Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001813-TA|BGIBMGA001813-PA|IPR002937|Amine oxidase
(249 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0731 + 20161962-20163628,20163721-20163862,20164181-201644... 60 1e-09
02_05_0795 - 31792231-31794780 60 2e-09
04_04_1203 - 31703512-31703832,31703922-31704351,31704454-317045... 56 2e-08
08_01_0295 - 2379181-2379336,2379660-2380324,2381346-2382882 54 1e-07
01_06_0454 - 29506637-29508175 52 3e-07
04_04_0783 - 28040828-28041615,28041942-28043589 50 1e-06
04_04_1544 - 34273909-34274220,34274340-34274769,34274933-342750... 49 4e-06
09_03_0075 - 12112685-12112696,12112778-12112835,12112916-121129... 41 0.001
09_03_0073 - 12092566-12092645,12092788-12092869,12092979-120932... 40 0.001
04_04_1545 - 34278266-34278586,34278685-34279114,34279225-342793... 39 0.003
03_02_0001 + 4844009-4844046,4845155-4845410,4845560-4845704,484... 38 0.010
01_01_0796 + 6190931-6192745 34 0.12
04_04_1189 + 31586991-31587291,31587358-31587397,31587449-315875... 33 0.29
04_04_1200 + 31690611-31690914,31690993-31691293,31691391-31696251 31 0.88
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98... 29 2.7
07_01_0594 + 4428440-4429837 29 3.6
05_01_0010 - 66348-66629 29 4.7
04_03_0399 - 15414405-15416717,15416739-15417524,15417776-15417784 29 4.7
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 29 4.7
06_03_0382 - 20142830-20144329 28 6.2
06_02_0364 + 15178583-15178881,15179652-15179723,15179853-151799... 28 6.2
06_01_0504 + 3632108-3632281,3633532-3633699,3633797-3633883,363... 28 6.2
03_03_0280 - 16166962-16167393,16167646-16167770,16168305-161686... 28 8.2
>10_08_0731 + 20161962-20163628,20163721-20163862,20164181-20164490,
20164566-20166466,20166557-20166650,20166953-20167440,
20167919-20168599,20168870-20168944,20170148-20170210,
20170588-20170633,20171373-20171420,20171484-20171557
Length = 1862
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 9/100 (9%)
Query: 65 EDVVKRKIMEILRKFLGKHFTIPEPVAMIRSDWHSNPFTRGSYTYDNVDAPKYPDARIHL 124
+D VK I+ +LRK L K ++P+PVA + ++W +PF+RG+Y+Y V A D I L
Sbjct: 1137 DDHVKNAIV-VLRK-LFKDASVPDPVASVVTNWGLDPFSRGAYSYVAVGA-SGRDYDI-L 1192
Query: 125 GEPLLDSAGKPRVLFAGEATDPTHFSTVHGATDTGYREAM 164
G P+ D + FAGEAT H TV GA +G REA+
Sbjct: 1193 GRPVSDC-----LFFAGEATCKEHPDTVGGAILSGLREAV 1227
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 17 KIKAINSTSIGVVDKIVLSFERAWWPKGLSFFGFLWDENCLK 58
K+ +I+ G+++KIVL F +W + +FG ++ L+
Sbjct: 1060 KLSSIDRLGFGLLNKIVLEFPEVFWDDNVDYFGATAEQTDLR 1101
