Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001815-TA|BGIBMGA001815-PA|undefined
(208 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 31 0.91
SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_38786| Best HMM Match : HLH (HMM E-Value=1e-13) 30 1.2
SB_39788| Best HMM Match : Ricin_B_lectin (HMM E-Value=6.4e-14) 29 2.1
SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_18589| Best HMM Match : Filament (HMM E-Value=0.024) 29 2.1
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_44622| Best HMM Match : dsrm (HMM E-Value=3.1e-16) 29 2.8
SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) 29 2.8
SB_39249| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30) 29 3.7
SB_50276| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_10216| Best HMM Match : RVT_1 (HMM E-Value=0.00039) 28 4.9
SB_433| Best HMM Match : DUF883 (HMM E-Value=0.75) 28 4.9
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_50413| Best HMM Match : GRP (HMM E-Value=0.15) 28 6.4
SB_29136| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_5796| Best HMM Match : RIO1 (HMM E-Value=0) 28 6.4
SB_44831| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 30.7 bits (66), Expect = 0.91
Identities = 14/84 (16%), Positives = 42/84 (50%)
Query: 1 MQGQRKKNKLSFKGPDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDE 60
++G+ +K K +G ++T+E+ Q + ++K +AN+++++ ++ N ++
Sbjct: 1035 VRGEVEKVKRKLEGDLKMTQQTLEETQAEKARTEDEVRKRDANIVELSGKLEDSNNLVES 1094
Query: 61 KLSNVIVRRSAHGRLKRDLDSASN 84
+ + L+ +L++ N
Sbjct: 1095 LRKRIRELEARVEELEEELEAERN 1118
>SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 15 PDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNVIVRRSAHGR 74
PD ++++ E+ +Q +V +K+L + R+T ID K+S VR R
Sbjct: 280 PDDSEKDVPEESSLAYQQLVSEVKQLTRERDMLAARVTKEGHLIDSKVS--AVRAEYEER 337
Query: 75 LKRDLDSASNLTAVKTD 91
L D+ ASN++ V+++
Sbjct: 338 L--DM-LASNMSQVESE 351
>SB_38786| Best HMM Match : HLH (HMM E-Value=1e-13)
Length = 817
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 126 DIKNKMAVLNVVKMSYKNNGYFKIGYITASLDTLKVYLDNMKQDMNANKEFWDDKRVLNL 185
DI++ +A +N++ ++ K + AS+D Y+ N+K+D++ K ++KR L +
Sbjct: 382 DIRSHLASMNIISFVSSDSRQNKGTILKASVD----YIRNLKKDVDKMKLIEEEKRQLEM 437
Query: 186 FDK 188
++
Sbjct: 438 LNR 440
>SB_39788| Best HMM Match : Ricin_B_lectin (HMM E-Value=6.4e-14)
Length = 784
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 20 RETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDL 79
+ETV+K D +K N ++ +NN+I+SL++ + EK S++ + S L+
Sbjct: 544 KETVDKAINDLS------EKFNESLQRMNNKISSLHQVLHEKRSSMADKIS---ELRFTS 594
Query: 80 DSASNLTAVKTDANVTKSSG 99
D + + T+ T++ S G
Sbjct: 595 DKSESNTSTPTNSLTFNSKG 614
>SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6500
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 46 DINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDLDSASNLTAVKTDANVT 95
D N I + + L+N I+++ GR +LD A ++A TDA+ T
Sbjct: 344 DNTNLIKAAKSELPNSLANQIMQKIVQGRKVPELDLAVAVSATATDADTT 393
>SB_18589| Best HMM Match : Filament (HMM E-Value=0.024)
Length = 324
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 4 QRKKNKLSFKGPDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLS 63
Q K ++ +A ++ K++ D + K NVL + ++TSL + +L
Sbjct: 94 QEAKGQIEEMTQKNARIKSSLKEKSDALVALEAAKSAENNVL--SEQVTSLQDSLQHRLV 151
Query: 64 NVIVRRSAHGRLKRDLDSASNLTAVKTDANVTKSS 98
+ + H R K DL + +L A +T+ V ++
