GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001801-TA|BGIBMGA001801-PA|IPR010339|TIP49, C-terminal
         (408 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    25   3.7  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   4.9  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     24   8.6  

>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 12/49 (24%), Positives = 24/49 (48%)

Query: 191 NSRTHGFLALFSGDTGEIKSEIREQINSKVAEWREEGKAEMIPGVLFID 239
           +S T  F         +I+  +RE+IN  +AE   E   +++  + ++D
Sbjct: 319 SSTTQSFCLYELAKNPDIQERLREEINRAIAENGGEVTYDVVMNIKYLD 367


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 4.9
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 143 NKLGRSFARARDYDATGQQA-RFV------QCPEGELQKRKEVVHTVTLHEVDVI 190
           +K GR+  + R Y     Q+ R V      +C + E Q +++  HTV  H VD +
Sbjct: 147 HKWGRNTGKPRGYQQQQSQSHRQVVIGTQQECLQPEQQHQRQQQHTVRRHNVDKV 201


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 23.8 bits (49), Expect = 8.6
 Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 2/74 (2%)

Query: 316 EEEDCQMSADALTVLTRVATETSLRYAIQLITTASLVAKR--RKAAEVSMEDVKKVYSLF 373
           E++   M  D  + +   +TE +  +      T +L+ +   +K+    +E+VK+V  LF
Sbjct: 238 EDKIVAMVTDNASNMKAASTELNFCHIPCFAHTLNLIVRDAIKKSVLPVVEEVKRVVMLF 297

Query: 374 LDEHRSEQFLKEYQ 387
               ++ Q L + Q
Sbjct: 298 KKSPKASQMLADTQ 311


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.131    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 311,448
Number of Sequences: 2123
Number of extensions: 10531
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 3
length of query: 408
length of database: 516,269
effective HSP length: 66
effective length of query: 342
effective length of database: 376,151
effective search space: 128643642
effective search space used: 128643642
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)