Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001803-TA|BGIBMGA001803-PA|IPR011356|Peptidase M17,
leucyl aminopeptidase, IPR000819|Peptidase M17, leucyl aminopeptidase,
C-terminal
(510 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1055 - 33798162-33798290,33798417-33798604,33798707-337987... 75 2e-13
12_02_0137 + 14153603-14153629,14154136-14154586,14155066-141552... 67 4e-11
10_08_0494 - 18308105-18309490 31 2.9
03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235... 31 2.9
11_06_0128 - 20389375-20389781,20389988-20392787 29 8.8
04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062... 29 8.8
>02_05_1055 -
33798162-33798290,33798417-33798604,33798707-33798767,
33799045-33799122,33799250-33799472,33799599-33799824,
33799922-33800116,33800210-33800627,33800904-33801182
Length = 598
Score = 74.5 bits (175), Expect = 2e-13
Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 12/253 (4%)
Query: 180 VLARDIGGGDPERMSPIKIAEHLKSTFSGYSNXXXXXXXXXXXXNKDYPLLSAVSRAASH 239
+ +++ ++P +AE + S YS+ K+ + S + AA+
Sbjct: 282 IFGKELVNSPANVLTPAVLAEEASNIASTYSDVFTATILDVEKC-KELKMGSYLGVAAA- 339
Query: 240 IDRHKPRVVEIEYKPSDPARISETLLLVGKGVTYDTGGADIKISGKMXXXXXXXXXXXXX 299
+ P + + YKP L +VGKG+T+D+GG +IK
Sbjct: 340 -SANPPHFIHLCYKPPG-GNAKRKLAIVGKGLTFDSGGYNIKTGPGCSIELMKFDMGGSA 397
Query: 300 XXXXXXCSI--LKPPHLKVVAALCLCRNSIGEDSYVSDELLLSKSGKTVRVTNTDAEGRF 357
++ +KPP ++V + C N I +++ + +GKT+ V NTDAEGR
Sbjct: 398 AVFGAAKALGQIKPPGVEVHFIVAACENMISGTGMRPGDIVTASNGKTIEVNNTDAEGRL 457
Query: 358 AMADALYKFAETAAQELNPHLYTIATLTGHARACYGNYVAAMDNHSAR-ATNHSTRLQFS 416
+ADAL + + +ATLTG G +A + S A + + S
Sbjct: 458 TLADALVYACNQGVDK----IIDLATLTGACVVALGPSIAGIFTPSDELAKEVAAASEIS 513
Query: 417 GTRV-SEPIEVSY 428
G + P+E SY
Sbjct: 514 GEKFWRMPLEESY 526
>12_02_0137 +
14153603-14153629,14154136-14154586,14155066-14155260,
14155366-14155628,14155964-14156104,14156188-14156283,
14156672-14156749,14157134-14157194,14157324-14157511,
14158441-14158569
Length = 542
Score = 66.9 bits (156), Expect = 4e-11
Identities = 78/329 (23%), Positives = 133/329 (40%), Gaps = 41/329 (12%)
Query: 178 ARVLARDIGGGDPERMSPIKIAEHLKSTFSGYSNXXXXXXXXXXXXNKDYPLLSAVSRAA 237
A + A+++ ++P +AE + S YS+ ++ + S ++ AA
Sbjct: 207 AVIFAKELVNSPANVLTPAVLAEEASNIASSYSDVLTATILDEEKC-RELKMGSYLAVAA 265
Query: 238 SHIDRHKPRVVEIEYKPSDPARISETLLLVGKGVTYDT-----------------GGADI 280
+ + P + + YKP + L +VGKG+T+D GG +I
Sbjct: 266 A--SANPPHFIHLCYKPPG-GNVKRKLAIVGKGLTFDRFYLSLDNLLIVTKFVCIGGYNI 322
Query: 281 KISGKMXXXXXXXXXXXXXXXXXXXCSI--LKPPHLKVVAALCLCRNSIGEDSYVSDELL 338
KI ++ +KPP ++V C N I +++
Sbjct: 323 KIGAVTTIELMKKDMGGSAALFGAAKALGQIKPPGVEVHFISAACENMISGTGMRPGDIV 382
Query: 339 LSKSGKTVRVTNTDAEGRFAMADALYKFAETAAQELNPHLYTIATLTGHARACYGNYVAA 398
+ +GKT+ V NTDAEGR +ADAL + + + +ATLTG+ R G +A
Sbjct: 383 TASNGKTIEVDNTDAEGRLTLADALVYACKLGVDK----IIDLATLTGYCRIALGPSIAG 438
