Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001812-TA|BGIBMGA001812-PA|IPR002937|Amine oxidase
(245 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_612| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44) 52 3e-07
SB_36698| Best HMM Match : Heme_oxygenase (HMM E-Value=2.5) 46 2e-05
SB_14112| Best HMM Match : Amino_oxidase (HMM E-Value=3.3e-13) 46 2e-05
SB_9370| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_19455| Best HMM Match : Amino_oxidase (HMM E-Value=0.0003) 42 4e-04
SB_3920| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_53565| Best HMM Match : Amino_oxidase (HMM E-Value=9.7e-19) 42 4e-04
SB_47418| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22) 42 6e-04
SB_8406| Best HMM Match : UCR_UQCRX_QCR9 (HMM E-Value=3) 39 0.003
SB_21644| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_52319| Best HMM Match : Rho_N (HMM E-Value=1.8e-07) 38 0.010
SB_38188| Best HMM Match : rve (HMM E-Value=5.7e-31) 37 0.013
SB_7540| Best HMM Match : Transgly_assoc (HMM E-Value=0.46) 37 0.013
SB_50452| Best HMM Match : Nepo_coat_N (HMM E-Value=7.2) 34 0.094
SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_14978| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_24572| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_5266| Best HMM Match : VWA (HMM E-Value=0) 30 2.0
SB_59581| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_39797| Best HMM Match : VWA (HMM E-Value=6e-26) 30 2.0
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 30 2.0
SB_29736| Best HMM Match : RVT_1 (HMM E-Value=0.39) 29 4.7
SB_53791| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_40313| Best HMM Match : Glyco_hydro_38 (HMM E-Value=0) 28 6.2
SB_34493| Best HMM Match : Pyr_redox_dim (HMM E-Value=0) 28 6.2
SB_30233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_7963| Best HMM Match : Pyr_redox_dim (HMM E-Value=2.2e-39) 28 6.2
SB_30272| Best HMM Match : GDI (HMM E-Value=0) 28 8.2
SB_20505| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_693| Best HMM Match : efhand (HMM E-Value=2e-09) 28 8.2
>SB_612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 83.4 bits (197), Expect = 2e-16
Identities = 44/139 (31%), Positives = 81/139 (58%), Gaps = 7/139 (5%)
Query: 107 IQLNKEVVLIEWPTDPEQ----LVTVSCKDGTKYTANNVIVTVSLGVLKERYDKLFTPVL 162
++ N EVV I+W PE+ +V+++C +G +TA +VIVT+ LGVLK R++ +F P L
Sbjct: 220 VRFNHEVVSIKWKPKPEETSSSVVSITCSNGEIFTAEHVIVTLPLGVLKSRHEVIFNPPL 279
Query: 163 PSRKISAIQQISVGVIAKVAMSFPAKWFPDDIVYLGFLWSKQDLDSLSDEDQWMSKMEGP 222
P K AI ++ G I ++ + F ++ ++I +G LW+ +LDS ++ W+ ++
Sbjct: 280 PQIKKDAINRLGYGTINRIYLVFEKAFWSNEIKGMGLLWT--NLDS-NNWPSWVKELYIF 336
Query: 223 SQPMSSNDSVTLWIVGDGA 241
++ + W+ G+ A
Sbjct: 337 YPTHKGSNVLVTWLSGEAA 355
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1 MATTYDTIIVGLGPAGCTAASTLAQAGK-KILALEAQNRIGGRVKTVPFGDGVIELGAEC 59
M++ +++G G AG +AA L + + + LEA +RIGGR+ T + V+ELGA
