Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001801-TA|BGIBMGA001801-PA|IPR010339|TIP49, C-terminal
         (408 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   6.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   6.2  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 14/49 (28%), Positives = 22/49 (44%)

Query: 331 TRVATETSLRYAIQLITTASLVAKRRKAAEVSMEDVKKVYSLFLDEHRS 379
           T  A +  +  + + + + S   K R   EV  + + K Y L   EHRS
Sbjct: 554 TSQAMQIHISQSTKELLSPSYRVKERGEIEVKGKGIMKTYWLEKREHRS 602


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)

Query: 374 LDEHR-SEQFLKEYQDEFMFNDG 395
           +D H  SE F+K Y++E    +G
Sbjct: 360 VDHHTASESFMKHYENEMRLRNG 382


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.131    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,705
Number of Sequences: 429
Number of extensions: 2904
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 2
length of query: 408
length of database: 140,377
effective HSP length: 59
effective length of query: 349
effective length of database: 115,066
effective search space: 40158034
effective search space used: 40158034
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)