GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001814-TA|BGIBMGA001814-PA|IPR001810|Cyclin-like F-box
         (684 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     30   0.18 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    28   0.71 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           27   1.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.6  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    26   2.9  
AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding pr...    25   6.6  
AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding pr...    25   6.6  

>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 30.3 bits (65), Expect = 0.18
 Identities = 15/50 (30%), Positives = 25/50 (50%)

Query: 604 RPDRSNLRILSLTGFRNITNRSLVHLATAAPRLRFIDFSGTRVTQRGVDT 653
           +PD +NLR+    G+  I +     L   A R+ F+ +SG     R ++T
Sbjct: 499 KPDLTNLRLFXCVGYVLIPSVKRKKLDVKAERMTFVGYSGEHKAYRMLNT 548


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 28.3 bits (60), Expect = 0.71
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 29  ILKYCTPRDLKALGYTCPRLGALVVDRTLWESVDARESPSGPKRLRWLLTHGL 81
           +L    P D++ +GY      AL+V  T  + V AR   +  +  RW+  HGL
Sbjct: 704 VLDVPLPPDVEVIGYADDL--ALLVPATTTDEVRARAEEAVDQVQRWMQQHGL 754


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 27.1 bits (57), Expect = 1.6
 Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 463 NGGGEQNDVKMDEP-RPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKE 512
           NG  + ++  +D+  R   +++   T      PS+++++  +N + TEN E
Sbjct: 498 NGRSDSSESDIDDDCRSPRLDRKRKTGTKKRNPSSNDRSPNQNSDSTENNE 548


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 1.6
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 463  NGGGEQNDVKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEP 513
            NGGG      + + RP + +     SKD    S   +TD     K + KEP
Sbjct: 1051 NGGGGSTAAPLSDSRPVSRSASDEASKDGMVASKEERTDV---VKDDGKEP 1098


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 26.2 bits (55), Expect = 2.9
 Identities = 12/55 (21%), Positives = 27/55 (49%)

Query: 461 PENGGGEQNDVKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQ 515
           PE      + V++   +P  +N G S+S+   Q   S +  Q+  ++ + ++ +Q
Sbjct: 155 PEEDIDHSSFVEVVRRKPRGINSGKSSSQQREQQQRSLQQQQQQQQQQQQQQQEQ 209


>AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding
           protein AgamOBP32 protein.
          Length = 320

 Score = 25.0 bits (52), Expect = 6.6
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 5/57 (8%)

Query: 163 CYNALPEAVGKQLSGDWAPP--DDTCPGPQFTLTQNLLTSLEQQCPNLTTLALDYCN 217
           C N LP  VG+  +G   P   D  C    F L   L +  EQ  P+L  L +  CN
Sbjct: 166 CANMLPLTVGRSCAGGSKPSERDVDCLARCFLLRSGLYS--EQHGPHLDRLYVQ-CN 219


>AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding
           protein AgamOBP33 protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 6.6
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 5/57 (8%)

Query: 163 CYNALPEAVGKQLSGDWAPP--DDTCPGPQFTLTQNLLTSLEQQCPNLTTLALDYCN 217
           C N LP  VG+  +G   P   D  C    F L   L +  EQ  P+L  L +  CN
Sbjct: 166 CANMLPLTVGRSCAGGSKPSERDVDCLARCFLLRSGLYS--EQHGPHLDRLYVQ-CN 219


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.134    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,630
Number of Sequences: 2123
Number of extensions: 30449
Number of successful extensions: 48
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 43
Number of HSP's gapped (non-prelim): 8
length of query: 684
length of database: 516,269
effective HSP length: 69
effective length of query: 615
effective length of database: 369,782
effective search space: 227415930
effective search space used: 227415930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)