GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001802-TA|BGIBMGA001802-PA|undefined
         (706 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   6.8  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    25   9.0  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    25   9.0  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 6.8
 Identities = 30/163 (18%), Positives = 63/163 (38%), Gaps = 5/163 (3%)

Query: 429 VSIAQITSTPSVSHAQVNRTVNNISAAHVSPEPISLTSSEVNRNVLDAHIVRSHSQNAYE 488
           VS + + S  ++ +AQVN T+N I+     PE       +V  +++ ++ + +H +N + 
Sbjct: 299 VSPSLVNSQKAMVYAQVNMTLNEITPYDKYPEG-PADDRQVFVDLVYSYNM-AHDKNNFV 356

Query: 489 NSPRRVVVRRVQATSPKRDAQTDKSDQIQPKPIWKRGLTEFSLLTRLRAFGQSRRQESPT 548
                       ++S   D+ +D S              E   ++    + +  ++    
Sbjct: 357 RPANETDDSSSSSSSSSSDSDSDSSSSSDSSSSSSEEEAENFKISTAEQYKKQAKEVERR 416

Query: 549 RNENGNDRNPLTSPVKVVRRSRPEAREGVRRRSNSLSNETVNS 591
            N N  D N            R + R    R+ N  S+++ +S
Sbjct: 417 GNRNRRDLNAFKEKQYYEAYKRDQYR---LRKQNDTSSDSSSS 456


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 9.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 50  RQGNEYDFLVDTEKGPVRMLAPDWE 74
           R  N Y+ L+D EK     L  DW+
Sbjct: 174 RADNTYEVLIDNEKVESGSLEDDWD 198


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.6 bits (51), Expect = 9.0
 Identities = 30/163 (18%), Positives = 63/163 (38%), Gaps = 5/163 (3%)

Query: 429 VSIAQITSTPSVSHAQVNRTVNNISAAHVSPEPISLTSSEVNRNVLDAHIVRSHSQNAYE 488
           VS + + S  ++ +AQVN T+N I+     PE       +V  +++ ++ + +H +N + 
Sbjct: 299 VSPSLVNSQKAMVYAQVNMTLNEITPYDKYPEG-PADDRQVFVDLVYSYNM-AHDKNNFV 356

Query: 489 NSPRRVVVRRVQATSPKRDAQTDKSDQIQPKPIWKRGLTEFSLLTRLRAFGQSRRQESPT 548
                       ++S   D+ +D S              E   ++    + +  ++    
Sbjct: 357 RPANETDDSSSSSSSSSSDSDSDSSSSSDSSSSSSEEEAENFKISPAEQYKKQAKEVERR 416

Query: 549 RNENGNDRNPLTSPVKVVRRSRPEAREGVRRRSNSLSNETVNS 591
            N N  D N            R + R    R+ N  S+++ +S
Sbjct: 417 GNRNRRDLNAFKEKQYYEAYKRDQYR---LRKQNDTSSDSSSS 456


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.129    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,016
Number of Sequences: 2123
Number of extensions: 25221
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 3
length of query: 706
length of database: 516,269
effective HSP length: 69
effective length of query: 637
effective length of database: 369,782
effective search space: 235551134
effective search space used: 235551134
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)