Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001814-TA|BGIBMGA001814-PA|IPR001810|Cyclin-like F-box
(684 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 40 0.008
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 40 0.008
Z83108-2|CAB05510.1| 820|Caenorhabditis elegans Hypothetical pr... 33 0.67
AL023828-13|CAA19457.2| 419|Caenorhabditis elegans Hypothetical... 32 1.2
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 31 3.6
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 31 3.6
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 31 3.6
Z92788-8|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 31 3.6
Z92788-7|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 31 3.6
Z92788-5|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 31 3.6
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 31 3.6
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 31 3.6
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 31 3.6
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 31 3.6
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 31 3.6
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 31 3.6
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 31 3.6
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 30 4.7
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 30 4.7
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 30 4.7
AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-relat... 30 4.7
AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 relate... 30 4.7
AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 relate... 30 4.7
AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 relate... 30 4.7
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate... 30 4.7
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 30 4.7
AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical ... 30 4.7
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 30 4.7
AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase prote... 30 4.7
Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical pr... 30 6.2
Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical pr... 30 6.2
AL021446-1|CAA16265.1| 398|Caenorhabditis elegans Hypothetical ... 30 6.2
AC024831-7|AAY86310.1| 711|Caenorhabditis elegans Hypothetical ... 30 6.2
Z93385-5|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 29 8.2
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 29 8.2
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 29 8.2
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 29 8.2
AF022980-2|AAG24188.3| 343|Caenorhabditis elegans Hypothetical ... 29 8.2
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 39.5 bits (88), Expect = 0.008
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 552 RRLDVSSAYQMTRFDPTTLVSDTTVHRFGRADSDNINYINIGPNGQHDQPATRPDR 607
R +++ S +Q L S TV G +D ++ ++ GP+G++D+P PDR
Sbjct: 52 REMNIQSGFQRVIAGGRVLNSTQTVQAAGISDGQTVHLVDRGPSGENDRPNVMPDR 107
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 39.5 bits (88), Expect = 0.008
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 552 RRLDVSSAYQMTRFDPTTLVSDTTVHRFGRADSDNINYINIGPNGQHDQPATRPDR 607
R +++ S +Q L S TV G +D ++ ++ GP+G++D+P PDR
Sbjct: 52 REMNIQSGFQRVIAGGRVLNSTQTVQAAGISDGQTVHLVDRGPSGENDRPNVMPDR 107
>Z83108-2|CAB05510.1| 820|Caenorhabditis elegans Hypothetical
protein F44E5.2 protein.
Length = 820
Score = 33.1 bits (72), Expect = 0.67
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 609 NLRILSLTGFRNITNRSLV----HLATAAPRLRFIDFSGTRVTQRGVDTFRSLRPD 660
+LR+L+++ R SL+ L P LRF+D SGT V + + T ++ P+
Sbjct: 220 SLRVLNISRDRKDFKPSLIMQYIQLKEVLPELRFLDCSGTNVDKESISTIQNSHPN 275
>AL023828-13|CAA19457.2| 419|Caenorhabditis elegans Hypothetical
protein Y17G7B.11 protein.
