Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001811-TA|BGIBMGA001811-PA|IPR002086|Aldehyde
dehydrogenase, IPR000648|Oxysterol-binding protein
(610 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical pr... 355 4e-98
Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical pr... 355 4e-98
Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical pr... 355 4e-98
AF000195-8|AAN84853.1| 400|Caenorhabditis elegans Oxysterol bin... 143 4e-34
AF000195-7|AAC24270.1| 676|Caenorhabditis elegans Oxysterol bin... 143 4e-34
Z81061-1|CAB02934.3| 436|Caenorhabditis elegans Hypothetical pr... 93 7e-19
AL117202-15|CAC42376.1| 627|Caenorhabditis elegans Hypothetical... 62 1e-09
AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical... 62 1e-09
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 31 3.1
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 30 4.1
U28742-2|AAA68332.2| 925|Caenorhabditis elegans Adaptin, alpha ... 30 4.1
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 30 4.1
U53141-3|AAA96105.3| 596|Caenorhabditis elegans Hypothetical pr... 30 5.5
Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical p... 29 7.2
Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical p... 29 7.2
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 29 7.2
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 29 7.2
AC006831-1|AAF39995.1| 558|Caenorhabditis elegans Hypothetical ... 29 7.2
Z70750-4|CAA94739.2| 187|Caenorhabditis elegans Hypothetical pr... 29 9.5
>Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 355 bits (874), Expect = 4e-98
Identities = 209/522 (40%), Positives = 297/522 (56%), Gaps = 39/522 (7%)
Query: 115 HEDPTARKQSVLAR---IERSYIEDPDXXXXXXXXXXXXXXXXNKSLLWFLLKQVRPGMD 171
HED + S R E ++I P NKSL+W LLKQ+RPGMD
Sbjct: 224 HEDGKMSETSDTIREAFTESAWIPSPKEVFGPDGSLTEEVGEENKSLIWTLLKQIRPGMD 283
Query: 172 LSKVVLPTFILEPRSFLDKLSDNYYHADLLGQAQTLEDPYQRFKSVLRWYLSGLYRKPKG 231
LSKVVLPTFILEPRSFL+KL+D YYHADL+ +A DP+QR V +++LSG Y+KPKG
Sbjct: 284 LSKVVLPTFILEPRSFLEKLADYYYHADLISEAVAEPDPFQRIVKVTKFFLSGFYKKPKG 343
Query: 232 LKKPYNPVLGETFRCCWKHRQPESYTYYVAEQVSHHPPISAFYISNRKEGYVIEGSLLAR 291
LKKPYNP+LGETFRC W+H S T+Y+AEQVSHHPP+S+ +I+NRK G+ I G++LA+
Sbjct: 344 LKKPYNPILGETFRCKWEH-PDGSTTFYMAEQVSHHPPVSSLFITNRKAGFNISGTILAK 402
Query: 292 SKFYGNSTSAILEGCARIHLLNWGETYVTTAPYAHCKGIVIGTLSMELGG---------- 341
SK+YGNS SAIL G R+ LLN GETY+ PYA+CKGI+IGT++MELGG
Sbjct: 403 SKYYGNSLSAILAGKLRLTLLNLGETYIVNLPYANCKGIMIGTMTMELGGEVNIECEKTG 462
Query: 342 ---------KSFLGGSDQTNAISGRIKKGKDTVATVEGYWDGXXXXXXXXTGEESNLLDV 392
K LGG+ N I G IK G D +A++EG WDG G++
Sbjct: 463 YRTTLDFKLKPMLGGA--YNQIEGSIKYGSDRLASIEGAWDG-VIRIKGPDGKKELWNPT 519
