Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001815-TA|BGIBMGA001815-PA|undefined
         (208 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF159624-1|AAF76522.1|  574|Drosophila melanogaster cytochrome P...    31   1.5  
X98116-2|CAA66798.1|  447|Drosophila melanogaster tryptophan hyd...    30   2.0  
X98116-1|CAA66797.1|  452|Drosophila melanogaster tryptophan hyd...    30   2.0  
AY122157-1|AAM52669.1|  780|Drosophila melanogaster LD10695p pro...    30   2.0  
AY069306-1|AAL39451.1|  452|Drosophila melanogaster HL08079p pro...    30   2.0  
AE014296-1317|AAX52756.1|  447|Drosophila melanogaster CG7399-PB...    30   2.0  
AE014296-1316|AAF50517.1|  452|Drosophila melanogaster CG7399-PA...    30   2.0  
AE014135-124|AAF59321.1|  767|Drosophila melanogaster CG1783-PA ...    30   2.0  

>AF159624-1|AAF76522.1|  574|Drosophila melanogaster cytochrome
           P450-4g15 protein.
          Length = 574

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 9/135 (6%)

Query: 11  SFKGPDSADRETVEKQQ---RDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNVIV 67
           S  G D  DRE  +++    RD  Y      K + NV D  N I    R       ++++
Sbjct: 301 STAGSDEKDREKDKEKASPWRDLSYGQSAGLKDDLNVED--NDIGKKKRLA---FLDLML 355

Query: 68  RRSAHGRLKRDLDSASNLTAVKTDANVTKSSGRKS-MNAPGAPNILKEKLLSYLDDAFGD 126
             + +G L  D +    +  +  + + T ++G    ++  G    +++++L+ LD  FGD
Sbjct: 356 ESAQNGALITDTEIKEQVDTIMFEGHDTTAAGSSFFLSLMGIHQDIQDRVLAELDSIFGD 415

Query: 127 IKNKMAVLNVVKMSY 141
            +      + ++M Y
Sbjct: 416 SQRPATFQDTLEMKY 430


>X98116-2|CAA66798.1|  447|Drosophila melanogaster tryptophan
           hydroxylase protein.
          Length = 447

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 83  SNLTAV--KTDANVTKSSGRKSMNAPGAPNILKEKLLS-YLDDAFGDIKNKMAVLNVVKM 139
           +N+ A+  K D N+     R S+  PG    ++    S  L  A  D+K + +  N++  
Sbjct: 44  ANILAIFKKHDINLVHIESRSSLRVPGYEFFVEADGKSGALGKAIEDVKEQCSYFNIISR 103

Query: 140 SYKNN 144
            YK+N
Sbjct: 104 DYKDN 108


>X98116-1|CAA66797.1|  452|Drosophila melanogaster tryptophan
           hydroxylase protein.
          Length = 452

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 83  SNLTAV--KTDANVTKSSGRKSMNAPGAPNILKEKLLS-YLDDAFGDIKNKMAVLNVVKM 139
           +N+ A+  K D N+     R S+  PG    ++    S  L  A  D+K + +  N++  
Sbjct: 49  ANILAIFKKHDINLVHIESRSSLRVPGYEFFVEADGKSGALGKAIEDVKEQCSYFNIISR 108

Query: 140 SYKNN 144
            YK+N
Sbjct: 109 DYKDN 113


>AY122157-1|AAM52669.1|  780|Drosophila melanogaster LD10695p
          protein.
          Length = 780

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)

Query: 29 DFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNVI-VRRSAHGRLKRDLDSASNLTA 87
          +++YVV+   K+N   +   +R  ++ +F+  K + V+ +RR  H  L  +L   SN   
Sbjct: 20 EYEYVVL---KINGYDISHLSRYEAVQKFLQSKETLVVEIRRQKHNALDLELKHGSNAKI 76

Query: 88 VKTD 91
           K D
Sbjct: 77 SKVD 80


>AY069306-1|AAL39451.1|  452|Drosophila melanogaster HL08079p
           protein.
          Length = 452

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 83  SNLTAV--KTDANVTKSSGRKSMNAPGAPNILKEKLLS-YLDDAFGDIKNKMAVLNVVKM 139
           +N+ A+  K D N+     R S+  PG    ++    S  L  A  D+K + +  N++  
Sbjct: 49  ANILAIFKKHDINLVHIESRSSLRVPGYEFFVEADGKSGALGKAIEDVKEQCSYFNIISR 108

Query: 140 SYKNN 144
            YK+N
Sbjct: 109 DYKDN 113


>AE014296-1317|AAX52756.1|  447|Drosophila melanogaster CG7399-PB,
           isoform B protein.
          Length = 447

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 83  SNLTAV--KTDANVTKSSGRKSMNAPGAPNILKEKLLS-YLDDAFGDIKNKMAVLNVVKM 139
           +N+ A+  K D N+     R S+  PG    ++    S  L  A  D+K + +  N++  
Sbjct: 44  ANILAIFKKHDINLVHIESRSSLRVPGYEFFVEADGKSGALGKAIEDVKEQCSYFNIISR 103

Query: 140 SYKNN 144
            YK+N
Sbjct: 104 DYKDN 108


>AE014296-1316|AAF50517.1|  452|Drosophila melanogaster CG7399-PA,
           isoform A protein.
          Length = 452

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 83  SNLTAV--KTDANVTKSSGRKSMNAPGAPNILKEKLLS-YLDDAFGDIKNKMAVLNVVKM 139
           +N+ A+  K D N+     R S+  PG    ++    S  L  A  D+K + +  N++  
Sbjct: 49  ANILAIFKKHDINLVHIESRSSLRVPGYEFFVEADGKSGALGKAIEDVKEQCSYFNIISR 108

Query: 140 SYKNN 144
            YK+N
Sbjct: 109 DYKDN 113


>AE014135-124|AAF59321.1|  767|Drosophila melanogaster CG1783-PA
          protein.
          Length = 767

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)

Query: 29 DFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNVI-VRRSAHGRLKRDLDSASNLTA 87
          +++YVV+   K+N   +   +R  ++ +F+  K + V+ +RR  H  L  +L   SN   
Sbjct: 7  EYEYVVL---KINGYDISHLSRYEAVQKFLQSKETLVVEIRRQKHNALDLELKHGSNAKI 63

Query: 88 VKTD 91
           K D
Sbjct: 64 SKVD 67


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.315    0.131    0.355 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,134,743
Number of Sequences: 52641
Number of extensions: 361755
Number of successful extensions: 1376
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1376
Number of HSP's gapped (non-prelim): 8
length of query: 208
length of database: 24,830,863
effective HSP length: 82
effective length of query: 126
effective length of database: 20,514,301
effective search space: 2584801926
effective search space used: 2584801926
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)