Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001809-TA|BGIBMGA001809-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
(416 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.13
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 31 0.40
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa... 28 2.8
SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2 |Sc... 27 3.7
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 27 3.7
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.9
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe... 27 4.9
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 6.4
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 32.3 bits (70), Expect = 0.13
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 39 TPEETPSQMNGSPPMFKNKSNSNFE---DATSPSKDFARSASAIQVAQNNERFRKVSTPA 95
TP + S + SP +KS+S+ + ++S SK + S+S+ + + ++ K S
Sbjct: 153 TPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASP 212
Query: 96 SSRHGLQNISSRSHLPST 113
SS SS S + ST
Sbjct: 213 SSSKSSSKFSSSSFITST 230
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 30.7 bits (66), Expect = 0.40
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 55 KNKSNSNFEDATSPSKDFARSASAIQVAQNNE--RFRKVSTPASSRHGLQNISSRSHLPS 112
K+ N++ + + DF + A+ + +E +F + +SSR GL +ISSR+ S
Sbjct: 658 KSSDNTSLDGTPLQNTDFKKVATVEDDSPFDELDKFSSPFSSSSSRGGLSHISSRNVSIS 717
Query: 113 TPSLLGSV 120
P++L V
Sbjct: 718 VPTVLQDV 725
>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
Msa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 27.9 bits (59), Expect = 2.8
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 29 QDERNPKVVFTPEETPSQMNGSPPMFKNKSNSNFEDATSPSKDFARS-ASAIQVAQNNER 87
+D+ N V+ P P ++ PP +SNS + SPS FA S ++ + + NE
Sbjct: 260 KDQSNTPVIKAPAPIPFSVSSDPPSTMGRSNSAVQ---SPSY-FAHSLVNSTEFSTPNES 315
Query: 88 FRKVSTPASSRHGLQNISSRSHLPSTPS 115
+ + S L+ S ++ LP+ S
Sbjct: 316 LSSLPSILPSIPSLE--SGKAELPTDGS 341
>SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 27.5 bits (58), Expect = 3.7
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
Query: 30 DERNPKVVFTPEETPSQMNGSPPMFKNKSNSNFEDATSPSKDFARSASAIQVAQNNERFR 89
++ P + E+P+ +N + +N++ + TSP+ S +A +
Sbjct: 121 NDSRPSSISNSSESPAPINSATASMSPANNTSGNNITSPNVRGELDMSG-NIAMSGGPTN 179
Query: 90 KVSTPASSRHGL----QNISSRSHLPSTPSLLGSVPEGKASRVNS 130
ST H + Q S+ S+L S+ S LGS + NS
Sbjct: 180 TASTSGPVPHDMTVLPQTDSNTSNLMSSGSQLGSFATASTNGNNS 224
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 27.5 bits (58), Expect = 3.7
Identities = 21/76 (27%), Positives = 31/76 (40%)
Query: 39 TPEETPSQMNGSPPMFKNKSNSNFEDATSPSKDFARSASAIQVAQNNERFRKVSTPASSR 98
T E T Q S + + +++ S S A + +QN+ + +P S
Sbjct: 143 TAERTSQQAVRSAITETTNPSVSVQNSNSTSTSSAAMIIPHRDSQNSLEIAPLISPESQL 202
Query: 99 HGLQNISSRSHLPSTP 114
L SSR HL STP
Sbjct: 203 SSLHPSSSRRHLISTP 218
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 4.9
Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 9/140 (6%)
Query: 39 TPEETPSQMNGSPPMFKN--KSNSNFEDATSPSKDFARSASAIQVAQNNERFRKVSTPAS 96
+P T S ++ S + ++S ++S S F+ + S+ ++ ++ F T +S
Sbjct: 282 SPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSS-FSSSPTSSS 340
Query: 97 SRHGLQNISSRSHLPSTPSLLGSVPEGKASRVNSQEAFGKKLAIXXXXXXXXXXXXFQYM 156
S ISS S PS+ S + K+S + + +
Sbjct: 341 S-----TISSSSSSPSSSSFSSTTSSSKSSS-SFSSTVSSSSSTSSSTLTSSSSSSSRPA 394
Query: 157 STPFHGSTLSAFEKPSEFAS 176
S+ H S+LS+ + S S
Sbjct: 395 SSSSHSSSLSSHKSSSSSKS 414
Score = 26.6 bits (56), Expect = 6.4
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 37 VFTPEETPSQMNGSPPMFKNKSNSNFEDATSPSKDFARSASAIQVAQNNERFRKVSTPAS 96
+ + +PS + S +KS+S+F S S + S+S + + ++ S PAS
Sbjct: 343 ISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSS--STSSSTLTSSSSSS-----SRPAS 395
Query: 97 SRHGLQNISSRSHLPSTPSLLGSVPEGKASRVNS 130
S ++S SH S+ S S P A NS
Sbjct: 396 SSSHSSSLS--SHKSSSSSKSSSAPVSSAFYHNS 427
>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 659
Score = 27.1 bits (57), Expect = 4.9
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Query: 37 VFTPEETPSQMNGSPPMFKNKS-NSNFEDATSPSKDFARSASAIQVAQNNERFRKVSTPA 95
+F EE S P+ KN S N D S ++S S + + NE + S PA
Sbjct: 370 IFVDEEDTDVQ--SKPVRKNPSVELNSTDTLLSSTVISKSLSTVVIG--NETGKSESYPA 425
Query: 96 SSRHGLQNISSRSHLPSTPSLLGSVPEGKAS 126
+S +IS S + + + + P + S
Sbjct: 426 TSTRSFNDISPSSSSSYSTAQISTFPSNQES 456
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 6.4
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 55 KNKSNSNFEDATSPSKDFARSASAIQVAQNNERFRKVSTPASSRHGLQNISSR 107
KNKSN + + S + S Q N E+FR+ S + SR G QN S+
Sbjct: 1533 KNKSNKGRSASYTFSDPSSLEDSNRQKPFNGEKFRRFS--SKSRRGSQNRDSK 1583
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.132 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,550,303
Number of Sequences: 5004
Number of extensions: 56527
Number of successful extensions: 198
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 192
Number of HSP's gapped (non-prelim): 11
length of query: 416
length of database: 2,362,478
effective HSP length: 75
effective length of query: 341
effective length of database: 1,987,178
effective search space: 677627698
effective search space used: 677627698
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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