Query: 393 GFLKEQRLPRYLVRLENQQDYESQRLWLKVSEAIQNDDQIAATEQKTVIEEAQRARARNL 452
+ + RLPRY + ++ Q ++ES +LW V+EAI N+DQ ATE+KT +E QRARA++
Sbjct: 520 PEVIKTRLPRYEINMDEQGEWESAKLWRHVTEAISNEDQYKATEEKTALENDQRARAKSG 579
Query: 453 VAPWVPRYFHRATQGTV----PDGSPW-QPDEVLEYEEDFVIRTLRSGGGSPRAGPETRH 507
+ P ++F + D PW +++ + E ++V++T+ S R +
Sbjct: 580 I-PHETKFFKKQHGDDYVYIHADYRPWDNNNDIQQIENNYVVKTI--SRHSKRKTGNSEQ 636
Query: 508 RERDLSHRASDSDSRDELARRSKTSTRTLKQTLYSIDANLREQKLAIMRLSKAVDLLTEG 567
D + AS+SD +E+ + I + +++ I + + +L
Sbjct: 637 LGSDNTSEASESD--EEVIEPKIKKKEIVPAKSKPITPEVADER--IKEMERKFELAIRR 692
Query: 568 QKATRPQSLGRVPSTGHSWDLFGGFVLAMVLQALLNWIFYQK 609
+A + R + S LF FV+ V+Q++ + +K
Sbjct: 693 MEAANERQSSRTLNAIQSTLLF-VFVVTSVVQSIFMFFMLRK 733
>Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 355 bits (874), Expect = 4e-98
Identities = 209/522 (40%), Positives = 297/522 (56%), Gaps = 39/522 (7%)
Query: 115 HEDPTARKQSVLAR---IERSYIEDPDXXXXXXXXXXXXXXXXNKSLLWFLLKQVRPGMD 171
HED + S R E ++I P NKSL+W LLKQ+RPGMD
Sbjct: 224 HEDGKMSETSDTIREAFTESAWIPSPKEVFGPDGSLTEEVGEENKSLIWTLLKQIRPGMD 283
Query: 172 LSKVVLPTFILEPRSFLDKLSDNYYHADLLGQAQTLEDPYQRFKSVLRWYLSGLYRKPKG 231
LSKVVLPTFILEPRSFL+KL+D YYHADL+ +A DP+QR V +++LSG Y+KPKG
Sbjct: 284 LSKVVLPTFILEPRSFLEKLADYYYHADLISEAVAEPDPFQRIVKVTKFFLSGFYKKPKG 343
Query: 232 LKKPYNPVLGETFRCCWKHRQPESYTYYVAEQVSHHPPISAFYISNRKEGYVIEGSLLAR 291
LKKPYNP+LGETFRC W+H S T+Y+AEQVSHHPP+S+ +I+NRK G+ I G++LA+
Sbjct: 344 LKKPYNPILGETFRCKWEH-PDGSTTFYMAEQVSHHPPVSSLFITNRKAGFNISGTILAK 402
Query: 292 SKFYGNSTSAILEGCARIHLLNWGETYVTTAPYAHCKGIVIGTLSMELGG---------- 341
SK+YGNS SAIL G R+ LLN GETY+ PYA+CKGI+IGT++MELGG
Sbjct: 403 SKYYGNSLSAILAGKLRLTLLNLGETYIVNLPYANCKGIMIGTMTMELGGEVNIECEKTG 462
Query: 342 ---------KSFLGGSDQTNAISGRIKKGKDTVATVEGYWDGXXXXXXXXTGEESNLLDV 392
K LGG+ N I G IK G D +A++EG WDG G++
Sbjct: 463 YRTTLDFKLKPMLGGA--YNQIEGSIKYGSDRLASIEGAWDG-VIRIKGPDGKKELWNPT 519
Query: 393 GFLKEQRLPRYLVRLENQQDYESQRLWLKVSEAIQNDDQIAATEQKTVIEEAQRARARNL 452
+ + RLPRY + ++ Q ++ES +LW V+EAI N+DQ ATE+KT +E QRARA++
Sbjct: 520 PEVIKTRLPRYEINMDEQGEWESAKLWRHVTEAISNEDQYKATEEKTALENDQRARAKSG 579
Query: 453 VAPWVPRYFHRATQGTV----PDGSPW-QPDEVLEYEEDFVIRTLRSGGGSPRAGPETRH 507
+ P ++F + D PW +++ + E ++V++T+ S R +
Sbjct: 580 I-PHETKFFKKQHGDDYVYIHADYRPWDNNNDIQQIENNYVVKTI--SRHSKRKTGNSEQ 636
Query: 508 RERDLSHRASDSDSRDELARRSKTSTRTLKQTLYSIDANLREQKLAIMRLSKAVDLLTEG 567
D + AS+SD +E+ + I + +++ I + + +L
Sbjct: 637 LGSDNTSEASESD--EEVIEPKIKKKEIVPAKSKPITPEVADER--IKEMERKFELAIRR 692
Query: 568 QKATRPQSLGRVPSTGHSWDLFGGFVLAMVLQALLNWIFYQK 609
+A + R + S LF FV+ V+Q++ + +K
Sbjct: 693 MEAANERQSSRTLNAIQSTLLF-VFVVTSVVQSIFMFFMLRK 733
>Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical
protein ZK1086.1b protein.
