Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001814-TA|BGIBMGA001814-PA|IPR001810|Cyclin-like F-box
(684 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626... 36 0.081
07_03_1228 - 25009736-25010965 36 0.14
03_05_0588 + 25883705-25883856,25884201-25884422,25885660-258857... 35 0.19
08_01_0626 - 5445676-5446687,5447099-5447430 35 0.25
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 34 0.43
05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281... 33 0.75
03_05_0028 - 19988940-19989477,19989631-19989673,19990956-199910... 33 0.75
02_01_0386 + 2799022-2799293,2801419-2803000,2803351-2803404 33 1.00
06_03_1234 - 28586365-28587973,28590411-28590694 32 1.7
05_07_0143 + 28000038-28000211,28002217-28002230,28002713-280027... 32 1.7
01_06_1374 + 36740860-36741365,36742529-36743003,36743084-36743890 32 1.7
08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-26... 31 2.3
11_06_0520 + 24539403-24539603,24539919-24540325,24541002-245411... 31 3.0
11_06_0361 - 22711200-22712180,22712523-22712729,22715205-227159... 31 3.0
11_01_0343 - 2551995-2552951 31 3.0
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 31 3.0
05_07_0174 + 28156399-28156525,28157094-28157155,28157428-28158615 31 3.0
05_03_0582 - 15738503-15739301,15739385-15739642,15740585-157406... 31 4.0
03_06_0220 + 32452831-32452944,32453618-32453911,32454416-324545... 31 4.0
12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045 30 5.3
12_01_0631 - 5234452-5234468,5234536-5234839,5234926-5235810 30 5.3
10_08_0545 - 18673640-18674249,18674579-18674934 30 5.3
08_01_0831 + 8086470-8087354,8087441-8087730,8096373-8096412,809... 30 5.3
06_03_0573 + 22407489-22408373,22408460-22408795 30 5.3
03_03_0153 - 14910420-14910769,14910946-14911008,14911084-149113... 30 5.3
08_02_0909 - 22515326-22515418,22515992-22516150,22516583-225166... 30 7.0
12_01_0441 + 3484003-3484374,3485071-3485151,3485242-3485514,348... 29 9.3
11_06_0048 - 19614636-19616076,19618621-19618992,19619057-19619451 29 9.3
11_01_0336 - 2517349-2518725 29 9.3
10_02_0098 + 5286827-5287019,5287380-5287476,5287872-5287992,528... 29 9.3
04_01_0451 + 5845249-5846133,5846220-5846509,5855590-5856060,585... 29 9.3
03_06_0141 - 31955782-31956801 29 9.3
>12_02_0973 +
24959440-24959451,24959962-24962195,24962539-24962653,
24963146-24963943,24964140-24964422,24964500-24964951,
24965744-24965870,24965950-24966074,24966188-24966858,
24966976-24967093,24967177-24967293,24967564-24967658,
24968152-24968303,24968858-24968913,24969001-24969218,
24969842-24970239,24970345-24970628,24970730-24970836,
24970882-24970968,24971729-24971990,24972228-24972503,
24973197-24973254,24973437-24973756,24973889-24973999,
24974183-24974350,24974494-24974622,24974731-24974820,
24974934-24975040,24975133-24975281,24975584-24975666,
24975749-24975844,24975957-24976079,24976180-24976263,
24976371-24976511,24976652-24976951,24977386-24977453,
24977540-24977642,24979363-24979524,24979613-24981230,
