Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001815-TA|BGIBMGA001815-PA|undefined
(208 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 31 0.60
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 31 0.60
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 31 0.60
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 29 1.8
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 29 1.8
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 29 1.8
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 29 1.8
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 29 2.4
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 29 2.4
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 29 2.4
Z69787-4|CAA93639.1| 305|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 29 3.2
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 28 4.2
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 28 4.2
AL110485-27|CAB60359.3| 779|Caenorhabditis elegans Hypothetical... 28 5.6
AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical ... 28 5.6
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81128-7|CAB03400.1| 898|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81092-2|CAB03145.2| 702|Caenorhabditis elegans Hypothetical pr... 27 7.4
U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical pr... 27 7.4
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 27 7.4
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 27 9.7
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 9.7
AC026301-8|AAK68889.1| 302|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 31.1 bits (67), Expect = 0.60
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 43 NVLDINNRITSLNRFIDEKLSNVI---VRRSAHGRLKRDLDS----ASNLTAVKTDANVT 95
N D+ N+ + RF + S VI +RR+AH ++ D A + + ++ A+
Sbjct: 1565 NFADVKNKFLA-RRFKLLEQSLVIEEQLRRAAHINKQQSPDQVGQLAQHFSELEHTADAH 1623
Query: 96 KSSGRKSMNAPGAPNILKEKLLSYLDDAFGDIKNKMAVL 134
+ R+S N N + K L+ LDD D+K +A L
Sbjct: 1624 VNIARESNNGNRNANAILHKCLAQLDDLLSDLKTDVARL 1662
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 31.1 bits (67), Expect = 0.60
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 43 NVLDINNRITSLNRFIDEKLSNVI---VRRSAHGRLKRDLDS----ASNLTAVKTDANVT 95
N D+ N+ + RF + S VI +RR+AH ++ D A + + ++ A+
Sbjct: 1565 NFADVKNKFLA-RRFKLLEQSLVIEEQLRRAAHINKQQSPDQVGQLAQHFSELEHTADAH 1623
Query: 96 KSSGRKSMNAPGAPNILKEKLLSYLDDAFGDIKNKMAVL 134
+ R+S N N + K L+ LDD D+K +A L
Sbjct: 1624 VNIARESNNGNRNANAILHKCLAQLDDLLSDLKTDVARL 1662
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 31.1 bits (67), Expect = 0.60
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 43 NVLDINNRITSLNRFIDEKLSNVI---VRRSAHGRLKRDLDS----ASNLTAVKTDANVT 95
N D+ N+ + RF + S VI +RR+AH ++ D A + + ++ A+
Sbjct: 1565 NFADVKNKFLA-RRFKLLEQSLVIEEQLRRAAHINKQQSPDQVGQLAQHFSELEHTADAH 1623
Query: 96 KSSGRKSMNAPGAPNILKEKLLSYLDDAFGDIKNKMAVL 134
+ R+S N N + K L+ LDD D+K +A L
Sbjct: 1624 VNIARESNNGNRNANAILHKCLAQLDDLLSDLKTDVARL 1662
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 29.5 bits (63), Expect = 1.8
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 4 QRKKNKLSFKGPDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLS 63
QR++++L K + ++RE EK++RD + A + D+ R N+ I E
Sbjct: 656 QRQRDELDRKAQELSEREMREKERRDRERA-----NEEAQLADLLER-ERHNQLIRENER 709
Query: 64 NVIVRRSAHGRL--KRDLDSASNLTAVKTDANVTKSSGRKSMNAPGAPNILKEKLLS 118
V R+ + RL +R D ++ +++ + R+ + A N K LLS
Sbjct: 710 REAVERANNRRLEDRRSRDKLDHIVRERSEKEQFELEKRRLLAEKEAMNRKKNHLLS 766
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 29.5 bits (63), Expect = 1.8
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 4 QRKKNKLSFKGPDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLS 63