Sbjct: 1 MSSRPRVVVIGGGIAGLSAALNLQNSKEVDVTILEASSRIGGRIHTSTINNEVVELGAGW 60
Query: 60 WNDVTTQTHY 69
+D T+ Y
Sbjct: 61 IHDSTSNPLY 70
>SB_31903| Best HMM Match : Amino_oxidase (HMM
E-Value=3.36312e-44)
Length = 1021
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 4 TYDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRVKTVPFGDGVIELGA 57
T +I+G G AG AAS L + G + LEA++ IGGRV++V F +G IE GA
Sbjct: 39 TTKVLILGAGVAGIAAASVLHEEGVGFIVLEAKDYIGGRVRSVEFAEGSIETGA 92
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 107 IQLNKEVVLIEWPTDPEQLVTVSCKDGTKYTANNVIVTVSLGVLKERYDKLFTPVLPSRK 166
I+L KEV I + VTV+ +G YTA + I T S GVL F P LP K
Sbjct: 775 IELEKEVESISYSNAG---VTVNLTNGNVYTAEHAICTFSSGVLNNGLVN-FIPRLPKWK 830
Query: 167 ISAIQQISVGVIAKVAMSFPAKWFPD 192
A+ ++ + K+ + F K++ D
Sbjct: 831 QDALSKVPMSFYTKIFLKFQIKFWED 856
>SB_36698| Best HMM Match : Heme_oxygenase (HMM E-Value=2.5)
Length = 240
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 126 VTVSCKDGTKYTANNVIVTVSLGVLKERYDKLFTPVLPSRKISAIQQISVGVIAKVAMSF 185
VT++ G +AN V++TV L +LK+ D +F+P LP K AI+++ +G K+ F
Sbjct: 13 VTLTNNIGETLSANYVVITVPLTILKDG-DIIFSPPLPREKELAIERLHMGTALKIVCRF 71
Query: 186 PAK-WFPDDIVYL--GFL 200
W P +Y+ GF+
Sbjct: 72 GKPFWGPTQFIYVTHGFI 89
>SB_14112| Best HMM Match : Amino_oxidase (HMM E-Value=3.3e-13)
Length = 482
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 126 VTVSCKDGTKYTANNVIVTVSLGVLKERYDKLFTPVLPSRKISAIQQISVGVIAKVAMSF 185
VT++ G +AN V++TV L +LK+ D +F+P LP K AI+++ +G K+ F
Sbjct: 255 VTLTNNIGETLSANYVVITVPLTILKDG-DIIFSPPLPREKELAIERLHMGTALKIVCRF 313
Query: 186 PAK-WFPDDIVYL--GFL 200
W P +Y+ GF+
Sbjct: 314 GKPFWGPTQFIYVTHGFI 331
>SB_9370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 8 IIVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRVKTVPFGDGVIELGA 57
IIVG G AG AA L G + +EA+ R+GGRV T G + +LGA
Sbjct: 254 IIVGSGIAGLMAARQLQSFGIDVTMVEARERVGGRVATFRKGQYIADLGA 303
>SB_19455| Best HMM Match : Amino_oxidase (HMM E-Value=0.0003)
Length = 658
Score = 42.3 bits (95), Expect = 4e-04
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 4 TYDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRV-KTVPF-GDGVIELGAECWN 61
++ +VG G AG AA++L G + LEA + GGRV + +PF G ++LGAE +
Sbjct: 7 SFTVAVVGGGVAGLAAAASLIDKGFDVKLLEAADYFGGRVIQALPFPGFAPVDLGAEFIH 66
Query: 62 DVTTQTHYVDLEGDQHMSWHRNGYSTLFDILLNTYKGGPGYPNL 105
+T D+ Q HR L D L+ Y G YP L
Sbjct: 67 G--DRTILNDIARKQSWKVHR---ENLLDALV--YVDGKSYPCL 103
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 108 QLNKEVVLIEWPTDPEQLVTVSCKDGTKYTANNVIVTVSLGVLKERYDKLFTPVLPSRKI 167
+LN +V + D V + +DG + VI+TV L +LK+ D F+P LP K
Sbjct: 205 KLNWQVKQVILEDDQSSSVILINQDGEPIHVDYVIITVPLSILKDG-DIRFSPPLPFEKQ 263
Query: 168 SAIQQISVGVIAKVAMSFPAKWFPDDIV 195
AI I VG K+ F +++ V
Sbjct: 264 QAIDSIKVGSALKIICRFRTRFWQKTFV 291
>SB_3920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 42.3 bits (95), Expect = 4e-04
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 6 DTIIVGLGPAG-CTAASTL-AQAGKKILALEAQNRIGGRVKTV-----------PFGDGV 52