Length = 770
Score = 355 bits (874), Expect = 4e-98
Identities = 209/522 (40%), Positives = 297/522 (56%), Gaps = 39/522 (7%)
Query: 115 HEDPTARKQSVLAR---IERSYIEDPDXXXXXXXXXXXXXXXXNKSLLWFLLKQVRPGMD 171
HED + S R E ++I P NKSL+W LLKQ+RPGMD
Sbjct: 261 HEDGKMSETSDTIREAFTESAWIPSPKEVFGPDGSLTEEVGEENKSLIWTLLKQIRPGMD 320
Query: 172 LSKVVLPTFILEPRSFLDKLSDNYYHADLLGQAQTLEDPYQRFKSVLRWYLSGLYRKPKG 231
LSKVVLPTFILEPRSFL+KL+D YYHADL+ +A DP+QR V +++LSG Y+KPKG
Sbjct: 321 LSKVVLPTFILEPRSFLEKLADYYYHADLISEAVAEPDPFQRIVKVTKFFLSGFYKKPKG 380
Query: 232 LKKPYNPVLGETFRCCWKHRQPESYTYYVAEQVSHHPPISAFYISNRKEGYVIEGSLLAR 291
LKKPYNP+LGETFRC W+H S T+Y+AEQVSHHPP+S+ +I+NRK G+ I G++LA+
Sbjct: 381 LKKPYNPILGETFRCKWEH-PDGSTTFYMAEQVSHHPPVSSLFITNRKAGFNISGTILAK 439
Query: 292 SKFYGNSTSAILEGCARIHLLNWGETYVTTAPYAHCKGIVIGTLSMELGG---------- 341
SK+YGNS SAIL G R+ LLN GETY+ PYA+CKGI+IGT++MELGG
Sbjct: 440 SKYYGNSLSAILAGKLRLTLLNLGETYIVNLPYANCKGIMIGTMTMELGGEVNIECEKTG 499
Query: 342 ---------KSFLGGSDQTNAISGRIKKGKDTVATVEGYWDGXXXXXXXXTGEESNLLDV 392
K LGG+ N I G IK G D +A++EG WDG G++
Sbjct: 500 YRTTLDFKLKPMLGGA--YNQIEGSIKYGSDRLASIEGAWDG-VIRIKGPDGKKELWNPT 556
Query: 393 GFLKEQRLPRYLVRLENQQDYESQRLWLKVSEAIQNDDQIAATEQKTVIEEAQRARARNL 452
+ + RLPRY + ++ Q ++ES +LW V+EAI N+DQ ATE+KT +E QRARA++
Sbjct: 557 PEVIKTRLPRYEINMDEQGEWESAKLWRHVTEAISNEDQYKATEEKTALENDQRARAKSG 616
Query: 453 VAPWVPRYFHRATQGTV----PDGSPW-QPDEVLEYEEDFVIRTLRSGGGSPRAGPETRH 507
+ P ++F + D PW +++ + E ++V++T+ S R +
Sbjct: 617 I-PHETKFFKKQHGDDYVYIHADYRPWDNNNDIQQIENNYVVKTI--SRHSKRKTGNSEQ 673
Query: 508 RERDLSHRASDSDSRDELARRSKTSTRTLKQTLYSIDANLREQKLAIMRLSKAVDLLTEG 567
D + AS+SD +E+ + I + +++ I + + +L
Sbjct: 674 LGSDNTSEASESD--EEVIEPKIKKKEIVPAKSKPITPEVADER--IKEMERKFELAIRR 729
Query: 568 QKATRPQSLGRVPSTGHSWDLFGGFVLAMVLQALLNWIFYQK 609
+A + R + S LF FV+ V+Q++ + +K
Sbjct: 730 MEAANERQSSRTLNAIQSTLLF-VFVVTSVVQSIFMFFMLRK 770
>AF000195-8|AAN84853.1| 400|Caenorhabditis elegans Oxysterol
binding protein (osbp)related protein 4, isoform b
protein.