QR++++L K + ++RE EK++RD + A + D+ R N+ I E
Sbjct: 656 QRQRDELDRKAQELSEREMREKERRDRERA-----NEEAQLADLLER-ERHNQLIRENER 709
Query: 64 NVIVRRSAHGRL--KRDLDSASNLTAVKTDANVTKSSGRKSMNAPGAPNILKEKLLS 118
V R+ + RL +R D ++ +++ + R+ + A N K LLS
Sbjct: 710 REAVERANNRRLEDRRSRDKLDHIVRERSEKEQFELEKRRLLAEKEAMNRKKNHLLS 766
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 29.5 bits (63), Expect = 1.8
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 4 QRKKNKLSFKGPDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLS 63
QR++++L K + ++RE EK++RD + A + D+ R N+ I E
Sbjct: 656 QRQRDELDRKAQELSEREMREKERRDRERA-----NEEAQLADLLER-ERHNQLIRENER 709
Query: 64 NVIVRRSAHGRL--KRDLDSASNLTAVKTDANVTKSSGRKSMNAPGAPNILKEKLLS 118
V R+ + RL +R D ++ +++ + R+ + A N K LLS
Sbjct: 710 REAVERANNRRLEDRRSRDKLDHIVRERSEKEQFELEKRRLLAEKEAMNRKKNHLLS 766
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 29.5 bits (63), Expect = 1.8
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 4 QRKKNKLSFKGPDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLS 63
QR++++L K + ++RE EK++RD + A + D+ R N+ I E
Sbjct: 656 QRQRDELDRKAQELSEREMREKERRDRERA-----NEEAQLADLLER-ERHNQLIRENER 709
Query: 64 NVIVRRSAHGRL--KRDLDSASNLTAVKTDANVTKSSGRKSMNAPGAPNILKEKLLS 118
V R+ + RL +R D ++ +++ + R+ + A N K LLS
Sbjct: 710 REAVERANNRRLEDRRSRDKLDHIVRERSEKEQFELEKRRLLAEKEAMNRKKNHLLS 766
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/65 (26%), Positives = 34/65 (52%)
Query: 20 RETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDL 79
++ +EK++ D V I+++ NV +TSL DE++ + + + +K+D
Sbjct: 361 KQELEKERDDALADVQKIREVKRNVERELQSLTSLMAERDEQIEELKTKMFSFEMIKKDH 420
Query: 80 DSASN 84
+SA N
Sbjct: 421 ESAKN 425
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 9 KLSFKGPDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNVIVR 68
+L +S +R + E + + Q TIKKLNA++ I SL I EK S +I R
Sbjct: 544 ELELSSKESENRSSEELEVDELQLSNATIKKLNADLSTKAGLIRSLEDSI-EKKSQMITR 602
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 9 KLSFKGPDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNVIVR 68
+L +S +R + E + + Q TIKKLNA++ I SL I EK S +I R
Sbjct: 544 ELELSSKESENRSSEELEVDELQLSNATIKKLNADLSTKAGLIRSLEDSI-EKKSQMITR 602
>Z69787-4|CAA93639.1| 305|Caenorhabditis elegans Hypothetical
protein C44C10.5 protein.
Length = 305
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 64 NVIVRRSAHGRLKRDLDSASNLTAVKTDANVTKSSGRKSMNAPGAPNILKEKLLSYLD 121
N + R+S +L ++ +N+ A K VTKS K++ P + K + S LD
Sbjct: 65 NDLERKSLEKKLTKEQVKLTNIKASKQSQKVTKSDDPKAIAKQAPPAMFKVQGCSRLD 122
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 40 LNANVLDINNRITSLNRFIDEKLSNVI-VRRSAHGRLKRDLDSASNLTAVKTDAN 93
L+ +L R+ +LN I ++ V+ + HG + D D AS + ++ AN
Sbjct: 591 LSQTILKFRERMANLNSQIQDQKDQVLSLEEQLHGHISVDNDRASMVNQLQISAN 645
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 28.3 bits (60), Expect = 4.2
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 19 DRETVEKQQRDFQYVVMTIKKLNANVLDINNRITS-LNRFIDEKLSNVIVRRSAHGRLKR 77
DRE EKQ+ Q M K ++ D NR+ S +N E + I + RLK
Sbjct: 26 DREQNEKQELFMQINSMIAKLADSGDQDEINRLKSDVNSLKRELEAEKIASNAEAARLKS 85
Query: 78 DLDSASN 84
+L A N
Sbjct: 86 ELQKAKN 92
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 28.3 bits (60), Expect = 4.2
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 19 DRETVEKQQRDFQYVVMTIKKLNANVLDINNRITS-LNRFIDEKLSNVIVRRSAHGRLKR 77
DRE EKQ+ Q M K ++ D NR+ S +N E + I + RLK
Sbjct: 26 DREQNEKQELFMQINSMIAKLADSGDQDEINRLKSDVNSLKRELEAEKIASNAEAARLKS 85
Query: 78 DLDSASN 84
+L A N
Sbjct: 86 ELQKAKN 92
>AL110485-27|CAB60359.3| 779|Caenorhabditis elegans Hypothetical
protein Y46G5A.17 protein.