24981270-24981661,24981689-24981991,24982078-24982161,
24982296-24982448,24982678-24982841,24982915-24983062,
24983209-24983331,24983409-24983496,24983686-24983867
Length = 4177
Score = 36.3 bits (80), Expect = 0.081
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 96 EAAGCLGHMNCKHKEE-EPTDLTINSLYAGVLGNPEQSSNGDLNQAVRGTIFSSGPVAQI 154
E C + + K + EPT + +++ G++ NP SN D+N T+F +
Sbjct: 838 ETVDCYTELVAEMKLDLEPTHIIVSASRDGLIFNPAMFSNSDINYISSSTVFEGVAALES 897
Query: 155 YDSIPRGVCYNALPEAVGKQLSGD 178
D + G+ +++ ++ L G+
Sbjct: 898 LDILALGIWFSSRSSSLKLLLDGE 921
>07_03_1228 - 25009736-25010965
Length = 409
Score = 35.5 bits (78), Expect = 0.14
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 461 PENGGGEQNDVKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQNI 517
PE GG E+ + + +E E +GA +DD + + ++++ E+ EN+E ++ +
Sbjct: 329 PEEGG-EEEEEEEEEEEEEEPEEGAEEEEDDEEEDEEEEEEEEDIEEDENEEEEEEV 384
Score = 29.9 bits (64), Expect = 7.0
Identities = 12/55 (21%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 461 PENGGGEQNDVKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQ 515
PE GG E+ + + +E E + +++ +P + +++ E+ E +EP++
Sbjct: 297 PEEGGEEEEE-EEEEEEEEEEEEPEEGGEEEEEPEEGGEEEEEEEEEEEEEEPEE 350
>03_05_0588 +
25883705-25883856,25884201-25884422,25885660-25885759,
25885897-25886148
Length = 241
Score = 35.1 bits (77), Expect = 0.19
Identities = 34/96 (35%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 17 ELLDLSDDVLLCILKYCTPRDLKALGYTCPRLGALVVDRTLWESVDARESPSGP--KRLR 74
E L L DDVL IL PR L A C A++ DR L + S P + L
Sbjct: 2 EQLLLPDDVLANILGRLPPRSLAAARCVCADWRAVIDDRRLLRTDLLPLSELNPIVQELE 61
Query: 75 W----LLTHGLSSTTSELMLCGYAR--EAAGCLGHM 104
W L+T SS T + R EAAG +GH+
Sbjct: 62 WPPSRLITRVFSSATKRWEDRPFVREGEAAGTVGHL 97
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 34.7 bits (76), Expect = 0.25
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 608 SNLRILSLTGFRNITNRSLVHLATAAPRLRFIDFSGTRVTQRGVDTFRSLRPDCE--IIY 665
S+L+ + L RN SL LAT P L I+ SG +++ + RP + I+
Sbjct: 113 SSLKSIRLIACRNFWEPSLAELATQCPLLEEIECSGNKMSSEFLVYVGRARPQLKRLKIH 172
Query: 666 SQYIDRNASEGDM 678
++ D +A E +M
Sbjct: 173 MRWFDEDAMESEM 185
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 33.9 bits (74), Expect = 0.43
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 475 EPRPEAV----NQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQNIL 518
EP PEAV N ASTS DD + S K +K+G + +E +L
Sbjct: 283 EPEPEAVKDVGNVAASTSVDDAEGKKSKKKKKKSGRTAQEEEDLDKLL 330
>05_01_0360 +
2814139-2814627,2815203-2815334,2815480-2815583,
2816180-2816292,2818409-2818506,2818636-2818815,
2818893-2819114,2819270-2819404,2819489-2819771,
2819858-2819931,2820164-2820384,2820463-2820550,
2820651-2820744,2820827-2821015,2821369-2821400,
2821542-2821621,2821718-2821807,2821911-2821980,
2822240-2822285,2822370-2822428,2822588-2822753,
2822929-2823107,2823186-2823392,2823529-2823633,
2823701-2823703
Length = 1152
Score = 33.1 bits (72), Expect = 0.75
