Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001804-TA|BGIBMGA001804-PA|IPR007087|Zinc finger,
C2H2-type
(1396 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 64 1e-10
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 51 1e-06
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 45 9e-05
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 43 3e-04
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 41 0.001
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 40 0.002
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 39 0.004
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 36 0.030
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 36 0.030
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 36 0.040
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 35 0.070
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 35 0.070
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 34 0.16
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 34 0.16
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 34 0.16
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 33 0.28
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 33 0.28
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 33 0.37
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 32 0.65
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 31 0.86
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 31 0.86
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 31 1.1
SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Sch... 31 1.1
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 1.1
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 30 2.0
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 30 2.0
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 30 2.0
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 30 2.6
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 30 2.6
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 30 2.6
SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr... 29 4.6
SPBC1773.12 |||transcription factor |Schizosaccharomyces pombe|c... 29 4.6
SPBC28E12.01c |apc13|SPBC9B6.12c|anaphase-promoting complex subu... 29 4.6
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 29 4.6
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 4.6
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 29 4.6
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 29 4.6
SPAC13G6.08 |||Cdc20/Fizzy family WD repeat protein|Schizosaccha... 29 6.0
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 29 6.0
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 29 6.0
SPBC11C11.04c |alp1||tubulin specific chaperone cofactor D |Schi... 29 6.0
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 29 6.0
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 28 8.0
SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosa... 28 8.0
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 28 8.0
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 28 8.0
SPBC660.13c |ssb1|rpa1, rad11|DNA replication factor A subunit S... 28 8.0
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 64.1 bits (149), Expect = 1e-10
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 1194 CSEAFDKASSYKSHLREHASLPIYTCEL--CDRVFSDSSNFTKHKKVH-NLQNYRCEI-- 1248
C + + + S + HLR H++ + C+ C + F S+ HK+ H N++ + C
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDG 89
Query: 1249 CNKKFQTLPYLEKHMEIH-KEKPIKCP---CCPVMSYTPSLNRRHIRMHHVKGTKTLCPI 1304
C+ +F T +LE+H+E+H K KP C C S L R HI H C
Sbjct: 90 CDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQL-RSHISACHTHLLPYPCTY 148
Query: 1305 --CSERFHTLKMKWDHLWQVH-KLRKEKWDCNLC--GSSYRKFKDLKDHYKDVH 1353
C RF T + +H+ + H K+ C + K+ L++H ++ H
Sbjct: 149 QDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAH 202
Score = 45.2 bits (102), Expect = 7e-05
Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 19/194 (9%)
Query: 1192 QICSEAFDKASSYKSHL-REHASLPIYTC--ELC--DRVFSDSSNFTKHKKVHNLQNYRC 1246
Q C F ++H+ R H + Y+C E C F S H + ++ + C
Sbjct: 149 QDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAHVPS--C 206
Query: 1247 EICNKKFQTLPYLEKHMEIH-----KEKPIKCPC--CPVMSYTPSLNRRHIRMHHVKGTK 1299
