-binding pr... 31 1.1
AY061458-1|AAL29006.1| 352|Drosophila melanogaster LD40792p pro... 31 1.1
AF233659-1|AAF42939.1| 1530|Drosophila melanogaster RECQ4 protein. 31 1.1
AE014296-1383|AAF50477.1| 1579|Drosophila melanogaster CG7487-PA... 31 1.1
AE014296-1235|AAN12056.1| 352|Drosophila melanogaster CG8597-PE... 31 1.1
AE014296-1234|AAN12055.1| 352|Drosophila melanogaster CG8597-PD... 31 1.1
AE014296-1233|AAN12054.1| 352|Drosophila melanogaster CG8597-PC... 31 1.1
AE014296-1232|AAN12053.1| 352|Drosophila melanogaster CG8597-PB... 31 1.1
AE014296-1231|AAF50578.1| 352|Drosophila melanogaster CG8597-PA... 31 1.1
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 30 3.2
AY118992-1|AAM50852.1| 151|Drosophila melanogaster LP02725p pro... 30 3.2
AE014134-567|AAN10384.1| 151|Drosophila melanogaster CG31698-PA... 30 3.2
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 29 4.3
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 29 4.3
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 29 4.3
X07656-1|CAA30502.1| 273|Drosophila melanogaster protein ( Dros... 29 5.7
AY113366-1|AAM29371.1| 655|Drosophila melanogaster LD24649p pro... 29 5.7
AY095057-1|AAM11385.1| 258|Drosophila melanogaster LD46359p pro... 29 5.7
AY058624-1|AAL13853.1| 655|Drosophila melanogaster LD31556p pro... 29 5.7
AJ249466-1|CAB60724.1| 258|Drosophila melanogaster DXl6 protein... 29 5.7
AF232774-1|AAF43414.1| 258|Drosophila melanogaster SR family sp... 29 5.7
AE014134-1188|AAF52454.1| 258|Drosophila melanogaster CG10203-P... 29 5.7
AE013599-3690|AAF47065.1| 655|Drosophila melanogaster CG5543-PA... 29 5.7
BT012673-1|AAT09323.1| 876|Drosophila melanogaster SD07102p pro... 29 7.5
AY052115-1|AAK93539.1| 1358|Drosophila melanogaster SD06557p pro... 29 7.5
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 29 7.5
AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA... 29 7.5
AE013599-3384|AAF46837.1| 775|Drosophila melanogaster CG10955-P... 29 7.5
AE013599-481|AAF59205.2| 1399|Drosophila melanogaster CG1399-PB,... 29 7.5
X53670-1|CAA37710.1| 313|Drosophila melanogaster protein ( Dros... 28 9.9
L26091-1|AAA92864.2| 313|Drosophila melanogaster transcription ... 28 9.9
BT025221-1|ABF17912.1| 1427|Drosophila melanogaster FI01019p pro... 28 9.9
AY118404-1|AAM48433.1| 1016|Drosophila melanogaster RE61305p pro... 28 9.9
AY051843-1|AAK93267.1| 313|Drosophila melanogaster LD34766p pro... 28 9.9
AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC ... 28 9.9
AE014297-4201|AAF56762.2| 1427|Drosophila melanogaster CG4976-PA... 28 9.9
AE014134-2559|AAF53436.1| 313|Drosophila melanogaster CG3710-PA... 28 9.9
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 148 bits (358), Expect = 8e-36
Identities = 83/226 (36%), Positives = 120/226 (53%), Gaps = 20/226 (8%)
Query: 1 MLTGKPQEGECLAAYASRLFTLLMSRWSNLEKEEMVVSLILAHMGQIEPRLQRNIFAEEI 60
+L +P EC A YASRL T L ++W N+E EE+ V+ +LAHM I+ RLQR +F +
Sbjct: 112 LLNSRPTAAECYAVYASRLVTQLTTKWRNMEIEEIAVTTVLAHMANIDSRLQRVLFTSNV 171
Query: 61 TTRCKMQRELMAFSYRKRSYQEMTKAVASNTHDNKLPKLSSGFTKCYACGKLGHKSNECF 120
TR K+Q EL AF++ K+ + D K K S C+ C K G + EC
Sbjct: 172 RTRSKLQAELKAFTFDKKRHARDDNL----GPDQKNRKASP--VVCHFCSKPGRRIAECR 225
Query: 121 SRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCSKTWSVASNSAQPTVAPSI 180
S+ + ++ P + +++ VTCY+CG GH +++C K + A
Sbjct: 226 SKMRQDRRAKP--------QREKSNVTCYRCGQPGHFSNQCPKNGTAAKQDVTQQ----- 272
Query: 181 VKRVNVCGMKPVTGIITQFGEQFSFCFDSGADCSLIKESVSRKLVG 226
K VN C + G + Q GE + CFDSGA+CSLIK+ +S KL G
Sbjct: 273 -KTVNQCCVTEPKGSLHQRGEIYPICFDSGAECSLIKDDISSKLSG 317
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 105 KCYACGKLGHKSNECFSRSHEK----QQTTPIFEHPDTAEGKRAP--VTCYKCGVEGHVA 158
+CY C +GH S +C + +T + A +R P V+CYKC GH++
Sbjct: 76 RCYRCNGIGHISKDCTQADNPTCYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHIS 135
Query: 159 SRCSKT 164
C +T
Sbjct: 136 KNCPET 141
Score = 35.1 bits (77), Expect = 0.086
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTT-PIFEHPDTAE-GKRAPVT---CYKCGVEGHVASR 160
CY C K GH C +E+ T ++ T K P T CY CG GH+
Sbjct: 98 CYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRRE 157
Query: 161 CSK 163
C +
Sbjct: 158 CDE 160
Score = 33.1 bits (72), Expect = 0.35
Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
KCY C + GH + C + + I P TCY+C GH C
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNP-TCYRCNKTGHWVRNC 111
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 105 KCYACGKLGHKSNECFSRSHEK----QQTTPIFEHPDTAEGKRAP--VTCYKCGVEGHVA 158
+CY C +GH S +C + +T + A +R P V+CYKC GH++
Sbjct: 76 RCYRCNGIGHISKDCTQADNPTCYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHIS 135
Query: 159 SRCSKT 164
C +T
Sbjct: 136 KNCPET 141
Score = 35.1 bits (77), Expect = 0.086
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTT-PIFEHPDTAE-GKRAPVT---CYKCGVEGHVASR 160
CY C K GH C +E+ T ++ T K P T CY CG GH+
Sbjct: 98 CYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRRE 157
Query: 161 CSK 163
C +
Sbjct: 158 CDE 160
Score = 33.1 bits (72), Expect = 0.35
Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
KCY C + GH + C + + I P TCY+C GH C
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNP-TCYRCNKTGHWVRNC 111
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 105 KCYACGKLGHKSNECFSRSHEK----QQTTPIFEHPDTAEGKRAP--VTCYKCGVEGHVA 158
+CY C +GH S +C + +T + A +R P V+CYKC GH++
Sbjct: 76 RCYRCNGIGHISKDCTQADNPTCYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHIS 135
Query: 159 SRCSKT 164
C +T
Sbjct: 136 KNCPET 141
Score = 35.1 bits (77), Expect = 0.086
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 106 CYACGKLGHKSNECFSRSHEKQQTT-PIFEHPDTAE-GKRAPVT---CYKCGVEGHVASR 160
CY C K GH C +E+ T ++ T K P T CY CG GH+
Sbjct: 98 CYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRRE 157
Query: 161 CSK 163
C +
Sbjct: 158 CDE 160
Score = 33.1 bits (72), Expect = 0.35
Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 105 KCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRC 161
KCY C + GH + C + + I P TCY+C GH C
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNP-TCYRCNKTGHWVRNC 111
>U26549-1|AAA67954.1| 296|Drosophila melanogaster zinc finger
protein protein.
Length = 296
Score = 36.7 bits (81), Expect = 0.028
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 87 VASNTHDNKLPKL--SSGFTKCYACGKLGH-KSNECFSRSHEKQQTTPIFEHPDTAEGKR 143
V S H N + + S G + Y+ G GH + + +H Q P F T +
Sbjct: 208 VGSLEHRNNINAMDHSGGHSGGYS-GHSGHIEGADDMQSNHHSQPHGPGFVKVPTPLEE- 265
Query: 144 APVTCYKCGVEGHVASRCSK 163
+TCYKCG +GH A++C K
Sbjct: 266 --ITCYKCGNKGHYANKCPK 283
Score = 29.9 bits (64), Expect = 3.2
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 106 CYACGKLGHKSNEC 119
C+ CG+LGHK+N C
Sbjct: 191 CHYCGELGHKANSC 204
>BT029412-1|ABK57069.1| 320|Drosophila melanogaster IP02511p
protein.