>02_05_0795 - 31792231-31794780
Length = 849
Score = 60.1 bits (139), Expect = 2e-09
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 54 ENCLKRVEKLPEDVVKRKIMEILRK-FLGKHFTIPEPVAMIRSDWHSNPFTRGSYTYDNV 112
E+ ++ + P + V+ K++E LRK F K +P+P+ I + W ++ FT GSY+Y +
Sbjct: 607 ESAIEFEKTSPAENVE-KVLETLRKIFSPKGIEVPKPLQAICTRWGTDKFTYGSYSYVAI 665
Query: 113 DAPKYPDARIHLGEPLLDSAGKPRVLFAGEATDPTHFSTVHGATDTGYREA 163
+ D L E + D RV FAGEAT+ + +T+HGA +GYREA
Sbjct: 666 GSSG--DDYDILAESVCD-----RVFFAGEATNRRYPATMHGALLSGYREA 709
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 16 KKIKAINSTSIGVVDKIVLSFERAWWPKGLSFFGFLWDEN 55
+K +AI G+++K+VL F +W + FG L +++
Sbjct: 540 QKREAIERLGFGLLNKVVLLFPYDFWDGRIDTFGHLTEDS 579
>04_04_1203 -
31703512-31703832,31703922-31704351,31704454-31704551,
31704661-31704763,31704849-31704934,31705022-31705109,
31705194-31705358,31705412-31705500,31705622-31705734,
31707646-31707658
Length = 501
Score = 56.4 bits (130), Expect = 2e-08
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 38/210 (18%)
Query: 17 KIKAINSTSIGVVDKIVLSFERAWWPK------------GLSFF------------GFLW 52
K +AI S+GV +KI+L F +WP G S+F ++
Sbjct: 302 KEEAIRELSVGVENKIILHFSEVFWPNVEFLGVVSSTTYGCSYFLNLHKATGHPVLVYMP 361
Query: 53 DENCLKRVEKLPEDVVKRKIMEILRKFLGKHFTIPEPVAMIRSDWHSNPFTRGSYTYDNV 112
+EKL ++ + L+K L EP+ + S W S+ T GSYT+D V
Sbjct: 362 AGRLACDIEKLSDEAAAQFAFSQLKKILPN---AAEPIHYLVSHWGSDENTLGSYTFDGV 418
Query: 113 DAPKYPDARIHLGEPLLDSAGKPRVLFAGEATDPTHFSTVHGATDTGYREAMSPRQMPLL 172
P+ D L P+ + FAGEAT + TVHGA TG A R M +L
Sbjct: 419 GKPR--DLYEKLRIPV------DNLFFAGEATSVQYTGTVHGAFSTGLMAAEECR-MRVL 469
Query: 173 DKMPLLDKMPLLDKMPLLDKMPLLDEMPLL 202
++ LD + + P + + +PLL
Sbjct: 470 ERFRELDMLEMCH--PAMGEQTATVSVPLL 497
>08_01_0295 - 2379181-2379336,2379660-2380324,2381346-2382882
Length = 785
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 61 EKLPEDVVKRKIMEILRKFLG-KHFTIPEPVAMIRSDWHSNPFTRGSYTYDNVDAPKYPD 119
EK+ V +++ IL+ G K T+P+P+ + W S+P GSY++ V + D
Sbjct: 496 EKVDPAVALHRVLGILKGIYGPKGVTVPDPIQSCCTRWGSDPLCSGSYSHIRVGSSG-TD 554
Query: 120 ARIHLGEPLLDSAGKPRVLFAGEATDPTHFSTVHGATDTGYREA 163
I L E + D R+ FAGEAT+ + +T+HGA +G REA
Sbjct: 555 YDI-LAESVND-----RLFFAGEATNRAYPATMHGALLSGLREA 592
>01_06_0454 - 29506637-29508175
Length = 512
Score = 52.4 bits (120), Expect = 3e-07
Identities = 46/114 (40%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 60 VEKLPEDVVKRKIMEILRKFLGKHFTIPE-PVAMI-RSDWHSNPFTRGSYTYDNVDAPKY 117
+E LP+D V R L FL P V I RS W ++P GSY+Y V +
Sbjct: 389 LESLPDDDVIRGAHATLDSFLP---AAPRWRVRRIKRSGWATDPLFLGSYSYVAVGSSG- 444