IC ++F+T +L H+ +H + K CP C S ++HI + H
Sbjct: 207 SICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMA 266
Query: 1300 TLCPICSERFHTLKMKWDHLWQVHKLRKEKWDCNLCGSSYRKFKDLKDHYKDVHRKKYLK 1359
C C +F M HL + + K N CG + + + +H +K +
Sbjct: 267 FHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYINECGIKHDGIEGVA-----IHDQKEKE 321
Query: 1360 LMSGNKKDKIKKLL 1373
L S D KK++
Sbjct: 322 LSSNLVSDVAKKII 335
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 11/132 (8%)
Query: 1228 DSSNFTKHKKVHNLQNYRCEICNKKFQTLPYLEKHMEIH-KEKPIKCPC--CPVMSYTPS 1284
+S N KK+ + E C KK+ LE+H+ H E+P C C Y S
Sbjct: 12 ESKNLRSAKKIFHCPY---EECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKS 68
Query: 1285 LNRRHIRMH-HVKGTKTLCPICSERFHTLKMKWDHLWQVHKLRKEKWDCNL--CGSSYRK 1341
+ H R H +VK C +F+T + H+ +VH+ + + + C C + K
Sbjct: 69 HLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHI-EVHR-KPKPYACTWEGCDECFSK 126
Query: 1342 FKDLKDHYKDVH 1353
+ L+ H H
Sbjct: 127 HQQLRSHISACH 138
Score = 35.9 bits (79), Expect = 0.040
Identities = 60/263 (22%), Positives = 98/263 (37%), Gaps = 27/263 (10%)
Query: 116 CDKAWWDLDPFREHLRKHKTDYIVNFEDLGYESNIVAYLSKELRPPFKNIRTQGKCLKCD 175
C K + +HLR H + + G A+ K K T K C
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSK---AFYRKSHLKIHKRCHTNVKPFSCH 86
Query: 176 RR-CENHFFKANYSP--IIPDKGDYPYFCL--KCTEKFPTCAARRVHEQTQHGKP-QFPC 229
C+ F+ + I + PY C C E F R H H +PC
Sbjct: 87 YDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPC 146
Query: 230 LY--CKLSFSSKRILEDHLQRHTVRSDRPSTIPTKLCA--ECNLRYAVFKTHPCPKKWFR 285
Y C+L F++K+ L++H+ R + S P + C E +++ + H +
Sbjct: 147 TYQDCELRFATKQKLQNHVNRAHEKIISYS-CPHESCVGHEGFEKWSQLQNH-IREAHVP 204
Query: 286 WCNQCYRQFDMKGAQEIHGLFSKTNVS------CNI--CSQKFFSECSLVDHY-LTHTNN 336
C+ C RQF H + +T + C + C + F +L H + H N
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264
Query: 337 FTLQYLCTRCGV-FIHKDLRKQH 358
+ + C CG F +K + ++H
Sbjct: 265 --MAFHCDSCGTKFGYKHMLQRH 285
Score = 31.9 bits (69), Expect = 0.65
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 12/104 (11%)
Query: 1151 CVVCKRTFNRQSDVKRHLVEHLLKDAQVNGERSFFNWSLRCQICSEAFDKASSYKSHLRE 1210
C +C R F + ++ H+V H ER ++ + + C ++F ++S+ K H+
Sbjct: 206 CSICGRQFKTAAHLRHHVVLH----QTTLEERKTYHCPM--EGCKKSFTRSSALKKHISV 259
Query: 1211 -HASLPIYTCELCDRVFSDSSNFTKHKKVHNLQNYRCEICNKKF 1253
H + C+ C F KH +L+ C+ +K +
Sbjct: 260 IHEGNMAFHCDSCGTKFG-----YKHMLQRHLERGTCKKAHKPY 298
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 204 CTEKFPTCAARRVHEQTQH-GKPQFPCLYCKLSFSSKRILEDHLQRHTVR 252
C + F +A + H H G F C C F K +L+ HL+R T +
Sbjct: 243 CKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCK 292
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 50.8 bits (116), Expect = 1e-06
Identities = 18/70 (25%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1194 CSEAFDKASSYKSHLREHASLPIYTCELCDRVFSDSSNFTKHKKVH-NLQNYRCEICNKK 1252
C++ F +A + KSH+ H + + C +C + F+ + +H+++H ++ + C CN++
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 1253 FQTLPYLEKH 1262
F + L +H
Sbjct: 637 FARMDALNRH 646
Score = 36.3 bits (80), Expect = 0.030
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 1199 DKASSYKSHLREHASLPIYTCEL--CDRVFSDSSNFTKHKKVH-NLQNYRCEICNKKFQT 1255
+ +SS K+ E S Y C C++ F+ + N H H N + ++C IC K F
Sbjct: 553 ENSSSSKAK-SESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFAR 611
Query: 1256 LPYLEKHMEIHKE-KPIKCPCC 1276
+H ++H K C C
Sbjct: 612 QHDKRRHEQLHTGIKAFACVTC 633
Score = 35.1 bits (77), Expect = 0.070
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 12/90 (13%)
Query: 1154 CKRTFNRQSDVKRHLVEHLLKDAQVNGERSFFNWSLRCQICSEAFDKASSYKSHLREHAS 1213
C + F R ++K H+ H R F +C IC ++F + + H + H
Sbjct: 577 CNKRFTRAYNLKSHMNTH-------TNYRPF-----QCSICKKSFARQHDKRRHEQLHTG 624
Query: 1214 LPIYTCELCDRVFSDSSNFTKHKKVHNLQN 1243
+ + C C++ F+ +H K QN
Sbjct: 625 IKAFACVTCNQRFARMDALNRHYKSEVGQN 654
Score = 33.5 bits (73), Expect = 0.21
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 7/79 (8%)
Query: 194 KGDYPYFCLKCTEKFPTCAARRVHEQTQHGKPQFPCLYCKLSFSSKRILEDHLQRHTVRS 253
+G+Y C ++F + H T F C CK SF+ + H Q HT
Sbjct: 567 QGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHT--- 623
Query: 254 DRPSTIPTKLCAECNLRYA 272
I C CN R+A
Sbjct: 624 ----GIKAFACVTCNQRFA 638
Score = 33.1 bits (72), Expect = 0.28
