Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001802-TA|BGIBMGA001802-PA|undefined
(706 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4869| Best HMM Match : Coprinus_mating (HMM E-Value=2.8) 35 0.26
SB_43060| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.45
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 33 0.60
SB_1787| Best HMM Match : Peptidase_S9 (HMM E-Value=1.5e-08) 33 0.60
SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94) 33 1.0
SB_50834| Best HMM Match : GCR (HMM E-Value=2.5) 31 2.4
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 31 3.2
SB_28494| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.2
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 31 3.2
SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.2
SB_46434| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.2
SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.2
SB_43624| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.6
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.3
SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.3
SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05) 29 9.7
SB_10860| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.7
SB_8703| Best HMM Match : rve (HMM E-Value=1.5e-22) 29 9.7
>SB_4869| Best HMM Match : Coprinus_mating (HMM E-Value=2.8)
Length = 796
Score = 34.7 bits (76), Expect = 0.26
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 530 SLLTRLRAFGQSRRQESPTRNENGNDRNPLTSPVKVVRRSRPEAREGVRRRSNSLSNETV 589
S + R+++ G R +E+PT N P +S + + RP + +G R +S ++ T
Sbjct: 326 SKIRRVQSAGTKRSKENPTGARNEPKPRPASSKGTMNTQKRPSSYKGDRNKSKRPASSTK 385
Query: 590 NSAEPRP-GTLIGAPL 604
RP + I PL
Sbjct: 386 TETSSRPVSSKISEPL 401
>SB_43060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.9 bits (74), Expect = 0.45
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 567 RRSRPEAREGVRRRSNSLSNE-TVNSAEPRPGTLIGAPLSVRDGPVFADYSGHVWICRWG 625
RR R + G + S S NE T +S+ P P +L +VR P F G+
Sbjct: 582 RRHRKGGKNGDKSNSVSSRNEVTPSSSTPEPSSL-AVKETVRPPPGFEMVQGNAGGFSTP 640
Query: 626 GPSPGVGR 633
GP PG+GR
Sbjct: 641 GPPPGLGR 648
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 33.5 bits (73), Expect = 0.60
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 471 RNVLDAHIVRSHSQNAYENSPRRVVVRRVQATSPKRDAQTDKSDQIQPKPIWKRGLTEFS 530
R +L + RS + SPR+ ++ SP++ + T K P+ +R E S
Sbjct: 205 RKMLRSPRKRSRTPRKRSRSPRK------RSRSPRKGSHTPKKRSRSPRRNSQRH-KERS 257
Query: 531 LLTRLRAFGQSRRQESPTRNENGNDRNPLTSPVKVVRRSRPEAREGVRRRSNSLS 585
R R+ + RR S + + +DR S K RSR +R R+RS S S
Sbjct: 258 RYHRSRSRSRHRRSRSNSPSMRKSDRKFKKSQRKSRSRSRNRSRSHSRKRSRSSS 312
>SB_1787| Best HMM Match : Peptidase_S9 (HMM E-Value=1.5e-08)
Length = 1057
Score = 33.5 bits (73), Expect = 0.60
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 434 ITSTPSVSHAQVNRTVNNISAAHVSPEPISLTSSEVNRNVLDAHIVRSHSQNAYENSPRR 493
I T + H+ N+S H P +S + + N+ V HS + ++PR
Sbjct: 534 IPKTSTDDHSYGRSATKNLSPEHEVPYELS-NAQDTNKKVRIVSPTLPHSDKSSSHTPRD 592
Query: 494 VVVRRVQATSP--KRDAQTDKSDQIQPK 519
RVQA SP K Q+ ++P+
Sbjct: 593 WSESRVQAESPVQKHGLQSSLPGSVKPR 620
>SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94)
Length = 450
Score = 32.7 bits (71), Expect = 1.0
Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 3/119 (2%)