Length = 419
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/63 (26%), Positives = 27/63 (42%)
Query: 120 SLYAGVLGNPEQSSNGDLNQAVRGTIFSSGPVAQIYDSIPRGVCYNALPEAVGKQLSGDW 179
++Y P S G+ + ++ +G V PR YN LP+ QL ++
Sbjct: 350 AVYPTAPSAPPASPGGEAPPSYEESVHGAGKVEDAEAFAPRYPVYNNLPQQQNSQLPPEY 409
Query: 180 APP 182
APP
Sbjct: 410 APP 412
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 371 LDDWEMEKRIRLDDIPRVCSCKSVIGNTPSSVYAMIRGDSRNRNDRYDDVVK 422
LD W + RLD+I R+C+ + TP Y+ +R R D YD V++
Sbjct: 1420 LDSWRDRIKERLDEIDRLCT-EEGDSLTPEQ-YSALREMRRQLADEYDTVLR 1469
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 371 LDDWEMEKRIRLDDIPRVCSCKSVIGNTPSSVYAMIRGDSRNRNDRYDDVVK 422
LD W + RLD+I R+C+ + TP Y+ +R R D YD V++
Sbjct: 1420 LDSWRDRIKERLDEIDRLCT-EEGDSLTPEQ-YSALREMRRQLADEYDTVLR 1469
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 371 LDDWEMEKRIRLDDIPRVCSCKSVIGNTPSSVYAMIRGDSRNRNDRYDDVVK 422
LD W + RLD+I R+C+ + TP Y+ +R R D YD V++
Sbjct: 1420 LDSWRDRIKERLDEIDRLCT-EEGDSLTPEQ-YSALREMRRQLADEYDTVLR 1469
>Z92788-8|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 371 LDDWEMEKRIRLDDIPRVCSCKSVIGNTPSSVYAMIRGDSRNRNDRYDDVVK 422
LD W + RLD+I R+C+ + TP Y+ +R R D YD V++
Sbjct: 1420 LDSWRDRIKERLDEIDRLCT-EEGDSLTPEQ-YSALREMRRQLADEYDTVLR 1469
>Z92788-7|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 371 LDDWEMEKRIRLDDIPRVCSCKSVIGNTPSSVYAMIRGDSRNRNDRYDDVVK 422
LD W + RLD+I R+C+ + TP Y+ +R R D YD V++
Sbjct: 1420 LDSWRDRIKERLDEIDRLCT-EEGDSLTPEQ-YSALREMRRQLADEYDTVLR 1469
>Z92788-5|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 371 LDDWEMEKRIRLDDIPRVCSCKSVIGNTPSSVYAMIRGDSRNRNDRYDDVVK 422
LD W + RLD+I R+C+ + TP Y+ +R R D YD V++
Sbjct: 1420 LDSWRDRIKERLDEIDRLCT-EEGDSLTPEQ-YSALREMRRQLADEYDTVLR 1469
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 371 LDDWEMEKRIRLDDIPRVCSCKSVIGNTPSSVYAMIRGDSRNRNDRYDDVVK 422
LD W + RLD+I R+C+ + TP Y+ +R R D YD V++
Sbjct: 1420 LDSWRDRIKERLDEIDRLCT-EEGDSLTPEQ-YSALREMRRQLADEYDTVLR 1469
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 371 LDDWEMEKRIRLDDIPRVCSCKSVIGNTPSSVYAMIRGDSRNRNDRYDDVVK 422
LD W + RLD+I R+C+ + TP Y+ +R R D YD V++
Sbjct: 1420 LDSWRDRIKERLDEIDRLCT-EEGDSLTPEQ-YSALREMRRQLADEYDTVLR 1469
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 371 LDDWEMEKRIRLDDIPRVCSCKSVIGNTPSSVYAMIRGDSRNRNDRYDDVVK 422
LD W + RLD+I R+C+ + TP Y+ +R R D YD V++
Sbjct: 1420 LDSWRDRIKERLDEIDRLCT-EEGDSLTPEQ-YSALREMRRQLADEYDTVLR 1469
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 371 LDDWEMEKRIRLDDIPRVCSCKSVIGNTPSSVYAMIRGDSRNRNDRYDDVVK 422
LD W + RLD+I R+C+ + TP Y+ +R R D YD V++
Sbjct: 1420 LDSWRDRIKERLDEIDRLCT-EEGDSLTPEQ-YSALREMRRQLADEYDTVLR 1469
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 371 LDDWEMEKRIRLDDIPRVCSCKSVIGNTPSSVYAMIRGDSRNRNDRYDDVVK 422
LD W + RLD+I R+C+ + TP Y+ +R R D YD V++
Sbjct: 1420 LDSWRDRIKERLDEIDRLCT-EEGDSLTPEQ-YSALREMRRQLADEYDTVLR 1469
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 30.7 bits (66), Expect = 3.6
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 467 EQNDVKMDEPRPEAVNQGASTSK--DDPQPSTSNKTDQKNGEKTENKEPKQN 516
++ D K DE + E S K D+ + K D+K+ +K++NK+ K +
Sbjct: 112 DKKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKKEDKKDDKKSDNKDDKDD 163
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 30.7 bits (66), Expect = 3.6
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 474 DEPR-PEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQN 516
+EP+ PE V + ST +D + ++ D+K ++T +++ K+N
Sbjct: 4 EEPKSPEKVERRRSTQEDSEKDKKRSRDDRKTEKRTHDRDRKRN 47
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 30.3 bits (65), Expect = 4.7
Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 467 EQNDVKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQNI 517
+ +D + ++ + +S+S+ +P+P K +KN E++ K+ K+NI
Sbjct: 708 DSSDSSDSDDSSDSSSDSSSSSESEPEPPKKKK--KKNSEESSKKKEKENI 756
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 30.3 bits (65), Expect = 4.7
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 467 EQNDVKMDE--PRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQNI 517
E+ VK+++ P PE STS++ P+ + + K + +G TE KE K+ +
Sbjct: 599 EKESVKVEDSTPEPEPETPVNSTSEESPKTNETEK-NASSGNATEVKEKKKEL 650
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 30.3 bits (65), Expect = 4.7
Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 467 EQNDVKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQNI 517
+ +D + ++ + +S+S+ +P+P K +KN E++ K+ K+NI
Sbjct: 708 DSSDSSDSDDSSDSSSDSSSSSESEPEPPKKKK--KKNSEESSKKKEKENI 756
>AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-related
protein 2A protein.