D ++VG G +G C+A L AQ K++ LEA+ R+GGR+ T GD +
Sbjct: 258 DVVVVGAGTSGLCSAYEILKAQKDCKVVVLEAKGRVGGRLDTKELKTATGTDNWDLGDLM 317
Query: 53 IELGAECWNDVTTQTHYVDLE--GDQHMS--WHRNGYSTLFDILLNTYKGGP-GYPNL-- 105
ELG E ++ V L G + S + Y +L DI + KGG P +
Sbjct: 318 TELGLEKFDQWYEGDKLVHLSSGGIKRYSGAYPSISYFSLLDIHRLSKKGGAFQIPVILA 377
Query: 106 ------EIQLNKEVVLIEWPTDPEQLVTVSCKDGTKYTANNVIVTV 145
+++LN+ V +I+ E + + ++GT YTA I+ +
Sbjct: 378 EKVGMDKVRLNQPVTMIK---QDEDKIHIQTRNGTTYTAKAAIIAI 420
>SB_53565| Best HMM Match : Amino_oxidase (HMM E-Value=9.7e-19)
Length = 438
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 121 DPEQLVTVSCKDGTKYTANNVIVTVSLGVLKERYDKLFTPVLPSRKISAIQQISVGVIAK 180
D + VT+ G +AN V++TV L +LK+ D +F+P LP K AI+++ + K
Sbjct: 202 DQDMQVTLKSNSGEIISANYVVITVPLTILKDG-DIIFSPPLPREKELAIERLHMSTALK 260
Query: 181 VAMSF 185
+ F
Sbjct: 261 IVCRF 265
>SB_47418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 6 DTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGG 41
D +++G G G T AS LA+ GKKIL LE ++ GG
Sbjct: 87 DAVVIGSGIGGMTCASLLAKTGKKILVLEQHDQAGG 122
>SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)
Length = 2269
Score = 41.5 bits (93), Expect = 6e-04
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 9 IVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRV-KTVPF-GDGVIELGAECWNDVTTQ 66
+VG G AG AA++L G + LEA + GGRV + +PF G ++LGAE + +
Sbjct: 1912 VVGGGVAGLAAAASLIDKGFDVKLLEAADYFGGRVMQALPFPGFAPVDLGAEFIHG--DR 1969
Query: 67 THYVDLEGDQHMSWHRNGYSTLFDILLNTYKGGPGYPNL 105
T D+ Q HR L D L+ Y G YP L
Sbjct: 1970 TILNDIARKQSWKVHR---ENLLDALV--YVDGKSYPCL 2003
>SB_8406| Best HMM Match : UCR_UQCRX_QCR9 (HMM E-Value=3)
Length = 342
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 126 VTVSCKDGTKYTANNVIVTVSLGVLKERYDKLFTPVLPSRKISAIQQISVGVIAKVAMSF 185
VTV+ DG Y+ + T S GVL F+P LP K+ +I ++ + K+ + F
Sbjct: 35 VTVTTTDGRTYSGRYSLCTFSTGVLATDMVN-FSPPLPEWKMESIYKVPMRYYTKIFLQF 93
Query: 186 PAKWFPDD 193
P ++ D+
Sbjct: 94 PTDFWDDN 101
>SB_21644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 38.7 bits (86), Expect = 0.004
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 70 VDLEGDQHMSWHRNGYSTLFDILLNTYKGGPGYPNLEIQLNKEVVLIEWPTDPEQLVTVS 129
+D S + G+ +F+ + T+K +I+LN+ V +++ ++ T S
Sbjct: 145 MDARETDFYSTDQRGFYNIFNETVETFKD-------KIKLNETVARVKYNNTGVEVTTSS 197
Query: 130 CKDGTKYTANNVIVTVSLGVLKERYDKLFTPVLPSRKISAIQQISVGVIAKVAMSFPAKW 189
G Y+A+ V+ T S GVL + F P LP K A + + K+ + F K+
Sbjct: 198 ---GDVYSADYVVCTFSTGVLASDMVE-FVPPLPKWKQEAYLSHPMSIYTKIFLKFDHKF 253
Query: 190 FPDD 193
+ D+
Sbjct: 254 WDDN 257
>SB_52319| Best HMM Match : Rho_N (HMM E-Value=1.8e-07)
Length = 1458
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 122 PEQLVTVSCKDGTKYTANNVIVTVS--LGVLKERYDKLFTPVLPSRKISAIQQISVGVIA 179
PE+LV K K T + LGV K + L+TP+L ++ ++ I
Sbjct: 1118 PEELVPEHMKQYQKDTDRKTLKGTKKLLGVTKAKKILLYTPLLKWYLTHGLEVTAIHKII 1177
Query: 180 KVAMSFPAKWFPDDI 194
K P KWFPD++
Sbjct: 1178 KYVSGRPFKWFPDEV 1192