Query: 118 PDARIHLGEPLL---DSAG-----KPRVLFAGEATDPTHFSTVHGATDTGYREA 163
D + EPL D+A PR+LFAGEAT TH+ST H A +G REA
Sbjct: 445 -DDLDRMAEPLPRGPDAAADERPPSPRLLFAGEATHRTHYSTTHAAYLSGVREA 497
>04_04_0783 - 28040828-28041615,28041942-28043589
Length = 811
Score = 50.4 bits (115), Expect = 1e-06
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 64 PEDVVKRKIMEILRK-FLGKHFTIPEPVAMIRSDWHSNPFTRGSYTYDNVDAPKYPDARI 122
P D V +++ILR + + +P+P+ + + W ++ F+ GSY++ V A D I
Sbjct: 537 PTDAVS-SVLKILRGIYEPQGIEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASG-DDYDI 594
Query: 123 HLGEPLLDSAGKPRVLFAGEATDPTHFSTVHGATDTGYREA 163
L +S G R+ FAGEAT + +T+HGA +G REA
Sbjct: 595 -----LAESVGDGRLFFAGEATTRRYPATMHGAFISGLREA 630
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 16 KKIKAINSTSIGVVDKIVLSFERAWWPKGLSFFGFLWDE 54
+K+ +I G+++K+ + F +W L FG L ++
Sbjct: 460 RKLDSIKRLGFGLLNKVAMLFPHVFWSTDLDTFGHLTED 498
>04_04_1544 -
34273909-34274220,34274340-34274769,34274933-34275030,
34275178-34275280,34275386-34275471,34275590-34275677,
34275773-34275886,34275975-34276179,34276530-34276557
Length = 487
Score = 48.8 bits (111), Expect = 4e-06
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 58 KRVEKLPEDVVKRKIMEILRKFLGKHFTIPEPVAMIRSDWHSNPFTRGSYTYDNVDAPKY 117
+ VEKL + +M L+K L EP + S W S+P + GSY+ D V P
Sbjct: 356 QEVEKLSDKEAVDLVMSHLKKMLPD---ATEPTKYLVSRWGSDPNSLGSYSCDLVGKPAD 412
Query: 118 PDARIHLGEPLLDSAGKPRVLFAGEATDPTHFSTVHGATDTGYREAMSPRQMPLLDK-MP 176
AR +A + FAGEA H +VHGA +G A R+ L+ K +P
Sbjct: 413 VSARF--------AAPVENLYFAGEAASADHSGSVHGAYSSGIAAADECRKRILMQKGIP 464
Query: 177 LLDKMPLLDKM 187
L ++ ++M
Sbjct: 465 DLVQVKAYEEM 475
>09_03_0075 -
12112685-12112696,12112778-12112835,12112916-12112973,
12113138-12113219,12113373-12113630,12113708-12113857,
12113975-12114118,12114265-12114528
Length = 341
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 58 KRVEKLPEDVVKRKIMEILRKFLGKHFTIPEPVAMIRSDWHSNPFTRGSYTYDNVDAPKY 117
+R+E+ P+ K +IME++R +P+ ++ W S+ F +GS++ + +Y
Sbjct: 208 RRIEQQPDSQTKAEIMEVVRSMFPDE-DVPDATDILVPRWWSDRFFQGSFSNWPIGVSRY 266
Query: 118 PDARIHLGEPLLDSAGKPRVLFAGEATDPTHFSTVHGATDTGYREA 163
++ A RV F GE T + VHGA G A
Sbjct: 267 EHDQLR--------APVGRVYFTGEHTSERYNGYVHGAYLAGIDSA 304
>09_03_0073 -
12092566-12092645,12092788-12092869,12092979-12093236,
12093314-12093463,12093581-12093724,12093744-12094077,
12094639-12094785,12097446-12097695,12100511-12100616
Length = 516
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 58 KRVEKLPEDVVKRKIMEILRKFLGKHFTIPEPVAMIRSDWHSNPFTRGSYTYDNVDAPKY 117