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Query: 166 RTQGKCLKCDRRCENHFFKA-NYSPIIPDKGDY-PYFCLKCTEKFPTCAARRVHEQTQHG 223
++QG + C F +A N + +Y P+ C C + F +R HEQ G
Sbjct: 565 KSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTG 624
Query: 224 KPQFPCLYCKLSFSSKRILEDH 245
F C+ C F+ L H
Sbjct: 625 IKAFACVTCNQRFARMDALNRH 646
Score = 32.3 bits (70), Expect = 0.49
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 1009 PHLCTKCDKEYDSLYKYLEHLTCHD-LKANTCPQCLKTFERTTKLMWHFKIHINQTFLK 1066
P C+ C K + + H H +KA C C + F R L H+K + Q L+
Sbjct: 599 PFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEVGQNCLR 657
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 307 SKTNVSCNI--CSQKFFSECSLVDHYLTHTNNFTLQYLCTRCGVFIHKDLRKQHKKQFHN 364
S+ N C C+++F +L H THTN Q C+ C K +QH K+ H
Sbjct: 566 SQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQ--CSIC----KKSFARQHDKRRHE 619
Query: 365 R 365
+
Sbjct: 620 Q 620
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 44.8 bits (101), Expect = 9e-05
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 1194 CSEAFDKASSYKSHLREHASLPIYTCELCDRVFSDSSNFTKHKKVH-NLQNYRCEICNKK 1252
C++ + + +SH++ H S Y C+LC F + +H ++H N + Y CE C K+
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 1253 FQTLPYLEKHME 1264
F L L +H +
Sbjct: 509 FNRLDALNRHKQ 520
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 1222 CDRVFSDSSNFTKHKKVH-NLQNYRCEICNKKFQTLPYLEKHMEIHKE-KPIKCPCCPVM 1279
C++ + N H + H + + YRC++C F L++H+ IH+ +P C C
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCECLKRF 509
Query: 1280 SYTPSLNRRHIR 1291
+ +LNR R
Sbjct: 510 NRLDALNRHKQR 521
Score = 35.1 bits (77), Expect = 0.070
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 15/97 (15%)
Query: 1143 PKFKRQKICVV--CKRTFNRQSDVKRHLVEHLLKDAQVNGERSFFNWSLRCQICSEAFDK 1200
P+ + +C+ C + R+ +V+ H+ HL +R + RC +C F +
Sbjct: 437 PEADGKYVCLYNGCNKRIARKYNVESHIQTHL-------SDRPY-----RCDLCKAGFVR 484
Query: 1201 ASSYKSHLREHASLPIYTCELCDRVFSDSSNFTKHKK 1237
K HLR H + Y CE C + F+ +HK+
Sbjct: 485 HHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRHKQ 520
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 1217 YTCELCDRVFSDSSNFTKHKKVHNLQNYRCEICNKKFQTLPYLEKHMEIH-KEKPIKCPC 1275
+ E V S T+ + + + + C+ C K+F L +H H K +PI CP
Sbjct: 4 HVSENSTNVLSAKRKLTEPSLIDSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPY 63
Query: 1276 CPVMSYTPSLNRRHIRMHH 1294
C + L +RHI+ H
Sbjct: 64 CEIKCKRKDLLKRHIQRFH 82
Score = 35.5 bits (78), Expect = 0.053
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 1216 IYTCELCDRVFSDSSNFTKHKKVHN-LQNYRCEICNKKFQTLPYLEKHME-IHKEKPI 1271
++ C+ C + F+ N T+HK H+ + C C K + L++H++ H +K +
Sbjct: 30 VFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKSV 87
Score = 32.3 bits (70), Expect = 0.49
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 190 IIPDKGDYPYFCLKCTEKFPTCAARRVHEQTQHGKPQFPCLYCKLSFSSKRILEDHLQR 248
+I K +P C +C ++F H+ PC YC++ K +L+ H+QR
Sbjct: 24 LIDSKRVFP--CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQR 80
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 307 SKTNVSCNICSQKFFSECSLVDHYLTHTNNFTLQYLCTRCGVFI-HKDLRKQHKKQFHN 364
SK C+ C+++F +L H H+ + C C + KDL K+H ++FHN
Sbjct: 27 SKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIP--CPYCEIKCKRKDLLKRHIQRFHN 83
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuclear
cluster type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 1186 NWSLRCQICSEAFDKASSYKSHLREHASLPIYTCEL--CDRVFSDSSNFTKHKKVHNL 1241
N RC C + F + SS K H H + C+ C + F+ SN +H+++H L
Sbjct: 465 NVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIHGL 522
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 199 YFCLKCTEKFPTCAARRVHEQTQHGKPQFPCLY--CKLSFSSKRILEDHLQRH 249
Y C +C + F ++ ++H + G+ F C Y C +F+ + + H + H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 1190 RCQICSEAFDKASSYKSHLREHASLPIYTCEL--CDRVFSDSSNFTKHKKVHNLQNYR 1245
+C +C++AF + H+R H + C C + FS S T+H ++H N R
Sbjct: 27 KCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSR 84
Score = 35.9 bits (79), Expect = 0.040
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 1009 PHLCTKCDKEYDSLYKYLEHLTCHD-LKANTC--PQCLKTFERTTKLMWHFKIHIN 1061
P+ C C K + L H+ H K + C P C K F R+ +L H +IH N
