Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001806-TA|BGIBMGA001806-PA|IPR000086|NUDIX hydrolase
(227 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001403-1|AAH01403.1| 227|Homo sapiens nudix (nucleoside dipho... 373 e-103
AJ001810-1|CAA05026.1| 227|Homo sapiens pre-mRNA cleavage facto... 373 e-103
BX537360-1|CAD97606.1| 227|Homo sapiens hypothetical protein pr... 371 e-102
CR456919-1|CAG33200.1| 227|Homo sapiens CPSF5 protein. 370 e-102
D29642-1|BAA06125.2| 666|Homo sapiens KIAA0053 protein. 31 2.5
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 31 2.5
AC097495-2|AAY15074.1| 558|Homo sapiens unknown protein. 31 2.5
>BC001403-1|AAH01403.1| 227|Homo sapiens nudix (nucleoside
diphosphate linked moiety X)-type motif 21 protein.
Length = 227
Score = 373 bits (917), Expect = e-103
Identities = 169/196 (86%), Positives = 183/196 (93%)
Query: 31 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 90
LTL R+INLYPLTNYTFGTKEPL+EKD+SV ARFQRMREEF KIGMRR+VEGVL+VHEH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 91 LPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWWR 150
LPHVLLLQLGT FFKLPGGELNPGEDE++GLKRL+TE LGRQDGV Q+W+I+D IGNWWR
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150
Query: 151 PNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDNAQGYGP 210
PNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPLFELYDNA GYGP
Sbjct: 151 PNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGP 210
Query: 211 IISSLSQSLCRFNFIY 226
IISSL Q L RFNFIY
Sbjct: 211 IISSLPQLLSRFNFIY 226
>AJ001810-1|CAA05026.1| 227|Homo sapiens pre-mRNA cleavage factor I
25 kDa subunit protein.
Length = 227
Score = 373 bits (917), Expect = e-103
Identities = 169/196 (86%), Positives = 183/196 (93%)
Query: 31 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 90
LTL R+INLYPLTNYTFGTKEPL+EKD+SV ARFQRMREEF KIGMRR+VEGVL+VHEH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 91 LPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWWR 150
LPHVLLLQLGT FFKLPGGELNPGEDE++GLKRL+TE LGRQDGV Q+W+I+D IGNWWR
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150
Query: 151 PNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDNAQGYGP 210
PNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPLFELYDNA GYGP
Sbjct: 151 PNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGP 210
Query: 211 IISSLSQSLCRFNFIY 226
IISSL Q L RFNFIY
Sbjct: 211 IISSLPQLLSRFNFIY 226
>BX537360-1|CAD97606.1| 227|Homo sapiens hypothetical protein
protein.
Length = 227
Score = 371 bits (913), Expect = e-102
Identities = 168/196 (85%), Positives = 183/196 (93%)
Query: 31 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 90
LTL R+INLYPLTNYTFGTKEPL+EKD+SV ARFQRMREEF KIGMRR+VEGVL+VHEH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 91 LPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWWR 150
LPHVLLLQLGT FFKLPGGEL+PGEDE++GLKRL+TE LGRQDGV Q+W+I+D IGNWWR
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELDPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150
Query: 151 PNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDNAQGYGP 210
PNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPLFELYDNA GYGP
Sbjct: 151 PNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGP 210
Query: 211 IISSLSQSLCRFNFIY 226
IISSL Q L RFNFIY
Sbjct: 211 IISSLPQPLSRFNFIY 226
>CR456919-1|CAG33200.1| 227|Homo sapiens CPSF5 protein.
Length = 227
Score = 370 bits (910), Expect = e-102
Identities = 168/196 (85%), Positives = 182/196 (92%)
Query: 31 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 90
LTL R+INLYPLTNYTFGTKEPL+EK +SV ARFQRMREEF KIGMRR+VEGVL+VHEH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKGSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 91 LPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWWR 150
LPHVLLLQLGT FFKLPGGELNPGEDE++GLKRL+TE LGRQDGV Q+W+I+D IGNWWR
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150
Query: 151 PNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDNAQGYGP 210
PNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPLFELYDNA GYGP
Sbjct: 151 PNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGP 210
Query: 211 IISSLSQSLCRFNFIY 226
IISSL Q L RFNFIY
Sbjct: 211 IISSLPQLLSRFNFIY 226
>D29642-1|BAA06125.2| 666|Homo sapiens KIAA0053 protein.
Length = 666
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 109 GELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWWRPNFE 154
G+ N GE+EID L+R++ E R++ Q+ + E+ I N + N++
Sbjct: 562 GKKNSGEEEIDSLQRMVQEL--RKEIETQKQMYEEQIKNLEKENYD 605
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 31.5 bits (68), Expect = 2.5
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 143 DTIGNWWRPNFEPPQYPYIPPHITKPKEH 171
D IG++ +P PQ P +PPH+ +P EH
Sbjct: 818 DPIGHFTQPILHLPQ-PELPPHLPQPPEH 845
>AC097495-2|AAY15074.1| 558|Homo sapiens unknown protein.
Length = 558
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 109 GELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWWRPNFE 154
G+ N GE+EID L+R++ E R++ Q+ + E+ I N + N++
Sbjct: 454 GKKNSGEEEIDSLQRMVQEL--RKEIETQKQMYEEQIKNLEKENYD 497
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.140 0.439
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,832,172
Number of Sequences: 224733
Number of extensions: 1722422
Number of successful extensions: 3889
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3884
Number of HSP's gapped (non-prelim): 8
length of query: 227
length of database: 73,234,838
effective HSP length: 87
effective length of query: 140
effective length of database: 53,683,067
effective search space: 7515629380
effective search space used: 7515629380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
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