Sbjct: 152 ELSALQQQHARAKEDLSAIRDLQA-QTETKVQSAT 185
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 29.5 bits (63), Expect = 2.1
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
Query: 37 IKKLNANVLDINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDLDSASNLTAVKTDANVTK 96
I KL + + N R L + +DE + + R RDLD L D
Sbjct: 798 ISKLESQLNVANQRKFELEKALDEANKELKPLSDKYDRASRDLDI---LQKTLDDTQSRL 854
Query: 97 SSGRKSMNAPGAPNILKEKLLSYLDDAFGDIKNKMAVLNVVK 138
++ +++A + K++L LDDA D+ K LN K
Sbjct: 855 ANAEMTLDAETSK---KKQLQEDLDDAMEDLHEKDTELNKTK 893
>SB_44622| Best HMM Match : dsrm (HMM E-Value=3.1e-16)
Length = 724
Score = 29.1 bits (62), Expect = 2.8
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 95 TKSSGRKSMNA--PGAPNILKEKLLSYLDDAFGDIKNKMAVLNVVKMSYKNNGYFKIGYI 152
TKS R+ + A +P + K+ S +D++ ++K K + +K N + K G
Sbjct: 155 TKSPEREELCALEEASPCPDRTKVSSAVDNSSYEMKIKDTCALNKQSQFKYNVFSKSGIE 214
Query: 153 TASLDTLKVYLDNMKQDMNANKEFWDDKRVLNLFDKLKAADNAVNGLLETL 203
DTL YL N+ + N E ++ + ++ ++ V +LE+L
Sbjct: 215 LIDGDTLHSYLSNIFEFQNVTHE--QEQNLCCSSSQMNISETEVPAILESL 263
>SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42)
Length = 1078
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 4 QRKKNKLSFKGPDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLS 63
+R++ KL+ KGP ++ + +++++ + K A+ L N T+ + +LS
Sbjct: 548 KRREEKLAKKGPTTSTSSSRKRRRKFNRNGRSAAIKAAASKLSENEDETTKGSQNEVELS 607
Query: 64 NV--IVRRSAHGRLKRDLDSASNLTAVKTDANVTKSSGRKSMNA 105
+ ++R HG++K+ S N T K + KS+++
Sbjct: 608 DAKDVIRTPEHGKIKKSECSEENQTTEVMADRTRKKAIDKSIDS 651
>SB_39249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 2 QGQRKKNKLSFKGPDSADRETVEKQQRDFQY 32
Q QRK+NKL K P + DR E+Q + Y
Sbjct: 6 QAQRKENKLKKKSPLAWDRTRSEEQNGNHTY 36
>SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30)
Length = 1093
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 39 KLNANVLDINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDLDSASNLTAVKTDANVTKSS 98
K++ N + + N+ TSL+R LSN R + R+ ++ SN ++ T A T +
Sbjct: 91 KIDRNTMCVTNQSTSLSRTPSLSLSNGAKTRPYVSKRLRNNETISNPGSLITKAKSTDET 150
Query: 99 G 99
G
Sbjct: 151 G 151
>SB_50276| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1048
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 1 MQGQRKKNKLSFKGPDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDE 60
+QG++ ++S + + D E+++ ++ +T K+N V +N LN+ +
Sbjct: 242 LQGKKCPGEMSEEASATTDTESIKSKKSGD----LTSSKVNQQV-GSSNEDEKLNKAL-- 294
Query: 61 KLSNVIVRRSAHGRLKRDLDSASNL 85
KL NVI + ++KR L S S L
Sbjct: 295 KLMNVIASKGGSEKVKRLLQSPSPL 319
>SB_10216| Best HMM Match : RVT_1 (HMM E-Value=0.00039)
Length = 566
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 34 VMTIKKLNANVLDINNRITSLNRFIDEKLSNVIVRRSAHGR---LKRDLDSASNLTAVKT 90
V+T KL NVL + R+ SL + +EK + + R H + LK L +LT K
Sbjct: 160 VLTEHKLKKNVLSLKRRVKSLAEYNEEKDNQISDRVLLHIQDKVLKAKLYREEDLTRNKL 219
Query: 91 DANVTKSSGRKSM 103
VT + R ++
Sbjct: 220 VDIVTTYNDRGAL 232
>SB_433| Best HMM Match : DUF883 (HMM E-Value=0.75)
Length = 386
Score = 28.3 bits (60), Expect = 4.9
Identities = 31/170 (18%), Positives = 70/170 (41%), Gaps = 10/170 (5%)
Query: 6 KKNKLSFKGPDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNV 65
++N P D T+++ +R VV+ +K++ + + LN + + N
Sbjct: 10 RENPFEPVDPGGDDEATLDEYER----VVVKLKRMGGKSYRLFDAGGELNEKLPSSIKNN 65
Query: 66 I---VRRSAHGRLKRDLDSASNLTAVKTDANVTKSSGRKSMNAPGAPNILKEKLLSYLDD 122
