Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001799-TA|BGIBMGA001799-PA|IPR014001|DEAD-like
helicases, N-terminal, IPR001650|Helicase, C-terminal,
IPR014021|Helicase superfamily 1 and 2 ATP-binding, IPR014014|DEAD-box
RNA helicase Q motif, IPR011545|DEAD/DEAH box helicase, N-terminal
(620 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 841 0.0
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 648 0.0
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 637 0.0
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 617 e-175
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 602 e-171
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 593 e-168
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 464 e-129
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 425 e-117
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 425 e-117
UniRef50_Q803D3 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 312 1e-83
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 283 1e-74
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 279 2e-73
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 277 8e-73
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 277 8e-73
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 273 1e-71
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 272 1e-71
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 272 2e-71
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 270 6e-71
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 270 7e-71
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 269 1e-70
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 269 2e-70
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 268 2e-70
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 267 5e-70
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 266 9e-70
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 266 2e-69
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 264 4e-69
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 263 1e-68
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 262 2e-68
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 262 3e-68
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 262 3e-68
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 261 3e-68
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 261 4e-68
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 259 1e-67
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 258 2e-67
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 258 3e-67
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 258 4e-67
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 258 4e-67
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 257 6e-67
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 256 1e-66
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 256 2e-66
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 255 2e-66
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 254 4e-66
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 253 9e-66
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 252 3e-65
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 251 4e-65
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 251 4e-65
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 251 5e-65
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 250 6e-65
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 250 8e-65
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 250 8e-65
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 249 1e-64
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 249 1e-64
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 249 2e-64
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 248 3e-64
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 248 3e-64
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 248 4e-64
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 247 6e-64
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 247 6e-64
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 246 1e-63
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 246 1e-63
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 246 1e-63
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 246 2e-63
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 245 3e-63
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 244 6e-63
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 244 7e-63
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 243 1e-62
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 243 1e-62
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 242 2e-62
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 241 4e-62
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 241 5e-62
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 241 5e-62
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 240 7e-62
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 240 7e-62
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 240 9e-62
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 240 9e-62
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 240 9e-62
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 239 2e-61
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 239 2e-61
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 238 3e-61
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 238 3e-61
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 238 4e-61
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 237 6e-61
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 237 8e-61
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 237 8e-61
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 236 1e-60
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 236 1e-60
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 236 1e-60
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 235 2e-60
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 235 2e-60
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 235 2e-60
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 235 3e-60
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 235 3e-60
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 235 3e-60
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 234 4e-60
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 234 4e-60
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 234 4e-60
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 234 6e-60
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 234 6e-60
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 234 6e-60
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 234 6e-60
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 233 8e-60
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 233 1e-59
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 232 2e-59
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 232 2e-59
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 232 2e-59
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 232 2e-59
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 232 2e-59
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 232 2e-59
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 231 4e-59
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 230 7e-59
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 230 1e-58
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 230 1e-58
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 229 1e-58
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 229 1e-58
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 229 2e-58
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 229 2e-58
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 229 2e-58
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 229 2e-58
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 228 3e-58
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 228 3e-58
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 228 4e-58
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 228 4e-58
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 227 5e-58
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 227 5e-58
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 227 5e-58
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 227 7e-58
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 227 9e-58
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 227 9e-58
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 225 3e-57
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 225 3e-57
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 225 4e-57
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 225 4e-57
