GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001803-TA|BGIBMGA001803-PA|IPR011356|Peptidase M17,
leucyl aminopeptidase, IPR000819|Peptidase M17, leucyl aminopeptidase,
C-terminal
         (510 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78018-4|CAB01448.1|  522|Caenorhabditis elegans Hypothetical pr...   305   4e-83
L15313-6|AAA28198.1|  491|Caenorhabditis elegans Leucine aminope...    73   6e-13

>Z78018-4|CAB01448.1|  522|Caenorhabditis elegans Hypothetical
           protein W07G4.4 protein.
          Length = 522

 Score =  305 bits (749), Expect = 4e-83
 Identities = 178/505 (35%), Positives = 271/505 (53%), Gaps = 24/505 (4%)

Query: 16  TNLQSADYDAVILILYPEELN----VPLPRHIGSFVDGIGKLDKHIHKSATVWQCD--YV 69
           T++  A +DAV+L+   + +     +     I   V+   KL      S ++ Q D   V
Sbjct: 15  TSIADAAFDAVVLVGSQDNVQQFGAIQQVSAIAPAVNNFLKLHSGAFNSTSLVQVDSSVV 74

Query: 70  SGGRIILAPTGKIT-PYHDARVVKEAAYKGMTRALDAGAKRPLLVVQNVVDFPDGQLVAI 128
             GR+IL+ TG ++  Y D R  + AA KG++ AL AG K PLL+      FP+ +LVA 
Sbjct: 75  PSGRLILSGTGNVSRDYDDVRRYQAAARKGISMALSAGVKSPLLITLPNSRFPNAELVAA 134

Query: 129 LGALEALYVPLQMRERDSTRNFSRIGLHA--EEKRTENFEKIVRNAIALERARVLARDIG 186
           LGAL  +Y PL +RE ++ +  +++GL A      +   EK+V    A + +  + RD+G
Sbjct: 135 LGALTPVYTPLNVREEENKQKLNQLGLLAIGNSDTSARLEKLVE---AYDASFTVCRDVG 191

Query: 187 GGDPERMSPIKIAEHLKSTFSGYSNXXXXXXXXXXXXNKDYPLLSAVSRAASHIDRHKPR 246
              PERM+P ++AE+++  F+   N             KD+PL++AV+RAA+ +  H+ R
Sbjct: 192 EAGPERMAPPRVAEYIQGAFAN-GNIKVTVVDDQSVILKDFPLMAAVNRAANCVKEHQAR 250

Query: 247 VVEIEYKPSDPARISETLLLVGKGVTYDTGGADIKISGKMXXXXXXXXXXXXXXXXXXXC 306
           ++ +EY      +  +T  +VGKGVT DTGG D+K  G M                    
Sbjct: 251 LIRLEYVGEGETQ--DTFFVVGKGVTIDTGGCDLKTGGHMFGMCRDKYGSAVVGGFFKAI 308

Query: 307 SILKPPHLKVVAALCLCRNSIGEDSYVSDELLLSKSGKTVRVTNTDAEGRFAMADALYKF 366
            +LKP ++K V  +C+ RNSIG  +Y  DE++ S+SGK + + NTDAEGR  M D L   
Sbjct: 309 DVLKPKNIKAVGYMCMVRNSIGSHAYTCDEVITSRSGKRIHIYNTDAEGRLTMLDPLTLA 368

Query: 367 AETAAQELNPHLYTIATLTGHARACYGNYVAAMDNHSARATNHSTRLQFSGTRVSEPIEV 426
            E A    NPHL+T+ATLTGH    YG Y A MDN  A+A+  + R+Q  G    +PIE+
Sbjct: 369 KEEALNAKNPHLFTVATLTGHEVLSYGYYAAIMDNGPAKASGWARRVQNVGDEFGQPIEI 428

Query: 427 SYVRPEDLAVNVGKCKGDDLLQVDME---KTFRHHQLAAGFLIKVSGLEDKN------VK 477
           S + PED A ++ +C+  DL Q + +    T R HQ  A FL   S +++        +K
Sbjct: 429 SRLHPEDFAFHMAECEQADLRQGNTKPSVATLRGHQTPAAFLQMASRIDEHGTNSSHPLK 488

Query: 478 YTHLDIAGAAGSPPCEPTAVPILSL 502
           Y+H+D+ G +G  P      P+++L
Sbjct: 489 YSHIDMGGCSGDHPSVSFPNPLVTL 513


>L15313-6|AAA28198.1|  491|Caenorhabditis elegans Leucine
           aminopeptidase protein 1 protein.
          Length = 491

 Score = 72.5 bits (170), Expect = 6e-13
 Identities = 64/229 (27%), Positives = 100/229 (43%), Gaps = 12/229 (5%)

Query: 261 SETLLLVGKGVTYDTGGADIKISGKMXXXXXXXXXXXXXXXXXXXCSILKPPHLKVV-AA 319
           +E + LVGKGV YDTGG  IK    M                    +++K    + + A 
Sbjct: 244 TEHIALVGKGVVYDTGGLQIKTKTGMPNMKRDMGGAAGMLEAYS--ALVKHGFSQTLHAC 301

Query: 320 LCLCRNSIGEDSYVSDELLLSKSGKTVRVTNTDAEGRFAMADALYKFAETAAQELNPHLY 379
           LC+  N++   +   D+++   SGKTV + NTDAEGR  +AD ++   ET        ++
Sbjct: 302 LCIVENNVSPIANKPDDIIKMLSGKTVEINNTDAEGRLILADGVFYAKETLKATT---IF 358

Query: 380 TIATLTGHARACYGN-YVAAMDNHSARATNHSTRLQFSGTRVSEPIEVSYVRPEDLAVNV 438
            +ATLTG      G  + AAM N            + SG  V+  +    +   DL  ++
Sbjct: 359 DMATLTGAQAWLSGRLHGAAMTNDEQLENEIIKAGKASGDLVAPMLFAPDLFFGDLKSSI 418

Query: 439 GKCKGDDLLQVDMEKTFRHHQLAAGFLIKVSGLEDKNVKYTHLDIAGAA 487
              K  +L ++D   +       AG  I       + +++ HLDIA  A
Sbjct: 419 ADMKNSNLGKMDGPPS-----AVAGLFIGAHIGFGEGLRWLHLDIAAPA 462


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.319    0.135    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,489,946
Number of Sequences: 27539
Number of extensions: 445186
Number of successful extensions: 921
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 912
Number of HSP's gapped (non-prelim): 2
length of query: 510
length of database: 12,573,161
effective HSP length: 85
effective length of query: 425
effective length of database: 10,232,346
effective search space: 4348747050
effective search space used: 4348747050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)