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 462 ENGGGEQNDVKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKE 512
E G GE+ + ++DE EAV GA DD + ++++ + TE+ E
Sbjct: 100 EQGAGEEEEEEVDEEEIEAVTTGAGGDDDDEEVGDDGGAEEES-QSTEDDE 149
>03_05_0028 -
19988940-19989477,19989631-19989673,19990956-19991037,
19991063-19991122
Length = 240
Score = 33.1 bits (72), Expect = 0.75
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 193 LTQNLLTSLEQQCPNLTTLALDYCNIDCSMRAI-CHFPRRLKVLSLRGSKCYNQPLDKSF 251
+ ++L+ + Q CP+ L + +D M +I C+ RLK L + N + +
Sbjct: 101 INHDVLSHVHQCCPDFLELKVFALYVDEEMASIICNSLPRLKKLEIP-----NSDMSCAA 155
Query: 252 LFKIQDYLKELEELDVSECE 271
+ K D L+ELE LD+S E
Sbjct: 156 IIKFLDCLEELEYLDISGYE 175
>02_01_0386 + 2799022-2799293,2801419-2803000,2803351-2803404
Length = 635
Score = 32.7 bits (71), Expect = 1.00
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 5 PSSENGGYAGSAELLDLSDDVLLC--ILKYCTPRDLKALGYTCPRLGALVVDRTLWESV 61
PS G+ L L D +LC IL +PRD+ ++ C RL L + LW V
Sbjct: 197 PSPMGKGFCSEHSDLFLLSDEVLCQKILSRLSPRDIASVNSVCKRLYHLTRNDDLWRMV 255
>06_03_1234 - 28586365-28587973,28590411-28590694
Length = 630
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 16 AELLDLSDDVLL-CILKYCTPRDLKALGYTCPRLGALVVDRTLWESV 61
+ L L+D+VL IL +PRD+ ++ C RL L + LW V
Sbjct: 216 SSLFQLTDEVLCQSILSRLSPRDIASVSSVCRRLYLLTRNEDLWRMV 262
>05_07_0143 +
28000038-28000211,28002217-28002230,28002713-28002788,
28003304-28003865,28004476-28004761,28004848-28005118,
28005478-28005633,28005871-28006368,28006809-28007093
Length = 773
Score = 31.9 bits (69), Expect = 1.7
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 15/122 (12%)
Query: 79 HGLSSTTSELMLCGYAREAAGCLGHMNCKHKEEEPTDLTINSLYAGVLGNPEQSSNGDLN 138
HG S T +L + + +G K +P +T + Y G + + N +L
Sbjct: 89 HGWSGTPGQLSMADIVK-----MGRPQVKQSSSKPA-VTADKGYTGQYPSLPSTVNQNLK 142
Query: 139 QAVRGTIFSSGPVAQIY---DSI-PRGVCYNALPEAVGKQL-SGDWAPPDDTCPGPQFTL 193
Q+ T+ + P ++ DSI P+ ++A AV KQ DW P D+ PG Q L
Sbjct: 143 QSA-STVSPTNPDQGLHSAQDSIHPKDHNHSA---AVNKQAYDNDWLPQDEPPPGNQSAL 198
Query: 194 TQ 195
+
Sbjct: 199 PE 200
>01_06_1374 + 36740860-36741365,36742529-36743003,36743084-36743890
Length = 595
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 584 SDNINYINIGPNGQHDQPATR--PDRSNLRILSLTGFRNITNRSLVHLATAAPRLRFIDF 641
S NI Y+ +G G+ D R +NL+ L L + R+L P LR+I
Sbjct: 465 SGNIQYMLLGNVGESDHGLIRFAVGCTNLQKLELRSCC-FSERALSLAVLQMPSLRYIWV 523
Query: 642 SGTRVTQRGVDTFRSLRP 659
G R +Q G+D RP
Sbjct: 524 QGYRASQTGLDLLLMARP 541
>08_01_0036 -
267236-268165,268255-268299,268485-268574,269485-269805,
269895-270098,271532-271664,271810-271881,273106-273168,
273252-275034,275169-275217
Length = 1229
Score = 31.5 bits (68), Expect = 2.3
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Query: 10 GGYAGSAELLDLSDDVLLCILKYCTPRDLKALGYTCPRL-GALVVDRTLWESVDARESPS 68
G G+ +L L +DVL I + PRDL AL L A+ W + R P+
Sbjct: 64 GEVDGAELILSLPEDVLGLISAHLRPRDLLALSAASRSLRNAVSTADKAWLAQCRRLLPT 123
Query: 69 GPKRLRWLLTHGLSSTTSELMLCGYAREAAGCLG 102
L W SS L +C + AA LG
Sbjct: 124 ASHLLAWRTALAHSS----LAVCRFLHSAAPLLG 153
>11_06_0520 +
24539403-24539603,24539919-24540325,24541002-24541187,
24541550-24541742,24541945-24542021,24542400-24542550,
24543229-24543462,24543577-24543591
Length = 487
Score = 31.1 bits (67), Expect = 3.0
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 194 TQNLLTSLEQQCPNLTTLALDYCNI--DCSMRAICHFPRRLKVLSLRGSKCYNQPLDKSF 251
T L+S+ + C NLT L L+ C++ D S+ + ++L L + G C N ++ +
Sbjct: 201 TDRSLSSIAKGCKNLTDLILNDCHLLTDRSLEFVARSCKKLARLKING--CQN--METAA 256
Query: 252 LFKIQDYLKELEELDVSECEWVEPS 276
L I + L EL + C ++ S
Sbjct: 257 LEHIGRWCPGLLELSLIYCPRIQDS 281
Score = 29.9 bits (64), Expect = 7.0
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 192 TLTQNLLTSLEQQCPNLTTLALDYCNI-DCSMRAICHFPRRLKVLSLRGSKCYNQPLDKS 250
++T L + + C NL++L L C I D + AI + L+ L+LR D+
Sbjct: 45 SITSTGLVRISENCKNLSSLDLQACYIGDPGLIAIGEGCKLLRNLNLR---FVEGTSDEG 101
Query: 251 FLFKIQDYLKELEELDVSECEWV 273
+ I++ + L L V+ C W+
Sbjct: 102 LIGLIKNCGQSLVSLGVATCAWM 124
>11_06_0361 -
22711200-22712180,22712523-22712729,22715205-22715903,
22717848-22717979,22720422-22721180,22721241-22721453
Length = 996
Score = 31.1 bits (67), Expect = 3.0
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 610 LRILSLTGFRNITNRSLVHLATAAPRLRFIDFSGTRVTQRGVDTFRSLR 658
LR+L L ++TN L + + PRL+F+ G ++ R D+ LR
Sbjct: 762 LRVLDLENASDVTNDDLERVVSL-PRLKFLSLRGCKMVSRLPDSLGGLR 809
>11_01_0343 - 2551995-2552951
Length = 318
Score = 31.1 bits (67), Expect = 3.0
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 10 GGYAGSAELLDLSDDVLLCILKYCTPRDLKALGYTCPRLGALVVDRTLWESV 61
GG G+ + DL DVL +L+ L A+G C L VD+ W +
Sbjct: 10 GGGVGTV-IEDLPTDVLALVLRRLDGASLAAVGCACSSFRELAVDQETWRGL 60
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 31.1 bits (67), Expect = 3.0
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 471 VKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKE 512
V+ +P+PEA + ++ SKD P + + + D K G+ EN+E
Sbjct: 900 VEASKPKPEANGKDSTPSKDSPTVTPTIQEDLKEGQ-PENEE 940
>05_07_0174 + 28156399-28156525,28157094-28157155,28157428-28158615
Length = 458
Score = 31.1 bits (67), Expect = 3.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Query: 47 RLGALVVDRTLWESVDARESPSGPKRLRWLLTHGLSSTTSELMLCG 92
RL ALVV+R+ S+ A P P +L WLL T +L G
Sbjct: 66 RLRALVVNRSWRTSLQALPPPPLPPQLPWLLRPSAGGPTFSCLLSG 111
>05_03_0582 -
15738503-15739301,15739385-15739642,15740585-15740670,
15740879-15740960,15741044-15741213,15742081-15742194,
15742984-15743082,15743171-15743249,15744604-15744710
Length = 597
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 476 PRPEA---VNQGASTSKDDPQPSTSNK 499
P PEA +NQG S + D PQPS SN+
Sbjct: 415 PTPEATTTMNQGGSQANDHPQPSYSNQ 441
>03_06_0220 +
32452831-32452944,32453618-32453911,32454416-32454503,
32454596-32454717,32454985-32455142,32455201-32455273,
32455552-32455640,32455753-32455858,32455967-32456179,
32456726-32456920,32457051-32457128,32457209-32457523
Length = 614
