BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001811-TA|BGIBMGA001811-PA|IPR002086|Aldehyde dehydrogenase, IPR000648|Oxysterol-binding protein (610 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces p... 210 6e-55 SPBC1271.12 |kes1||oxysterol binding protein |Schizosaccharomyce... 114 3e-26 SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces po... 113 9e-26 SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 96 1e-20 SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 57 8e-09 SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 46 1e-05 SPBC337.14 |rpb4||DNA-directed RNA polymerase II complex subunit... 29 1.9 SPAC1B3.09c |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 28 4.3 SPBC609.04 |caf5||spermine family transmembrane transporter Caf5... 27 5.7 SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomy... 27 5.7 SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 27 5.7 SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 27 5.7 SPAP27G11.05c |vps41||vacuolar protein sorting-associated protei... 27 7.6 >SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces pombe|chr 3|||Manual Length = 489 Score = 210 bits (512), Expect = 6e-55 Identities = 129/343 (37%), Positives = 185/343 (53%), Gaps = 44/343 (12%) Query: 156 KSLLWFLLKQVRPGMDLSKVVLPTFILEPRSFLDKLSDNYYHADLLGQAQTLEDPYQRFK 215 K+++ ++ Q+RP MDLSKV PTF+LEP+S L+++++ H DLL Q DP RF Sbjct: 28 KNIILGIVSQLRPNMDLSKVTFPTFVLEPKSMLERITNFMSHPDLLLNVQKTADPEMRFL 87 Query: 216 SVLRWYLSGLYRKPKGLKKPYNPVLGETFRCCWK-----HRQP-----ESYTYYVAEQVS 265 V+R+Y+SG + +P+G+KKP NP+LGETF WK + P Y AEQV Sbjct: 88 DVVRFYMSGWHIRPRGVKKPLNPILGETFTGFWKFPPSNSKDPNLQKLHGIAVYAAEQVC 147 Query: 266 HHPPISAFYISNRKEGYVIEGSLLARSKFYGNSTSAILEGCARIHLLNWGETYVTTAPYA 325 HHPPISA++ + I+G + RS+F GNS ++I+EG A I L + E Y+ T P Sbjct: 148 HHPPISAYFYLCPEYKVRIDGVVKPRSRFLGNSAASIMEGIASIKLQDLDEEYLITQPNV 207 Query: 326 HCKGIVIGTLSMELGG-------------------KSFLGGSDQTNAISGRIKKGK--DT 364 + +GI+ G + +ELG K F+ G+ N+I+G++K+ + Sbjct: 208 YARGILFGKMRLELGDHVTVRCPKTDLQADIEFKVKGFISGT--YNSIAGKVKRVSTGEV 265 Query: 365 VATVEGYWDGXXXXXXXXTGEESNLLDVGFLKEQRLPRYLVR---LENQQDYESQRLWLK 421 + + G WD TGE LLDV + YLV LE Q + ESQRLW K Sbjct: 266 LYKISGKWDSEMSVESVKTGETRPLLDV-----SKHDVYLVSARPLEEQGERESQRLWYK 320 Query: 422 VSEAIQNDDQIAATEQKTVIEEAQRARARNLV---APWVPRYF 461 +A+ DQ ATE K+ IE+ QR A+ W P+YF Sbjct: 321 TCQAVIARDQTTATETKSAIEDRQREEAKQREIENVQWKPKYF 363 >SPBC1271.12 |kes1||oxysterol binding protein |Schizosaccharomyces pombe|chr 2|||Manual Length = 388 Score = 114 bits (275), Expect = 3e-26 Identities = 95/309 (30%), Positives = 138/309 (44%), Gaps = 32/309 (10%) Query: 171 DLSKVVLPTFILEPRSFLDKLSDNYYHADLLGQAQTLEDPYQRFKSVLRWYLSGLYRKPK 230 DLS + P+FIL S ++ + H +L E P +R V +W+ S L + Sbjct: 40 DLSSLTAPSFILSSTSLIEYSAYWAEHPELFISLPRGETPLERQLLVTKWFASTLKNQYA 99 Query: 231 GL-------KKPYNPVLGETFRCCWKHRQPESYTYYVAEQVSHHPPISAFYISNRKEGYV 283 KKP NP+LGE F W E T +EQVSHHPPI+A++I N+K G Sbjct: 100 ARNERYGSEKKPLNPILGELFTGKWNTDIGED-TELTSEQVSHHPPITAYHIYNKKAGVR 