Length = 320
Score = 36.7 bits (81), Expect = 0.028
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 87 VASNTHDNKLPKL--SSGFTKCYACGKLGH-KSNECFSRSHEKQQTTPIFEHPDTAEGKR 143
V S H N + + S G + Y+ G GH + + +H Q P F T +
Sbjct: 232 VGSLEHRNNINAMDHSGGHSGGYS-GHSGHIEGADDMQSNHHSQPHGPGFVKVPTPLEE- 289
Query: 144 APVTCYKCGVEGHVASRCSK 163
+TCYKCG +GH A++C K
Sbjct: 290 --ITCYKCGNKGHYANKCPK 307
Score = 29.9 bits (64), Expect = 3.2
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 106 CYACGKLGHKSNEC 119
C+ CG+LGHK+N C
Sbjct: 215 CHYCGELGHKANSC 228
>BT025009-1|ABE01239.1| 296|Drosophila melanogaster IP02509p
protein.
Length = 296
Score = 36.7 bits (81), Expect = 0.028
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 87 VASNTHDNKLPKL--SSGFTKCYACGKLGH-KSNECFSRSHEKQQTTPIFEHPDTAEGKR 143
V S H N + + S G + Y+ G GH + + +H Q P F T +
Sbjct: 208 VGSLEHRNNINAMDHSGGHSGGYS-GHSGHIEGADDMQSNHHSQPHGPGFVKVPTPLEE- 265
Query: 144 APVTCYKCGVEGHVASRCSK 163
+TCYKCG +GH A++C K
Sbjct: 266 --ITCYKCGNKGHYANKCPK 283
Score = 29.9 bits (64), Expect = 3.2
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 106 CYACGKLGHKSNEC 119
C+ CG+LGHK+N C
Sbjct: 191 CHYCGELGHKANSC 204
>AE014134-157|AAF51453.1| 296|Drosophila melanogaster CG3642-PA
protein.
Length = 296
Score = 36.7 bits (81), Expect = 0.028
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 87 VASNTHDNKLPKL--SSGFTKCYACGKLGH-KSNECFSRSHEKQQTTPIFEHPDTAEGKR 143
V S H N + + S G + Y+ G GH + + +H Q P F T +
Sbjct: 208 VGSLEHRNNINAMDHSGGHSGGYS-GHSGHIEGADDMQSNHHSQPHGPGFVKVPTPLEE- 265
Query: 144 APVTCYKCGVEGHVASRCSK 163
+TCYKCG +GH A++C K
Sbjct: 266 --ITCYKCGNKGHYANKCPK 283
Score = 29.9 bits (64), Expect = 3.2
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 106 CYACGKLGHKSNEC 119
C+ CG+LGHK+N C
Sbjct: 191 CHYCGELGHKANSC 204
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 35.9 bits (79), Expect = 0.049
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 142 KRAPVTCYKCGVEGHVASRCSKTWSVASNS 171
KR P +CY CG GH+ ++C SV+SN+
Sbjct: 373 KREPGSCYACGQLGHLVAQCPTRKSVSSNN 402
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 95 KLPKLSSGFTKCYACGKLGHKSNECFSR 122
K PK G CYACG+LGH +C +R
Sbjct: 370 KKPKREPG--SCYACGQLGHLVAQCPTR 395
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 33.5 bits (73), Expect = 0.26
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 16/80 (20%)
Query: 145 PVTCYKCGVEGHVASRCSKTWSVASNSAQPTVAPSIVKRVNVCGMKPVTGIITQFGEQFS 204
P C+ C EGH++S+C P S+ V+ KPV II G +
Sbjct: 284 PTKCFSCNQEGHISSKC------------PEKVNSMRIHVDSARTKPV--IIN--GIIIN 327
Query: 205 FCFDSGADCSLIKESVSRKL 224
D+G+D ++IKE++ +K+
Sbjct: 328 CLVDTGSDVTIIKEAIFKKM 347
>U59476-1|AAB07067.1| 352|Drosophila melanogaster RNA-binding
protein lark protein.
Length = 352
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 141 GKRAPVTCYKCGVEGHVASRCSKTWSVASNSAQP 174
G P CY+CG GH + C + + A +P
Sbjct: 163 GMGDPEQCYRCGRSGHWSKECPRLYGSAGGGREP 196
Score = 28.3 bits (60), Expect = 9.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 105 KCYACGKLGHKSNEC 119
+CY CG+ GH S EC
Sbjct: 169 QCYRCGRSGHWSKEC 183
>AY061458-1|AAL29006.1| 352|Drosophila melanogaster LD40792p
protein.
