GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001813-TA|BGIBMGA001813-PA|IPR002937|Amine oxidase
         (249 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   2.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.1  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/73 (19%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 157 DTGYREAMSPRQMPLLDKMPLLDKMPLLDKMPLLDKMPLLDEMPLLYKMPLLDKMPLLYK 216
           +T Y +  +  Q  + D+  + ++  + +   L+  +P    M ++       +MPL+  
Sbjct: 96  ETQYAKIRTENQKKIFDESVIFERKVMKNFAILI--IPTCVAMFIVPYFQDRREMPLIVW 153

Query: 217 MPLIYKMPLIYKM 229
            P  YK P+++ +
Sbjct: 154 FPFDYKQPVVFDL 166



 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 216 KMPLIYKMPLIYKMPLLYKM 235
           +MPLI   P  YK P+++ +
Sbjct: 147 EMPLIVWFPFDYKQPVVFDL 166



 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 222 KMPLIYKMPLLYKMPLLYKM 241
           +MPLI   P  YK P+++ +
Sbjct: 147 EMPLIVWFPFDYKQPVVFDL 166


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/11 (81%), Positives = 9/11 (81%)

Query: 234 KMPLLYKMPLP 244
           KMPLL K PLP
Sbjct: 44  KMPLLPKTPLP 54


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.141    0.438 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,682
Number of Sequences: 317
Number of extensions: 2921
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 4
length of query: 249
length of database: 114,650
effective HSP length: 55
effective length of query: 194
effective length of database: 97,215
effective search space: 18859710
effective search space used: 18859710
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)