>SB_38188| Best HMM Match : rve (HMM E-Value=5.7e-31)
Length = 836
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 6 DTIIVGLGPAGCTAASTLAQA-GKKILALEAQNRIGGRVKTV 46
D I++G G +G AA L Q G L LEA++R+GGR +T+
Sbjct: 549 DIIVIGGGISGLCAAKLLQQGHGVDTLVLEARDRVGGRTETL 590
>SB_7540| Best HMM Match : Transgly_assoc (HMM E-Value=0.46)
Length = 320
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 3 TTYDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGG 41
+ YD +I+G GP G AA Q G K+ +E + +GG
Sbjct: 256 SNYDVLIIGGGPGGYNAAIRAGQLGLKVACIEGRETLGG 294
>SB_50452| Best HMM Match : Nepo_coat_N (HMM E-Value=7.2)
Length = 113
Score = 34.3 bits (75), Expect = 0.094
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 141 VIVTVSLGVLKERYDKLFTPVLPSRKISAIQQISVGVIAKVAMSF 185
+IVT+ L VLK K F P + + K AI+++ G+I KV M F
Sbjct: 33 IIVTLPLAVLKAGNVK-FNPPISTTKSRAIEKLGAGLIEKVIMKF 76
>SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2324
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 6 DTIIVGLGPAGCTAASTLAQAGK--KILALEAQNRIGGRVKT 45
D II+G G +G AA+ L + + K+L LEA + +GG T
Sbjct: 2108 DVIIIGAGVSGLIAANVLTEQDQYIKVLVLEACDHVGGGTYT 2149
>SB_14978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 5 YDTIIVGLGPAGCTAASTLAQAGK-KILALEAQNRIGGRVKTVPFG 49
YD II G G AGC A+ L G+ ++L LEA + ++P G
Sbjct: 11 YDFIIAGGGTAGCILANRLTADGRHRVLMLEAGHEARSMWISIPAG 56
>SB_24572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 88 LFDILLNTYKGGPGYPNLEIQLNKEVVLIEWPTDPEQLVTVSCKD 132
L ++L N+ K GY + I + +E PT+P + +V C D
Sbjct: 292 LGNVLWNSGKYKRGYTQIRIPRHNNHAWVELPTEPPAIASVHCLD 336
>SB_5266| Best HMM Match : VWA (HMM E-Value=0)
Length = 797
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 123 EQLVTVSCKDGTKYTANNVIVTVSLGVLKERYDKLFTPVLPSRKISAIQQISVGVIAKVA 182
E+L TV+ G ++ NV++ ++ G + ++ ++ V+P ++ I+VGV +V
Sbjct: 57 ERLFTVA--GGNRFDKPNVLIVITDGKIHPNFEDNYSKVIPPLIAKGVRIIAVGVGGQVK 114
Query: 183 MS 184
S
Sbjct: 115 KS 116
>SB_59581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 361
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 2 ATTYDTIIVGLGPAGCTAASTL-AQAGKKILALEA 35
++ +D +I G G AGC A+ L A K+L LEA
Sbjct: 161 SSEHDYVICGAGSAGCVLANRLSADPDSKVLLLEA 195
>SB_39797| Best HMM Match : VWA (HMM E-Value=6e-26)
Length = 317
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 123 EQLVTVSCKDGTKYTANNVIVTVSLGVLKERYDKLFTPVLPSRKISAIQQISVGVIAKVA 182
E+L TV+ G ++ NV++ ++ G + ++ ++ V+P ++ I+VGV +V
Sbjct: 221 ERLFTVA--GGNRFDKPNVLIVITDGKIHPNFEDNYSKVIPPLIAKGVRIIAVGVGGQVK 278
Query: 183 MS 184
S
Sbjct: 279 KS 280
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 3 TTYDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRVKTVPFGDGVIE 54
T YD I++G G A+ L++ G K+L L+ + + + F DG+++
Sbjct: 6 TEYDAIVLGTGLPEAVVAAALSRIGLKVLHLDRNDYYSSQWASFTF-DGLLK 56
>SB_29736| Best HMM Match : RVT_1 (HMM E-Value=0.39)
Length = 412
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 130 CKDGTKYTANNVIVTVSLGVLKERYDKLFTPVLPSRKISA-IQQISVGVIA------KVA 182