Score = 30.7 bits (66), Expect = 4.0
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 463 NGGGEQNDVKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEP 513
NG D K+ EP G + ++ +PST QKNG+ EP
Sbjct: 567 NGAASTEDEKVAEPNNPTTETGGDATNEEDEPSTKR---QKNGDVGLATEP 614
>12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045
Length = 1294
Score = 30.3 bits (65), Expect = 5.3
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 231 RLKVLSLRGSKCYNQPLDKSFLFKIQDYLKELEELDVSECEWVE 274
RL V+ + KC N L++S L + DY+K + L +S+CE +E
Sbjct: 941 RLLVVVVEECKCLNS-LEESLLVQ-GDYIKSIHVLRISDCEDLE 982
>12_01_0631 - 5234452-5234468,5234536-5234839,5234926-5235810
Length = 401
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 476 PRPEAVNQGAS-TSKDDPQPSTSNKTDQKNGEK 507
PR V G T + DPQP TSN T Q K
Sbjct: 312 PRQHTVQGGGGPTIRSDPQPQTSNPTGQTGSRK 344
>10_08_0545 - 18673640-18674249,18674579-18674934
Length = 321
Score = 30.3 bits (65), Expect = 5.3
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 197 LLTSLEQQCPNLTTLALDYCNIDCSMRAIC-HFPRRLKVLSLRGSKCYNQPLDKSFLFKI 255
++ + + C N L + D AI H P+ LKVLSLR SK + S L +
Sbjct: 163 IMEEIARSCKNFAELKVMGSFDDLFASAIATHLPK-LKVLSLRCSK-----VTMSALLWL 216
Query: 256 QDYLKELEELDVSEC 270
D + LE L++S C
Sbjct: 217 LDNMANLEVLNISHC 231
>08_01_0831 +
8086470-8087354,8087441-8087730,8096373-8096412,
8096878-8096957,8099643-8099733,8099989-8100052,
8100553-8100818
Length = 571
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 476 PRPEAVNQGAS-TSKDDPQPSTSNKTDQKNGEK 507
PR V G T + DPQP TSN T Q K
Sbjct: 312 PRQHTVQGGGGPTIRSDPQPQTSNPTGQTGSRK 344
>06_03_0573 + 22407489-22408373,22408460-22408795
Length = 406
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 476 PRPEAVNQGAS-TSKDDPQPSTSNKTDQKNGEK 507
PR V G T + DPQP TSN T Q K
Sbjct: 312 PRQHTVQGGGGPTIRSDPQPQTSNPTGQTGSRK 344
>03_03_0153 -
14910420-14910769,14910946-14911008,14911084-14911339,
14911432-14911522,14911798-14912096,14912177-14912295,
14922536-14922594,14922676-14922965,14923052-14923567,
14923634-14923936
Length = 781
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 476 PRPEAVNQGAS-TSKDDPQPSTSNKTDQKNGEK 507
PR V G T + DPQP TSN T Q K
Sbjct: 290 PRQHTVQGGGGPTIRSDPQPQTSNPTGQTGSRK 322
>08_02_0909 -
22515326-22515418,22515992-22516150,22516583-22516658,
22517980-22518141,22518826-22519259,22519723-22521414
Length = 871
Score = 29.9 bits (64), Expect = 7.0
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 608 SNLRILSLTGFRNITNRSLVHLATAAPRLRFIDFSGTRVTQRGVDTFRSLRPDCEIIYSQ 667
SNL+ L+ G +T+ S+ +A P+L +D + + R LR C +I
Sbjct: 698 SNLKELAFAGCLQLTSSSIKTIAGNCPQLSSLDL--RNLNRLRDSAMRHLRNGCRLIKKI 755
Query: 668 YIDRNASEGDMAMFR 682
+ RN + D A++R
Sbjct: 756 KLQRN-TFSDEAVYR 769
>12_01_0441 +
3484003-3484374,3485071-3485151,3485242-3485514,
3485695-3485826,3485903-3486076,3486164-3486393,
3486562-3486679,3486717-3486743,3486948-3487079,
3487189-3487323,3487393-3487599,3487772-3487936
Length = 681
Score = 29.5 bits (63), Expect = 9.3