Sbjct: 25 PYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 1244 YRCEICNKKFQTLPYLEKHMEIHK-EKPIKCP---CCPVMSYTPSLNRRHIRMH 1293
Y+C +C K F L + +H+ H EKP C C S + L RH R+H
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELT-RHARIH 78
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 102 TRYSDVPQFYKCYMCDKAWWDLDPFREHLRKH 133
T+ D P+ YKC +C KA++ L+ H+R H
Sbjct: 17 TKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTH 48
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 1217 YTCELCDRVFSDSSNFTKHKKVHNLQN-YRCEI--CNKKFQTLPYLEKHMEIH 1266
Y C LC + F + T+H + H + + C C K+F L +H IH
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 1269 KPIKCPCCPVMSYTPSLNRRHIRMHHVKGTKT-LC--PICSERF 1309
+P KCP C Y RHIR H G K +C P C++RF
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTH--TGEKPHVCTFPGCAKRF 65
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 198 PYFCLKCTEKFPTCAARRVHEQTQHGKPQFPCLY--CKLSFSSKRILEDHLQRHTVRSDR 255
PY C CT+ F + H +T G+ C + C FS L H + HT + R
Sbjct: 25 PYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSR 84
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 39.1 bits (87), Expect = 0.004
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 1188 SLRCQICSEAFDKASSYKSHL----------REHASLPIYTCEL-CDRVFS-DSSNFTKH 1235
S C C+ AF+ A S K H R+ ASLP + E+ ++ S N
Sbjct: 4 SFACTTCTVAFNNAESQKIHWKSDWHHYNLKRKVASLPPLSAEVFAGKILSIQKQNEEVQ 63
Query: 1236 KKVHNLQNYRCEICNKKFQTLPYLEKHMEIHKEK 1269
KK QN CE+CNKKF + HM K +
Sbjct: 64 KKAEFYQN--CEVCNKKFYSEGAYSSHMASKKHR 95
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 1191 CQICSEAFDKASSYKSHLREHASLPIYTCELCDRVFSDSSNFTKHKKVHNLQNYRCEICN 1250
C C+ +F + K H++ AS +Y E + + + S F + ++ + C CN
Sbjct: 210 CLFCAASFSSFDTCKKHMK--ASHSLYIPER-EYLVDEPSLFDYLAEKISI-GFTCLTCN 265
Query: 1251 KKFQTLPYLEKHME 1264
++F++L + HM+
Sbjct: 266 REFKSLEAVRAHMQ 279
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 36.3 bits (80), Expect = 0.030
Identities = 29/137 (21%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 819 DRVFNNTYYFAKHKKKHDLEKENS-IKQLYEKQTEANPSAGRQVLESEPELNIKPEMPFE 877
D+ F T ++ + + +K I +LYE + E + S+ ++ E
Sbjct: 56 DKDFKTTASVDRYGRPLNQDKATKEIDRLYELENEGSSSSSESSEITDNEEVASASSKST 115
Query: 878 VIDEFEDDANVNDDMATPQRDEGMSVESSISDVD--KIKIEATTSIQDIKKEIVEEDLQV 935
+E D+ + ++++ P R EG+ S SD + + EA I ++ EE++
Sbjct: 116 KSEELTDEESEDEEVYDPARGEGIISTSESSDESDAESETEAQPEISELAGIEPEENIPR 175
Query: 936 EMDYNEFSVVKLEYEDL 952
+ N +VV +++++L
Sbjct: 176 GSETNRLAVVNMDWDNL 192
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 36.3 bits (80), Expect = 0.030
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 1194 CSEAFDKASSYKSHLREHASLPIYTCELCDRVFSDSSNFTKHKKVHNLQ 1242
C ++F + + H R H ++ ++C C+R F+ S +H + +LQ
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQ 81
Score = 35.9 bits (79), Expect = 0.040
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 195 GDYPYFCL--KCTEKFPTCAARRVHEQTQHGKPQFPCLYCKLSFSSKRILEDHLQRHTVR 252
GD ++C C + F R HE+T F C +C +F+ +L H+Q+ ++
Sbjct: 22 GDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQ 81
Query: 253 SDRPSTIPTKLCAECNLRYAV 273
S L A C L + V
Sbjct: 82 KQNLSE-RRMLNASCFLGFCV 101
Score = 34.7 bits (76), Expect = 0.092
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 1222 CDRVFSDSSNFTKHKKVH-NLQNYRCEICNKKFQTLPYLEKHM-EIHKEK 1269
C + F+ + +H++ H N++ + C CN+ F L +H+ ++H +K
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQK 82
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 803 HLREHASLPVHTCDVCDRVFNNTYYFAKHKKKHDLEKEN 841
H R H ++ +C C+R F + +H ++ L+K+N
Sbjct: 46 HERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQN 84
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 35.9 bits (79), Expect = 0.040
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 1242 QNYRCEICNKKFQTLPYLEKHM-EIH-KEKPIKCPCCPVMSYTPSLNRRHIRMHHVKGTK 1299
+++ C C+KKF+ +L +H+ +H EKP C C S +L R+H R+H +
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCICGKRFSRRDNL-RQHERLHVNASPR 479
Query: 1300 TLC 1302
C
Sbjct: 480 LAC 482
Score = 35.5 bits (78), Expect = 0.053
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 1188 SLRCQICSEAFDKASSYKSHLRE-HASLPIYTCELCDRVFSDSSNFTKHKKVH 1239
S C CS+ F ++ + H+R H S + C +C + FS N +H+++H
Sbjct: 422 SFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLH 473