Query: 483 SQNAYENSPRRVVVRRVQATSPK-RDAQTDKSDQIQPKPIWKRGLTEFSLLTRLRAFGQS 541
S NSPRRV + Q + P R + +S P +R + + R QS
Sbjct: 332 SSRQQSNSPRRVPLSPRQQSRPVVRGRRYSQSPNRAPVSQRQRSQSPQRVQASPRRRSQS 391
Query: 542 RRQESPTRNENGNDRNPLTSPVKVVRRSRPEAREGVRRRSNSLSNETVNSAEPRPGTLI 600
SP R +R ++ + RS A RR+S S + + V+SA P P I
Sbjct: 392 PDHVSPRRKSQTPNR--ASTSTRQQSRSPNRASTSSRRQSKSPNRDPVSSAIPLPSRAI 448
>SB_50834| Best HMM Match : GCR (HMM E-Value=2.5)
Length = 909
Score = 31.5 bits (68), Expect = 2.4
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 448 TVNNISAAHVSPEPISLT-SSEVNRNVLDAHIVRSHSQNAYENSPRRVVVRRVQATSPKR 506
T+ + ++ P+ S T SS+VN+ RSH ++YE P + + Q TS
Sbjct: 16 TITQSAISNECPKKTSQTLSSQVNKA---EESTRSHDGSSYEEEPTSSISEQEQDTSD-- 70
Query: 507 DAQTDKSDQIQPKPIWKRGLTEFSLLTRLRAFGQSRRQESPTRNENGND 555
D + S I P + L E LL+R+ + R + P GND
Sbjct: 71 DISSVSSHSITTVP--RLSLDELKLLSRVCHLLRKRNEPLPI-GHIGND 116
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 31.1 bits (67), Expect = 3.2
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Query: 505 KRDAQTDKSDQIQPKPIWKRGLTEFSLLTRLRAFGQSRRQESPTRNENGNDRNPLTSPVK 564
KR ++ D+S + L +R R+ RR+ S +R+ R+ SP +
Sbjct: 293 KRKSKRDRSRSRDRSSSKSKSLRRSKKYSRSRSRSSERRRRSRSRSTEHRYRSRSRSPRR 352
Query: 565 VVRRS---RPEAR-----EGVRRRSNSLSNETVNSAEPRPGTLIGAPLSVR 607
RRS P R +G +RRS S S V + GT + P +R
Sbjct: 353 KHRRSTSTSPSRRYRSGKKGHKRRSRSASRVPVRATANNDGTRLKYPGDLR 403
>SB_28494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 31.1 bits (67), Expect = 3.2
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 444 QVNRTVNNISAAHVSPEPISLTSSEVNRNVLDAHIVRSHSQNAYENSPRRVVVRRVQATS 503
QVN+ VN ++ + + SEV + V +VRSH + A
Sbjct: 332 QVNKIVNKANSTLGFIKRNLYSCSEVTKRVAYVTLVRSHLEYA------------AAVWD 379
Query: 504 PKRDAQTDKSDQIQPKPIWKRGLTEFSLLTRLRAFGQS 541
P R Q DK + +Q + +WK +++ R RA QS
Sbjct: 380 PYRQDQVDKIEAVQRRAVWK--FVVHNMIMRKRALEQS 415
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 31.1 bits (67), Expect = 3.2
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 491 PRRVVVRRVQ-ATSPKRDAQTDKSDQIQPKPIWKRGLTEFSLLTRLRAFGQSRRQESPTR 549
PRR RR + SP R + ++ P +RG E + ++ LR SR +E+ R
Sbjct: 320 PRRSKGRREDNSVSPPR-GNRGRREKNSASPSRRRGRREETSVSPLRRSKDSREEETQKR 378
Query: 550 NENGNDRNPLTSPVKVVRRSRPEAREGVRRRSNS 583
+ D +P+ + +R+ + R RR S
Sbjct: 379 VDAPRDPSPMEEERRQSQRATSKQRTNPDRRRKS 412
>SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 31.1 bits (67), Expect = 3.2
Identities = 34/120 (28%), Positives = 47/120 (39%), Gaps = 12/120 (10%)
Query: 212 DEELGETEEYRQTVLVPEDSADVDQPRIDCPSNITVIQVSNREAPHTAIPIVSTEDVFDF 271
D E + + T PE + D P + S IT E P T ST D D
Sbjct: 60 DPEFMKHTQSTITTETPETQSTTDTP--ETQSTITT------ETPETQ----STTDTRDP 107
Query: 272 DVNRKTPNFVNIVNTEVNVQNTNDYGTVFNDYGHVSTMTSVSLTAVNQNDAYERLCNAST 331
NR T + +N +T V NT+ V N Y + + + VN ND + + N T
Sbjct: 108 VNNRDTRDPINNRDTRDPVNNTDTRDPVNNSYTRDTVNNTDTRDPVNNNDTRDPVNNRDT 167
>SB_46434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 30.7 bits (66), Expect = 4.2
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 61 TEKGPVRMLAPDWETMQDWVTTLRNKLSELKIMSKGENVYCAPP 104
T++ ++M A +++ + +K+SEL+ +KGEN+ A P
Sbjct: 35 TQESQLQMKAELIHNLEEMIEEQESKISELEARNKGENISAATP 78
>SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1296
Score = 30.7 bits (66), Expect = 4.2
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Query: 246 TVIQVSNREAPHTAIPIVSTEDVFDFDVNRKTPNFVNIVNTEVNVQNTN---DYGTVFND 302