158 Query: 284 IEGSLLARSKFYGNSTSAILEGCARIHLLNWGETYVTTAPYAHCKGIVIGTLSMELGGKS 343 +EG +S F G G AR+ L E Y T P +G+ G+ +ELG KS Sbjct: 159 LEGYNGHKSGFSGPQIHVKQIGHARLILEPHNEVYYITFPLVTLEGLWYGSPYIELGKKS 218 Query: 344 FL---GGSDQTNAISGR----------------IKKGKDTVATVEGYWDGXXXXXXXXTG 384 ++ G T SG+ K + + +EG W G Sbjct: 219 YIISTSGYLTTIEYSGKGYFTGKKNTFKATIVNAKTKSEPIYRIEGSWTGMLKYCTFEDQ 278 Query: 385 EES---NLLDVGFLKEQRLPRYLVRLENQQDYESQRLWLKVSEAIQNDDQIAATEQKTVI 441 + S + LD G K + + +E Q +YES+R+W + A+ D AA+++K+ I Sbjct: 279 KRSAWEDFLDCGNYKPVNIS--VAPIEEQGEYESRRVWKNFAVALDAGDYAAASQEKSKI 336 Query: 442 EEAQRARAR 450 EE QR R Sbjct: 337 EEGQRELRR 345 >SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces pombe|chr 2|||Manual Length = 399 Score = 113 bits (271), Expect = 9e-26 Identities = 98/333 (29%), Positives = 152/333 (45%), Gaps = 38/333 (11%) Query: 159 LWFLLKQVRPGMDLSKVVLPTFILEPRSFLDKLSDNYYHADLLGQAQTLEDPYQRFKSVL 218 +W+L K+ G DLS + P+FIL S L+ +S + +L P +R +VL Sbjct: 28 IWYLEKKKSTG-DLSTLSAPSFILSGTSLLEYMSYWFEFPELFVTIVDFPTPKERMLAVL 86 Query: 219 RWYLSGLYR------KPKGL-KKPYNPVLGETFRCCWKHRQPESYTYYVAEQVSHHPPIS 271 +WY++GL R K G KKP NP+LGE F W + + AEQVSHH P S Sbjct: 87 KWYITGLSREYASRNKNYGTEKKPLNPILGELFYGSWDSSKGK--VELTAEQVSHHGPES 144 Query: 272 AFYISNRKEGYVIEGSLLARSKFYGNSTSAILEGCARIHLLNWGETYVTTAPYAHCKGIV 331 A ++ ++ G ++ RS F G + G R+HL + ETY T P +G+ Sbjct: 145 AAHVVCKEAGITVDTHNKYRSGFSGRTVYVNQLGQLRVHLEKYNETYYITLPNISLEGLW 204 Query: 332 IGTLSMELGGKSFLGGSDQTNAI-----SGR--------------IKKGKDTVATVEGYW 372 +EL G +++ + TN I SGR +K +D VEG W Sbjct: 205 FMAPYIELYGSTYIVSN--TNYITKIDYSGRGYFRGTKNSFKATIFEKNEDPDYIVEGVW 262 Query: 373 DGXXXXXXXXTGEESNLLDVGFLKEQRLPRYLVRLENQQ-DYESQRLWLKVSEAIQNDDQ 431 G L + L+ + V+ E++ D+ES+ +W +VS A+ + + Sbjct: 263 TGESKLTIPSLKSTIFFLSIPSLEATPIT---VKPESEMGDWESRNVWKEVSAALASGNY 319 Query: 432 IAATEQKTVIEEAQRARARNLVAP---WVPRYF 461 + +K+ IE++QR + A W RYF Sbjct: 320 DIVSSKKSTIEQSQRDMRKKEEAEGAVWARRYF 352 >SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 1310 Score = 95.9 bits (228), Expect = 1e-20 Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 10/190 (5%) Query: 156 KSLLWFLLKQVRPGMDLSKVVLPTFILEPRSFLDKLSDNYYHADLLGQAQTLEDPYQRFK 215 K LW +LK + G D++K+ LP EP S L +++++ + +LL QA +DPYQR Sbjct: 935 KISLWGILKGMI-GKDMTKMTLPVSFNEPTSLLQRVAEDMEYTELLDQASHNKDPYQRIL 993 Query: 216 SVLRWYLSGLYRKPKGLKKPYNPVLGETFRCCWKHRQPESYTYYVAEQVSHHPPISAFYI 275 V + S + KP+NP+LGET+ C P+ ++ EQVSHHPP+ A Y Sbjct: 994 YVAAFAASEYASTLNRVAKPFNPLLGETYEFC----HPQRGFRFIVEQVSHHPPVGAAYS 1049 Query: 276 SNRKEGYVIEGSLLARSKFYGNSTSAILEGCARIHLLNWG---ETYVTTAPYAHCKGIVI 332 + Y E S+ +SKFYG S G + L + E Y + GI++ Sbjct: 1050 ESANWKYYGESSV--KSKFYGKSFDISPLGTWFLELRHPSGEVELYTWKKVTSSVVGIIL 1107 Query: 333 GTLSMELGGK 342 G+ S++ G+ Sbjct: 1108 GSPSVDNYGQ 1117 Score = 28.3 bits (60), Expect = 3.3 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Query: 425 AIQNDDQIAATEQKTVIEEAQRARAR----NLVAPWVPRYFHRATQGTVPDGSPWQ 476 A++N A +K +EE QR + R + PW PR+F A + V WQ Sbjct: 1225 