Score = 33.9 bits (74), Expect = 0.16
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 13/79 (16%)
Query: 992 KRKRHETRGRKPAVQIEP----HLCTKCDKEYDSLYKYLEHLTCHDLKANTCPQ-----C 1042
+RKR + RK +V P +C +C K++ K EHL H +T + C
Sbjct: 401 RRKRRQPSNRKTSVPRSPGGKSFVCPECSKKF----KRSEHLRRHIRSLHTSEKPFVCIC 456
Query: 1043 LKTFERTTKLMWHFKIHIN 1061
K F R L H ++H+N
Sbjct: 457 GKRFSRRDNLRQHERLHVN 475
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 195 GDYPYFCLKCTEKFPTCAARRVHEQTQH-GKPQFPCLYCKLSFSSKRILEDHLQRHTVRS 253
G + C +C++KF R H ++ H + F C+ C FS + L H + H S
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLHVNAS 477
Query: 254 DR 255
R
Sbjct: 478 PR 479
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 1297 GTKTLCPICSERFHTLKMKWDHLWQVHKLRKEKWDCNLCGSSYRKFKDLKDH 1348
G +CP CS++F + H+ +H K + C +CG + + +L+ H
Sbjct: 420 GKSFVCPECSKKFKRSEHLRRHIRSLHTSEK-PFVC-ICGKRFSRRDNLRQH 469
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 35.1 bits (77), Expect = 0.070
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 491 LMKTRSTEQNTTEQNKELELVLEKNNQITNEPGTFNIEILNVNNGTDSFEIQLKY--DSE 548
L K TE++ +E+N+E++ + EK ++ N+ + + T E QLK+ + E
Sbjct: 390 LEKFEQTERDISEKNEEVKSLREKAAKVKNDCTSEKKTRQSYEQQTVKIEEQLKFLLNKE 449
Query: 549 SSLKQSQREKSV--SHIEHNISSDEFASDSSNDE 580
LK+S S S E+++SS + S N E
Sbjct: 450 KKLKKSIEALSFEKSEAENSLSSHDIDSQKLNSE 483
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 35.1 bits (77), Expect = 0.070
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Query: 456 TESEPEQEINVKTEINTEPEECEDDXXXXXXXXXSLMKTRS--TEQNTTEQNKELELVLE 513
+ES E + + ++E E +D S ++ S ++ +++ + E E E
Sbjct: 173 SESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSE 232
Query: 514 KNNQITNEPGTFNIEILNVNNGTDSFEIQLKYDSESSLKQSQREKSVSHIEHNISSDEFA 573
N+ ++ + E + + +DS +SESS K S + S S D+ +
Sbjct: 233 DNDSSSSSSDS---ESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSD-----SEDDSS 284
Query: 574 SDSSNDEGTECTENGDVIS 592
SDSS+ E +E+ D S
Sbjct: 285 SDSSDSESESSSEDSDSTS 303
Score = 33.9 bits (74), Expect = 0.16
Identities = 33/183 (18%), Positives = 66/183 (36%), Gaps = 5/183 (2%)
Query: 407 PPPRVSKQQELKAALDGLKQDMYEHLSQYANTSQXXXXXXXXXXXCIDLTESEPEQEINV 466
PP + E A+ G D + S + +S + SE +
Sbjct: 92 PPEKAHSSSE--ASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSS 149
Query: 467 KTEINTEPEECEDDXXXXXXXXXSLMKTRSTEQNTTEQNKELELVLEKNNQITNEPGTFN 526
++ +E D S + + +++ + E E E ++ ++ +
Sbjct: 150 SSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDS-- 207
Query: 527 IEILNVNNGTDSFEIQLKYDSESSLKQSQREKSVSHIEHNISSDEFASDSSNDEGTECTE 586
E + + G+DS +SESS + + S S E SS++ S SS+ + +
Sbjct: 208 -ESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESS 266
Query: 587 NGD 589
+ D
Sbjct: 267 SKD 269
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 1217 YTCELCDRVFSDSSNFTKHKKVHNLQN-YRCEI--CNKKFQTLPYLEKHMEIHKEKPIKC 1273
Y C C RVF + +H + H + + C C K+F L +H+ H K +
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKALVT 63
Query: 1274 P 1274
P
Sbjct: 64 P 64
Score = 32.7 bits (71), Expect = 0.37
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 1241 LQNYRCEICNKKFQTLPYLEKHMEIHK-EKPIKC--PCCPVMSYTPSLNRRHIRMHHVKG 1297
+++Y C C + F + +H+ H EKP +C P C RH+R H K
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKA 60
Query: 1298 TKT 1300
T
Sbjct: 61 LVT 63
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 10/70 (14%)
Query: 1151 CVVCKRTFNRQSDVKRHLVEHLLKDAQVNGERSFFNWSLRCQICSEAFDKASSYKSHLRE 1210
C CKR F+RQ RH+ H GE+ F C + F + H+R
Sbjct: 6 CPFCKRVFHRQEHQVRHIRSH-------TGEKPF---ECSYPSCKKRFTRRDELIRHVRT 55
Query: 1211 HASLPIYTCE 1220
H + T E
Sbjct: 56 HLRKALVTPE 65
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 1188 SLRCQICSEAFDKASSYKSHLREHASLPIYTCEL--CDRVFSDSSNFTKHKKVH 1239
S C C F + H+R H + C C + F+ +H + H
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 194 KGDYPYFC--LKCTEKFPTCAARRVHEQTQHGKPQFPCLYCKLSFSSKRILEDHL-QRHT 250
+GD Y C CT+ F R H ++ F C +C SF+ +L H+ Q+H
Sbjct: 12 EGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHV 71
Query: 251 VRSDRPS 257
++D S
Sbjct: 72 KQNDAGS 78
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 7/71 (9%)
Query: 1233 TKHKKVHNLQN----YRCEI--CNKKFQTLPYLEKHMEIH-KEKPIKCPCCPVMSYTPSL 1285
TK KK Q Y+C+ C K F + +H H K CP C +