Length = 826
Score = 30.3 bits (65), Expect = 4.7
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 371 LDDWEMEKRIRLDDIPRVCSCKSVIGNTPSSVYAMIRGDSRNRNDRYDDVVK 422
LD W + RLD+I R+C+ + TP Y+ +R R D YD V++
Sbjct: 139 LDTWRDRIKERLDEIDRLCT-EEGDSLTPEQ-YSALREMRRQLADEYDTVLR 188
>AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 related
protein 1, isoform c protein.
Length = 756
Score = 30.3 bits (65), Expect = 4.7
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 474 DEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQN 516
DE P V QG ++S ++P S + K +K E KE K+N
Sbjct: 139 DEECPAPVGQGRTSSTEEPSASDAPAATAK--DKKEEKEAKEN 179
>AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform d protein.
Length = 870
Score = 30.3 bits (65), Expect = 4.7
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 474 DEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQN 516
DE P V QG ++S ++P S + K +K E KE K+N
Sbjct: 139 DEECPAPVGQGRTSSTEEPSASDAPAATAK--DKKEEKEAKEN 179
>AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform b protein.
Length = 870
Score = 30.3 bits (65), Expect = 4.7
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 474 DEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQN 516
DE P V QG ++S ++P S + K +K E KE K+N
Sbjct: 139 DEECPAPVGQGRTSSTEEPSASDAPAATAK--DKKEEKEAKEN 179
>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
protein 1, isoform a protein.
Length = 1022
Score = 30.3 bits (65), Expect = 4.7
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 474 DEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQN 516
DE P V QG ++S ++P S + K +K E KE K+N
Sbjct: 139 DEECPAPVGQGRTSSTEEPSASDAPAATAK--DKKEEKEAKEN 179
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 30.3 bits (65), Expect = 4.7
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 21 LSDDVLLCILKYCTPRDLKALGYTCPRLGALVVDRTLWESVDARESPSG 69
L D VL I +Y +P+ + +G C R + LW+ V R + G
Sbjct: 52 LPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLWKFVSFRPNYGG 100
>AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical
protein T28B4.1b protein.
Length = 518
Score = 30.3 bits (65), Expect = 4.7
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 21 LSDDVLLCILKYCTPRDLKALGYTCPRLGALVVDRTLWESVDARESPSG 69
L D VL I +Y +P+ + +G C R + LW+ V R + G
Sbjct: 35 LPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLWKFVSFRPNYGG 83
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 30.3 bits (65), Expect = 4.7
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 21 LSDDVLLCILKYCTPRDLKALGYTCPRLGALVVDRTLWESVDARESPSG 69
L D VL I +Y +P+ + +G C R + LW+ V R + G
Sbjct: 69 LPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLWKFVSFRPNYGG 117
>AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase protein
2 protein.