Length = 400
Score = 143 bits (346), Expect = 4e-34
Identities = 122/350 (34%), Positives = 165/350 (47%), Gaps = 53/350 (15%)
Query: 157 SLLWFLLKQVRPGMDLSKVVLPTFILEPRSFLDKLSDNYYHADLLGQAQTLEDPYQRFKS 216
S+L LL QV GMDL+KV LPTFILE RS L+ +D + H DL + +R +
Sbjct: 38 SVLMHLLSQVSVGMDLTKVTLPTFILERRSLLEMYADFFAHPDLFIATNGNDSAEKRMIA 97
Query: 217 VLRWYLSGLY--RKPKGLKKPYNPVLGETFRCCW-------KHRQPESYTY--------- 258
V+R+YL+ Y RK KKPYN +LGETFRC + ++ ES +
Sbjct: 98 VVRYYLNSFYAARKSGVAKKPYNAILGETFRCRYSVPNSSLSGKKTESGPWPGSDEKQLT 157
Query: 259 YVAEQVSHHPPISAFYISNRKEGYVIEGSLLARSKFYGNS--TSAILEGCARIHLLNWG- 315
++AEQVSHHPPISAFY EG + +S F G S ++I EG +H N+G
Sbjct: 158 FIAEQVSHHPPISAFYAEMPSEGISFNAHIYTKSSFLGLSIGVASIGEGILTLH--NYGD 215
Query: 316 ETYVTTAPYAHCKGIVIGTLSMELGG-------------------KSFLGGSDQTNAISG 356
E Y T P + + I + T E GG K F GG + + I G
Sbjct: 216 EQYTITFPSGYGRSI-MSTPWFEFGGKVKVECEKTGYRADIEFLTKPFFGG--KPHRIQG 272
Query: 357 RIKK--GKDTVATVEGYWDGXXXXXXXXTGEESNLLDVGFLKEQRLPRYLVRLENQQDYE 414
I + K V T+ G W+G GEE +DV E + + V + Q E
Sbjct: 273 SICRDGAKKPVLTLRGEWNG-TMYAKTQNGEEYVFVDVKAKPE--VKKECVPVMQQGKRE 329
Query: 415 SQRLWLKVSEAIQNDDQIAATEQKTVIEEAQRARARNLV---APWVPRYF 461
S+RLW V+ A+ + AT K IE+ QR A+ + W P F
Sbjct: 330 SRRLWRHVTAALLRNRIQTATTSKRFIEQRQRKEAKERLESGEKWTPLLF 379
>AF000195-7|AAC24270.1| 676|Caenorhabditis elegans Oxysterol
binding protein (osbp)related protein 4, isoform a
protein.
