Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001810-TA|BGIBMGA001810-PA|IPR001849|Pleckstrin-like,
IPR000648|Oxysterol-binding protein
(478 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical pr... 161 1e-39
Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical pr... 161 1e-39
Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical pr... 161 1e-39
Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical p... 36 0.063
Z81461-9|CAB62796.1| 597|Caenorhabditis elegans Hypothetical pr... 35 0.11
AF348169-1|AAK37547.1| 597|Caenorhabditis elegans IKB-1 protein. 35 0.11
Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical pr... 33 0.58
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 30 3.1
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 30 3.1
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 30 3.1
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 30 3.1
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 30 3.1
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 30 3.1
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 30 4.1
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 30 4.1
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 29 7.2
U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like ... 29 7.2
AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to SU... 29 7.2
U61948-4|AAB03146.1| 316|Caenorhabditis elegans Hypothetical pr... 29 9.5
>Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 161 bits (390), Expect = 1e-39
Identities = 68/120 (56%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
Query: 36 TGRVRGSLKSWTKLWCVLKPGLLLLYKSPKAKSSHWVGTVLLTSCQVIERPSKKDGFCFK 95
T ++RG+LK W + +CVLKPGLL+LYK KA WVGTVLL C++IERPSKKDGFCFK
Sbjct: 45 TLKIRGALKRWNRYYCVLKPGLLILYKHKKADRGDWVGTVLLNHCELIERPSKKDGFCFK 104
Query: 96 LYHPLEQSIWAPRGPHNETIGA-VIQPLPTAHLIFRAPSQAAGHCWLDGLELALRCSNAM 154
L+HP++ SIW RGP ++ G+ + PL T+ LI RAPS AG CW+D LEL+ +C+ +
Sbjct: 105 LFHPMDMSIWGNRGPLGQSFGSFTLNPLNTSFLICRAPSDQAGRCWMDALELSFKCTGLL 164
>Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 161 bits (390), Expect = 1e-39
Identities = 68/120 (56%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
Query: 36 TGRVRGSLKSWTKLWCVLKPGLLLLYKSPKAKSSHWVGTVLLTSCQVIERPSKKDGFCFK 95
T ++RG+LK W + +CVLKPGLL+LYK KA WVGTVLL C++IERPSKKDGFCFK
Sbjct: 45 TLKIRGALKRWNRYYCVLKPGLLILYKHKKADRGDWVGTVLLNHCELIERPSKKDGFCFK 104
Query: 96 LYHPLEQSIWAPRGPHNETIGA-VIQPLPTAHLIFRAPSQAAGHCWLDGLELALRCSNAM 154
L+HP++ SIW RGP ++ G+ + PL T+ LI RAPS AG CW+D LEL+ +C+ +
Sbjct: 105 LFHPMDMSIWGNRGPLGQSFGSFTLNPLNTSFLICRAPSDQAGRCWMDALELSFKCTGLL 164
>Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical
protein ZK1086.1b protein.
Length = 770
Score = 161 bits (390), Expect = 1e-39
Identities = 68/120 (56%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
Query: 36 TGRVRGSLKSWTKLWCVLKPGLLLLYKSPKAKSSHWVGTVLLTSCQVIERPSKKDGFCFK 95
T ++RG+LK W + +CVLKPGLL+LYK KA WVGTVLL C++IERPSKKDGFCFK
Sbjct: 82 TLKIRGALKRWNRYYCVLKPGLLILYKHKKADRGDWVGTVLLNHCELIERPSKKDGFCFK 141
Query: 96 LYHPLEQSIWAPRGPHNETIGA-VIQPLPTAHLIFRAPSQAAGHCWLDGLELALRCSNAM 154
L+HP++ SIW RGP ++ G+ + PL T+ LI RAPS AG CW+D LEL+ +C+ +
Sbjct: 142 LFHPMDMSIWGNRGPLGQSFGSFTLNPLNTSFLICRAPSDQAGRCWMDALELSFKCTGLL 201
>Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical
protein Y49E10.19 protein.
Length = 1159
Score = 35.9 bits (79), Expect = 0.063
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 38 RVRGSLKSWTKLWCVLKPGLLLLYKSPKAKSSH-WVGTVLLTSCQVIERPSKKDGFCFKL 96
R L SWT+ WC L+ G + +K P+ + + + + L++C E S + C
Sbjct: 1041 RTGEGLGSWTRYWCALENGEMKFWKQPEDEGTKGYTALMDLSTCCRSEGASVVEDIC-PF 1099
Query: 97 YHPLEQSIWAPR 108
+ +WAP+
Sbjct: 1100 PNSFHIDVWAPK 1111
>Z81461-9|CAB62796.1| 597|Caenorhabditis elegans Hypothetical
protein C04F12.3 protein.
