Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001805-TA|BGIBMGA001805-PA|undefined
(343 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-35|CAB61063.1| 365|Caenorhabditis elegans Hypothetical... 204 5e-53
Z75547-10|CAA99905.4| 394|Caenorhabditis elegans Hypothetical p... 31 1.2
U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein. 31 1.6
U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF067220-9|AAC16977.1| 305|Caenorhabditis elegans Hypothetical ... 30 2.7
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 29 3.6
AF143151-1|AAD37917.1| 163|Caenorhabditis elegans heat shock pr... 29 3.6
Z99283-1|CAB16536.2| 414|Caenorhabditis elegans Hypothetical pr... 29 4.8
U50307-2|AAA92303.1| 558|Caenorhabditis elegans Serine palmitoy... 29 4.8
U50307-1|AAK71365.1| 586|Caenorhabditis elegans Serine palmitoy... 29 4.8
>AL132948-35|CAB61063.1| 365|Caenorhabditis elegans Hypothetical
protein Y39B6A.39 protein.
Length = 365
Score = 204 bits (499), Expect = 5e-53
Identities = 112/286 (39%), Positives = 162/286 (56%), Gaps = 8/286 (2%)
Query: 58 VVKRTDVQPDRIDRMATN-QNWGNVWPGPKTFHPSSVPLPIRQGYVP--KGQAPPGKKAN 114
++ R +P R + M Q W +VWP +TF S VPLP+R G P + +AP K+ N
Sbjct: 84 LMDRLTKRPPRSEEMDPEAQKWCDVWPAARTFASSVVPLPVRMGTRPNVEKRAPFKKEGN 143
Query: 115 AELMKIPNFLHLTPPVIKSQCEALKQFCTEWP-NLLNSEESIEKHYPLEIISSDYCHASP 173
EL+KIPNFLHLTPP I+ C+A+K+FCT +P LL++ + +H P+ I S Y H
Sbjct: 144 LELVKIPNFLHLTPPAIQQHCQAIKKFCTPFPPELLSNPSATCQHLPISIEYSTYIHQGT 203
Query: 174 SIRNPLARVVILRVQLADLKLDKHATDKFKRLVGDRYDPKTDLVTITADRCPTKVQNLDY 233
SIR+ +RVV +++ +A+LKL ++ +K RL +RYD KT +TI DRC T+ QNLDY
Sbjct: 204 SIRDIRSRVVTMKIHVAELKLSENQMEKLIRLAANRYDEKTGKMTIITDRCHTRQQNLDY 263
Query: 234 VNYLLTACYHESWNFEDWEKEKTEDDMEYYDWDNNASKRSLIDWYLRVKNELKIMNDEEY 293
+YLLT YHE+ E W++ K D ++D + +K LID + K +
Sbjct: 264 AHYLLTVLYHEAQKVEKWDELKNRTDALKVEFDGSNTKTKLIDLLEKAKLTPGLSPSAAG 323
Query: 294 KAFDISQIENGAQYKASVSKYMNEGENPQTVQEYSIAVRKLFGLPQ 339
S E G +KA Y N E + +EY ++KL G+ Q
Sbjct: 324 CGDQKSIDEFGEMWKA----YRNSEETVEKTREYGRQMKKLLGIQQ 365
>Z75547-10|CAA99905.4| 394|Caenorhabditis elegans Hypothetical
protein R11D1.10 protein.
Length = 394
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 254 EKTEDDMEYYDWDNNASKRSLIDWYLRVKNELKIMNDEEYKAFDISQIENGAQYKASVSK 313
EK E++ME+ DWD ++R ++ + K N E+ + S + ++ + +
Sbjct: 209 EKKEEEMEHKDWDELEARRR------KIFEDEKEKNREDDASIRESMVSANTEFSEATKE 262
Query: 314 YMNEGENPQTVQEYSIAVRK 333
MNE N E +A K
Sbjct: 263 EMNEINNILQDAEQRVAETK 282
>U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein.
Length = 1404
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 131 IKSQCEALKQFCTEWPNL--LNSEE---SIEKHYPLEIISSDYCHASPSIRN 177
++S C + FC + PNL +NS+ SI +HYPL ++ H+ + ++
Sbjct: 496 LRSICAPYRPFCGQCPNLQIVNSDHHFLSIPRHYPLYLVGLFDLHSGQTCQS 547
>U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical
protein F35H10.10 protein.
Length = 1404
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 131 IKSQCEALKQFCTEWPNL--LNSEE---SIEKHYPLEIISSDYCHASPSIRN 177
++S C + FC + PNL +NS+ SI +HYPL ++ H+ + ++
Sbjct: 496 LRSICAPYRPFCGQCPNLQIVNSDHHFLSIPRHYPLYLVGLFDLHSGQTCQS 547
>AF067220-9|AAC16977.1| 305|Caenorhabditis elegans Hypothetical
protein C33E10.2 protein.
Length = 305
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 215 DLVTITADRCPTKVQNLDYVNYLLTACYHESWNFEDWEKEK 255
D++TI + P +Q +DY + L HE + E W++ K
Sbjct: 167 DVITIISTLKPGFLQKIDYASLLQHERSHEVFELEQWKQAK 207
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 244 ESWNFEDWEKEKTEDDMEYYDWDNNASKRSLIDWYLRVKNELKI 287
E W E+ EK T+D + D+ +N K+ L+DW +++
Sbjct: 514 EKWAQEEAEKTGTDDKKDTKDFRDN-EKKELLDWMKETLGSVRV 556
>AF143151-1|AAD37917.1| 163|Caenorhabditis elegans heat shock
protein 75 protein.
Length = 163
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 244 ESWNFEDWEKEKTEDDMEYYDWDNNASKRSLIDWYLRVKNELKI 287
E W E+ EK T+D + D+ +N K+ L+DW +++
Sbjct: 5 EKWAQEEAEKTGTDDKKDTKDFRDN-EKKELLDWMKETLGSVRV 47
>Z99283-1|CAB16536.2| 414|Caenorhabditis elegans Hypothetical
protein Y70C5C.2 protein.
Length = 414
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 218 TITADRCPTKVQNLDYVNYLLT--ACYHESWNFEDWEKEKTEDDMEYYDWDNNAS 270
TIT+ P N+ NYLLT Y+ F + + D + YD D+ S
Sbjct: 311 TITSPNFPMNYNNITSCNYLLTTLGSYNVMLKFNKFYTDMKNDFVTLYDGDSTKS 365
>U50307-2|AAA92303.1| 558|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 2, isoform a protein.
Length = 558
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 48 LKKRDKMQRRVVKRTDVQPDRIDRMATNQNWGNVWPGPKT 87
+K RD +R + D +DR++ + NW +PG +T
Sbjct: 134 IKVRDVFERPICSVPGATVDLVDRVSHDGNWTYEYPGTRT 173
>U50307-1|AAK71365.1| 586|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 2, isoform b protein.
Length = 586
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 48 LKKRDKMQRRVVKRTDVQPDRIDRMATNQNWGNVWPGPKT 87
+K RD +R + D +DR++ + NW +PG +T
Sbjct: 162 IKVRDVFERPICSVPGATVDLVDRVSHDGNWTYEYPGTRT 201
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,325,592
Number of Sequences: 27539
Number of extensions: 433161
Number of successful extensions: 1397
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1387
Number of HSP's gapped (non-prelim): 12
length of query: 343
length of database: 12,573,161
effective HSP length: 82
effective length of query: 261
effective length of database: 10,314,963
effective search space: 2692205343
effective search space used: 2692205343
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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