GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001802-TA|BGIBMGA001802-PA|undefined
         (706 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   9.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   9.5  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 304 GHVSTMTSVSLTAVNQNDAYERLC 327
           GH  T  S+S T+    D Y+ +C
Sbjct: 68  GHRKTDNSLSATSKKDKDGYKVVC 91


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 255 APHTAIPIVSTEDVFDFDVNRKTPNFVNIVNTEVNVQNTNDYGT 298
           A H    +V   D     +NRK   F+N      NV+  +D  T
Sbjct: 535 AGHPVDSVVWERDGRQLPINRKQKVFINGTLIIENVERASDQAT 578


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.129    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,758
Number of Sequences: 317
Number of extensions: 5670
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 2
length of query: 706
length of database: 114,650
effective HSP length: 62
effective length of query: 644
effective length of database: 94,996
effective search space: 61177424
effective search space used: 61177424
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 46 (22.6 bits)