Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001812-TA|BGIBMGA001812-PA|IPR002937|Amine oxidase
(245 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 34 0.022
SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces pom... 34 0.022
SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyc... 33 0.038
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 33 0.051
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 32 0.067
SPAC1556.02c |sdh1||succinate dehydrogenase Sdh1|Schizosaccharom... 31 0.20
SPAC22H10.12c |gdi1|sec19|GDP dissociation inhibitor Gdi1 |Schiz... 30 0.27
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 29 0.47
SPCC11E10.02c |gpi8||pig-K|Schizosaccharomyces pombe|chr 3|||Manual 28 1.4
SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi... 26 4.4
SPBP22H7.06 |||nicotinamide riboside kinase |Schizosaccharomyces... 26 4.4
SPAC16E8.14c |||methyltransferase |Schizosaccharomyces pombe|chr... 26 5.8
SPCC576.08c |rps2||40S ribosomal protein S2|Schizosaccharomyces ... 26 5.8
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 26 5.8
SPBC3F6.03 |trr1|caf4|thioredoxin reductase Trr1|Schizosaccharom... 26 5.8
SPBC26H8.01 |thi2|nmt2|thiazole biosynthetic enzyme|Schizosaccha... 25 7.7
SPAC12G12.12 |||NST UDP-galactose transporter|Schizosaccharomyce... 25 7.7
>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
Dld1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 33.9 bits (74), Expect = 0.022
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 5 YDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGG 41
YD ++G GP G AA AQ G K + +E + +GG
Sbjct: 46 YDLCVIGGGPGGYVAAIRGAQLGLKTICVEKRGTLGG 82
>SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 464
Score = 33.9 bits (74), Expect = 0.022
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 1 MATTYDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGG 41
++ +D +++G G G +A A+ G K+ +EA R+GG
Sbjct: 4 ISKVFDYLVIGGGSGGLASARRAAKHGAKVALIEASGRLGG 44
>SPBC713.12 |erg1||squalene monooxygenase Erg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 33.1 bits (72), Expect = 0.038
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 6 DTIIVGLGPAGCTAASTLAQAGKKILALE 34
D II+G G GC + L + G+K+L LE
Sbjct: 7 DIIIIGAGITGCALGAALGRQGRKVLVLE 35
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 32.7 bits (71), Expect = 0.051
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 9 IVGLGPAGCTAASTLAQAGKKILALEAQNRIGG 41
I+G GPAG AA L +AG ++ E +R GG
Sbjct: 1760 IIGSGPAGLAAADQLNRAGHHVVIYERADRPGG 1792
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 32.3 bits (70), Expect = 0.067
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 192 DDIVYLGFLWSKQDLDSLSD-EDQWMSKMEGPSQPMSSN 229
DDI F + QDL L D EDQW+S + P++S+
Sbjct: 175 DDIEGQEFSFDDQDLQMLQDIEDQWLSSQKQQGSPLTSD 213
>SPAC1556.02c |sdh1||succinate dehydrogenase
Sdh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 641
Score = 30.7 bits (66), Expect = 0.20
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 4 TYDTIIVGLGPAGCTAASTLAQAG 27
TYD I+VG G AG A LA+AG
Sbjct: 54 TYDAIVVGAGGAGLRATFGLAEAG 77
>SPAC22H10.12c |gdi1|sec19|GDP dissociation inhibitor Gdi1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 30.3 bits (65), Expect = 0.27
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 1 MATTYDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIG 40
M YD I++G G C + L+ GKK+L ++ + G
Sbjct: 1 MDEEYDVIVLGTGLTECVLSGLLSVDGKKVLHIDRNDYYG 40
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 29.5 bits (63), Expect = 0.47
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 2 ATTYDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGG 41
A I++G G AG +A +T+ G +L L+ GG
