GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001803-TA|BGIBMGA001803-PA|IPR011356|Peptidase M17,
leucyl aminopeptidase, IPR000819|Peptidase M17, leucyl aminopeptidase,
C-terminal
         (510 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    28   0.13 
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   6.7  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 28.3 bits (60), Expect = 0.13
 Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 369 TAAQELNPHLYTIATLTGHARACYGNYVAAMDNHSARATNHSTRLQFSGTRVSEPIEVSY 428
           +A +E NP+L  + ++ G A A   ++VAA ++        S+ ++F  T   + ++V +
Sbjct: 86  SALKEKNPNLKVMLSVGG-ATASPDSFVAAANDPEKMKNMTSSAIEFFETYNYDGLDVDW 144

Query: 429 VRPEDLA 435
             P+D A
Sbjct: 145 EYPQDKA 151


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)

Query: 366 FAETAA-QELNPHLYTIATLTG 386
           FAE  A +E+NP+L TI ++ G
Sbjct: 83  FAEVEALKEINPNLKTIISIGG 104


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.135    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,044
Number of Sequences: 317
Number of extensions: 4235
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 510
length of database: 114,650
effective HSP length: 60
effective length of query: 450
effective length of database: 95,630
effective search space: 43033500
effective search space used: 43033500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)