Query: 399 MDNHSARATNH-STRLQFSGTRVSE-PIEVSYVRPEDLAVNVGKCKGDDLLQVDMEKTFR 456
+ S + + SG + P+E SY E + +V D+L
Sbjct: 439 ILTPSDELDKEVAAAYEASGEKFWRLPLEESYW--EQMKSSVA-----DMLNTGSP---L 488
Query: 457 HHQLAAGFLIKVSGLEDKNVKYTHLDIAG 485
+ AG +K D+ VK+ H+D+AG
Sbjct: 489 GGAITAGLFLK--QFVDEKVKWMHVDMAG 515
>10_08_0494 - 18308105-18309490
Length = 461
Score = 30.7 bits (66), Expect = 2.9
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 325 NSIGEDSYVSDELLLSKSGKTVRVTNT--DAEGRFAMADALYKF---AETAAQELNPHLY 379
N + +V DELL G T+ N D R + A A+ ++ A A E+ P+LY
Sbjct: 26 NGAEDARHVFDELLRRGKGATIYGLNRALDDVARHSPAAAVSRYNRMARAGADEVTPNLY 85
Query: 380 TIATLTG 386
T + L G
Sbjct: 86 TYSVLIG 92
>03_01_0300 +
2350232-2352274,2352349-2352669,2352752-2352838,
2353031-2353708,2353800-2353964,2354139-2354433,
2354581-2354795,2354885-2355190,2355269-2355332,
2355426-2355665,2355783-2355886
Length = 1505
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 81 KITPYHDARVVKEAAYKGMTRALDAGAKRPL 111
++TPY DA +V A ++ L GA+RPL
Sbjct: 227 RVTPYGDAGIVSLATLSWLSPLLSVGAQRPL 257
>11_06_0128 - 20389375-20389781,20389988-20392787
Length = 1068
Score = 29.1 bits (62), Expect = 8.8
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 126 VAILGALEALYVPLQMRERDSTRNFSRIGLHAEEKRTENFEKIVR 170
VAILG L LY L R++++T+N S + A R+ +F ++ +
Sbjct: 697 VAILGILLLLYKYLNRRKKNNTKNSSETSMQAH--RSISFSQLAK 739
>04_04_1693 +
35404336-35404515,35405732-35406019,35406189-35406278,
35406487-35406564,35406638-35406718,35407300-35407350,
35407788-35407933,35408169-35408235,35408328-35408387,
35408472-35408501,35408776-35408835,35408936-35409052,
35409790-35409903,35410068-35410166,35410572-35410697,
35410774-35410848,35410958-35411029,35411167-35411277,
35411760-35411843,35413149-35413256,35414207-35414308,
35414393-35414455,35414524-35414598,35414901-35414972,
35415063-35415187,35415251-35415302,35415380-35415448,
35415525-35415540,35415941-35415989,35416607-35417180
Length = 1077
Score = 29.1 bits (62), Expect = 8.8
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 335 DELLLSKSGKTVRVTNTDAEGRFAMADALYKFAETAAQELNPHLYTIATLTGHARACYGN 394
D++LL G RV +T+ + A A E AA+EL PHL + H YG
Sbjct: 499 DKILL---GLLRRVLDTNKRVQEAACSAFATLEEEAAEELVPHL---GIILQHLMCAYGK 552
Query: 395 Y 395
Y
Sbjct: 553 Y 553
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.135 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,152,005
Number of Sequences: 37544
Number of extensions: 563682
Number of successful extensions: 1117
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1109
Number of HSP's gapped (non-prelim): 9
length of query: 510
length of database: 14,793,348
effective HSP length: 85
effective length of query: 425
effective length of database: 11,602,108
effective search space: 4930895900
effective search space used: 4930895900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -