BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001801-TA|BGIBMGA001801-PA|IPR010339|TIP49, C-terminal (408 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_57353| Best HMM Match : TIP49 (HMM E-Value=0) 430 e-121 SB_16660| Best HMM Match : TIP49 (HMM E-Value=1.1e-21) 138 1e-32 SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14 SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2 SB_9354| Best HMM Match : Endonuclease_7 (HMM E-Value=0.18) 29 5.2 SB_21| Best HMM Match : NOC3p (HMM E-Value=0.0058) 29 6.8 SB_40271| Best HMM Match : TPR_2 (HMM E-Value=4.6e-24) 29 9.0 >SB_57353| Best HMM Match : TIP49 (HMM E-Value=0) Length = 283 Score = 430 bits (1060), Expect = e-121 Identities = 198/266 (74%), Positives = 231/266 (86%) Query: 131 DVITIDKATGKINKLGRSFARARDYDATGQQARFVQCPEGELQKRKEVVHTVTLHEVDVI 190 D+ITIDKATGKI+KLGRSF RARDYDA G Q +FVQCPEGELQKRKEVVHTVTLHE+DVI Sbjct: 2 DIITIDKATGKISKLGRSFTRARDYDAMGPQTKFVQCPEGELQKRKEVVHTVTLHEIDVI 61 Query: 191 NSRTHGFLALFSGDTGEIKSEIREQINSKVAEWREEGKAEMIPGVLFIDEAHMLDIECFS 250 NSRT GFLALF+GDTGEIKSE+REQINSKVAEWREEGKA+++PGVLF+DE HMLDIECFS Sbjct: 62 NSRTQGFLALFAGDTGEIKSEVREQINSKVAEWREEGKADIVPGVLFVDEVHMLDIECFS 121 Query: 251 FLNRALESETAPIVIMATNXXXXXXXXXXYRSPHGIPLDLLDRMIIVATSPYSQSELKDI 310 FLNRALES+ AP++IMATN Y+SPHGIPLDLLDR++I++T PY + +L+ I Sbjct: 122 FLNRALESDMAPVLIMATNRGITKIRGTNYKSPHGIPLDLLDRLLIISTHPYEEKDLRHI 181 Query: 311 LNIRCEEEDCQMSADALTVLTRVATETSLRYAIQLITTASLVAKRRKAAEVSMEDVKKVY 370 L IRCEEED +MS DA+ VLT++A ETSLRY+IQLIT ASLV ++RK EV+M+D+K+VY Sbjct: 182 LTIRCEEEDVEMSDDAMMVLTKIAQETSLRYSIQLITAASLVCRKRKGTEVAMDDIKRVY 241 Query: 371 SLFLDEHRSEQFLKEYQDEFMFNDGS 396 SLF DE RS QFLKEYQ EFMFN+ S Sbjct: 242 SLFFDESRSTQFLKEYQQEFMFNEES 267 >SB_16660| Best HMM Match : TIP49 (HMM E-Value=1.1e-21) Length = 150 Score = 138 bits (333), Expect = 1e-32 Identities = 68/149 (45%), Positives = 97/149 (65%) Query: 243 MLDIECFSFLNRALESETAPIVIMATNXXXXXXXXXXYRSPHGIPLDLLDRMIIVATSPY 302 MLDIECF++L+RALES +PIVI ATN +PHGIPLDLLDR++IV T PY Sbjct: 1 MLDIECFTYLHRALESTISPIVIFATNRGNCTIRGTEISAPHGIPLDLLDRVMIVRTLPY 60 Query: 303 SQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLRYAIQLITTASLVAKRRKAAEVS 362 SQ E+ I+ IR + E Q+ ++L +L T+T+LRYA+QL+T A+L+A+ ++ Sbjct: 61 SQDEMMQIIKIRAQIEGIQVDDESLELLGETGTKTTLRYAVQLLTPANLLARINGRDTIN 120 Query: 363 MEDVKKVYSLFLDEHRSEQFLKEYQDEFM 391 DV+++ LF D S + L E D++M Sbjct: 121 KGDVEEINELFYDAKSSAKLLAEQADKYM 149 >SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 306 Score = 77.4 bits (182), Expect = 2e-14 Identities = 36/45 (80%), Positives = 41/45 (91%) Query: 22 GAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIREVK 66 GAHSHIRGLGLDD+LE RQVSQGMVGQ AR+AAG+IL+MI+E K Sbjct: 122 GAHSHIRGLGLDDALEARQVSQGMVGQVTARRAAGIILEMIKEGK 166 Score = 50.8 bits (116), Expect = 2e-06 Identities = 23/30 (76%), Positives = 27/30 (90%) Query: 101 LTLKTTDMETNYDMGAQMIDSLLKEKVQAG 130 LTLKTT+MET YD+G +MI+SL KEKVQAG Sbjct: 256 LTLKTTEMETIYDLGTKMIESLTKEKVQAG 285 >SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1716 Score = 29.5 bits (63), Expect = 5.2 Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 3/83 (3%) Query: 164 FVQCPEGELQKRKEVVHTVTLHEVDVINSRTHGFLALFSGDTGEIKSEIREQINSKVAEW 223 F +C +G L K+ ++ T H++ + + H L G T E Q + +++ Sbjct: 649 FERCIQGILSKKTRILVT---HQLQYLQNADHILLMKDGGITREGSYAEISQSSEEISFL 705 Query: 224 REEGKAEMIPGVLFIDEAHMLDI 246 E G+A ++P L D + +++ Sbjct: 706 EEHGEAPVVPRPLLRDRSLEVEV 728 >SB_9354| Best HMM Match : Endonuclease_7 (HMM E-Value=0.18) Length = 386 Score = 29.5 bits (63), Expect = 5.2 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Query: 175 RKEVVHTVTLHEVDVINSRTHGFLALFSGDTGEIKSEIREQINSKVAEWREEGKAEMIPG 234 +K+V + L + NS T + S + G+ +Q+ +K+A+W EG +I Sbjct: 49 KKKVGDDIKLFKTAYFNSSTQTIIN--STEIGKALRNTHQQVLNKIAQWVSEGSGWVIES 106 Query: 235 VLFIDEAHMLDIE 247 V + H L+I+ Sbjct: 107 V----DGHYLNID 115 >SB_21| Best HMM Match : NOC3p (HMM E-Value=0.0058) Length = 423 Score = 29.1 bits (62), Expect = 6.8 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Query: 310 ILNIRCEEEDCQMSADALTVLTRVATETSLRYAIQLITTASLVAK-RRKAAEVSMEDVKK 368 +LN+ + +L + + E +++Q T K ++K A+ S+E+ K+ Sbjct: 35 VLNVEENKSKALYKNHSLVSTSSLQAEIRQLHSLQQKRTTQPQQKAKKKTAKFSLENEKE 94 Query: 369 VYSLFLDEHRSEQFLKEYQDEFMFNDGSG 397 Y + + RS +FL D+ N G Sbjct: 95 DYEFYQNVDRSLEFLTNLDDDASTNGKLG 123 >SB_40271| Best HMM Match : TPR_2 (HMM E-Value=4.6e-24) Length = 1329 Score = 28.7 bits (61), Expect = 9.0 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 2/84 (2%) Query: 290 LLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLRYAIQLITTA 349 LL + V + YS S K + +EE AD ++ TET LR I+L Sbjct: 449 LLSSLTRVVLALYSNSSTKSNGIKQMQEEFNFKMADMFSIEGEQKTETKLR--IRLAKLM 506 Query: 350 SLVAKRRKAAEVSMEDVKKVYSLF 373 L +R+ V ++VK + LF Sbjct: 507 ELFTERKSRPVVIFDNVKDLKLLF 530 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.317 0.131 0.358 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,198,450 Number of Sequences: 59808 Number of extensions: 348259 Number of successful extensions: 950 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 945 Number of HSP's gapped (non-prelim): 10 length of query: 408 length of database: 16,821,457 effective HSP length: 84 effective length of query: 324 effective length of database: 11,797,585 effective search space: 3822417540 effective search space used: 3822417540 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 61 (28.7 bits)
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