Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001808-TA|BGIBMGA001808-PA|IPR011701|Major facilitator
superfamily MFS_1
         (679 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    25   2.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    24   4.7  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   4.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   6.2  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   8.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   8.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   8.2  

>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 1/73 (1%)

Query: 202 LYFSFGAMVGTGAGLAFPATVYIVTSYFVRFRGLANGICMSGSAFGSIILPPVLRYLLET 261
           +Y  F  ++G  + + F A +           G+A    M        I+P V+  ++  
Sbjct: 8   IYAPFFGVMGAASAIIFSA-LGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 66

Query: 262 YGYKGAVLILGGI 274
           YG   AVLI GG+
Sbjct: 67  YGLVVAVLIAGGL 79


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 276 LNVWAAALLFQPVEEHMVRKYKEN--QEEDC 304
           L  W   L +QP+    +R+Y++N    EDC
Sbjct: 100 LQQWNEDLNWQPIATKYLRRYEDNIFLPEDC 130


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 276 LNVWAAALLFQPVEEHMVRKYKEN--QEEDC 304
           L  W   L +QP+    +R+Y++N    EDC
Sbjct: 115 LQQWNEDLNWQPIATKYLRRYEDNIFLPEDC 145


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 389 HGSQETFSRRQSNAGPIRNYSTSSLAYISTPFHGSTLSAF 428
           H + E+F +   N   +RN   +   +I  P  GS    F
Sbjct: 363 HTASESFMKHYENEMRLRNGCPADWLWIVPPISGSATPVF 402


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 54  PDDDTPAVGAGRFTIGPAPERDW 76
           P   T  +G+G + IG + E DW
Sbjct: 376 PGXYTMVIGSGVYRIGSSVEFDW 398


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 159 YSSLGPLSSILSVRWSYRTVTLIGGSFAAFGM 190
           + S+  +  + S  WSY +     GS+  +G+
Sbjct: 124 FQSIALVDVVKSANWSYVSTVYSEGSYGEYGI 155


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 159 YSSLGPLSSILSVRWSYRTVTLIGGSFAAFGM 190
           + S+  +  + S  WSY +     GS+  +G+
Sbjct: 214 FQSIALVDVVKSANWSYVSTVYSEGSYGEYGI 245


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.137    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,357
Number of Sequences: 429
Number of extensions: 6725
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 9
length of query: 679
length of database: 140,377
effective HSP length: 62
effective length of query: 617
effective length of database: 113,779
effective search space: 70201643
effective search space used: 70201643
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)