GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001810-TA|BGIBMGA001810-PA|IPR001849|Pleckstrin-like,
IPR000648|Oxysterol-binding protein
         (478 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.6  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   6.2  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   6.2  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   8.2  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 13/70 (18%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 411 DDEFQRNGDDVS-RFNSTPEKYSLIDYVNSPS-ANLEMVTNEKRYDRLIAQNVYVAGKIV 468
           +D+++  G  +S RF    E+   +  ++ P    +  +  +  +   I ++  +AG+++
Sbjct: 36  NDKYKPLGVSLSNRFKQDAEETVPVKKISIPPLGEILELERDANFSLFIPKHRRIAGRLI 95

Query: 469 NTVIDMRNIN 478
           +  + MRN++
Sbjct: 96  DIFLGMRNVD 105


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 108 RGPHNETIGAVIQPLPTAHLIFRAPSQAAGHCWLDGLEL 146
           +G +++   +V  P PT+ +    PS   GH     L L
Sbjct: 300 QGVNDDAFNSVATPTPTSVMTELYPSPVPGHSTSPNLPL 338


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 154 MLRCSRSRPEETVASEAP 171
           M+RC +SRP   +A   P
Sbjct: 254 MIRCLKSRPARQIALTVP 271


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 117 AVIQPLPTAHLIFRAPSQAAGHCWLD 142
           +++  LPT  L      Q+   CW+D
Sbjct: 172 SILFSLPTVFLFEEKQVQSMPQCWID 197


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.130    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,351
Number of Sequences: 317
Number of extensions: 4158
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 4
length of query: 478
length of database: 114,650
effective HSP length: 59
effective length of query: 419
effective length of database: 95,947
effective search space: 40201793
effective search space used: 40201793
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)