+ H + L ++T + R+ + A A + + L ++
Sbjct: 66 LGTSAEEIIHSNEEEVAKREEKLRQLETKRTEVPENQREGIGAQIAETQSEIEQLERENE 125
Query: 123 AFGDIKNKMAVLNVVKMSYKNNGYFKIGYITASLDTLKVYLDNMKQDMNA 172
A I+ +M++ + VK +K G+ I +TA + V + N+K+ + +
Sbjct: 126 A---IEERMSLKDRVKAIFKKYGFTTIAVVTAVGVVIGVIVSNLKKGLTS 172
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 28.3 bits (60), Expect = 4.9
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Query: 4 QRKKNKLSFKGPDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLS 63
++K +KLS P D ET+E+Q D +K+L V DI+ I LN D+K
Sbjct: 4082 EKKADKLS---PVGTDVETIEQQMDD-------LKELQKEVEDIDELIADLN---DQKYR 4128
Query: 64 NVIVRRSAH-GRLKRDLDSASNLTAVKTDANVTKSSG-RKSMNAPGAPNILKEKLLSYLD 121
+ +A + + S AV A V + S +++ G N + LL +L
Sbjct: 4129 VALQNPTADTSAIDNTIAELSQRLAVAKHALVERQSRLEQALLQFGKFNDAMQSLLDWLA 4188
Query: 122 DAFGDIKNKMAV 133
+ I+N+ V
Sbjct: 4189 ETREHIENQGTV 4200
>SB_50413| Best HMM Match : GRP (HMM E-Value=0.15)
Length = 487
Score = 27.9 bits (59), Expect = 6.4
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 10/112 (8%)
Query: 89 KTDANVTKSSGRKSMNAPGAPNILKEKLLSYLDDAFGDIKNKMAVLNVVKMSYKNNGYFK 148
K+D N+ + + RK + + + KE+L L+ D+K K A L Y++ Y K
Sbjct: 46 KSDKNM-REAHRKQIQEISSKH--KEELQQQLERFHQDLKKKDAKLKTTSQEYEDRLY-K 101
Query: 149 IGYITASLDTLKVYLDNMKQDMNANKEFW------DDKRVLNLFDKLKAADN 194
A L ++ L+N ++++ + + RVL L +K A+ N
Sbjct: 102 TQEKLAELSNVRQQLENERENLTIRMQNMMQTHCEEALRVLGLTNKSPASSN 153
>SB_29136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 80 DSASNLTAVKTDANVTKSSGRKSMNAPGAPNILKEKLLSYLDDAF-----GDIKNKMAVL 134
+ A NL V+ TK++ PN LK + ++Y+D D++N +L
Sbjct: 48 EGAGNLVRVEPTGRTTKTTENPKARTAKRPNNLKAQ-IAYMDSWHDPGHDADLQNPQGIL 106
Query: 135 NVVK 138
VVK
Sbjct: 107 RVVK 110
>SB_5796| Best HMM Match : RIO1 (HMM E-Value=0)
Length = 1329
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 2 QGQRKKNKLSFKGPDSADRETVEKQQRDFQYVVMTIKKLNANVL-DINNRITS 53
+ RKK+ + D ADR TVE Q D + ++ K LN ++ +IN I++
Sbjct: 158 EANRKKDNEKVRSKDKADRATVE-QVLDPRTRMIIFKLLNKGIISEINGCIST 209
>SB_44831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 27.5 bits (58), Expect = 8.5
Identities = 25/147 (17%), Positives = 61/147 (41%), Gaps = 6/147 (4%)
Query: 29 DFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNVI---VRRSAHGRLKRDLDSASNL 85
+++ VV+ +K++ + + LN + + N + H + L
Sbjct: 269 EYERVVVKLKRMGGRAYRLFDAGGELNEKLPPSIKNNLGPSAEEIIHSNEEEVAKREEKL 328
Query: 86 TAVKTDANVTKSSGRKSMNAPGAPNILKEKLLSYLDDAFGDIKNKMAVLNVVKMSYKNNG 145
++T R+ + A A + + + L ++ I+ +M++ + VK +K G
Sbjct: 329 RQLETKRTEVPEDQREGIGAQIAETLSEIEQLERENEV---IEERMSLKDRVKAIFKKYG 385
Query: 146 YFKIGYITASLDTLKVYLDNMKQDMNA 172
+ I +TA + V + N+K+ + +
Sbjct: 386 FTTIAVVTAVGVVIGVIVSNLKKGLTS 412
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.131 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,104,167
Number of Sequences: 59808
Number of extensions: 229269
Number of successful extensions: 964
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 954
Number of HSP's gapped (non-prelim): 22
length of query: 208
length of database: 16,821,457
effective HSP length: 79
effective length of query: 129
effective length of database: 12,096,625
effective search space: 1560464625
effective search space used: 1560464625
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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