Sbjct: 2 TKAKKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDV 61
Query: 1286 NRRHIRMHHVK 1296
RH+ HVK
Sbjct: 62 LNRHVNQKHVK 72
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 1192 QICSEAFDKASSYKSHLREHASLPIYTCELCDRVFSDSSNFTKH-KKVHNLQN 1243
Q C+++F + + H R H + + C C F+ S +H + H QN
Sbjct: 22 QGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQN 74
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1241 LQNYRCEICNKKFQTLPYLEKHMEIH-KEKPIKC 1273
++ Y CE C + F L +L++H+ H EKP C
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 1191 CQICSEAFDKASSYKSHLREHASLPIYTC-EL------CDRVFSDSSNFTKH-KKVH 1239
C+ C+ AF + K H+R H + +TC E+ C R FS +H +K+H
Sbjct: 72 CETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIH 128
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 1143 PKFKRQKICVVCKRTFNRQSDVKRHLVEH 1171
P+ +Q +C C R F R +KRH+ H
Sbjct: 64 PQKVKQYVCETCTRAFARLEHLKRHIRSH 92
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 1313 KMKWDHLWQVHKLRKEKWDCNLCGSSYRKFKDLKDHYKDVHRKKYLKLMSGNKKD--KIK 1370
++ WD+ +V + ++ C C S++ KDL H K+ H + ++ N D
Sbjct: 41 EVDWDNEEEVWEDEVHEFCCLFCDSTFTCLKDLWSHCKEAHNFDFYQVKQQNNLDFYACI 100
Query: 1371 KLLLQANVTVKSEPAEESNEMVDII 1395
KL+ VK + +++ DI+
Sbjct: 101 KLVNYIRSQVKEGKTPDLDKLSDIL 125
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 33.1 bits (72), Expect = 0.28
Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 8/177 (4%)
Query: 406 PPPPRVSKQQELKAALDGLKQDMYEHLSQYA--NTSQXXXXXXXXXXXCIDLTESEPEQE 463
P V KQ++ K + + E S + ++S+ + + SE E+E
Sbjct: 66 PSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEE 125
Query: 464 INVKTEINTEPEECEDDXXXXXXXXXSLMKTRSTEQNTTEQNKELELVLEKNNQITNEPG 523
+ VKTE E +++K ++++++ + E E ++ ++
Sbjct: 126 VIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSE-SSSSESESESSSSES 184
Query: 524 TFNIEILNVNNGTDSFEIQLKYDSESSLKQSQREKSVSHIEHNISSDEFASDSSNDE 580
E++ + DSESS S + + SSD + SS DE
Sbjct: 185 EEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESG-----DSDSSSDSESESSSEDE 236
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 32.7 bits (71), Expect = 0.37
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Query: 863 ESEPELNIKPEMPFEVIDEFEDDANVNDDMATPQRD--EGMSVESSISDVDKIKIEATTS 920
E E E ++ FE DEF++DA ++DD T +R SV + V ++
Sbjct: 11 EEEFENDLLDASEFE--DEFDEDAEIDDDGFTVERKRRRAHSVSYRVVSVRDLRASLNEK 68
Query: 921 IQDIKKEIVEEDLQVEMDYNEFSVVKLEYEDLIERKENSPSE 962
I + I DL E + K E L+ER ++P E
Sbjct: 69 INQLTSII---DLTREQVLGLYRYFKWNRERLLERYIDAPEE 107
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
Query: 871 KPEMPFEVIDEFEDDANVNDDMA---TPQRDEGMSVESSISDVDKIKIEATTSIQDIKKE 927
KP+ E+IDE E++ +++ D++ T D+ + E+SI D+++ T DI+K+
Sbjct: 872 KPDKVTELIDEAEENIDISQDISMTETNAVDDEVQAENSILQ-DEVE---ETRQDDIEKD 927
Query: 928 IVEEDLQVEMDYN 940
+E+ +V+ D N
Sbjct: 928 ELEDIKEVKEDEN 940
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 31.5 bits (68), Expect = 0.86
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 602 CVCTKCNTRYDTLESYLSHFTSHNYQSNTC 631
C +C T++D +E + HF Y+ TC
Sbjct: 21 CFTCQCGTQFDNVERIVQHFKECRYRDETC 50
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 31.5 bits (68), Expect = 0.86
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 602 CVCTKCNTRYDTLESYLSHFTSHNYQSNTC 631
C +C T++D +E + HF Y+ TC
Sbjct: 21 CFTCQCGTQFDNVERIVQHFKECRYRDETC 50
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/94 (24%), Positives = 41/94 (43%)
Query: 838 EKENSIKQLYEKQTEANPSAGRQVLESEPELNIKPEMPFEVIDEFEDDANVNDDMATPQR 897
E E+S ++ +++E + V SE + E E E+D+ V+D+ +
Sbjct: 52 ESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEEDSEVSDESESESE 111
Query: 898 DEGMSVESSISDVDKIKIEATTSIQDIKKEIVEE 931
E S E S S+ + + E + +KK EE
Sbjct: 112 SESESEEESESEEESDESERSGPSSFLKKPEKEE 145
>SPBC577.05c |rec27|mug41|meiotic recombination protein
Rec27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 134
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 902 SVESSISDVDKIKIEATTSIQDIKKEIVEEDLQVEMDYNEFSVVKL-EYEDLIERK 956
++E + D+I+ E T+I++ KK +++ QV+ EF + K + + L E K
Sbjct: 38 NIERRVKKYDQIESEYKTNIENEKKAFIKDVSQVQQKIKEFEIQKANQIKQLNEEK 93
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.1 bits (67), Expect = 1.1
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 17/132 (12%)
Query: 842 SIKQLYEKQTEANPSAGRQVLESEPELNIKPEMPFEV------IDEFEDDANVN------ 889