+R+E+ P+ K +IME++R +P+ ++ W S+ F RGS++ + +Y
Sbjct: 399 RRIEQQPDSQTKAEIMEVVRCMFPDE-DVPDATDILVPRWWSDRFFRGSFSNWPIGVSRY 457
Query: 118 PDARIHLGEPLLDSAGKPRVLFAGEATDPTHFSTVHGATDTGYREA 163
++ A RV F GE T + VHGA G A
Sbjct: 458 EYDQLR--------APVGRVYFTGEHTSERYNGYVHGAYLAGIDSA 495
>04_04_1545 -
34278266-34278586,34278685-34279114,34279225-34279322,
34279415-34279517,34279609-34279694,34279778-34279865,
34279950-34280063,34280147-34280235,34280369-34280484,
34280906-34280951
Length = 496
Score = 39.1 bits (87), Expect = 0.003
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 61 EKLPEDVVKRKIMEILRKFLGKHFTIPEPVAMIRSDWHSNPFTRGSYTYDNVDAPKYPDA 120
EKL ++ +M L+K L EPV + S W ++P + GSY+ D V P
Sbjct: 365 EKLSDEESVNFVMSQLKKMLPG---ATEPVQYLVSRWGTDPNSLGSYSCDLVGKP----- 416
Query: 121 RIHLGEPLLDSAGKPRVLFAGEATDPTHFSTVHGATDTG 159
L E G + FAGEA H +VHGA +G
Sbjct: 417 -ADLYERFCAPVG--NLFFAGEAACIDHSGSVHGAYSSG 452
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 17 KIKAINSTSIGVVDKIVLSFERAWWP 42
K+ +I+ IG+ +KI L F +WP
Sbjct: 297 KLSSISDLGIGIENKIALRFNSVFWP 322
>03_02_0001 +
4844009-4844046,4845155-4845410,4845560-4845704,
4845747-4845931,4847011-4847268,4847395-4847476,
4847562-4847641
Length = 347
Score = 37.5 bits (83), Expect = 0.010
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 37/175 (21%)
Query: 17 KIKAINSTSIGVVDKIVLSFERAWWPKG--LSFF-------GF--LW--------DENCL 57
KI AI + V KI + F + +WP+G FF G+ +W D N L
Sbjct: 161 KILAIYEFDMAVYTKIFVKFPKRFWPEGEGREFFLYASTRRGYYGIWQEFEKQYPDSNVL 220
Query: 58 ---------KRVEKLPEDVVKRKIMEILRKFLGKHFTIPEPVAMIRSDWHSNPFTRGSYT 108
+R+E+ ++ K +IME+LR +P+ ++ W SN F +G+++
Sbjct: 221 LVTVTDKESRRIEQQSDNQTKAEIMEVLRNMFPDQ-DVPDATDILVPRWWSNRFYKGTFS 279
Query: 109 YDNVDAPKYPDARIHLGEPLLDSAGKPRVLFAGEATDPTHFSTVHGATDTGYREA 163
+ +Y ++ A RV F GE T + VHG G A
Sbjct: 280 NWPIGVNRYEYDQLR--------APIERVYFTGEHTSEYYNGYVHGGYLAGIDSA 326
>01_01_0796 + 6190931-6192745
Length = 604
Score = 33.9 bits (74), Expect = 0.12
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 165 SPRQMPLLD-KMPLLDKMPLLDKMPLL--DKMPLLDEMPLLYKMPLLD-KMPLLYKMPLI 220
+P QMP+ + +PL + PLL + P L D P L +P +MP+ + +PL + P +
Sbjct: 329 APLQMPVAETHLPL--QAPLLQE-PFLFSDHAPTLAPLPSPLQMPVAETHLPLQVQAPFM 385
Query: 221 YKMPLIY--KMPLLYKMPLLYKMPLPDKMPL 249
+ P ++ + P+L P +MP+ MPL
Sbjct: 386 QE-PFLFSDQAPVLAPPPTPLQMPVEAHMPL 415
>04_04_1189 +
31586991-31587291,31587358-31587397,31587449-31587534,
31587535-31588097,31588250-31589913,31589956-31590066,
31590152-31591181,31591234-31591406,31591535-31591814,
31592275-31592331