AMENGQYDLAASEKNRLEEKQRKKRRMREQGEMPPWSPRWF-SAAKHPVTGEDYWQ 1279 >SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 945 Score = 56.8 bits (131), Expect = 8e-09 Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 11/184 (5%) Query: 157 SLLWFLLKQVRPGMDLSKVVLPTFILEPRSFLDKLSDNYYHADLLGQAQTLEDPYQRF-- 214 S+L L K + G D+S + P EP + L + +++ ++++L +A +D + F Sbjct: 572 SILSILRKNI--GKDISSIPAPVVSNEPCNLLQRCAEDLEYSNMLDKANECDDDIKIFYV 629 Query: 215 KSVLRWYLSGLYRKPKGLKKPYNPVLGETFRCCWKHRQPESYTYYVAEQVSHHPPISAFY 274 + S + K + ++K ++P+LGETF R+ +Y ++AE+V H P I A + Sbjct: 630 AAFAVSNFSNMRHKERSVRKVFSPLLGETFELV---REDRNYR-FLAEKVCHRPLIIACH 685 Query: 275 ISNRKEGYVIEGSLLARSKFYGNSTSAILEGCARIHLLNWGETYVTTAPYAHCKGIVIGT 334 +R ++ S KF+G S G I L G + P K + IG Sbjct: 686 AESR--NWIWNHSPKPIQKFWGKSVELNTLGPVTIKLA-CGTEFSFMKPACFLKNVAIGE 742 Query: 335 LSME 338 +E Sbjct: 743 KYVE 746 >SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces pombe|chr 2|||Manual Length = 516 Score = 46.4 bits (105), Expect = 1e-05 Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 6/100 (6%) Query: 158 LLWFLLKQVRPGMDLSKV--VLPTFILEPRSFLDKLSDNYY-HADLLGQAQTLEDPYQRF 214 L+ +LKQ D++ + LP +LEP L+ NY D +D +R Sbjct: 42 LVLSILKQCIGVKDIASLRFSLPAQLLEPVGNLEYW--NYVDRPDYFAVMGDSDDELERM 99 Query: 215 KSVLRWYLSGLYRKPKG-LKKPYNPVLGETFRCCWKHRQP 253 VLRW+ + R +G + KPYN VLGE FRC W P Sbjct: 100 LGVLRWWFTKDLRFVRGRVVKPYNSVLGEFFRCKWVVTDP 139 Score = 40.3 bits (90), Expect = 8e-04 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 4/85 (4%) Query: 259 YVAEQVSHHPPISAFYISNRKEGYVIEGSLLARSKFYGNSTSAILEGCARIHLLNW---- 314 ++AEQ SHHP +SAFY++ +G + G F G S + + + Sbjct: 246 FMAEQTSHHPAVSAFYVTCPSKGIEVYGQDQIAVGFTGTSFKVCAGDLNKGVYVRFNKRD 305 Query: 315 GETYVTTAPYAHCKGIVIGTLSMEL 339 E Y+ T P A GI+ G L + L Sbjct: 306 NEEYLCTHPSASVGGILRGNLHINL 330 Score = 39.5 bits (88), Expect = 0.001 Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 19/176 (10%) Query: 298 STSAILEGCARIHLLNWGETYVTTAPYAHCKGIVIGTLSMELGG-KSFLGGS----DQTN 352 S IL G I+LL ++ V P K I+ LG +S + G D +N Sbjct: 317 SVGGILRGNLHINLL---DSTVILCPKTRIKTIITYIEERWLGKPRSLVEGVCYRYDPSN 373 Query: 353 AISGRIKK--GKDTVATVEGYWDGXXXXXXXXTGEESNLLDVGFLK--EQRLPRYLVRLE 408 IK ++ +AT +G W E L+D+ L +R P L+ Sbjct: 374 DTIDSIKAVPKENILATFKGNWRNCIFYSYAGESESRMLVDLNELDLVHKRCPP----LD 429 Query: 409 NQQDYESQRLWLKVSEAIQNDDQIAATEQKTVIEEAQR---ARARNLVAPWVPRYF 461 Q +ES+++W V+ I AT+ K IE+ QR A W PR+F Sbjct: 430 KQFPFESRKIWFPVTHNILAKHYTQATKAKQEIEDQQRQASAAREESHTEWKPRFF 485 >SPBC337.14 |rpb4||DNA-directed RNA polymerase II complex subunit Rpb4|Schizosaccharomyces pombe|chr 2|||Manual Length = 135 Score = 29.1 bits (62), Expect = 1.9 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Query: 413 YESQRLWLKVSEAIQNDDQIAATEQKTVIEE--AQRARARN 451 +E LK+ +N+D + +E K +IE AQRAR N Sbjct: 6 FEEDAAQLKLGPEFENEDMLTVSEAKILIETVLAQRARETN 46 >SPAC1B3.09c |||Noc2p-Noc3p complex subunit Noc2 family |Schizosaccharomyces pombe|chr 1|||Manual Length = 528 Score = 27.9 bits (59), Expect = 4.3 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 10/89 (11%) Query: 485 EDFVIRTLRSGGGS-PRAGPETRHRERDL------SHRASDSDSRDELARRSKTSTRTLK 537 ED + + S G S + + R E+DL + S ++ D L K + LK Sbjct: 80 EDISVLNVNSKGASLNQVSTQKRRSEKDLLAAIAYCQKLSGTNQADALW---KNVEKDLK 136 Query: 538 QTLYSIDANLREQKLAIMRLSKAVDLLTE 566 +TL ++D + R + L +RL A LLT+ Sbjct: 137 ETLDNVDFDARSKILQDLRLEYAEILLTK 165 >SPBC609.04 |caf5||spermine family transmembrane transporter Caf5|Schizosaccharomyces pombe|chr 2|||Manual Length = 531 Score = 27.5 bits (58), Expect = 5.7 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Query: 392 VGFLKEQ---RLPRYLVRLENQQDYESQRLWLKVSEAIQND 429 +GFL+E L Y+ N D E R+W +S+ ND Sbjct: 1 MGFLRETVFGELVEYVSHNSNDNDLEKLRVWKDISKVDSND 41 >SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomyces pombe|chr 1|||Manual Length = 754 Score = 27.5 bits (58), Expect = 5.7 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Query: 426 IQNDDQIAATEQKTVIEEAQRARARNLVAPWVPRYFHRATQG-TVPDGSPWQPDEVLEYE 484 + ++ IAA EQK E A++A+ A + R +G T P E L ++ Sbjct: 646 VDAEELIAAREQKLEEERAKQAKKAQAKAEQEKKQVERVMKGKTSPSEMFKMFKEYLSFD 705 Query: 485 EDFVIRTLRSGGGSPRAGPETRHRE 509 E + +R GS P++R ++ Sbjct: 706 EAGLPTKMRGEDGSEIDVPKSRKKK 730 >SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pombe|chr 2|||Manual Length = 577 Score = 27.5 bits (58), Expect = 5.7 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 5/66 (7%) Query: 491 TLRSGGGS--PRAGPETRHRERDLSHRASDSDSRDELARRSKTSTRTLK---QTLYSIDA 545 +L + GGS P P R E ++S A+ D R+EL + + TL+ Q+ Y ID Sbjct: 377 SLATVGGSIIPEMFPTFRVYEYNISDIANQLDDREELTEITSFNWETLEEQSQSDYEIDK 436 Query: 546 NLREQK 551 +++K Sbjct: 437 KKKKKK 442 >SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual Length = 1279 Score = 27.5 bits (58), Expect = 5.7 Identities = 17/60 (28%), Positives = 27/60 (45%) Query: 484 EEDFVIRTLRSGGGSPRAGPETRHRERDLSHRASDSDSRDELARRSKTSTRTLKQTLYSI 543 E+ F ++G PR R + S SDS SRD++ + + + K TL S+ Sbjct: 84 EDAFPTLLSKTGPSKPRIVSWVRKTASNTSVAGSDSVSRDKIPFSASSRASSTKSTLSSV 143 >SPAP27G11.05c |vps41||vacuolar protein sorting-associated protein Vps41|Schizosaccharomyces pombe|chr 1|||Manual Length = 886 Score = 27.1 bits (57), Expect = 7.6 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Query: 274 YISNRKEGYVIEGS-----LLARSKFYGNSTSAILEGCARIHLLNWGETYVTTA 322 Y S R V+ G +L+ + GN + + C ++ ++W TY+ A Sbjct: 131 YYSTRSSRQVLSGGRAGKVVLSEKGWLGNKDTVLQADCGAVYKISWYTTYIAWA 184 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.135 0.405 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,710,024 Number of Sequences: 5004 Number of extensions: 113349 Number of successful extensions: 290 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 269 Number of HSP's gapped (non-prelim): 19 length of query: 610 length of database: 2,362,478 effective HSP length: 77 effective length of query: 533 effective length of database: 1,977,170 effective search space: 1053831610 effective search space used: 1053831610 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 57 (27.1 bits)
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