C+D + ++N++I VL +Y T +P R SA + + V I ++
Sbjct: 191 CRDRQRCSSNDIIPVNPSKVLLVKYADDITLSIPQRHNSADLSSVEVQNIKNWSKENRMT 250
Query: 183 MSFPAKWFPDDIVYLGFLWSK 203
++F W +VY G LW++
Sbjct: 251 LNFSKIWEMASLVYRGGLWTQ 271
>SB_53791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1186
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 9 IVGLGPAGCTAA---STLAQAGKKILALEAQNRIGGRVKTVPFGDGVIELG 56
I+G G G +A L + +I EA NR+GGR+ TV E G
Sbjct: 260 IIGAGIGGSASAFFTRELLGSSAEIDVYEASNRVGGRLDTVEVAGQRFEAG 310
>SB_40313| Best HMM Match : Glyco_hydro_38 (HMM E-Value=0)
Length = 887
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/30 (26%), Positives = 21/30 (70%)
Query: 123 EQLVTVSCKDGTKYTANNVIVTVSLGVLKE 152
E+ + ++C+ G++Y +NN+++T+ + E
Sbjct: 272 EEFIKLACEQGSQYKSNNIMMTMGSDFMYE 301
>SB_34493| Best HMM Match : Pyr_redox_dim (HMM E-Value=0)
Length = 394
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 5 YDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGG 41
YD +++G G G +A A+ G K + +E R+GG
Sbjct: 51 YDYVVIGGGSGGIASARRAAEFGVKAVVIE-HARLGG 86
>SB_30233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Query: 5 YDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRVKTVPFGDGV-------IELGA 57
+D ++G G +G A L I+ E + IGG + G GV +
Sbjct: 11 FDVAVIGAGISGLATAKCLLDDKFSIIVYEQSDHIGGLWQFQEDGYGVMRFTHINVSKHN 70
Query: 58 ECWNDVTTQTHYVDLEGDQHMSWHRNGYSTLFDIL 92
C++D D HM + + Y+ F++L
Sbjct: 71 YCFSDYPFPDETPDFPHHLHMMQYVHNYAKHFNLL 105
>SB_7963| Best HMM Match : Pyr_redox_dim (HMM E-Value=2.2e-39)
Length = 387
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 6 DTIIVGLGPAGCTAASTLAQAGKKI 30
D +++G GP G AA AQ G K+
Sbjct: 36 DLVVIGSGPGGYVAAIKAAQLGMKV 60
>SB_30272| Best HMM Match : GDI (HMM E-Value=0)
Length = 1199
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 1 MATTYDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGG 41
M YD +++G G C + L+ KK+L ++ GG
Sbjct: 1 MDAEYDYVVLGTGLKECVLSGLLSLNKKKVLHMDRNKYYGG 41
>SB_20505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 50 DGVIELGAECWNDVTTQTHYVDLEGD 75
DG+ G CW D T ++++++GD
Sbjct: 14 DGLPVSGLHCWLDSTVALYWINIQGD 39
>SB_693| Best HMM Match : efhand (HMM E-Value=2e-09)
Length = 500
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 210 SDEDQWMSKMEGPSQPMSSND 230
SDE++W + +EG QP S+ D
Sbjct: 56 SDEEEWDTDLEGDEQPKSTYD 76
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.134 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,485,466
Number of Sequences: 59808
Number of extensions: 348625
Number of successful extensions: 710
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 683
Number of HSP's gapped (non-prelim): 36
length of query: 245
length of database: 16,821,457
effective HSP length: 80
effective length of query: 165
effective length of database: 12,036,817
effective search space: 1986074805
effective search space used: 1986074805
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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