Length = 352
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 141 GKRAPVTCYKCGVEGHVASRCSKTWSVASNSAQP 174
G P CY+CG GH + C + + A +P
Sbjct: 163 GMGDPEQCYRCGRSGHWSKECPRLYGSAGGGREP 196
Score = 28.3 bits (60), Expect = 9.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 105 KCYACGKLGHKSNEC 119
+CY CG+ GH S EC
Sbjct: 169 QCYRCGRSGHWSKEC 183
>AF233659-1|AAF42939.1| 1530|Drosophila melanogaster RECQ4 protein.
Length = 1530
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 75 YRKRSYQEMTKAVASNTHDNKLPKLSSGFTKCYACGKLGHKSNEC 119
Y+K+ ++ + A + D + G C+ CG +GH + +C
Sbjct: 597 YKKQQWRHKKRVAALSGPDMDMGGCDGGVLTCFQCGGVGHFAQQC 641
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 146 VTCYKCGVEGHVASRCS-KTWSVASNSAQPTVAPS 179
+TC++CG GH A +C K S+ SAQ PS
Sbjct: 626 LTCFQCGGVGHFAQQCKVKGDSLLPLSAQLEEDPS 660
>AE014296-1383|AAF50477.1| 1579|Drosophila melanogaster CG7487-PA
protein.
Length = 1579
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 75 YRKRSYQEMTKAVASNTHDNKLPKLSSGFTKCYACGKLGHKSNEC 119
Y+K+ ++ + A + D + G C+ CG +GH + +C
Sbjct: 646 YKKQQWRHKKRVAALSGPDMDMGGCDGGVLTCFQCGGVGHFAQQC 690
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 146 VTCYKCGVEGHVASRCS-KTWSVASNSAQPTVAPS 179
+TC++CG GH A +C K S+ SAQ PS
Sbjct: 675 LTCFQCGGVGHFAQQCKVKGDSLLPLSAQLEEDPS 709
>AE014296-1235|AAN12056.1| 352|Drosophila melanogaster CG8597-PE,
isoform E protein.
Length = 352
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 141 GKRAPVTCYKCGVEGHVASRCSKTWSVASNSAQP 174
G P CY+CG GH + C + + A +P
Sbjct: 163 GMGDPEQCYRCGRSGHWSKECPRLYGSAGGGREP 196
Score = 28.3 bits (60), Expect = 9.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 105 KCYACGKLGHKSNEC 119
+CY CG+ GH S EC
Sbjct: 169 QCYRCGRSGHWSKEC 183
>AE014296-1234|AAN12055.1| 352|Drosophila melanogaster CG8597-PD,
isoform D protein.
Length = 352
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 141 GKRAPVTCYKCGVEGHVASRCSKTWSVASNSAQP 174
G P CY+CG GH + C + + A +P
Sbjct: 163 GMGDPEQCYRCGRSGHWSKECPRLYGSAGGGREP 196
Score = 28.3 bits (60), Expect = 9.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 105 KCYACGKLGHKSNEC 119
+CY CG+ GH S EC
Sbjct: 169 QCYRCGRSGHWSKEC 183
>AE014296-1233|AAN12054.1| 352|Drosophila melanogaster CG8597-PC,
isoform C protein.
Length = 352
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 141 GKRAPVTCYKCGVEGHVASRCSKTWSVASNSAQP 174
G P CY+CG GH + C + + A +P
Sbjct: 163 GMGDPEQCYRCGRSGHWSKECPRLYGSAGGGREP 196
Score = 28.3 bits (60), Expect = 9.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 105 KCYACGKLGHKSNEC 119
+CY CG+ GH S EC
Sbjct: 169 QCYRCGRSGHWSKEC 183
>AE014296-1232|AAN12053.1| 352|Drosophila melanogaster CG8597-PB,
isoform B protein.
Length = 352
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 141 GKRAPVTCYKCGVEGHVASRCSKTWSVASNSAQP 174
G P CY+CG GH + C + + A +P
Sbjct: 163 GMGDPEQCYRCGRSGHWSKECPRLYGSAGGGREP 196
Score = 28.3 bits (60), Expect = 9.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 105 KCYACGKLGHKSNEC 119
+CY CG+ GH S EC
Sbjct: 169 QCYRCGRSGHWSKEC 183
>AE014296-1231|AAF50578.1| 352|Drosophila melanogaster CG8597-PA,
isoform A protein.
