Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001801-TA|BGIBMGA001801-PA|IPR010339|TIP49, C-terminal
(408 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 416 e-117
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 232 6e-62
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 27 4.8
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 27 6.3
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 26 8.4
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 26 8.4
SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces p... 26 8.4
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 416 bits (1025), Expect = e-117
Identities = 192/302 (63%), Positives = 243/302 (80%), Gaps = 1/302 (0%)
Query: 101 LTLKTTDMETNYDMGAQMIDSLLKEKVQAGDVITIDKATGKINKLGRSFARARDYDATGQ 160
LT+++TDMET YD+G +MIDSL KEKV AGDVI+IDK+ G++ KLGRSF+RARDYDA G
Sbjct: 155 LTIRSTDMETVYDLGTKMIDSLTKEKVLAGDVISIDKSVGRVTKLGRSFSRARDYDAMGA 214
Query: 161 QARFVQCPEGELQKRKEVVHTVTLHEVDVINSRTHGFLALFSGDTGEIKSEIREQINSKV 220
RFVQCP+GE+QKRKEVVHTV+LH++DVINSRT GFLALFSGDTGEIK E+REQIN+KV
Sbjct: 215 DTRFVQCPQGEIQKRKEVVHTVSLHDIDVINSRTQGFLALFSGDTGEIKPEVREQINTKV 274
Query: 221 AEWREEGKAEMIPGVLFIDEAHMLDIECFSFLNRALESETAPIVIMATNXXXXXXXXXXY 280
+EWREEGKAE++PGVLF+DE HMLDIECFSF NRALE + APIVIMA+N Y
Sbjct: 275 SEWREEGKAEIVPGVLFVDEVHMLDIECFSFFNRALEDDLAPIVIMASNRGITRIRGTNY 334
Query: 281 RSPHGIPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLR 340
RSPHGIP+DLLDRM+I++T PYS E+K+IL IRC+EED M AL L+ + ETSLR
Sbjct: 335 RSPHGIPVDLLDRMLIISTLPYSHEEVKEILKIRCQEEDVDMEPSALDYLSTIGQETSLR 394
Query: 341 YAIQLITTASLVAKRRKAAEVSMEDVKKVYSLFLDEHRSEQFLKEYQDEFMF-NDGSGDA 399
YA+ LI++++ VA +RK+A + D+++VY LFLD+ RS ++L+EY ++ N+ S
Sbjct: 395 YALLLISSSNQVALKRKSATIEESDIRRVYELFLDQKRSVEYLEEYGKNYITENEWSASG 454
Query: 400 SQ 401
+Q
Sbjct: 455 AQ 456
Score = 79.4 bits (187), Expect = 8e-16
Identities = 34/50 (68%), Positives = 47/50 (94%)
Query: 15 ITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIRE 64
++++ERIGAHSHI+G+GL+D+LEP++ SQGMVGQ AR+AAGVIL+MI+E
Sbjct: 11 VSKLERIGAHSHIKGIGLNDNLEPKESSQGMVGQVKARRAAGVILKMIQE 60
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 232 bits (568), Expect = 6e-62
Identities = 124/292 (42%), Positives = 182/292 (62%), Gaps = 10/292 (3%)
Query: 101 LTLKTTDMETNYDMGAQMIDSLLKEKVQAGDVITIDKATGKINKLGRSFARARDYDATGQ 160
L LKT + + +SL +E+V GDVI I+ TG + ++GRS A A ++D +
Sbjct: 160 LGLKTHKGTKQLKLDPSIYESLQREQVSTGDVIYIEANTGAVKRVGRSDAYATEFDLEAE 219
Query: 161 QARFVQCPEGELQKRKEVVHTVTLHEVDVINSRTHGFLALFS-------GDTGEIKSEIR 213
+ +V P+GE+ KRKE+V VTLH++D+ N+R G + S EI ++R
Sbjct: 220 E--YVPMPKGEVHKRKEIVQDVTLHDLDIANARPQGGQDIMSMMGQLMKPKKTEITDKLR 277
Query: 214 EQINSKVAEWREEGKAEMIPGVLFIDEAHMLDIECFSFLNRALESETAPIVIMATNXXX- 272
+IN V ++ E+G AE+IPGVLFIDE HMLDIECF++LN+ALES +PIVI A+N
Sbjct: 278 GEINKVVNKYIEQGIAELIPGVLFIDEVHMLDIECFTYLNQALESTISPIVIFASNRGIC 337
Query: 273 XXXXXXXYRSPHGIPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTR 332
++PHGIP DLLDR++IV T PYS+SE++ IL IR + E+ ++ + L L +
Sbjct: 338 TIRGTEDIQAPHGIPTDLLDRLLIVRTLPYSESEIRSILQIRAKVENIILTDECLDKLAQ 397
Query: 333 VATETSLRYAIQLITTASLVAKRRKAAEVSMEDVKKVYSLFLDEHRSEQFLK 384
+ TSLRY IQL+T S++A E+ ++D+++ LFLD RS Q +K
Sbjct: 398 EGSRTSLRYVIQLLTPVSIIASLHGNKEIGVQDIEECNDLFLDARRSAQVVK 449
Score = 52.8 bits (121), Expect = 8e-08
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 8 QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIREVK 66
Q+ EV+ R RI HSHI+GLGL + V G +GQ+ AR+A G+I +I+ K
Sbjct: 3 QISEVKGNGRDNRITTHSHIKGLGLKEDGTCESVGGGFIGQEKAREACGIITDLIKSKK 61
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 27.1 bits (57), Expect = 4.8
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 112 YDMGAQMIDSLLKEKVQAGDVITIDKATGK-INKLGRSFARARD-YDATGQQARFVQCP 168
Y + + D LK+KV A D T+DKA + I L + A+D ++A ++ V P
Sbjct: 545 YSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANP 603
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 26.6 bits (56), Expect = 6.3
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 335 TETSLRYAIQLITTASLVAKRRKAAEVSMEDVKKVYSLFLDEHRSEQFLKEYQDEFMFND 394
T SL+ + ++S+V K+ E S D + S +E + + + + +D+ +FND
Sbjct: 866 TTQSLQMQSNSVNSSSMV-DASKSKEKSGGDTSALDSNAKNEPTAAKPISKLEDDALFND 924
Query: 395 GSGDA 399
+G+A
Sbjct: 925 SAGNA 929
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 288 LDLLDRMIIVATSPYSQSELKDILNIR 314
LDLLD+ TSP S E K +L ++
Sbjct: 217 LDLLDQSDFSLTSPSSAKEFKQLLTLK 243
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 200 LFSGDTGEIK--SEIREQINSKVAEWREEGKAEMIPGVLFIDEAHML 244
L S D G + S+ R + ++ +E + P +LF+DE H+L
Sbjct: 240 LLSLDVGSLVAGSKFRGEFEERIKSVLKEVEESETPIILFVDEMHLL 286
>SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 7 AQVQEVRSITRIERIGAHSHIRGLGLDD 34
A +++V T I+ +G HSHIR + D
Sbjct: 252 ASIRKVHPNTPIQILGGHSHIRDFAVYD 279
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.131 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,390,395
Number of Sequences: 5004
Number of extensions: 48091
Number of successful extensions: 133
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 121
Number of HSP's gapped (non-prelim): 11
length of query: 408
length of database: 2,362,478
effective HSP length: 74
effective length of query: 334
effective length of database: 1,992,182
effective search space: 665388788
effective search space used: 665388788
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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