Length = 1434
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 147 THFSTVHGATDTGYREAMSPRQMPLLDKMPLLDKMPLLD-KMPLLDKMPLLDEMPLLYKM 205
T T+H ++ SP+ +PLL K+ L+ L++ +P L+++ L+ EMP L K+
Sbjct: 828 TSLQTIHLENCREWKILRSPKILPLLRKLKLVKMFNLVELSIPSLEELVLI-EMPKLEKV 886
Query: 206 PLLDKMPLL 214
+ P L
Sbjct: 887 LTIKDCPQL 895
>04_04_1200 + 31690611-31690914,31690993-31691293,31691391-31696251
Length = 1821
Score = 31.1 bits (67), Expect = 0.88
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 143 ATDPTHFSTVHGATDTGYREAMSPRQM-PLLDKMPLLDKMPLLDKMPLLD-KMPLLDEMP 200
AT PT +T + T E +M P L+++P L KM L +++ +P L+E+
Sbjct: 921 ATPPTWLATSLTSLQTLRLECCGQWKMIPSLERLPFLKKMKLESMQKIIEMTVPSLEEL- 979
Query: 201 LLYKMPLLDKMPLLYKMPLIYKMPL--IYKMPLLYKMPL 237
+L MP L++ L + + + K P+L PL
Sbjct: 980 MLIDMPNLERCSCTSMRDLNCSLRVLKVKKCPVLKVFPL 1018
>02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-989673,
990244-990510,990840-992458,992571-993327,993560-995506
Length = 1727
Score = 29.5 bits (63), Expect = 2.7
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 143 ATDPTHF-STVHGATDTGYREAMSPRQMPLLDKMPLLDKMPLLDKMPLLD-KMPLLDEMP 200
AT PT STV R + L+K+PLL K+ L+ L++ +P E
Sbjct: 993 ATSPTWLASTVTSLQGLHLYNCREWRVVRSLEKLPLLQKLKLVRMWNLMEVSIPSYLEEL 1052
Query: 201 LLYKMPLLDKMPLLYKMPLIYKMPLIYKMPLLYKMPLL 238
+L MP L K Y L + + +M L ++ L+
Sbjct: 1053 VLVDMPKLKKCVGTYGQDLTSGLRELMEMGALKELELI 1090
>07_01_0594 + 4428440-4429837
Length = 465
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 23 STSIGVVDKIVLSFERAWWPKGLSFFGFLWDENCLKRVEKLPEDVVKRKI 72
S+S G ++++ ER WW + + F WD+ R + P+D+ R +
Sbjct: 346 SSSAGGGALVLVATERRWWKQKMYMCAFRWDDEL--RFWRRPKDLGGRAV 393
>05_01_0010 - 66348-66629
Length = 93
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 34 LSFERAWWPKGLSFFGFLWDENCLKRVEKLPEDVVKRK 71
L +++ WW +G F LK +EK D V +K
Sbjct: 48 LQYKKLWWEEGKRFVKLRLSTKALKTIEKHGLDAVAKK 85
>04_03_0399 - 15414405-15416717,15416739-15417524,15417776-15417784
Length = 1035
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 190 LDKMP-LLDEMPLLYKMPLLDKMPLLYKMPLIYKMPL 225
LD P L+ +PL +P L+ + +LY LIY PL
Sbjct: 863 LDSCPRLIHVLPLSNNLPSLETIQILYCTSLIYVFPL 899
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 196 LDEMP-LLYKMPLLDKMPLLYKMPLIYKMPLIYKMPL 231
LD P L++ +PL + +P L + ++Y LIY PL
Sbjct: 863 LDSCPRLIHVLPLSNNLPSLETIQILYCTSLIYVFPL 899
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 190 LDKMP-LLDEMPLLYKMPLLDKMPLLYKMPLIYKMPL 225
LD P L+ +PL +P L+ + +LY LIY PL
Sbjct: 868 LDSCPRLIHVLPLSNNLPSLETIQILYCTSLIYVFPL 904