Length = 352
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 141 GKRAPVTCYKCGVEGHVASRCSKTWSVASNSAQP 174
G P CY+CG GH + C + + A +P
Sbjct: 163 GMGDPEQCYRCGRSGHWSKECPRLYGSAGGGREP 196
Score = 28.3 bits (60), Expect = 9.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 105 KCYACGKLGHKSNEC 119
+CY CG+ GH S EC
Sbjct: 169 QCYRCGRSGHWSKEC 183
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 83 MTKAVASNTHDNKLPKLSSGFTKCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGK 142
+ K++ T + ++S T+C+ C GH N C + + + + K
Sbjct: 772 LIKSLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYC-RNPFKCMKCGQLHASVSCTKPK 830
Query: 143 RAPVTCYKCGVEGHVAS 159
P TC C HV+S
Sbjct: 831 NLPATCANCN-GSHVSS 846
>AY118992-1|AAM50852.1| 151|Drosophila melanogaster LP02725p
protein.
Length = 151
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 187 CGMKPVTGII--TQFGEQFSFCFDSGADCSLIKESVSRKLVG 226
C KPV I + G+ +F F +DC LIKE+ +R+ G
Sbjct: 72 CDSKPVNRCILDSHCGKGVAFYFVCKSDCELIKENEARQAAG 113
>AE014134-567|AAN10384.1| 151|Drosophila melanogaster CG31698-PA
protein.
Length = 151
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 187 CGMKPVTGII--TQFGEQFSFCFDSGADCSLIKESVSRKLVG 226
C KPV I + G+ +F F +DC LIKE+ +R+ G
Sbjct: 72 CDSKPVNRCILDSHCGKGVAFYFVCKSDCELIKENEARQAAG 113
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 29.5 bits (63), Expect = 4.3
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 83 MTKAVASNTHDNKLPKLSSGFTKCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGK 142
+ K++ T + ++S T+C+ C GH N C + + + + K
Sbjct: 772 LLKSLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYC-RNPFKCMKCGQLHATVSCTKPK 830
Query: 143 RAPVTCYKCGVEGHVAS 159
P TC C HV+S
Sbjct: 831 NLPATCANCN-GSHVSS 846
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 29.5 bits (63), Expect = 4.3
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 83 MTKAVASNTHDNKLPKLSSGFTKCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGK 142
+ K++ T + ++S T+C+ C GH N C + + + + K
Sbjct: 695 LLKSLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYC-RNPFKCMKCGQLHATVSCTKPK 753
Query: 143 RAPVTCYKCGVEGHVAS 159
P TC C HV+S
Sbjct: 754 NLPATCANCN-GSHVSS 769
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 29.5 bits (63), Expect = 4.3
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 83 MTKAVASNTHDNKLPKLSSGFTKCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGK 142
+ K++ T + ++S T+C+ C GH N C + + + + K
Sbjct: 695 LLKSLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYC-RNPFKCMKCGQLHATVSCTKPK 753
Query: 143 RAPVTCYKCGVEGHVAS 159
P TC C HV+S
Sbjct: 754 NLPATCANCN-GSHVSS 769
>X07656-1|CAA30502.1| 273|Drosophila melanogaster protein (
Drosophila melanogasterretrotransposon 1731 sequence. ).
Length = 273
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 115 KSNECFSRSHEKQQTTPIFEHPDTAEGKRAPVTCYKCGVEGHVASRCSK 163
+S + F+ H+ Q P E +A+ KR V CY CG H + C +
Sbjct: 196 ESAKAFTAVHKPQ--APAREARPSAK-KRKDVVCYNCGERRHFKANCRR 241
>AY113366-1|AAM29371.1| 655|Drosophila melanogaster LD24649p
protein.
Length = 655
Score = 29.1 bits (62), Expect = 5.7
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 65 KMQRELMAFSYRKRSYQEMTKAVASNTHDNKL---PKLSSGFTKC----YACGKLGHKS- 116
K Q E + Y +SY+E+ + SN H K PKL+ F C C H+S
Sbjct: 447 KGQAEANLYFYSTKSYEEVQRIPVSNAHVVKTLWHPKLNQLFVSCGNGTIKCYYDEHRSI 506
Query: 117 ---NECFSRSHEKQQ 128
C ++H K+Q
Sbjct: 507 RGAKLCVVKTHRKRQ 521
>AY095057-1|AAM11385.1| 258|Drosophila melanogaster LD46359p
protein.
Length = 258
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 102 GFTKCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKR 143
G KCY CG GH + C R +++ + F + +R
Sbjct: 113 GDDKCYECGGRGHFARHCRERKARQRRRSNSFSRSRSTSRRR 154
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 137 DTAEGKRAPVTCYKCGVEGHVASRC 161
D G R CY+CG GH A C
Sbjct: 106 DRGGGGRGDDKCYECGGRGHFARHC 130
>AY058624-1|AAL13853.1| 655|Drosophila melanogaster LD31556p
protein.
Length = 655
Score = 29.1 bits (62), Expect = 5.7
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 65 KMQRELMAFSYRKRSYQEMTKAVASNTHDNKL---PKLSSGFTKC----YACGKLGHKS- 116
K Q E + Y +SY+E+ + SN H K PKL+ F C C H+S
Sbjct: 447 KGQAEANLYFYSTKSYEEVQRIPVSNAHVVKTLWHPKLNQLFVSCGNGTIKCYYDEHRSI 506
Query: 117 ---NECFSRSHEKQQ 128
C ++H K+Q
Sbjct: 507 RGAKLCVVKTHRKRQ 521
>AJ249466-1|CAB60724.1| 258|Drosophila melanogaster DXl6 protein
protein.
Length = 258
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 102 GFTKCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKR 143
G KCY CG GH + C R +++ + F + +R
Sbjct: 113 GDDKCYECGGRGHFARHCRERKARQRRRSNSFSRSRSTSRRR 154
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 137 DTAEGKRAPVTCYKCGVEGHVASRC 161
D G R CY+CG GH A C
Sbjct: 106 DRGGGGRGDDKCYECGGRGHFARHC 130
>AF232774-1|AAF43414.1| 258|Drosophila melanogaster SR family
splicing factor 9G8 protein.
Length = 258
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 102 GFTKCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKR 143
G KCY CG GH + C R +++ + F + +R
Sbjct: 113 GDDKCYECGGRGHFARHCRERKARQRRRSNSFSRSRSTSRRR 154
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 137 DTAEGKRAPVTCYKCGVEGHVASRC 161
D G R CY+CG GH A C
Sbjct: 106 DRGGGGRGDDKCYECGGRGHFARHC 130
>AE014134-1188|AAF52454.1| 258|Drosophila melanogaster CG10203-PA
protein.
Length = 258
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 102 GFTKCYACGKLGHKSNECFSRSHEKQQTTPIFEHPDTAEGKR 143
G KCY CG GH + C R +++ + F + +R
Sbjct: 113 GDDKCYECGGRGHFARHCRERKARQRRRSNSFSRSRSTSRRR 154
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 137 DTAEGKRAPVTCYKCGVEGHVASRC 161
D G R CY+CG GH A C
Sbjct: 106 DRGGGGRGDDKCYECGGRGHFARHC 130
>AE013599-3690|AAF47065.1| 655|Drosophila melanogaster CG5543-PA
protein.
Length = 655
Score = 29.1 bits (62), Expect = 5.7
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 65 KMQRELMAFSYRKRSYQEMTKAVASNTHDNKL---PKLSSGFTKC----YACGKLGHKS- 116
K Q E + Y +SY+E+ + SN H K PKL+ F C C H+S
Sbjct: 447 KGQAEANLYFYSTKSYEEVQRIPVSNAHVVKTLWHPKLNQLFVSCGNGTIKCYYDEHRSI 506
Query: 117 ---NECFSRSHEKQQ 128
C ++H K+Q
Sbjct: 507 RGAKLCVVKTHRKRQ 521
>BT012673-1|AAT09323.1| 876|Drosophila melanogaster SD07102p
protein.
Length = 876
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 143 RAPVTCYKCGVEGHVASRCSKTWSVASNSAQ 173
R P+ C+ CG GH RC S Q
Sbjct: 12 RKPLVCFICGTMGHAEPRCPNAICFGCGSKQ 42
>AY052115-1|AAK93539.1| 1358|Drosophila melanogaster SD06557p
protein.