S KQ YEK+ E A R L +E E K E+ ++ I E E+ A N
Sbjct: 1579 STKQYYEKEKETEILAARSELVAEKE-KTKEELENQLNEKSQRIKELEEQAQKNSSENTH 1637
Query: 890 ---DDMATPQRDEGMSVESSISDVDKIKIEATTSIQDIKKEIVEEDLQVEMDYNEFSVVK 946
DDM Q +E + S+ DV K+ A T + K V E ++ N+ + ++
Sbjct: 1638 DNIDDMIKQQVEEKLKENSANFDVKLKKVVAETEFRSKAKISVYEKKTRDLQ-NKITQLE 1696
Query: 947 LEYEDLIERKEN 958
E+L ++ N
Sbjct: 1697 ETIENLNKQLSN 1708
>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 436
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 833 KKHDLEKENSIKQLYEKQTEANPSAGRQVLESEPELNIKPEMPFEVIDEFEDDANVNDDM 892
KK + +EN Q Y K T+ P AG++ + EP+ N + + F D DD
Sbjct: 178 KKLETVQENP--QAYSKVTQQEPQAGQKAVPQEPQANQQETSSNQEESSF-DRQETQDDK 234
Query: 893 ATPQ 896
P+
Sbjct: 235 QKPK 238
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 1221 LCDRVFSDSSNFTKHKKVHNLQNYRCEICNKKFQTLPYLEKHMEIHKEK 1269
+ D+ + S + + K++ N C +CNK F++ LE H K K
Sbjct: 247 IIDQEETSSDDESLSKEIVNSNPIMCMVCNKNFRSQNQLENHENSKKHK 295
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 1072 TEEKAGKIFRCRHCKKIVTKDDFFEHWERHYALMDWKSQKKMDVVIVNTDK 1122
TE A + + C C++ +T + EH + H AL + ++ ++V + DK
Sbjct: 530 TENSADETYTCEECEQKITLSERNEHEDYHIALSISRKERYNNLVPPSHDK 580
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/74 (22%), Positives = 34/74 (45%)
Query: 841 NSIKQLYEKQTEANPSAGRQVLESEPELNIKPEMPFEVIDEFEDDANVNDDMATPQRDEG 900
N +++L EK+ ++ + + E NI+ E E E +++ + +EG
Sbjct: 19 NKMRELLEKEHLRMTQQNAEIEKEDEEYNIEEEEEAERDIEISSESSDEEAELKKLEEEG 78
Query: 901 MSVESSISDVDKIK 914
VE + D ++IK
Sbjct: 79 EEVEKILRDEERIK 92
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 29.9 bits (64), Expect = 2.6
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 837 LEKENSIKQLYEKQTEANPSAGRQVLESEPELNIKPEMPFEVIDEFEDDANVNDDMATPQ 896
LEK N Q +K+ N S + +PE+NI+PE P D E +++ + Q
Sbjct: 2194 LEKYNLENQ--KKEILENESKEEET--RQPEVNIQPEEPINTSD-MEGVTTEANEIGSYQ 2248
Query: 897 RDEGMSVESSISDVDKIKIEATTSI---QDIKKEIVEEDLQ 934
+++ DV + I+ T + +++++E+V + +Q
Sbjct: 2249 EPSLINIRGREVDVSSLGIDPTFLLALPEEMREEVVFQHIQ 2289
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 29.9 bits (64), Expect = 2.6
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 491 LMKTRSTEQNTTEQNKELELVLEKNNQITNE------PGTFNIEILNVNNGTDSFEIQL- 543
L ST+ N E+ + + ++LE NN+ NE G +++LN + S EI L
Sbjct: 102 LQNFESTDFNK-EKERLVSIILESNNKSNNELITKNGYGNTRLDLLNQLSEYISPEILLP 160
Query: 544 KYDSESSLKQSQREKSVSHIEHNISSD-EFASDSSND 579
K E L+Q++ + S + HN+ + F SD D
Sbjct: 161 KRRLEHLLQQAKDYQVSSQVYHNVLKNFSFLSDYKAD 197
>SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 131
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Query: 598 VKQPC-VCTKCNTRYDTLESYLSHFTSHNYQSNTCPQCL 635
+K C VC KC T ++ H SH+Y+ P CL
Sbjct: 9 LKSRCYVCAKCKTHL----AFKGHLLSHDYRGKNGPACL 43
>SPBC1773.12 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 594
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 241 ILEDHLQRHTVRSDRPSTIPTKLCAECNLRYAVFKTHPCPKKWFRWCNQCYRQFDMKGAQ 300
I + H + +T+ P + PT + N+ + C + +FR+ N C+ FD++
Sbjct: 145 IFQIHPKDYTMNDLFPQSFPTWISVYRNVPEKAWANR-CVEWYFRYINSCWPLFDLENFM 203
Query: 301 EIHGLF 306
++ F
Sbjct: 204 DLFDNF 209
>SPBC28E12.01c |apc13|SPBC9B6.12c|anaphase-promoting complex subunit
Apc13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 135
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 497 TEQNTTEQNKELELVLEKNNQITNEPGTFNIEILNVNN 534
TE T Q+ L+L KN Q+ +EP ++E+ ++ N
Sbjct: 43 TEDEMTIQHSSANLILMKNKQLRHEPAWKDLELEDLVN 80
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 552 KQSQREKSVSHIEHNISSDEFASDSSNDEGTECTENGDVI---------SVNKYRVKQPC 602
++ E S+SH+ N +SD +SD S+ E E TEN + + + C
Sbjct: 155 RKEHNELSLSHLSFNDTSDFGSSDLSSSE-IESTENDNKAPYFSLLYSDGFDFIKFLHVC 213
Query: 603 VCTKCNTR 610
VC KC+ R
Sbjct: 214 VCVKCHGR 221
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.1 bits (62), Expect = 4.6
Identities = 26/128 (20%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Query: 473 EPEECEDDXXXXXXXXXSLMKTRSTEQNTTEQNKELELVLEKNNQITNEPGTFNIEILNV 532
+PE+ E D K++ + N E + + V E+ + + +P N +
Sbjct: 60 KPEDDEVDEEVVPVKKKPSKKSKKAKANAFEAFADEQSVEEEEEEDSEKPVRKNKKSSKK 119
Query: 533 NNGTDSFEIQLKYDSESSLKQSQREKSVSHIEHNISSDEFASDSSNDEGTECTENGDVIS 592
+ ++F+ + SL + + E S S + S D+G+E ++GD+ S