Length = 597
Score = 35.1 bits (77), Expect = 0.11
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 309 DITKSNSGRDVKMSPSLDDGLLKLVTSSR----KRRSSTPGNMLRLNRSPVFRRSGARTD 364
D + NS + + ++ S D + ++ R K+ + N L ++RSP+F RS
Sbjct: 375 DPNRQNS-KGICLADSEDSVIQNIINGDRPELPKKEAFGVPNDLAISRSPLFGRSHPDQA 433
Query: 365 SENEDVPKKLLSDKRSEILCDTPDNILITRTAPSVERFARCCSSTSDDEFQ 415
E +++ R EIL D L+ T R +R +S S+DE Q
Sbjct: 434 PGEESGRHRVVKRSREEILNDA--QTLLAETDSMAPRVSRISTSESEDEQQ 482
>AF348169-1|AAK37547.1| 597|Caenorhabditis elegans IKB-1 protein.
Length = 597
Score = 35.1 bits (77), Expect = 0.11
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 309 DITKSNSGRDVKMSPSLDDGLLKLVTSSR----KRRSSTPGNMLRLNRSPVFRRSGARTD 364
D + NS + + ++ S D + ++ R K+ + N L ++RSP+F RS
Sbjct: 375 DPNRQNS-KGICLADSEDSVIQNIINGDRPELPKKEAFGVPNDLAISRSPLFGRSHPDQA 433
Query: 365 SENEDVPKKLLSDKRSEILCDTPDNILITRTAPSVERFARCCSSTSDDEFQ 415
E +++ R EIL D L+ T R +R +S S+DE Q
Sbjct: 434 PGEESGRHRVVKRSREEILNDA--QTLLAETDSMAPRVSRISTSESEDEQQ 482
>Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical protein
F17C11.10 protein.
Length = 1101
Score = 32.7 bits (71), Expect = 0.58
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 288 SLASSPYR-LEALKKSPILKCFDITKSNSGRDVKMSPSLDDGLLKLVTSSRKRRSSTPGN 346
S+ S P + LE L K+P K D +K +S + S S+ D L+ ++ +++R+ P
Sbjct: 929 SMMSQPVQPLERLAKNPFAKGSDTSKIDSAASSQASLSIFD-QLESTSNDQRKRAREPET 987
Query: 347 MLRLNRSPVFRRSGARTDSENEDVPKKLLSDKRSEI 382
+ N++ + ++ D KK S K S++
Sbjct: 988 VTSTNQTVRKQAKLNFGGTQQSDEKKKKTSSKNSDL 1023
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 30.3 bits (65), Expect = 3.1
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 284 VTSKSLASSPYRLEA-LKKSPILKCFDITKSNSGRDVKMSPSLDDGLLKLVTSSRKRRSS 342
V + SSP + EA KK P+ F + + +DVK+ KL + S +
Sbjct: 692 VNKSPVKSSPIKKEAEKKKGPVASIFSSSTKKNEKDVKVESPSPIRKKKLPSDSDESDEE 751
Query: 343 TPGNMLRLNRSPVFRRSGARTDSENE 368
T N + P +RS DS+++
Sbjct: 752 TSTN----KKQPAKKRSRVAIDSDSD 773
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 44 KSWTKLWCVLKPGLLLLYKSPKAK--SSHWVGTVLLTSCQV 82
+SW KL+ VL+ L YK PK + S H + L C V
Sbjct: 2140 RSWEKLYAVLRQNELSFYKDPKHRDESVHGEPPMALPGCSV 2180
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 44 KSWTKLWCVLKPGLLLLYKSPKAK--SSHWVGTVLLTSCQV 82
+SW KL+ VL+ L YK PK + S H + L C V
Sbjct: 2185 RSWEKLYAVLRQNELSFYKDPKHRDESVHGEPPMALPGCSV 2225
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 44 KSWTKLWCVLKPGLLLLYKSPKAK--SSHWVGTVLLTSCQV 82
+SW KL+ VL+ L YK PK + S H + L C V
Sbjct: 2140 RSWEKLYAVLRQNELSFYKDPKHRDESVHGEPPMALPGCSV 2180
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 44 KSWTKLWCVLKPGLLLLYKSPKAK--SSHWVGTVLLTSCQV 82
+SW KL+ VL+ L YK PK + S H + L C V
Sbjct: 2140 RSWEKLYAVLRQNELSFYKDPKHRDESVHGEPPMALPGCSV 2180
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 44 KSWTKLWCVLKPGLLLLYKSPKAK--SSHWVGTVLLTSCQV 82
+SW KL+ VL+ L YK PK + S H + L C V
Sbjct: 2185 RSWEKLYAVLRQNELSFYKDPKHRDESVHGEPPMALPGCSV 2225
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 29.9 bits (64), Expect = 4.1
Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 4/121 (3%)
Query: 335 SSRKRRSSTPGNMLRLNRSPVFRRSGARTDSENEDVPKKLLSDKRSEILCDTPDNILITR 394
SSRKRRS + + + +P RR T + + + +D+R P N + R
Sbjct: 910 SSRKRRSDSRS---KKSATPTDRRRSRDTPTGSRSMRSTSPNDRRKSRETP-PGNRSMRR 965
Query: 395 TAPSVERFARCCSSTSDDEFQRNGDDVSRFNSTPEKYSLIDYVNSPSANLEMVTNEKRYD 454
T+PS R +R + S + TP Y I+ T E+ +
Sbjct: 966 TSPSDGRKSRDTPTASSSMSSSTLSYCKKSKETPMSYEEIEQQKKAKRQRNCKTREENRE 1025
Query: 455 R 455
R
Sbjct: 1026 R 1026
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.9 bits (64), Expect = 4.1
Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 4/121 (3%)
Query: 335 SSRKRRSSTPGNMLRLNRSPVFRRSGARTDSENEDVPKKLLSDKRSEILCDTPDNILITR 394
SSRKRRS + + + +P RR T + + + +D+R P N + R
Sbjct: 910 SSRKRRSDSRS---KKSATPTDRRRSRDTPTGSRSMRSTSPNDRRKSRETP-PGNRSMRR 965
Query: 395 TAPSVERFARCCSSTSDDEFQRNGDDVSRFNSTPEKYSLIDYVNSPSANLEMVTNEKRYD 454
T+PS R +R + S + TP Y I+ T E+ +
Sbjct: 966 TSPSDGRKSRDTPTASSSMSSSTLSYCKKSKETPMSYEEIEQQKKAKRQRNCKTREENRE 1025
Query: 455 R 455
R
Sbjct: 1026 R 1026
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 393 TRTAPSVERFARCCSSTSDDEFQRNGDDVSRFNSTPEKYSLIDYVNSPSANLEMVTN 449
T T P + +F + T+ E DD+ RF +T E+ + S N+ M T+
Sbjct: 162 TTTEPQIIKFVKTTKPTTTTEDTTTEDDIIRFTTTTERVRYATF----SPNIPMTTS 214
>U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like
protease protein 1 protein.
Length = 697
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 365 SENEDVPK--KLLSDKRS-EILCDTPDNILITRTAPSVERFARCCSSTSDDEFQRN 417
++N D P ++SD RS E + TPD+ + PS+ + S+ D ++RN
Sbjct: 199 NDNPDTPDDVSVISDSRSKEFISPTPDDSVSRPITPSLSSLSNYTSNNVRDYWRRN 254
>AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to
SUMO-1-specific protease protein.
Length = 697
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 365 SENEDVPK--KLLSDKRS-EILCDTPDNILITRTAPSVERFARCCSSTSDDEFQRN 417
++N D P ++SD RS E + TPD+ + PS+ + S+ D ++RN
Sbjct: 199 NDNPDTPDDVSVISDSRSKEFISPTPDDSVSRPITPSLSSLSNYTSNNVRDYWRRN 254
>U61948-4|AAB03146.1| 316|Caenorhabditis elegans Hypothetical
protein C46A5.6 protein.
Length = 316
Score = 28.7 bits (61), Expect = 9.5
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
Query: 309 DITKSNSGRDVKMSPSLDDG----LLKLVTSSRKRRSSTPGNMLRLNRSPVFRRSGARTD 364
D +++ D K L DG + V S++K R G +R+ + RR+ A+
Sbjct: 212 DPIENDQETDEKTKSELGDGGEIVFKEPVQSTKKTRGRKRGTSVRIEKLSTSRRTSAKKK 271
Query: 365 SENEDVPKKLLSDKRSEILCDTPDNILITRTAPS 398
E + + +DK T + R PS
Sbjct: 272 EEKQKETETFDADKNENPSTPTAPPTMTRRHTPS 305
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.130 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,154,674
Number of Sequences: 27539
Number of extensions: 464153
Number of successful extensions: 1193
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1179
Number of HSP's gapped (non-prelim): 26
length of query: 478
length of database: 12,573,161
effective HSP length: 84
effective length of query: 394
effective length of database: 10,259,885
effective search space: 4042394690
effective search space used: 4042394690
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -