Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001812-TA|BGIBMGA001812-PA|IPR002937|Amine oxidase
(245 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35602-2|CAA84671.2| 783|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z81512-6|CAB04171.2| 452|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical ... 48 6e-06
AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z78198-5|CAB01571.1| 437|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of... 41 7e-04
AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical ... 41 7e-04
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z99281-35|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical p... 35 0.047
Z99281-34|CAB16511.1| 444|Caenorhabditis elegans Hypothetical p... 35 0.047
U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein. 35 0.047
Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical pr... 33 0.25
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 32 0.33
AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin r... 32 0.33
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 32 0.33
U23529-6|AAL32208.1| 384|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z81056-8|CAB02907.2| 307|Caenorhabditis elegans Hypothetical pr... 30 1.8
U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical pr... 30 1.8
U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein... 30 1.8
Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical p... 29 2.3
D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein su... 29 2.3
AF043693-6|AAB97539.1| 640|Caenorhabditis elegans Hypothetical ... 29 2.3
Z36949-1|CAA85415.1| 430|Caenorhabditis elegans Hypothetical pr... 27 9.4
U40270-1|AAC46954.1| 430|Caenorhabditis elegans ceOrc2p protein. 27 9.4
>Z35602-2|CAA84671.2| 783|Caenorhabditis elegans Hypothetical
protein R13G10.2 protein.
Length = 783
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 105 LEIQLNKEVVLIEWPTDPEQL-VTVSCKDGTKYTANNVIVTVSLGVLKERYDKLFTPVLP 163
L+I+LN V I+W D ++ + + + V++T SL VLK + K+F P LP
Sbjct: 530 LDIRLNCPVKCIDWGRDDRKVKIFFENAEQAAEEFDKVVITTSLSVLKSNHSKMFVPPLP 589
Query: 164 SRKISAIQQISVGVIAKVAMSFPAKWF 190
K AI + G+I K+A+ F +++
Sbjct: 590 IEKQKAIDDLGAGLIEKIAVKFDRRFW 616
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 9 IVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRV 43
I+G G +G + A L G + EA++R GGR+
Sbjct: 315 IIGAGISGISTARHLKHLGIDAVLFEAKDRFGGRM 349
>Z81512-6|CAB04171.2| 452|Caenorhabditis elegans Hypothetical
protein F25C8.2 protein.
Length = 452
Score = 48.4 bits (110), Expect = 5e-06
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 103 PNLEIQLNKEVVLIEWPTDPEQLVTVSCKDGTKYTANNVIVTVSLGVLKERYDKLFTPVL 162
P I+LN EV+ ++ E+ + V+ K+G + IVT SLG LK+ + LFTP L
Sbjct: 216 PAGNIRLNCEVINVK----EEENIMVTLKNGEVLHFDACIVTCSLGYLKKHHKTLFTPQL 271
Query: 163 PSRKISAIQQISVGVIAKVAMSFPAKWF 190
S K AI ++ G KV + + W+
Sbjct: 272 TSVKQDAINRMGFGNNLKVFLEYSDSWW 299
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/60 (38%), Positives = 29/60 (48%)
Query: 9 IVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRVKTVPFGDGVIELGAECWNDVTTQTH 68
I+G G AG +A Q G E NRIGGRV + DG + GAE N V + +
Sbjct: 11 IIGAGLAGLRSAIHFEQVGIDYTIFEGSNRIGGRVYPFEYQDGYLHFGAEYVNGVDNEVY 70
>AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical
protein C24G6.6 protein.
Length = 527
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 141 VIVTVSLGVLKERYDKLFTPVLPSRKISAIQQISVGVIAKVAMSFPAKWFPDDIVYLGFL 200
+IVT SLGVLK+ + K+FTP LP +KI AI++I G KV + ++ ++ + L
Sbjct: 284 IIVTSSLGVLKKYHHKMFTPPLPRQKIEAIEKIGFGGSCKVFFEWETPFWSNNTYSIAPL 343
Query: 201 ----WSKQDLDSLSDE 212
+ LD+ DE
Sbjct: 344 PVKGMIRDKLDAFEDE 359
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 9 IVGLGPAGCTAASTLAQAGKKILAL-EAQNRIGGRVKTVPFGDGVIELGAECWN 61
IVG G +G + A L + G + E +RIGGR+ +P+ DG +++GA+ N
Sbjct: 36 IVGAGISGLSTARRLIELGIDDFDIYEGLDRIGGRIHAIPYKDGFLQMGAQFIN 89
>AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical
protein B0019.1 protein.