Length = 826
Score = 30.3 bits (65), Expect = 4.7
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 371 LDDWEMEKRIRLDDIPRVCSCKSVIGNTPSSVYAMIRGDSRNRNDRYDDVVK 422
LD W + RLD+I R+C+ + TP Y+ +R R D YD V++
Sbjct: 139 LDTWRDRIKERLDEIDRLCT-EEGDSLTPEQ-YSALREMRRQLADEYDTVLR 188
>Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 29.9 bits (64), Expect = 6.2
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 474 DEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQNIL 518
+E E + G + S + PS+S+ + + + + PK+NI+
Sbjct: 25 EEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNII 69
>Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 29.9 bits (64), Expect = 6.2
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 474 DEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQNIL 518
+E E + G + S + PS+S+ + + + + PK+NI+
Sbjct: 25 EEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNII 69
>AL021446-1|CAA16265.1| 398|Caenorhabditis elegans Hypothetical
protein F14F4.1 protein.
Length = 398
Score = 29.9 bits (64), Expect = 6.2
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 389 CSCKSVIGNTPSSVYAMIRGDSRNRNDRYDDVVKQDLIED 428
C CK+V ++ SV AM DS+ RN +Y +D IE+
Sbjct: 210 CVCKAVRLSSTKSVRAM---DSQKRNGKYSSGATEDYIEE 246
>AC024831-7|AAY86310.1| 711|Caenorhabditis elegans Hypothetical
protein Y55F3C.9 protein.
Length = 711
Score = 29.9 bits (64), Expect = 6.2
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 193 LTQNLLTSLEQQCPNLTTLALDYCNIDCSMRAICHFPRRLKVLSLRGSKCYNQPLDKSFL 252
LT+N +T L + PNL+ L + NI ++ I + L+VLS+R +N D L
Sbjct: 321 LTENEMTLLIKSFPNLSCLDISDTNIK-NLNGISNL-THLQVLSMRNLH-FNTWFDMMDL 377
Query: 253 FKIQDYLKELEELDVS 268
F LK L LDVS
Sbjct: 378 FN----LKNLTFLDVS 389
>Z93385-5|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 468 QNDVKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQ 515
+ DV ++ +P+ ++ ++D P+T ++ +QK EK K+ K+
Sbjct: 122 EGDVSEEDVKPQ-IHSDDELEEEDEAPTTDDEEEQKRKEKERRKKEKR 168
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 468 QNDVKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQ 515
+ DV ++ +P+ ++ ++D P+T ++ +QK EK K+ K+
Sbjct: 122 EGDVSEEDVKPQ-IHSDDELEEEDEAPTTDDEEEQKRKEKERRKKEKR 168
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 29.5 bits (63), Expect = 8.2
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 467 EQNDVKMDEPRPEAVNQGASTSKD---DPQPSTSNKTDQKNGEKTENKE 512
E+ + K D+ + + + A+ S+D D + + K+D+K EK+E K+
Sbjct: 264 EKKEEKKDDKKEDDKEKSATKSEDKKSDEKKTEEKKSDEKKNEKSEEKK 312
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 29.5 bits (63), Expect = 8.2
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 466 GEQNDVKMDEPRPEAVNQGASTS---KDDPQPSTSNKTDQKNGEKTENKEPKQN 516
GE++D +++ EA + G + + D + ++ N NGE+++N+E N
Sbjct: 159 GEESDNEIESDNGEASDNGEESDNGEESDNEEASDNGEASDNGEESDNEEASDN 212
>AF022980-2|AAG24188.3| 343|Caenorhabditis elegans Hypothetical
protein T03D3.5 protein.
Length = 343
Score = 29.5 bits (63), Expect = 8.2
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 12/91 (13%)
Query: 464 GGGEQNDVKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQNILYVNVG 523
GG ++ D D P A+N T +DP P S + Q + K +L +N G
Sbjct: 236 GGSKEKD---DVPASPALNNNIETKSEDPSPENSKISTQM------FTDWKYQLLPINEG 286
Query: 524 RRLHAMYRLAIPVYKVGESGDSQPAAPSRRL 554
+ +RL +P K S + A P R++
Sbjct: 287 SAI-KQFRLVVP--KNFPSPSNSEAKPPRKV 314
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.134 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,342,644
Number of Sequences: 27539
Number of extensions: 756872
Number of successful extensions: 2411
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 2366
Number of HSP's gapped (non-prelim): 72
length of query: 684
length of database: 12,573,161
effective HSP length: 86
effective length of query: 598
effective length of database: 10,204,807
effective search space: 6102474586
effective search space used: 6102474586
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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