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 223 8e-57
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 223 8e-57
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 223 1e-56
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 223 1e-56
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 223 1e-56
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 223 1e-56
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 222 2e-56
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 222 2e-56
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 222 2e-56
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 222 3e-56
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 222 3e-56
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 222 3e-56
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 221 3e-56
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 221 3e-56
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 219 1e-55
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 219 1e-55
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 219 1e-55
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 219 2e-55
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 219 2e-55
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 219 2e-55
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 219 2e-55
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 218 3e-55
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 218 3e-55
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 218 4e-55
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 217 5e-55
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 217 5e-55
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 217 7e-55
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 217 7e-55
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 217 1e-54
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 217 1e-54
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 216 1e-54
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 216 2e-54
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 216 2e-54
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 215 2e-54
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 215 2e-54
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 215 2e-54
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 215 2e-54
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 215 3e-54
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 215 4e-54
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 214 5e-54
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 214 5e-54
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 214 5e-54
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 214 5e-54
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 214 7e-54
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 213 9e-54
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 213 9e-54
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 213 1e-53
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 213 1e-53
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 213 1e-53
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 213 2e-53
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 212 3e-53
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 211 4e-53
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 211 4e-53
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 211 4e-53
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 211 4e-53
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 211 5e-53
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 210 6e-53
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 210 8e-53
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 210 8e-53
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 209 2e-52
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 209 2e-52
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 208 3e-52
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 208 3e-52
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 208 4e-52
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 208 4e-52
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 207 6e-52
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 207 6e-52
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 207 6e-52
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 207 8e-52
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 207 8e-52
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 206 1e-51
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 206 1e-51
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 206 1e-51
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 206 1e-51
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 206 1e-51
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 206 1e-51
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 206 2e-51
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 206 2e-51
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 205 2e-51
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 205 2e-51
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 205 3e-51
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 204 4e-51
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 204 4e-51
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 204 4e-51
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 204 5e-51
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 204 5e-51
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 204 7e-51
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 204 7e-51
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 203 1e-50
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 203 1e-50
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 203 1e-50
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 202 2e-50
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 202 2e-50
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 202 2e-50
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 202 2e-50
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 202 2e-50
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 202 2e-50
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 202 2e-50
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 202 2e-50
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 202 2e-50
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 202 2e-50
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 202 3e-50
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 202 3e-50
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 201 4e-50
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 201 4e-50
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 201 5e-50
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 201 5e-50
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 201 5e-50
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 201 5e-50
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 200 7e-50
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 200 7e-50
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 200 7e-50
UniRef50_A4RUB4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 200 7e-50
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 200 9e-50
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 200 9e-50
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 200 9e-50
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 200 9e-50
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 200 1e-49
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 200 1e-49
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 199 2e-49
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 199 2e-49
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 199 2e-49
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 198 3e-49
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 198 3e-49
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 198 3e-49
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 198 3e-49
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 198 4e-49
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 198 4e-49
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 198 4e-49
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 198 4e-49
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 198 5e-49
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 198 5e-49
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 197 6e-49
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 197 6e-49
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 197 6e-49
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 197 6e-49
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 197 6e-49