Length = 724
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 3 TTYDTIIVGLGPAGCTAASTLAQ--AGKKILALEAQNRIGGRVK--TVPFGDGV--IELG 56
T YD I+VG G G TAA + Q G +L LEA+ ++GGR++ T+ +GV ++ G
Sbjct: 44 TIYDVIVVGAGLTGLTAARNIQQNRPGLSVLVLEARGQVGGRIRYATMQTRNGVEFVDTG 103
Query: 57 AECWNDVTTQ 66
++ + TQ
Sbjct: 104 SQFISPTDTQ 113
>AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical
protein F37C4.6 protein.
Length = 544
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 4 TYDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRVKT 45
+YD II+G G G TAA+ L +AGKK+ LE ++ +GG T
Sbjct: 14 SYDAIIIGGGHNGLTAAAYLTKAGKKVCVLERRHVVGGAAVT 55
>Z78198-5|CAB01571.1| 437|Caenorhabditis elegans Hypothetical
protein F55C5.6 protein.
Length = 437
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 9 IVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRVKTVPFGDGVIELGAECWN 61
I+G G AG AA + G E +RIGGRV + P+ +G ++ GAE N
Sbjct: 26 IIGAGFAGLRAAQRFEELGIVYTIFEGSDRIGGRVYSFPYQNGYLQFGAEYIN 78
>Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical
protein T08D10.2 protein.
Length = 737
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 105 LEIQLNKEVVLIEWPTDPEQLVTVSCKDGTK--YTANNVIVTVSLGVLKERY--DK---L 157
++I N+ V+ I+ + ++ + DG+ A+ V+ T+ +GVLK+ D+ +
Sbjct: 471 VKIHHNQRVIEIDTGSSDAVILKLRKPDGSVGILNADYVVSTLPIGVLKKTIIGDERAPV 530
Query: 158 FTPVLPSRKISAIQQISVGVIAKVAMSFPAKWFPDDI 194
F P LP K +AI+ + G+I K+ F +++P+ I
Sbjct: 531 FRPPLPKSKFAAIRSLGNGLINKIVFVFETRFWPESI 567
Score = 35.9 bits (79), Expect = 0.027
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 8 IIVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRVKTVPFGDG-VIELGAECWND---- 62
+++G G AG AA+ L G + +EA GGRV+++ G +IE G + +
Sbjct: 178 VVIGAGAAGIAAATQLLTFGFDVAVVEASGLTGGRVRSLISKHGELIETGCDSLRNLDES 237
Query: 63 -VTTQTHYVDL 72
+TT H V L
Sbjct: 238 VITTLLHQVPL 248
>AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of
presenilin 5 protein.
Length = 770
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 8 IIVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRVKTVPFGDG-VIELGAE 58
I++G G AG +AA+ L G ++ LEA+N IGGR+ + G ++E G +
Sbjct: 138 IVIGAGAAGISAATQLESFGFDVIVLEARNCIGGRIHSFKSKSGEIMETGGD 189
Score = 37.9 bits (84), Expect = 0.007
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 105 LEIQLNKEVVLIEWPTDPEQLVTVSCKDGT--KYTANNVIVTVSLGVLKERY--DK---L 157
L+I+L V+ I++ L+ V ++G + A V+ T+ +GVLK+ D+
Sbjct: 437 LDIRLKHRVLDIDYSGFEHVLLKVQRENGDIEEMKAAFVVSTLPIGVLKKTIIADERAPT 496
Query: 158 FTPVLPSRKISAIQQISVGVIAKVAMSF 185
FTP LP +K+ AI+ I G + K + F
Sbjct: 497 FTPSLPDKKVEAIRNIGCGSVNKCILEF 524
>AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical
protein Y40B1B.6 protein.