Length = 676
Score = 143 bits (346), Expect = 4e-34
Identities = 122/350 (34%), Positives = 165/350 (47%), Gaps = 53/350 (15%)
Query: 157 SLLWFLLKQVRPGMDLSKVVLPTFILEPRSFLDKLSDNYYHADLLGQAQTLEDPYQRFKS 216
S+L LL QV GMDL+KV LPTFILE RS L+ +D + H DL + +R +
Sbjct: 314 SVLMHLLSQVSVGMDLTKVTLPTFILERRSLLEMYADFFAHPDLFIATNGNDSAEKRMIA 373
Query: 217 VLRWYLSGLY--RKPKGLKKPYNPVLGETFRCCW-------KHRQPESYTY--------- 258
V+R+YL+ Y RK KKPYN +LGETFRC + ++ ES +
Sbjct: 374 VVRYYLNSFYAARKSGVAKKPYNAILGETFRCRYSVPNSSLSGKKTESGPWPGSDEKQLT 433
Query: 259 YVAEQVSHHPPISAFYISNRKEGYVIEGSLLARSKFYGNS--TSAILEGCARIHLLNWG- 315
++AEQVSHHPPISAFY EG + +S F G S ++I EG +H N+G
Sbjct: 434 FIAEQVSHHPPISAFYAEMPSEGISFNAHIYTKSSFLGLSIGVASIGEGILTLH--NYGD 491
Query: 316 ETYVTTAPYAHCKGIVIGTLSMELGG-------------------KSFLGGSDQTNAISG 356
E Y T P + + I + T E GG K F GG + + I G
Sbjct: 492 EQYTITFPSGYGRSI-MSTPWFEFGGKVKVECEKTGYRADIEFLTKPFFGG--KPHRIQG 548
Query: 357 RIKK--GKDTVATVEGYWDGXXXXXXXXTGEESNLLDVGFLKEQRLPRYLVRLENQQDYE 414
I + K V T+ G W+G GEE +DV E + + V + Q E
Sbjct: 549 SICRDGAKKPVLTLRGEWNG-TMYAKTQNGEEYVFVDVKAKPE--VKKECVPVMQQGKRE 605
Query: 415 SQRLWLKVSEAIQNDDQIAATEQKTVIEEAQRARARNLV---APWVPRYF 461
S+RLW V+ A+ + AT K IE+ QR A+ + W P F
Sbjct: 606 SRRLWRHVTAALLRNRIQTATTSKRFIEQRQRKEAKERLESGEKWTPLLF 655
>Z81061-1|CAB02934.3| 436|Caenorhabditis elegans Hypothetical
protein F14H8.1 protein.
Length = 436
Score = 92.7 bits (220), Expect = 7e-19
Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 166 VRP--GMDLSKVVLPTFILEPRSFLDKLSDNYYHADLLGQAQTLEDPYQRFKSVLRWYLS 223
+RP G D S+ +P F+ EP SFL +LS+N + LL +A D +R + V + L+
Sbjct: 49 IRPNLGKDFSRFTVPVFMNEPLSFLQRLSENVQYNYLLEKAAKCSDDMERIEYVAAFALA 108
Query: 224 GLYRKPKGLKKPYNPVLGETFRCCWKHRQPESYTYYVAEQVSHHPPISAFYISNRKEGYV 283
+ K L KP+NP+L ETF + ++AEQVSHHPPISA Y + + +
Sbjct: 109 TVSANHKRLSKPFNPLLLETFEL------ERNGVRFLAEQVSHHPPISAVYAES--DEFT 160
Query: 284 IEGSLLARSKFYGNSTSAILEGCARIHLLNWGETYVTTAPYAHCKGIVIGTLSMELGGKS 343
+EG++ F+ A ++ GETY +AP +++G + M
Sbjct: 161 VEGTVEPTLGFWMTKLLANPHAHLKLTFKKTGETYSWSAPKCAIYNVIMGKMYMNFTSHM 220
Query: 344 FLGGSDQTNAISGRIKKG 361
+ S +A+ KG
Sbjct: 221 KIESSGTYDAVFSFDNKG 238
>AL117202-15|CAC42376.1| 627|Caenorhabditis elegans Hypothetical
protein Y47D3A.17b protein.
Length = 627
Score = 61.7 bits (143), Expect = 1e-09
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 159 LWFLLKQVRPGMDLSKVVLPTFILEPRSFLDKLSDNYYHADLLGQAQTLEDPYQRFKSVL 218
LW ++K G +LSK+ +P EP S L +++++ +A+LL L ++ V
Sbjct: 244 LWSIMKNCI-GKELSKIPMPVNFSEPISVLQRVTEDLEYANLLETGAKLST-LEQMCYVA 301
Query: 219 RWYLSGLYRKPKGLKKPYNPVLGETFRCCWKHRQPESYTYYVAEQVSHHPPISAFYISNR 278
+ S KP+NP+LGETF R + V EQVSHHPP +A +
Sbjct: 302 AYAASNYSTTCHRTNKPFNPLLGETFEF---DRMDDLGWRSVTEQVSHHPPAAAHHAEG- 357
Query: 279 KEGYVIEGSLLARSKFYGNSTSAILEGCARI 309
G+ + S+F G S I G +
Sbjct: 358 -NGWTMYQDFTMTSRFRGKYLSVIPIGFTHV 387
>AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical
protein Y47D3A.17a protein.
