GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001812-TA|BGIBMGA001812-PA|IPR002937|Amine oxidase
         (245 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    27   0.51 
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    27   0.51 
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    27   0.51 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    26   1.2  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   3.6  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   3.6  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    24   3.6  
AY748837-1|AAV28185.1|   97|Anopheles gambiae cytochrome P450 pr...    23   6.2  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   6.2  
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       23   8.2  

>AJ549085-1|CAD70159.1|  529|Anopheles gambiae
          thioredoxin-disulfide reductase protein.
          Length = 529

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 5  YDTIIVGLGPAGCTAASTLAQAGKKILALE 34
          YD +++G G  G   A    Q G K+  L+
Sbjct: 38 YDLVVIGGGSGGLACAKQAVQLGAKVAVLD 67


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae
          thioredoxin-disulfide reductase protein.
          Length = 505

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 5  YDTIIVGLGPAGCTAASTLAQAGKKILALE 34
          YD +++G G  G   A    Q G K+  L+
Sbjct: 14 YDLVVIGGGSGGLACAKQAVQLGAKVAVLD 43


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin
          reductase protein.
          Length = 502

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 5  YDTIIVGLGPAGCTAASTLAQAGKKILALE 34
          YD +++G G  G   A    Q G K+  L+
Sbjct: 11 YDLVVIGGGSGGLACAKQAVQLGAKVAVLD 40


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 83  NGYSTLFDILLNTYKGGPGYPNLEIQLNKEVVLIEWPTDP 122
           N Y T + ++++  +G PG P  +    + +V   +PT P
Sbjct: 429 NDYGTGYRVVMSRLRGSPGPPETDRAELERIVSDLFPTHP 468


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 205 DLDSLSDEDQWMSKMEGPSQPMSSNDSVTLWIVGDGAKSVR 245
           D+D L+ E+  ++ ++      +   S ++W + DG+K  R
Sbjct: 430 DIDPLATEEDIIAALDAKIGASAGVVSASIWELPDGSKRAR 470


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 106 EIQLNKEVVLIEWPTDPEQLVTVSCKDGTKYTANNVI 142
           E + N E+ L+E+P DP  +  V+ +   K  +N  +
Sbjct: 421 EYKFNVEIHLLEYPKDP-SITNVTVRIEEKLISNEAV 456


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 206 LDSLSDEDQWMSKMEGPSQPMSSNDSVTLWIVGDGAKSVR 245
           +D L+ E+     ++   Q  +    V++W + DG K  R
Sbjct: 287 IDPLASEEDLKEAVDRKLQASAGVTKVSMWQLSDGTKRAR 326


>AY748837-1|AAV28185.1|   97|Anopheles gambiae cytochrome P450
          protein.
          Length = 97

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 12 LGPAGCTAASTLAQAGKKILALEAQNRI 39
          LG  G TA   L +  KKIL    +NRI
Sbjct: 5  LGLHGATAQDRLYREAKKILPDPRENRI 32


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 10/40 (25%), Positives = 22/40 (55%)

Query: 206 LDSLSDEDQWMSKMEGPSQPMSSNDSVTLWIVGDGAKSVR 245
           +D L++E +  + ++   Q  +   +V++W + DG K  R
Sbjct: 313 IDPLAEEQELKAALKEELQVNAGVTAVSMWQLFDGMKRAR 352


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 59  CWNDVTTQTHYVDLEGDQHMSWHRNGYSTLFDI 91
           CW D+     +V  + D   +  + GY  +F+I
Sbjct: 281 CWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEI 313


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.134    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,652
Number of Sequences: 2123
Number of extensions: 10493
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 10
length of query: 245
length of database: 516,269
effective HSP length: 62
effective length of query: 183
effective length of database: 384,643
effective search space: 70389669
effective search space used: 70389669
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)