GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001815-TA|BGIBMGA001815-PA|undefined
         (208 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    30   0.018
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   2.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   3.7  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   3.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.4  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 29.9 bits (64), Expect = 0.018
 Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 4/98 (4%)

Query: 45  LDINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDLDSASNLTAVKTDANVTKSSGRKSMN 104
           LDI++ +    R   +   ++++    +G L  D +    +  +  + + T +SG     
Sbjct: 305 LDIDDDVGEKKR---QAFLDLLIEAGQNGVLLTDKEVKEQVDTIMFEGHDTTASGSSFFL 361

Query: 105 AP-GAPNILKEKLLSYLDDAFGDIKNKMAVLNVVKMSY 141
           A  G    ++EK++  LD+ FGD        + ++M Y
Sbjct: 362 AVMGCHPDIQEKVIQELDEIFGDSDRPATFQDTLEMKY 399


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 119 YLDDAFGDIKNKMAVLNVVKMSYKNN 144
           Y D  FG  + + A +   + +YKNN
Sbjct: 40  YFDYNFGSDEKRQAAIQSGEYNYKNN 65


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 39  KLNANVLDINNRITSLNRFIDEKLSNVIV 67
           +L  NV+  N  +    RF+DE  +N+ +
Sbjct: 326 QLIENVIPSNEELICDKRFVDESANNLSI 354


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 39  KLNANVLDINNRITSLNRFIDEKLSNVIV 67
           +L  NV+  N  +    RF+DE  +N+ +
Sbjct: 341 QLIENVIPSNEELICDKRFVDESANNLSI 369


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 121 DDAFGDIKNKMAVLNVVKMSYKNNGY 146
           DDAF  I N+  +L  +  +  +N Y
Sbjct: 476 DDAFIGIVNQFHILQFITKNGTSNNY 501


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.131    0.355 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,528
Number of Sequences: 429
Number of extensions: 2456
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 208
length of database: 140,377
effective HSP length: 55
effective length of query: 153
effective length of database: 116,782
effective search space: 17867646
effective search space used: 17867646
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)