Length = 766
Score = 61.7 bits (143), Expect = 1e-09
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 159 LWFLLKQVRPGMDLSKVVLPTFILEPRSFLDKLSDNYYHADLLGQAQTLEDPYQRFKSVL 218
LW ++K G +LSK+ +P EP S L +++++ +A+LL L ++ V
Sbjct: 383 LWSIMKNCI-GKELSKIPMPVNFSEPISVLQRVTEDLEYANLLETGAKLST-LEQMCYVA 440
Query: 219 RWYLSGLYRKPKGLKKPYNPVLGETFRCCWKHRQPESYTYYVAEQVSHHPPISAFYISNR 278
+ S KP+NP+LGETF R + V EQVSHHPP +A +
Sbjct: 441 AYAASNYSTTCHRTNKPFNPLLGETFEF---DRMDDLGWRSVTEQVSHHPPAAAHHAEG- 496
Query: 279 KEGYVIEGSLLARSKFYGNSTSAILEGCARI 309
G+ + S+F G S I G +
Sbjct: 497 -NGWTMYQDFTMTSRFRGKYLSVIPIGFTHV 526
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 30.7 bits (66), Expect = 3.1
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 476 QPDEVLEYEED-----FVIRTLRSGGGSPRA--GPETRHRERDLSHRASDSDSRD-ELAR 527
Q +L+YEE+ ++TL+ G S R R+ DL R + + + E+
Sbjct: 362 QEKRILKYEENEEKSLLAVKTLKDFGRSTRLEFSDSFRNIRADLVERKEEFKAHEAEVVA 421
Query: 528 RSKTSTRTLKQTLYSIDANLREQKLAIMRLSKAVDLLTE 566
K+ TRT + + N +QKL L V+ L +
Sbjct: 422 VIKSQTRTYEAYKQQMQKNAEDQKLEYSALLAKVEFLQQ 460
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1 protein.
Length = 1291
Score = 30.3 bits (65), Expect = 4.1
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 495 GGGSPRAGPETRHRE--RDLSHRA--SDSDSRDELARRSKTSTRTLKQTLYSIDANLREQ 550
G G R+G + H + H A S+ D R RRS S +Q + +ID + R Q
Sbjct: 50 GNGYTRSGRKINHNRYYEEEYHEAISSEEDERRYRTRRSSNSMTYRQQVMQAIDESKRNQ 109
Query: 551 KL 552
K+
Sbjct: 110 KV 111
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1 protein.
Length = 1291
Score = 30.3 bits (65), Expect = 4.1
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 495 GGGSPRAGPETRHRE--RDLSHRA--SDSDSRDELARRSKTSTRTLKQTLYSIDANLREQ 550
G G R+G + H + H A S+ D R RRS S +Q + +ID + R Q
Sbjct: 50 GNGYTRSGRKINHNRYYEEEYHEAISSEEDERRYRTRRSSNSMTYRQQVMQAIDESKRNQ 109
Query: 551 KL 552
K+
Sbjct: 110 KV 111
>U28742-2|AAA68332.2| 925|Caenorhabditis elegans Adaptin, alpha
chain (clathrinassociated complex) protein 2 protein.
Length = 925
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 412 DYESQRLWLKVSEAIQNDDQIAATEQKTVIEEAQR 446
DY S+ +W +V + + N + + KTV E QR
Sbjct: 454 DYVSEEVWYRVIQIVVNREDVQGYAAKTVFEALQR 488
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 30.3 bits (65), Expect = 4.1
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 495 GGGSPRAGPETRHRE--RDLSHRA--SDSDSRDELARRSKTSTRTLKQTLYSIDANLREQ 550
G G R+G + H + H A S+ D R RRS S +Q + +ID + R Q
Sbjct: 50 GNGYTRSGRKINHNRYYEEEYHEAISSEEDERRYRTRRSSNSMTYRQQVMQAIDESKRNQ 109
Query: 551 KL 552
K+
Sbjct: 110 KV 111
>U53141-3|AAA96105.3| 596|Caenorhabditis elegans Hypothetical
protein C14C11.3 protein.