Length = 1358
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 143 RAPVTCYKCGVEGHVASRCSKTWSVASNSAQ 173
R P+ C+ CG GH RC S Q
Sbjct: 494 RKPLVCFICGTMGHAEPRCPNAICFGCGSKQ 524
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 28.7 bits (61), Expect = 7.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 101 SGFTKCYACGKLGHKSNECFSRSHEKQQTTPIFEHP--DTAEGKRAPVTCYKCGVEGHVA 158
+ +C+ C ++GH + C ++H + EHP D + TCY CG + H A
Sbjct: 282 NAIVQCHRCQQIGHTAKYC-RKAHICVKCAG--EHPAKDCTRPRIELCTCYNCGGQ-HPA 337
Query: 159 S--RCSK 163
+ CSK
Sbjct: 338 NYKGCSK 344
>AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA
protein.
Length = 1734
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 143 RAPVTCYKCGVEGHVASRCSKTWSVASNSAQ 173
R P+ C+ CG GH RC S Q
Sbjct: 870 RKPLVCFICGTMGHAEPRCPNAICFGCGSKQ 900
>AE013599-3384|AAF46837.1| 775|Drosophila melanogaster CG10955-PA
protein.
Length = 775
Score = 28.7 bits (61), Expect = 7.5
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 76 RKRSYQEMTKAVASNTHDNKLPKLSSGFTKCYACGKLGHKSNECFSRSHEKQQTTPIFEH 135
RK++ ++ KA+ NK K+S FT+ ++G K + + + Q P+
Sbjct: 643 RKKNVEDAEKAILEEARANKGLKISDPFTRRITQPRMGFKGAK---KDEDDMQLAPL--- 696
Query: 136 PDTAEGKRAP 145
P GK+ P
Sbjct: 697 PPPPPGKKRP 706
>AE013599-481|AAF59205.2| 1399|Drosophila melanogaster CG1399-PB,
isoform B protein.
Length = 1399
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/53 (32%), Positives = 22/53 (41%)
Query: 46 QIEPRLQRNIFAEEITTRCKMQRELMAFSYRKRSYQEMTKAVASNTHDNKLPK 98
Q+ P+LQ + E KM R SY +SY E T T + PK
Sbjct: 700 QLMPKLQEAVRNESHPIEMKMTRVASELSYTIKSYLEETMETMMRTGIEQCPK 752
>X53670-1|CAA37710.1| 313|Drosophila melanogaster protein (
Drosophila gene forRNA polymerase II elongation factor
DmS-II. ).
Length = 313
Score = 28.3 bits (60), Expect = 9.9
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 49 PRLQRNIFAEEITTR--CKMQRELMAFSYRKRSYQEMTKAVASNTHDNKLPKLSSGFTKC 106
P L+ N +T + KM E MA K+ ++ K ++ + + KC
Sbjct: 216 PGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKC 275
Query: 107 YACGKLGHKSNECFSRSHEKQQTT 130
C K N+ +RS ++ TT
Sbjct: 276 AKCKKRNCTYNQLQTRSADEPMTT 299
>L26091-1|AAA92864.2| 313|Drosophila melanogaster transcription
elongation factor protein.
Length = 313
Score = 28.3 bits (60), Expect = 9.9
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 49 PRLQRNIFAEEITTR--CKMQRELMAFSYRKRSYQEMTKAVASNTHDNKLPKLSSGFTKC 106
P L+ N +T + KM E MA K+ ++ K ++ + + KC
Sbjct: 216 PGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKC 275
Query: 107 YACGKLGHKSNECFSRSHEKQQTT 130
C K N+ +RS ++ TT
Sbjct: 276 AKCKKRNCTYNQLQTRSADEPMTT 299
>BT025221-1|ABF17912.1| 1427|Drosophila melanogaster FI01019p protein.
Length = 1427
Score = 28.3 bits (60), Expect = 9.9
Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 6/112 (5%)
Query: 61 TTRCKMQRELMAFSYRKRSYQEMTKAVASNTHDNKLPKL-SSGFTKCYACGKLGHKSNEC 119
T+ CK + + + R + + S+ K +L SS KC C H+ ++C
Sbjct: 911 TSCCKYWPQASSSKHSARCPRHVCHTCVSDDPSGKFQQLGSSKLAKCVRCPATYHQLSKC 970
Query: 120 FSRSHEKQQTTPIF---EHPDTAEGKRAPVTCYKCGVEGHVASRCSKTWSVA 168
+ TT I + A+ + CY C G + C +T +A
Sbjct: 971 IPAGTQMLNTTNIICPRHNIAKADAHVNVLWCYICVKGGELV--CCETCPIA 1020
>AY118404-1|AAM48433.1| 1016|Drosophila melanogaster RE61305p
protein.