Length = 770
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 8 IIVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRVKTVPFGDG-VIELGAE 58
I++G G AG +AA+ L G ++ LEA+N IGGR+ + G ++E G +
Sbjct: 138 IVIGAGAAGISAATQLESFGFDVIVLEARNCIGGRIHSFKSKSGEIMETGGD 189
Score = 37.9 bits (84), Expect = 0.007
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 105 LEIQLNKEVVLIEWPTDPEQLVTVSCKDGT--KYTANNVIVTVSLGVLKERY--DK---L 157
L+I+L V+ I++ L+ V ++G + A V+ T+ +GVLK+ D+
Sbjct: 437 LDIRLKHRVLDIDYSGFEHVLLKVQRENGDIEEMKAAFVVSTLPIGVLKKTIIADERAPT 496
Query: 158 FTPVLPSRKISAIQQISVGVIAKVAMSF 185
FTP LP +K+ AI+ I G + K + F
Sbjct: 497 FTPSLPDKKVEAIRNIGCGSVNKCILEF 524
>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 36.3 bits (80), Expect = 0.020
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 9 IVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRVK 44
I+G GP+G AA+ L + G ++ E +NR+GG ++
Sbjct: 1851 IIGSGPSGLGAAAQLVKVGHTVVVYERKNRVGGLLR 1886
>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 36.3 bits (80), Expect = 0.020
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 9 IVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRVK 44
I+G GP+G AA+ L + G ++ E +NR+GG ++
Sbjct: 1851 IIGSGPSGLGAAAQLVKVGHTVVVYERKNRVGGLLR 1886
>Z99281-35|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical
protein Y57G11C.10b protein.
Length = 459
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 1 MATTYDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGG 41
M YD I++G G C + L+ +GKK+L ++ N GG
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGG 41
>Z99281-34|CAB16511.1| 444|Caenorhabditis elegans Hypothetical
protein Y57G11C.10a protein.
Length = 444
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 1 MATTYDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGG 41
M YD I++G G C + L+ +GKK+L ++ N GG
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGG 41
>U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein.
Length = 444
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 1 MATTYDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGG 41
M YD I++G G C + L+ +GKK+L ++ N GG
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGG 41
>Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical
protein LLC1.3 protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 6 DTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGG 41
D +++G GP G AA AQ G K + +E +GG
Sbjct: 31 DLVVIGGGPGGYVAAIKAAQLGMKTVCVEKNATLGG 66
>Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical
protein F52H3.2 protein.
Length = 638
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 3 TTYDTIIVGLGPAGCTAASTLAQAGKK-ILALEAQNRIGGRVKTVPFG 49
T D I++G G AGC +A+ A+ G +L + +N IG FG
Sbjct: 15 TDVDVIVIGGGHAGCESAAAAARCGSNTVLVTQNKNTIGEMSCNPSFG 62
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 4 TYDTIIVGLGPAGCTAASTLAQAGKKILALE 34
TYD I++G G G AA ++ GKK+ L+
Sbjct: 172 TYDLIVIGGGSGGLAAAKEASRLGKKVACLD 202
>AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin
reductase homolog protein.
Length = 525
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 4 TYDTIIVGLGPAGCTAASTLAQAGKKILALE 34
TYD I++G G G AA ++ GKK+ L+
Sbjct: 30 TYDLIVIGGGSGGLAAAKEASRLGKKVACLD 60
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 4 TYDTIIVGLGPAGCTAASTLAQAGKKILALE 34
TYD I++G G G AA ++ GKK+ L+
Sbjct: 172 TYDLIVIGGGSGGLAAAKEASRLGKKVACLD 202
>U23529-6|AAL32208.1| 384|Caenorhabditis elegans Hypothetical
protein C15B12.1 protein.
Length = 384
Score = 31.5 bits (68), Expect = 0.58
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Query: 1 MATTYDTIIVGLGPAGCTAASTLAQAGKKILALEAQNRIGGRVKTVPFGDGVIELGAECW 60
M+T YD ++VG G G A + G K L LE Q +G + +G +
Sbjct: 1 MSTDYDVVVVGAGIFGSCTAYNCQKIGLKTLLLE-QFELGHK-------NGSSHGKSRIT 52
Query: 61 NDVTTQTHYVDLEGDQH 77
T+ YVDL GD +
Sbjct: 53 RYAHTEVEYVDLVGDAY 69
>Z81056-8|CAB02907.2| 307|Caenorhabditis elegans Hypothetical
protein F09F3.12 protein.