TV+ V+ HT+ I S+ FDF R I+ T N + N D+ T F+
Sbjct: 259 TVLNVARTTFTHTSTEIASSTHRFDFGSGRFHGLPYGIIVTNRNGADANRLDDFTTAFHI 318
Query: 303 YGHVSTMTSVSLTAVNQNDAYERL 326
+ +S S +AY R+
Sbjct: 319 SNQIFDSSSASFRVYCATNAYPRM 342
>SB_43624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 30.3 bits (65), Expect = 5.6
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 480 RSHSQNAYEN--SPRRVVVRRVQATSPKRDAQTDKSDQIQPKP 520
R H+ YE+ SP + V+R++ + + DA T SD P P
Sbjct: 85 RKHANPVYESTKSPVHMAVKRIRQDTERSDASTLSSDSWNPYP 127
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 29.9 bits (64), Expect = 7.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 571 PEAREGVRRRSNSLSNETVNSAEPRPGTLIGAPLSVRDGPVFADYS 616
P+ R+ + R +++ +++EP T +GAP RD V YS
Sbjct: 2643 PQIRDAITPREPVSASDRTSTSEPSGRTSVGAPARERDPSVIDVYS 2688
>SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 29.9 bits (64), Expect = 7.3
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 8/131 (6%)
Query: 459 PEPISLTSSEVNRNVLDAHIVRSHSQNAYENSPRRVVVRRVQATSPKRDAQTDKSDQIQP 518
PE L E+ V + +RS +A V V R + K D + D+S Q++
Sbjct: 203 PEEQKL-KEEIEEKVQELRYLRSQVTDAQTT----VAVIRSELAQLKNDYE-DQSSQLEA 256
Query: 519 -KPIWKRGLTEFSLLTRLRAFGQSRRQESPTRNENGNDRNPLTSPVKVVRRS-RPEAREG 576
K + E LTR SRR + T +G+DR+P ++ R S EG
Sbjct: 257 EKRNVMECVQEQESLTRQLQLLHSRRASNLTGEFSGDDRHPNSASASTPRSSVAAPPPEG 316
Query: 577 VRRRSNSLSNE 587
RR S L +
Sbjct: 317 SRRSSMLLPTQ 327
>SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05)
Length = 493
Score = 29.5 bits (63), Expect = 9.7
Identities = 26/117 (22%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Query: 471 RNVLDAHIVRSHSQNAYENSPRRVVVRRVQATSPKRDAQTDKSDQIQPKPIWKRGLTEFS 530
R ++A I ++ R V+ + + K+ T +IQ KP K T+
Sbjct: 299 REAIEAGIALKQTKKKLATPLREVIKSKPKLKETKKKLATPLRKEIQSKPALKE--TKKR 356
Query: 531 LLTRLRAFGQSRRQESPTRNENGNDRNPLTSPVKVVRRSRPEAREGVRRRSNSLSNE 587
L T +RA +S+ + T+ + L +PV+ ++P+ R + +L +E
Sbjct: 357 LATPIRAEIESKPKLKETKKK-------LATPVRAEIENKPKLRHTKKVMETALQDE 406
>SB_10860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1292
Score = 29.5 bits (63), Expect = 9.7
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 173 FAMPSTSQRSEGIAKICGQNICLDGSLLERIGSGSGGDFDEEL 215
+A P+ +Q++ +AKI + I + +R+ S G DF+ L
Sbjct: 951 WAFPTRNQKASTVAKILWERIFVSYGFPQRLHSDQGRDFESRL 993
>SB_8703| Best HMM Match : rve (HMM E-Value=1.5e-22)
Length = 382
Score = 29.5 bits (63), Expect = 9.7
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 173 FAMPSTSQRSEGIAKICGQNICLDGSLLERIGSGSGGDFDEEL 215
+A P+ +Q++ +AKI + I + +R+ S G DF+ L
Sbjct: 51 WAFPTRNQKASTVAKILWERIFVSYGFPQRLHSDQGRDFESRL 93
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.129 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,322,035
Number of Sequences: 59808
Number of extensions: 866985
Number of successful extensions: 1956
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1945
Number of HSP's gapped (non-prelim): 21
length of query: 706
length of database: 16,821,457
effective HSP length: 87
effective length of query: 619
effective length of database: 11,618,161
effective search space: 7191641659
effective search space used: 7191641659
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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