Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001805-TA|BGIBMGA001805-PA|undefined
(343 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20698| Best HMM Match : Keratin_B2 (HMM E-Value=0.16) 83 2e-16
SB_49200| Best HMM Match : GatB (HMM E-Value=6.4) 45 8e-05
SB_24918| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_19076| Best HMM Match : HECT (HMM E-Value=0) 31 1.8
SB_225| Best HMM Match : DSPc (HMM E-Value=8.6e-05) 30 3.1
SB_31531| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22) 29 4.2
SB_38369| Best HMM Match : E-MAP-115 (HMM E-Value=1.7) 29 4.2
SB_31228| Best HMM Match : EMP24_GP25L (HMM E-Value=0.22) 29 4.2
SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 29 7.3
SB_33458| Best HMM Match : HEAT (HMM E-Value=7.9e-15) 29 7.3
SB_58629| Best HMM Match : Homeobox (HMM E-Value=0.05) 28 9.6
>SB_20698| Best HMM Match : Keratin_B2 (HMM E-Value=0.16)
Length = 376
Score = 83.4 bits (197), Expect = 2e-16
Identities = 37/72 (51%), Positives = 46/72 (63%)
Query: 187 VQLADLKLDKHATDKFKRLVGDRYDPKTDLVTITADRCPTKVQNLDYVNYLLTACYHESW 246
V L DL LD HA K LVG+RY+P D +TI DRCPT+ QN DY YL+T Y+E+W
Sbjct: 1 VFLKDLILDDHARTKLIELVGERYNPVDDSLTIVTDRCPTRQQNNDYALYLMTVLYNEAW 60
Query: 247 NFEDWEKEKTED 258
E WE E + +
Sbjct: 61 KIEPWETEASNE 72
>SB_49200| Best HMM Match : GatB (HMM E-Value=6.4)
Length = 151
Score = 45.2 bits (102), Expect = 8e-05
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 133 SQCEALKQFCTEWPNLLNSEESIEKHY-PLEIISSDYCH--ASPSIRNPLARVVILRVQL 189
S+ +K T+WP++ + ++ P+ + H + +A + +++V L
Sbjct: 43 SRAVTMKPESTDWPSVFSGPQTYNPAIIPVFLRMGRRKHNRLDNFPQRTMANLELMKVFL 102
Query: 190 ADLKLDKHATDKFKRLVGDRYDPKTDLVTITADR 223
DL LD HA K LVG+RY+P D +TI DR
Sbjct: 103 KDLILDDHARTKLIELVGERYNPVDDSLTIITDR 136
Score = 39.5 bits (88), Expect = 0.004
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 42 FRVLDILKKRDKMQRRVVKRTDVQPDRIDRMATNQ-NWGNVWPGPKTFHPSSVPLPIRQG 100
F L + R++ Q+RV P R M +W +V+ GP+T++P+ +P+ +R G
Sbjct: 18 FMHLQFAEFRNEHQKRVHGAMQRNPSRAVTMKPESTDWPSVFSGPQTYNPAIIPVFLRMG 77
Query: 101 YVPKGQA---PPGKKANAELMKI 120
+ P AN ELMK+
Sbjct: 78 RRKHNRLDNFPQRTMANLELMKV 100
>SB_24918| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 260 MEYYDWDNNASKRSLIDWYLRVKNELKIMNDEEYKAFDISQIENGAQY 307
+++ W ++SK L++W+L K+ + N E++ DIS N +Y
Sbjct: 4 LKFGSWSLDSSKIRLVNWHLNGKSTSYVKNG-EWELLDISSTRNTVEY 50
>SB_19076| Best HMM Match : HECT (HMM E-Value=0)
Length = 2018
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 244 ESWNFEDWEKEKTEDDMEYYDWDNN-ASKRSLIDWYLR 280
ES ED E+E+ EDD E +D D+N + ++++W +R
Sbjct: 1002 ESSTGED-EEEEEEDDAEMHDRDDNDGGQENMVEWAIR 1038
>SB_225| Best HMM Match : DSPc (HMM E-Value=8.6e-05)
Length = 881
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 200 DKFKRLVGDRYDPKTDLVTITADRCPTKVQNLDYVNYLLTACYHESWNF 248
++F + D P T+ VT++++ P V V L ACY E NF
Sbjct: 448 EEFNEFLED--SPVTEKVTVSSENSPAMVAGAGAVRTGLYACYREHSNF 494