Length = 307
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 147 LGVLKERYDKLFTPV-LPSRKISAIQQISVGVIAKVAMSFPAKWFPDDIVYLGFLWSKQD 205
+G+ R+ L+ P+ + I IS+GV +A+ F P D GFL+ +
Sbjct: 102 VGMSSNRFSSLYFPIQIMKANRYPITTISIGVAFIIAVVFTVIGLPKD---CGFLYFPET 158
Query: 206 LDSLSDE 212
L+ LS+E
Sbjct: 159 LEWLSEE 165
>U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical
protein C03G5.1 protein.
Length = 646
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 5 YDTIIVGLGPAGCTAASTLAQAGKK 29
YD ++VG G AG AA LA+ G K
Sbjct: 43 YDAVVVGAGGAGLRAAMGLAEGGLK 67
>U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein
721 protein.
Length = 597
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 5 YDTIIVGLGPAGCTAASTLAQAGKK 29
YD +IVG GP+G +AA L Q +K
Sbjct: 51 YDVVIVGGGPSGLSAAIRLRQLAEK 75
>Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical
protein C01G12.8 protein.
Length = 1049
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 154 YDKLFTPVLPS---RKISAIQQISVGVIAKVAMSFPAKWFPDDIVYLGFLWSKQDLDSLS 210
YDKL L +I AIQ + G + WFP D++ + W + +D L
Sbjct: 867 YDKLVNKRLVMFSYMQIGAIQACA-GFTTYFVLMMSNGWFPQDLLNISEQWDNKYIDDLE 925
Query: 211 DE--DQW 215
D QW
Sbjct: 926 DSYGQQW 932
>Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical
protein C01G12.8 protein.
Length = 1049
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 154 YDKLFTPVLPS---RKISAIQQISVGVIAKVAMSFPAKWFPDDIVYLGFLWSKQDLDSLS 210
YDKL L +I AIQ + G + WFP D++ + W + +D L
Sbjct: 867 YDKLVNKRLVMFSYMQIGAIQACA-GFTTYFVLMMSNGWFPQDLLNISEQWDNKYIDDLE 925
Query: 211 DE--DQW 215
D QW
Sbjct: 926 DSYGQQW 932
>D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein
subunit of complex II protein.
Length = 646
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 5 YDTIIVGLGPAGCTAASTLAQAGKK 29
YD ++VG G AG AA LA+ G K
Sbjct: 43 YDAVVVGAGGAGLRAAMGLAEEGLK 67
>AF043693-6|AAB97539.1| 640|Caenorhabditis elegans Hypothetical
protein C34B2.7 protein.
Length = 640
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 4 TYDTIIVGLGPAGCTAASTLAQAGKK 29
T+D ++VG G AG AA L++ G K
Sbjct: 35 TFDAVVVGAGGAGLRAAMGLSEGGMK 60
>Z36949-1|CAA85415.1| 430|Caenorhabditis elegans Hypothetical
protein F59E10.1 protein.
Length = 430
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 193 DIVYLGFLWSKQDLDSLSDEDQWMSKMEGPSQPMSSNDS 231
D +Y F+W+ + L SLS ++ E P Q + + DS
Sbjct: 272 DHIYSTFIWNSRQLSSLSFVHITINTFEIPLQELMTGDS 310
>U40270-1|AAC46954.1| 430|Caenorhabditis elegans ceOrc2p protein.
Length = 430
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 193 DIVYLGFLWSKQDLDSLSDEDQWMSKMEGPSQPMSSNDS 231
D +Y F+W+ + L SLS ++ E P Q + + DS
Sbjct: 272 DHIYSTFIWNSRQLSSLSFVHITINTFEIPLQELMTGDS 310
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.134 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,303,191
Number of Sequences: 27539
Number of extensions: 268337
Number of successful extensions: 607
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 570
Number of HSP's gapped (non-prelim): 39
length of query: 245
length of database: 12,573,161
effective HSP length: 79
effective length of query: 166
effective length of database: 10,397,580
effective search space: 1725998280
effective search space used: 1725998280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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