Sbjct: 120 ASPKNAFDALADDMDDLSLDEEESESSEK------SKKKKKKSKSKDDGSEALDDGDIES 173
Query: 593 VNKYRVKQ 600
K + K+
Sbjct: 174 SEKDKKKK 181
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 105 SDVPQFYKCYMCDKAWWDLDPFREHLRKHKTDY 137
S VP+F + Y DK+ D+DP R L K + +
Sbjct: 744 SQVPKFEEGYSLDKSSHDIDPERAQLNKLRAQH 776
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 29.1 bits (62), Expect = 4.6
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 496 STEQNTTEQNKELELVLEKNNQITNEPGTFNIEILNVNNGTDSFEIQLKYDSESSLKQSQ 555
S+EQ+ T + EL+ VL+ N T + + +VNN S L +SE +L
Sbjct: 32 SSEQDKTPSDYELDDVLDLYNDTTEDDAD---DADDVNNYIMSPSSSLSSESEHALDALV 88
Query: 556 REKSVSH--IEHNISSDEFASDSSNDEG-TECT--ENGDVISVNKYRVK 599
H +EH +SD + SN T C +N V S N+Y K
Sbjct: 89 YPIYSHHNILEHENNSDYASITPSNHPAFTSCAYLQNPVVDSNNEYESK 137
>SPAC13G6.08 |||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 535
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/48 (25%), Positives = 27/48 (56%)
Query: 908 SDVDKIKIEATTSIQDIKKEIVEEDLQVEMDYNEFSVVKLEYEDLIER 955
S + + + T + + ++++E L+VE D N F+ KL+ D+ ++
Sbjct: 104 SSLSRNLVNKTKNASETYQQLLEYALEVERDDNVFTYAKLQKSDMTQK 151
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 28.7 bits (61), Expect = 6.0
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 830 KHKKKHDLEKENSIKQLYEKQTEANPSAGRQVLESEPELNIKPEMPFEVIDEFEDDANVN 889
KH++K + EN I YE++ SAG +SE EL E + EDD ++
Sbjct: 16 KHQRKGKKQLENKILHSYEEE-----SAG---FDSE-ELEDNDEQGYSFGVNSEDDEEID 66
Query: 890 DDMATPQRDE 899
D A + DE
Sbjct: 67 SDEAFDEEDE 76
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 604 CTKCNTRYDTLESYLSHFTSHNYQSNTC 631
C CN+R DT +L H + + NTC
Sbjct: 348 CNDCNSRCDTKYHFLGHKCNSCHSYNTC 375
>SPBC11C11.04c |alp1||tubulin specific chaperone cofactor D
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1107
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 1098 WERHYALMDWKSQKKMDVVIVNTDKNNKNLSETMMKNIIDYILGDPKFKRQKICVVCKRT 1157
W HY ++ W SQ +N+ ++ ++ +T+ I Y L + ++ C+V R
Sbjct: 129 WHFHYIVLLWLSQALNTPFPLNSLDDSLDVKKTIYTIAIKY-LENSGIDKEASCLVLSRL 187
Query: 1158 FNR 1160
F+R
Sbjct: 188 FSR 190
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 577 SNDEGTECTENGDVISVNKYRVKQPCVCTKCNTRYDT-LESYLSH 620
SN + + E+G+V V+K ++ QP K + +Y + +S L H
Sbjct: 680 SNSQNSLSDESGNVTPVSKKQLSQPAAAIKASLKYPSHPDSLLEH 724
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 538 SFEIQLKYDSESSLKQSQREKSVSHIEHNISSDEFASDSSNDEGTECTEN 587
SF+I+ + +S ++ S + DEF++ S DEG T +
Sbjct: 163 SFQIKSSFSIPTSFSNDLKKPSFNSFSSGSFDDEFSAPSDEDEGNHKTSS 212
>SPBC18H10.10c |cwc16||complexed with Cdc5 protein
Cwf16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 469 EINTEPEECEDDXXXXXXXXXSLMKTRSTEQNTTEQNKE-LELVLEKNNQITNEP 522
+IN P + E+D +L +T+ T+Q + + N + + EKN ++ ++P
Sbjct: 100 DINERPAKAENDEKVPSDAIEAL-ETQLTQQKSEKHNSSVINFIYEKNERLWSDP 153
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 28.3 bits (60), Expect = 8.0
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 1244 YRCEICNKKFQTLPYLEKH 1262
YRCE+C+K+++ L L+ H
Sbjct: 399 YRCEVCSKRYKNLNGLKYH 417
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 775
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1341 KFKDLKDHYKDVHRKKYLKLMSG-NKKDKIKKLL 1373
K +L D Y D HRK K S NK+ K KLL
Sbjct: 66 KSSELNDDYLDAHRKSSTKKKSSQNKQAKESKLL 99
>SPBC660.13c |ssb1|rpa1, rad11|DNA replication factor A subunit Ssb1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 609
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 1012 CTKCDKEYDS-LYKYLEHLTCHDLKANTCPQCLKTFERTTKLMWH 1055
C KC+KEYD+ Y+Y+ + D +T L F+ KL+ H
Sbjct: 495 CEKCNKEYDAPQYRYIITIAVGD---HTGQLWLNVFDDVGKLIMH 536
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.134 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,935,607
Number of Sequences: 5004
Number of extensions: 319887
Number of successful extensions: 1215
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1020
Number of HSP's gapped (non-prelim): 199
length of query: 1396
length of database: 2,362,478
effective HSP length: 82
effective length of query: 1314
effective length of database: 1,952,150
effective search space: 2565125100
effective search space used: 2565125100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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