>SB_31531| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 34 KKGEEEEEFRVLDILKKRDKMQRRVVKRTDVQPDRIDRMATNQNWGNV 81
++GE E +L K+ + Q ++++RTD Q D ++++ + V
Sbjct: 126 RRGERERTTNKAKLLLKKKRYQEQLLQRTDNQLDNLEKLVQEIEFAQV 173
>SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22)
Length = 266
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 243 HESWNFEDWEKEKTEDDMEYYDWDNNASKR-SLIDWYLRVKNELKIMNDEEYKAFDISQI 301
HE W E + E++E + + WD ++ SLID + ++LK D + Q+
Sbjct: 42 HEEWLIEYIQNEESEKEDKLARWDEAKNRSLSLIDECRKKLDKLKKSRDPTTSEEVVKQM 101
Query: 302 ENGAQYKASVSKYMNE 317
+ A VS E
Sbjct: 102 VKAQECSAEVSAIFPE 117
>SB_38369| Best HMM Match : E-MAP-115 (HMM E-Value=1.7)
Length = 412
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 83 PGPKTFHPSSVPLPIRQGYVPKGQAP--PGK 111
PG P PLP+ Q ++P GQ P PG+
Sbjct: 212 PGQTPMLPGQTPLPLGQTFMPLGQVPMLPGQ 242
>SB_31228| Best HMM Match : EMP24_GP25L (HMM E-Value=0.22)
Length = 350
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 23 RLNSTSADSALKKGEEEEEFRVLDILKKRDKMQRRVVKRTDVQPDRID 70
RL + + A +K EEEE R+ +I ++++KM ++ + ++D
Sbjct: 105 RLRIQAEEEARRKAEEEERIRIEEIKRQQEKMLQQQQQHPVAATQQVD 152
>SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 244 ESWNFEDWEKEKTEDDMEYYDWDNNASKRSLIDWYLRVKNELKIMNDEEYK 294
++WN E KE+ DD +YD D I++ RV ++N ++++
Sbjct: 679 DAWNAEFERKERCVDDTVHYDHDLEQHWWRTIEFLTRVGQAGIVLNPDKFQ 729
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 28.7 bits (61), Expect = 7.3
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 220 TADRCPTKVQNLDYVNYLLTACYHESWNFEDWEKEKTEDDMEYYDWDNNASKRSLIDWYL 279
TA+ ++ D V L E D K + E + Y+ D R + D YL
Sbjct: 733 TAENLRKDLEGRDEVIKQLRPKVKELLEENDSLKVELESLKQSYE-DLEEQYRVVEDKYL 791
Query: 280 RVKNELKIMNDE-EYKAFDISQIE 302
+ ELK++N+E + KAF+ Q E
Sbjct: 792 SAQKELKVLNEEGDNKAFEQLQTE 815
>SB_33458| Best HMM Match : HEAT (HMM E-Value=7.9e-15)
Length = 875
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 9 KSGCFNSACNVKLWRLNSTSADSALKKGEEE---EEFRVLDILKKRDKMQRRV 58
+ C N+ C + +WR++ + A++ L + E FR+L L K +R +
Sbjct: 642 EGACDNNTCCIPMWRISFSLAEATLIRSLNEVHKNSFRILKALINSAKEKRLI 694
>SB_58629| Best HMM Match : Homeobox (HMM E-Value=0.05)
Length = 466
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 305 AQYKASVSKYMNEGENPQTVQEYSIAVRKLFGLP 338
A KA V +Y+NEG + Q+ ++ A+ G+P
Sbjct: 194 ASIKAHVRRYINEGNDVQSAEDLKDAILSNGGIP 227
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,480,431
Number of Sequences: 59808
Number of extensions: 556226
Number of successful extensions: 1421
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1410
Number of HSP's gapped (non-prelim): 15
length of query: 343
length of database: 16,821,457
effective HSP length: 83
effective length of query: 260
effective length of database: 11,857,393
effective search space: 3082922180
effective search space used: 3082922180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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