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 316 LKVIDLRESPVGDSEVSSFGWVGSLEE-LYVSPAMEAPAVHK---HAHYIGDNIPEHVEL 371
L++ID R+ + + + +G +E L VSP +E +H H++ + + H EL
Sbjct: 536 LEIID-RKKDIVKLQHGEYVSLGKVEAALIVSPYVENIMIHADPFHSYCVALVVAAHNEL 594
Query: 372 DDWEMEKRIRLDDIPRVC----SCKSVIGN 397
++W ++ + D +C + K V+G+
Sbjct: 595 ENWASQQGVTYTDFVDLCQKPEAVKEVLGS 624
>11_06_0048 - 19614636-19616076,19618621-19618992,19619057-19619451
Length = 735
Score = 29.5 bits (63), Expect = 9.3
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 610 LRILSLTGFRNITNRSLVHLATAAPRLRFIDFSGTRVTQ--RGVDTFRSLRPDC 661
LR+L+L+G + + N + LR+++ S T VT+ R ++ +SL+ C
Sbjct: 403 LRVLNLSGCQKVDNNHCKDICLYWLHLRYLNLSRTSVTEIPREIENLQSLQVLC 456
>11_01_0336 - 2517349-2518725
Length = 458
Score = 29.5 bits (63), Expect = 9.3
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 352 PAVHKHAHYIGDNIPEHVELDDWE--MEKRIRLDDIPRVCSCKSVIGNTPS 400
PAV+ + H+ D + + ++LD +E ME R R ++ + +GNT S
Sbjct: 323 PAVYDYRHWCADELSKEIKLDVFEADMENR-RWSEVEEIGDQAIFLGNTNS 372
>10_02_0098 +
5286827-5287019,5287380-5287476,5287872-5287992,
5288458-5288511,5288868-5288918,5289004-5289099,
5289709-5289807,5289989-5290111,5290666-5290809,
5290902-5290973,5291053-5291128,5291208-5291350,
5291453-5291561,5291629-5291816,5292045-5292134,
5292256-5292438,5293187-5293360,5293466-5293537
Length = 694
Score = 29.5 bits (63), Expect = 9.3
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 10 GGYAGSAELLDLSDDVLLCILKYCTPRDLKALGYTCPRLGALVVDRTLWESVDARESPSG 69
G + ++ L + D V C + Y R L A +TC + + L + VD + S
Sbjct: 308 GSFTKGSKALSVGDKVA-CKVDYAR-RALIAPNHTCTHMLNFALREILGDHVDQKGSIVL 365
Query: 70 PKRLRWLLTHG 80
P++LR+ +HG
Sbjct: 366 PEKLRFDFSHG 376
>04_01_0451 +
5845249-5846133,5846220-5846509,5855590-5856060,
5856898-5857063,5857100-5857498,5858031-5858075
Length = 751
Score = 29.5 bits (63), Expect = 9.3
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 476 PRPEAVNQGASTS-KDDPQPSTSNKTDQKNGEK 507
PR V G S + DPQP TSN T Q K
Sbjct: 312 PRQHTVQGGGGPSIRSDPQPQTSNPTGQIGSRK 344
>03_06_0141 - 31955782-31956801
Length = 339
Score = 29.5 bits (63), Expect = 9.3
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 10 GGYAGSAELLDLSDDVLLCILKYCTPRDLKALGYTCPRLGALVV 53
G + S LLDL DVLL I+ C + +L TC L +++
Sbjct: 36 GDRSSSPSLLDLPLDVLLKIVARCDAATVLSLAATCKALRRIIL 79
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.134 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,807,688
Number of Sequences: 37544
Number of extensions: 898564
Number of successful extensions: 2650
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2623
Number of HSP's gapped (non-prelim): 51
length of query: 684
length of database: 14,793,348
effective HSP length: 87
effective length of query: 597
effective length of database: 11,527,020
effective search space: 6881630940
effective search space used: 6881630940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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