Sbjct: 36 ANNTQAIVIGGGLAGLSATNTILDLGGNVLLLDKNTAFGG 75
>SPCC11E10.02c |gpi8||pig-K|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 191 PDDIVYLGFLWSKQDLDSLSDEDQWMSKMEGPSQPMSSNDS 231
PDDI+ F + +D++ S++ WM E ++P +S
Sbjct: 277 PDDILITDFFGNVRDIELHSEKINWMLPGENTTKPSIKRNS 317
>SPAC20G8.04c |||mitochondrial electron transfer
flavoprotein-ubiquinone
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 6 DTIIVGLGPAGCTAASTLAQAGKK 29
D IVG GPAG +AA + Q K
Sbjct: 92 DVCIVGAGPAGLSAAIRIKQQAAK 115
>SPBP22H7.06 |||nicotinamide riboside kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 230
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 4 TYDTIIVGLGPAGCTAASTLAQ 25
T TIIVG+ A C+ STL Q
Sbjct: 2 TRKTIIVGVSGASCSGKSTLCQ 23
>SPAC16E8.14c |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 25.8 bits (54), Expect = 5.8
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 11/92 (11%)
Query: 123 EQLVTVSCKDGTKYTANNVIVTVSLGV-LKERYDKLFTPVLPSRKISAIQQISVGVIAKV 181
E LV C G NV++ ++ V L E + + I+VG+
Sbjct: 56 ENLVAADCGAGIGRVTENVLLKIASHVDLVEPVENFISTAKKQLATKPCSFINVGL---- 111
Query: 182 AMSFPAKWFPDDIVYLGFLWSKQDLDSLSDED 213
W P+ Y G +W++ L L+DED
Sbjct: 112 -----QNWTPEKNRY-GLIWNQWCLSHLTDED 137
>SPCC576.08c |rps2||40S ribosomal protein S2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 29 KILALEAQNRIGGRVKTVPF-----GDGVIELGAECWNDVTTQTHYVDLEGDQHMSWHRN 83
K++ ++ Q R G R + F DG + LG +C +V T + G + R
Sbjct: 81 KVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRR 140
Query: 84 GY 85
GY
Sbjct: 141 GY 142
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 25.8 bits (54), Expect = 5.8
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 161 VLPSRKISAIQQISVGVIAKVAMSFPAKWFPDDIV 195
VL SR S +Q ++ KV +SF + W+P D V
Sbjct: 1792 VLTSRMSSKVQDVAT----KVRVSFDSTWYPVDEV 1822
Score = 25.4 bits (53), Expect = 7.7
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 7/39 (17%)
Query: 197 LGFLWSKQDLDSLSDEDQWMSKMEGPSQPMSSNDSVTLW 235
LGFLWS Q +D W S + P Q ++ + T W
Sbjct: 1918 LGFLWSNQIVD-------WHSLNKSPLQYLTCESTSTSW 1949
>SPBC3F6.03 |trr1|caf4|thioredoxin reductase
Trr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 8 IIVGLGPAGCTAASTLAQAGKKILALE 34
+I+G GPAG TAA LA+ K + E
Sbjct: 7 VIIGSGPAGHTAAIYLARGELKPVMYE 33
>SPBC26H8.01 |thi2|nmt2|thiazole biosynthetic
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 328
Score = 25.4 bits (53), Expect = 7.7
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 6 DTIIVGLGPAGCTAASTLA--QAGKKILALEAQNRIGG 41
D +IVG G AG TAA + + KI +EA GG
Sbjct: 78 DIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPGG 115
>SPAC12G12.12 |||NST UDP-galactose transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 25.4 bits (53), Expect = 7.7
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 89 FDILLNTYKGGPGYPNLEIQLNKEVVLIEWPTDPEQLVTVSCKDGTKYTANNVIVTVSLG 148
F +L + GPGY +L+ K V + P + + G YT+ + I ++ G
Sbjct: 51 FYVLYKRHSQGPGYESLDHLPLKHKVFMALPAIMDICGSTLMNVGLLYTSAS-IYQMTRG 109
Query: 149 VLKERYDKLFTPVLPSRKISAIQQISVGVI 178
L + LF L R I +Q +S+ +
Sbjct: 110 SL-IIFVALFATTLLKRTIGQLQWLSLSFV 138
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.134 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,161,229
Number of Sequences: 5004
Number of extensions: 48862
Number of successful extensions: 128
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 116
Number of HSP's gapped (non-prelim): 18
length of query: 245
length of database: 2,362,478
effective HSP length: 71
effective length of query: 174
effective length of database: 2,007,194
effective search space: 349251756
effective search space used: 349251756
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)
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