Length = 1016
Score = 28.3 bits (60), Expect = 9.9
Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 6/112 (5%)
Query: 61 TTRCKMQRELMAFSYRKRSYQEMTKAVASNTHDNKLPKL-SSGFTKCYACGKLGHKSNEC 119
T+ CK + + + R + + S+ K +L SS KC C H+ ++C
Sbjct: 500 TSCCKYWPQASSSKHSARCPRHVCHTCVSDDPSGKFQQLGSSKLAKCVRCPATYHQLSKC 559
Query: 120 FSRSHEKQQTTPIF---EHPDTAEGKRAPVTCYKCGVEGHVASRCSKTWSVA 168
+ TT I + A+ + CY C G + C +T +A
Sbjct: 560 IPAGTQMLNTTNIICPRHNIAKADAHVNVLWCYICVKGGELV--CCETCPIA 609
>AY051843-1|AAK93267.1| 313|Drosophila melanogaster LD34766p
protein.
Length = 313
Score = 28.3 bits (60), Expect = 9.9
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 49 PRLQRNIFAEEITTR--CKMQRELMAFSYRKRSYQEMTKAVASNTHDNKLPKLSSGFTKC 106
P L+ N +T + KM E MA K+ ++ K ++ + + KC
Sbjct: 216 PGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKC 275
Query: 107 YACGKLGHKSNECFSRSHEKQQTT 130
C K N+ +RS ++ TT
Sbjct: 276 AKCKKRNCTYNQLQTRSADEPMTT 299
>AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC
protein.
Length = 2779
Score = 28.3 bits (60), Expect = 9.9
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 14/142 (9%)
Query: 2 LTGKPQEGECLAAYASRLFTLLMSRWSNLEKEEMVVSLILAHMGQIEPRLQRNIFAEEIT 61
LT + +E E L + +L + S L+ E +V+ LA + + L+ T
Sbjct: 272 LTQRNEELEQLRVVQAEEDSLKVQENSRLQGEVLVLRERLAELENVNDLLE--------T 323
Query: 62 TRCKMQRELMAFSYRKRSYQ-EMTKAVASNTHDNKLPKLSSGFTKCYACGKLGHKSNECF 120
TRC++Q EL R+R+ + E + AS + P+ + T +L + E
Sbjct: 324 TRCELQEELTTARERQRNLELEQEQEKASRS-----PQSEAAHTDAQVSAELAKQLQELT 378
Query: 121 SRSHEKQQTTPIFEHPDTAEGK 142
++ + Q T A+ K
Sbjct: 379 NQLADLQATNEELRQQVAAQAK 400
>AE014297-4201|AAF56762.2| 1427|Drosophila melanogaster CG4976-PA
protein.
Length = 1427
Score = 28.3 bits (60), Expect = 9.9
Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 6/112 (5%)
Query: 61 TTRCKMQRELMAFSYRKRSYQEMTKAVASNTHDNKLPKL-SSGFTKCYACGKLGHKSNEC 119
T+ CK + + + R + + S+ K +L SS KC C H+ ++C
Sbjct: 911 TSCCKYWPQASSSKHSARCPRHVCHTCVSDDPSGKFQQLGSSKLAKCVRCPATYHQLSKC 970
Query: 120 FSRSHEKQQTTPIF---EHPDTAEGKRAPVTCYKCGVEGHVASRCSKTWSVA 168
+ TT I + A+ + CY C G + C +T +A
Sbjct: 971 IPAGTQMLNTTNIICPRHNIAKADAHVNVLWCYICVKGGELV--CCETCPIA 1020
>AE014134-2559|AAF53436.1| 313|Drosophila melanogaster CG3710-PA
protein.
Length = 313
Score = 28.3 bits (60), Expect = 9.9
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 49 PRLQRNIFAEEITTR--CKMQRELMAFSYRKRSYQEMTKAVASNTHDNKLPKLSSGFTKC 106
P L+ N +T + KM E MA K+ ++ K ++ + + KC
Sbjct: 216 PGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKC 275
Query: 107 YACGKLGHKSNECFSRSHEKQQTT 130
C K N+ +RS ++ TT
Sbjct: 276 AKCKKRNCTYNQLQTRSADEPMTT 299
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.319 0.130 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,558,872
Number of Sequences: 52641
Number of extensions: 453499
Number of successful extensions: 1304
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1197
Number of HSP's gapped (non-prelim): 100
length of query: 238
length of database: 24,830,863
effective HSP length: 83
effective length of query: 155
effective length of database: 20,461,660
effective search space: 3171557300
effective search space used: 3171557300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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