Length = 779
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 147 FKIGYITASLDTLKVYLDNMKQ-DMNANKEFWDD-KRVLNLFDKLKAADNA 195
+ + YI A DTL ++ + + D +++EF ++ KR LN KL A A
Sbjct: 724 YGVSYIVAGEDTLSFHISSKRSADNTSSREFREELKRSLNDMKKLAEAIEA 774
>AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical
protein Y55B1BR.4 protein.
Length = 567
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/70 (25%), Positives = 29/70 (41%)
Query: 89 KTDANVTKSSGRKSMNAPGAPNILKEKLLSYLDDAFGDIKNKMAVLNVVKMSYKNNGYFK 148
K V +S +S +A + NI + + AF D++ + + N +M K GY
Sbjct: 469 KHTREVYRSQTTRSHSAASSSNISQNTAATSAARAFSDVEIRQIIDNSAQMEQKYRGYCD 528
Query: 149 IGYITASLDT 158
LDT
Sbjct: 529 AIIRNVDLDT 538
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 27.5 bits (58), Expect = 7.4
Identities = 19/94 (20%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 23 VEKQQRDFQY-VVMTIKKLNANVLDINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDLDS 81
+E+++ D + V T ++N + +N+ + +K+S + + G +K +
Sbjct: 121 LEEEKFDINFGVSQTEAEINQLTIQVNDLRGKFVKPTLKKVSKYDNKFKSSGEVKEKSNF 180
Query: 82 ASNLTAVKTDANVTKSSGRKSMNAPGAPNILKEK 115
+NL VK + ++ + +K A G P K++
Sbjct: 181 RNNLKVVKKETDLDEIMAKKKGTADGKPEWSKKE 214
>Z81128-7|CAB03400.1| 898|Caenorhabditis elegans Hypothetical
protein T23D8.7 protein.
Length = 898
Score = 27.5 bits (58), Expect = 7.4
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 37 IKKLNANVLDINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDLDSASNLTAVKTDANVTK 96
IKKLN I N I + +R E+ + V+ S RLK D D + +K +A + K
Sbjct: 408 IKKLNEQ--QIANLIRATSRNATERQNAVM---SLQNRLKMDNDVNAVKFGLKVEAQLLK 462
Query: 97 SSGRKSMNAP----GAPNILKEKLLSYLDDAFGDIKNK 130
GR + P +PN+ +++ ++ ++ D++ K
Sbjct: 463 IEGR-VLPVPRLLYRSPNLKRQECVTVPNNGTWDMRGK 499
>Z81092-2|CAB03145.2| 702|Caenorhabditis elegans Hypothetical
protein F58D12.3 protein.
Length = 702
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 112 LKEKLLSYLDDAFGDIKNKMAVLNVVKMSYKNNG 145
++EK YL++ D+ M LN V + Y+ NG
Sbjct: 538 VREKSELYLNELIKDVSALMEKLNTVPLKYRANG 571
>U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical
protein C24A3.1 protein.
Length = 638
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 19 DRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNVI-VRRSAHGRLKR 77
+ E+ Q RDF + + ++A ++ +NN I+ L +D ++++++ + R
Sbjct: 133 NNESSGVQSRDFDDIRRQMNGVDAKLMIMNNDISGLRNSMDRQVTDLMHINNEMKSRPVV 192
Query: 78 DLDSASNLTA 87
D SN T+
Sbjct: 193 DPSKISNATS 202
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 27.5 bits (58), Expect = 7.4
Identities = 19/94 (20%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 23 VEKQQRDFQY-VVMTIKKLNANVLDINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDLDS 81
+E+++ D + V T ++N + +N+ + +K+S + + G +K +
Sbjct: 121 LEEEKFDINFGVSQTEAEINQLTIQVNDLRGKFVKPTLKKVSKYDNKFKSSGEVKEKSNF 180
Query: 82 ASNLTAVKTDANVTKSSGRKSMNAPGAPNILKEK 115
+NL VK + ++ + +K A G P K++
Sbjct: 181 RNNLKVVKKETDLDEIMAKKKGTADGKPEWSKKE 214
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 134 LNVVKMSYKNNGYFKIGYITASLDTLKVYLDNMKQDMNANKEFWDDKRVLNLFDKLKAAD 193
LN + SYK+ Y ++ ++SL L+ K D++A K D + NL ++
Sbjct: 116 LNKLYESYKSGQYSQMKARSSSLSELRAAFIRSKSDVSAQKPI--DAELANLMGRVVVDI 173
Query: 194 NAVNG 198
A+ G
Sbjct: 174 KAIVG 178
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 136 VVKMSYKNNGYFKIGYITASLDTLKVYLDNMKQDMNANKEFWDDKRVLNLFDK 188
+V +NNG +G + LK+ DM+ANKE D V N+ D+
Sbjct: 1498 LVSNKCRNNGIVGLGLCFVE-ENLKINRFRSAFDMSANKEIRDGPPVWNIGDE 1549
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 46 DINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDLDSASNLTAVKTDANV 94
++ NRI + +D+ V H +LK+D+DS + V TD N+
Sbjct: 1688 ELTNRIEQVEVELDKHRDKVPSLVEQHEQLKKDIDSFLLVLDVFTDRNL 1736
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 46 DINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDLDSASNLTAVKTDANV 94
++ NRI + +D+ V H +LK+D+DS + V TD N+
Sbjct: 1688 ELTNRIEQVEVELDKHRDKVPSLVEQHEQLKKDIDSFLLVLDVFTDRNL 1736
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 6 KKNKLSFKGPDSADRETVEKQ 26
K+N L ++ P++ADRE KQ
Sbjct: 74 KRNSLDYEDPETADREMAMKQ 94
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 46 DINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDLDSASNLTAVKTDANV 94
++ NRI + +D+ V H +LK+D+DS + V TD N+
Sbjct: 1688 ELTNRIEQVEVELDKHRDKVPSLVEQHEQLKKDIDSFLLVLDVFTDRNL 1736
>AC026301-8|AAK68889.1| 302|Caenorhabditis elegans Hypothetical
protein Y54F10BM.10 protein.
Length = 302
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 118 SYLDDAFGDIKNKMAVLNVVKMSYKNNGYFKIGYITASLDTLKVYLDNMKQDMNANK-EF 176
+YL A D++ + ++++ ++ KN ++ Y +D LKV +++ N EF
Sbjct: 100 NYLKFALKDLETVLKHVSILYITNKNESGYQQNYSEPLIDLLKVKKPVYVEELRLNGFEF 159
Query: 177 WDDKRVLNLFD 187
D ++L F+
Sbjct: 160 NDVLKILPYFN 170
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.131 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,735,427
Number of Sequences: 27539
Number of extensions: 193775
Number of successful extensions: 661
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 648
Number of HSP's gapped (non-prelim): 28
length of query: 208
length of database: 12,573,161
effective HSP length: 78
effective length of query: 130
effective length of database: 10,425,119
effective search space: 1355265470
effective search space used: 1355265470
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
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