GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001812-TA|BGIBMGA001812-PA|IPR002937|Amine oxidase
         (245 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    31   0.006
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.6  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.6  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.7  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 31.5 bits (68), Expect = 0.006
 Identities = 16/56 (28%), Positives = 28/56 (50%)

Query: 60  WNDVTTQTHYVDLEGDQHMSWHRNGYSTLFDILLNTYKGGPGYPNLEIQLNKEVVL 115
           WN +++ +H   L   + +SW    Y+ L  I   T+KG P   +L +  N ++ L
Sbjct: 378 WNSISSLSHGGQLARFKCLSWLDLSYNRLGQIDAGTFKGIPRLASLNLGHNSQLTL 433


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/17 (35%), Positives = 13/17 (76%)

Query: 107  IQLNKEVVLIEWPTDPE 123
            + L K+++ ++WP DP+
Sbjct: 1243 LTLKKDLLHLDWPFDPK 1259


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/17 (35%), Positives = 13/17 (76%)

Query: 107  IQLNKEVVLIEWPTDPE 123
            + L K+++ ++WP DP+
Sbjct: 1243 LTLKKDLLHLDWPFDPK 1259


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)

Query: 107  IQLNKEVVLIEWP 119
            +QLNK+ + ++WP
Sbjct: 1286 LQLNKDQIHVKWP 1298


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)

Query: 107  IQLNKEVVLIEWP 119
            +QLNK+ + ++WP
Sbjct: 1286 LQLNKDQIHVKWP 1298


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short
          gastrulation protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 22 TLAQAGKKILALEAQNRIGGRVKTVPFGDGVIELGAE 58
          TLA A  K   L+   R   +     FG  V ELG++
Sbjct: 12 TLATARNKAPLLDDGTRTRNKAAECVFGKQVRELGSQ 48


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/24 (29%), Positives = 13/24 (54%)

Query: 11  GLGPAGCTAASTLAQAGKKILALE 34
           G+GP  C A   +   GK ++ ++
Sbjct: 418 GVGPRNCIAKFDIVPNGKTVIPIK 441


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/16 (56%), Positives = 13/16 (81%)

Query: 78  MSWHRNGYSTLFDILL 93
           M+  R+ +STLF+ILL
Sbjct: 88  MTLKRHKWSTLFEILL 103


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.134    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,032
Number of Sequences: 317
Number of extensions: 2455
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 245
length of database: 114,650
effective HSP length: 55
effective length of query: 190
effective length of database: 97,215
effective search space: 18470850
effective search space used: 18470850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)