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 197 6e-49
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 197 6e-49
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 197 8e-49
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 196 1e-48
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 196 1e-48
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 196 1e-48
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 196 1e-48
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 196 1e-48
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 196 1e-48
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 196 1e-48
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 196 2e-48
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 196 2e-48
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 195 3e-48
UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Duges... 195 3e-48
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 195 3e-48
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 195 3e-48
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 195 3e-48
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 194 4e-48
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 194 4e-48
UniRef50_Q84TG1 Cluster: DEAD-box ATP-dependent RNA helicase 57;... 194 4e-48
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 194 8e-48
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 194 8e-48
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 193 1e-47
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 193 1e-47
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 193 1e-47
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 193 1e-47
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 193 1e-47
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 192 2e-47
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 192 2e-47
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 192 2e-47
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 192 2e-47
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 192 3e-47
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 192 3e-47
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 192 3e-47
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 191 4e-47
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 191 4e-47
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 191 5e-47
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 190 7e-47
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 190 7e-47
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 190 7e-47
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 190 7e-47
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 190 1e-46
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 190 1e-46
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 190 1e-46
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 190 1e-46
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 190 1e-46
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 189 2e-46
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 189 2e-46
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 189 2e-46
UniRef50_Q6CDS6 Cluster: ATP-dependent RNA helicase ROK1; n=1; Y... 189 2e-46
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 189 2e-46
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 189 2e-46
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 189 2e-46
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 189 2e-46
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 189 2e-46
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 189 2e-46
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 189 2e-46
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 188 3e-46
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 188 3e-46
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 188 3e-46
UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase... 188 3e-46
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 188 4e-46
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 188 4e-46
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 188 4e-46
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 188 5e-46
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 188 5e-46
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 188 5e-46
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 188 5e-46
UniRef50_Q4P559 Cluster: Putative uncharacterized protein; n=1; ... 188 5e-46
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 187 7e-46
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 187 7e-46
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 187 7e-46
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 187 7e-46
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 187 9e-46
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 187 9e-46
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 186 1e-45
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 186 1e-45
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 186 2e-45
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 186 2e-45
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 186 2e-45
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 186 2e-45
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 186 2e-45
UniRef50_A0CM98 Cluster: Chromosome undetermined scaffold_21, wh... 186 2e-45
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 185 3e-45
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 185 3e-45
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 185 4e-45
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 185 4e-45
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 185 4e-45
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 185 4e-45
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 185 4e-45
UniRef50_A5DIX5 Cluster: ATP-dependent RNA helicase ROK1; n=2; P... 185 4e-45
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 184 5e-45
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 184 5e-45
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 184 6e-45
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 184 6e-45
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 184 6e-45
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 184 8e-45
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 184 8e-45
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 184 8e-45
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 183 1e-44
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 183 1e-44
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 183 1e-44
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA... 183 1e-44
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 182 2e-44
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 182 2e-44
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 182 2e-44
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 182 2e-44
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 182 2e-44
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 182 2e-44
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 182 2e-44
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 182 3e-44
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 182 3e-44
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 182 3e-44
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 182 3e-44
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 182 3e-44
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 182 3e-44
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 181 4e-44
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 181 4e-44
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 181 6e-44
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 181 6e-44
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 181 6e-44
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 181 6e-44
UniRef50_P45818 Cluster: ATP-dependent RNA helicase ROK1; n=11; ... 181 6e-44
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 181 6e-44
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 180 8e-44
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 180 1e-43
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 180 1e-43
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 180 1e-43
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 180 1e-43
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 180 1e-43
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 179 2e-43
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 179 2e-43
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 179 2e-43
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 178 3e-43
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 178 3e-43