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 196 LDEMP-LLYKMPLLDKMPLLYKMPLIYKMPLIYKMPL 231
LD P L++ +PL + +P L + ++Y LIY PL
Sbjct: 868 LDSCPRLIHVLPLSNNLPSLETIQILYCTSLIYVFPL 904
>06_03_0382 - 20142830-20144329
Length = 499
Score = 28.3 bits (60), Expect = 6.2
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 9/125 (7%)
Query: 70 RKIMEILRKFLGKHFTIPEPVAMIRSDWHSNPFTRGSYTYDNVDAPKYPDARIHLGEPLL 129
R + +L+ + TIPE + M W F +Y D+ D + D GEP L
Sbjct: 241 RLVRRLLQPDPDRRITIPEIMEM---RWFKRGFKEVTYYIDSNDRLRSLDGLD--GEPEL 295
Query: 130 DSAGKPRVLFAGEATDPTHFSTVHGATDTGYREAMSPRQMPLLDKMPLLDKMPLLDKMPL 189
+ + + + PT + T G ++S + LD+M +PL +P
Sbjct: 296 YDSDTDTIESSSSSESPTPVA----GTPRGMHTSVSAPALSELDRMEDSASLPLPLPLPP 351
Query: 190 LDKMP 194
+MP
Sbjct: 352 RPRMP 356
>06_02_0364 +
15178583-15178881,15179652-15179723,15179853-15179917,
15180890-15180934,15182493-15183170,15183376-15183410,
15183647-15183736,15183896-15183985,15184164-15184262,
15184938-15185013,15185473-15185588
Length = 554
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 141 GEATDPTHFSTVHGATDTGYREAMSPRQMPLLDK 174
GEA DP F HG +D + + + R L D+
Sbjct: 74 GEAIDPVGFLAKHGISDRAFAQFLRDRYKALKDR 107
>06_01_0504 +
3632108-3632281,3633532-3633699,3633797-3633883,
3634766-3634876,3635114-3635205,3635288-3635393,
3635475-3635561,3637796-3638209
Length = 412
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 1 MVALAGSDAFRITTGKKIKAINSTSIGVVDKIVLSFERAWWPKGLSFFGFLWDENC 56
++A+ G D + + + ST +G +D SF AW P G +F D+ C
Sbjct: 256 LLAVVGDDRDALLVDSRNGKVTSTLVGHLD---YSFASAWHPDGRTFATGNQDKTC 308
>03_03_0280 -
16166962-16167393,16167646-16167770,16168305-16168645,
16171153-16171313
Length = 352
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 152 VHGATDTGYREAMSPRQ-MPLLDKMPLLDKMPLLDKMPLLDKMPLLDEM 199
VHG D RE + + MP+ +++ + +PL +++ D +PL +E+
Sbjct: 223 VHGGEDVEVREEVHGEENMPVREEVCVEGNVPLREEVHAEDNVPLREEV 271
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.323 0.141 0.438
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,719,971
Number of Sequences: 37544
Number of extensions: 356570
Number of successful extensions: 643
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 600
Number of HSP's gapped (non-prelim): 45
length of query: 249
length of database: 14,793,348
effective HSP length: 80
effective length of query: 169
effective length of database: 11,789,828
effective search space: 1992480932
effective search space used: 1992480932
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)
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