Length = 596
Score = 29.9 bits (64), Expect = 5.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 191 LSDNYYHADLLGQAQTLEDPYQRFKSVLRWYLSGLY 226
+S N+YH ++L Q L Y R +S LR + LY
Sbjct: 516 ISQNWYHREMLPFVQQLVGQYDRVESDLRASMKDLY 551
>Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 29.5 bits (63), Expect = 7.2
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 463 RATQGTVPDGSPWQPDEVLEYEEDFVIRTLRSGGGSPRAGPETRHRERDLSHRASDSDSR 522
R T P + P L +E VIR +R G P E + E + + S+
Sbjct: 667 RVAASTGPRSASKSPKGTLRVKETKVIREVRQEDGKPPEISE-KKEETVKEEKVNLSERL 725
Query: 523 DELARRSKTSTRTLKQTLYSID 544
+R S +T TLK+T D
Sbjct: 726 RARSRASSPATPTLKRTFNQTD 747
>Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 29.5 bits (63), Expect = 7.2
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 463 RATQGTVPDGSPWQPDEVLEYEEDFVIRTLRSGGGSPRAGPETRHRERDLSHRASDSDSR 522
R T P + P L +E VIR +R G P E + E + + S+
Sbjct: 667 RVAASTGPRSASKSPKGTLRVKETKVIREVRQEDGKPPEISE-KKEETVKEEKVNLSERL 725
Query: 523 DELARRSKTSTRTLKQTLYSID 544
+R S +T TLK+T D
Sbjct: 726 RARSRASSPATPTLKRTFNQTD 747
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 29.5 bits (63), Expect = 7.2
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Query: 395 LKEQRLPRYLVRLENQQDYES--QRLWLKVSEAIQNDDQIAATE--QKTVIEEAQ----- 445
L+EQ+ P+ +E + + E+ + + ++ ++ D + TE + +V +
Sbjct: 62 LEEQQFPKVCANIEEENELEADTEEDIAETADDEESKDPVEKTENFEPSVTMDTYDFPDP 121
Query: 446 ---RARARNLVAPWVPRYFHRATQGTVPDGSPWQPDEVLEYEEDFVIRTLRSGGG 497
+ RAR V P P R + + + + WQ DE+LE E + S GG
Sbjct: 122 YPVQIRARPQVPPKPPIDTVRYSMNNIKESADWQLDELLEELEALETQLNSSNGG 176
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 509 ERDLSHRASDSDSRDELARRSKTSTRTLKQTLYSIDANLREQKLAIMR 556
ERDLS +D + EL R+++ T L + S++ +RE++ + R
Sbjct: 425 ERDLSSSKADVSDKGELIRQTEMKTSQLIGRVDSLETTVREKEQELDR 472
>AC006831-1|AAF39995.1| 558|Caenorhabditis elegans Hypothetical
protein ZK121.2 protein.
Length = 558
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 212 QRFKSVLRWYLSGLYRKPKGLKKPYNPVLGETFRCCWKHRQPESYTYYVAEQVSHHPPIS 271
Q++ +R Y+ YR+P+G++ Y P + + PE Q P +S
Sbjct: 452 QQYARPIR-YMPQDYRRPQGVQYMYGPPPPQQYMQYQPMVHPEVEVIVDPVQTQPFPQVS 510
Query: 272 AFYISNRKEGY 282
F + ++++GY
Sbjct: 511 HFVLPDQQQGY 521
>Z70750-4|CAA94739.2| 187|Caenorhabditis elegans Hypothetical
protein C50F4.4 protein.
Length = 187
Score = 29.1 bits (62), Expect = 9.5
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 58 YAMCPEKEADVFCDRGQFLEYPDGLVYCVVFRHESELAGVGSDTDSEGSRGGMPEPVHED 117
YA+ + +++VF D Q YPD +V ++ + SE ++ + S G+P + D
Sbjct: 69 YAIYFQPKSEVFIDTLQENGYPDAVVKGILEAYTSETFSQLFESLASCSHSGIPRVLSTD 128
Query: 118 PTAR 121
T+R
Sbjct: 129 WTSR 132
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.135 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,644,019
Number of Sequences: 27539
Number of extensions: 618454
Number of successful extensions: 1634
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1601
Number of HSP's gapped (non-prelim): 31
length of query: 610
length of database: 12,573,161
effective HSP length: 86
effective length of query: 524
effective length of database: 10,204,807
effective search space: 5347318868
effective search space used: 5347318868
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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