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 178 3e-43
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 178 4e-43
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 177 5e-43
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 177 7e-43
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 177 7e-43
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 177 9e-43
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 177 9e-43
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 177 9e-43
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 177 9e-43
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 176 1e-42
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 176 1e-42
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 176 1e-42
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 176 1e-42
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 176 1e-42
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 176 2e-42
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 176 2e-42
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 176 2e-42
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 176 2e-42
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 175 2e-42
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 175 2e-42
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 175 2e-42
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 175 3e-42
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 175 3e-42
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 175 3e-42
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 175 4e-42
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 175 4e-42
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 174 5e-42
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 174 7e-42
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 173 9e-42
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 173 1e-41
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 173 2e-41
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 173 2e-41
UniRef50_Q22LR2 Cluster: Type III restriction enzyme, res subuni... 172 2e-41
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 172 2e-41
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 172 3e-41
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 172 3e-41
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 172 3e-41
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 171 4e-41
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 171 4e-41
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 171 5e-41
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 171 5e-41
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 170 8e-41
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 170 8e-41
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 170 8e-41
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 170 8e-41
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 170 8e-41
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 170 1e-40
UniRef50_O76743 Cluster: ATP-dependent RNA helicase glh-4; n=2; ... 170 1e-40
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 169 1e-40
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 169 1e-40
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 169 1e-40
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 169 2e-40
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 169 3e-40
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 169 3e-40
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 169 3e-40
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 168 3e-40
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 168 4e-40
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 168 4e-40
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 168 4e-40
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 168 4e-40
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 167 6e-40
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 167 6e-40
UniRef50_Q8IJ90 Cluster: Putative uncharacterized protein; n=1; ... 167 6e-40
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 167 6e-40
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 167 8e-40
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 167 8e-40
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 167 8e-40
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 167 8e-40
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 166 1e-39
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 166 1e-39
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 166 2e-39
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 166 2e-39
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 166 2e-39
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 166 2e-39
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 165 2e-39
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 165 2e-39
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 165 3e-39
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 165 3e-39
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 165 3e-39
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 165 3e-39
UniRef50_Q9VVK8 Cluster: CG5589-PA; n=12; Eumetazoa|Rep: CG5589-... 165 4e-39
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 164 5e-39
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 164 7e-39
UniRef50_A4RXX8 Cluster: Predicted protein; n=1; Ostreococcus lu... 164 7e-39
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 163 9e-39
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 163 1e-38
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 163 1e-38
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 163 1e-38
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 163 2e-38
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 162 2e-38
UniRef50_Q9FLB0 Cluster: DEAD-box ATP-dependent RNA helicase 18;... 162 2e-38
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 162 3e-38
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 162 3e-38
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 162 3e-38
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 162 3e-38
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 162 3e-38
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 841 bits (2081), Expect = 0.0
Identities = 410/617 (66%), Positives = 475/617 (76%), Gaps = 11/617 (1%)
Query: 14 IKRYRREEKSDSDEDVDN--YEPYVPIKEXXXXXXXXXXXXXXXTAEAAADTKSSSENDH 71
+KRYRR KS + D+DN Y PYVP+KE +E A KSSSEN++
Sbjct: 4 VKRYRRSSKSSEEGDLDNEDYVPYVPVKERKKQHMIKLGRIVQLVSETA-QPKSSSENEN 62
Query: 72 DDETSQ----EEWGRRYNVSLLDQHXXXXXXXXXXXXXXXXXXXXEEEHILESVAQSKAL 127
+D++ E WGR+YN+SLLDQH EEE I+ES+AQ KAL
Sbjct: 63 EDDSQGAHDVETWGRKYNISLLDQHTELKKIAEAKKLSAVEKQLREEEKIMESIAQQKAL 122
Query: 128 MGVAELAKGIQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHM 187
MGVAELAKGIQYE+PIKT+W+PPR I E+ E E +R++LRILVEG+ P PPIR+F+ M
Sbjct: 123 MGVAELAKGIQYEQPIKTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREM 182
Query: 188 KFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQ 247
KFPKGIL GL AKGI+ PTPIQVQG+P VL GRD+IGIAFTGSGKTLVF LP+IMF LEQ
Sbjct: 183 KFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQ 242
Query: 248 EVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSEC 307
E +PF RNEGPYGLIICPSRELAKQTH+IIQH+ +HL+ G PEIRSCLA+GG+ VSE
Sbjct: 243 EYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEA 302
Query: 308 MEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFA 367
++V+ +GVHI+VATPGRLMDMLDKK++ L++CRYLCMDEADRMIDMGFEEDVRTIFS+F
Sbjct: 303 LDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFK 362
Query: 368 GQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLH 427
GQRQTLLFSATMPKKIQNFARSALV+PVT+NVGRAGAAS+ V Q +E + EA+ V LL
Sbjct: 363 GQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYVKQEAKVVYLLD 422
Query: 428 CLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVL 487
CLQKT PP LIFAE+KQDVD +HEYLLLKGVEAVAIHGGKDQEERSRAV+A+R G+KDVL
Sbjct: 423 CLQKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVL 482
Query: 488 VATDVASKGLDFANIQHVINYDMPEDIENYVHRI-XXXXXXXXXXXXXXXXXXPDHSVLR 546
VATDVASKGLDF N+QHVINYDMP+DIENYVHRI + SVL
Sbjct: 483 VATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLL 542
Query: 547 DLVHLLREAGQRVPGFLLDMLGEPD---VPAPAGQGCSYCAGLGHRITECPKLEAVQNKQ 603
DL HLL E Q VP FL ++ E + + GC+YC GLGHRITECPKLEAVQNKQ
Sbjct: 543 DLKHLLIEGKQEVPDFLDELAPETEHQHLDLGDSHGCTYCGGLGHRITECPKLEAVQNKQ 602
Query: 604 ASNIGRRDYLANTAADY 620
ASNIGRRDYL+NTAADY
Sbjct: 603 ASNIGRRDYLSNTAADY 619
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 648 bits (1602), Expect = 0.0
Identities = 317/477 (66%), Positives = 371/477 (77%), Gaps = 2/477 (0%)
Query: 146 SWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKP 205
SW PPR IL +P+ + E IR K ILVEGDD PPP++TF+ MKFP+ IL L+ KGI P
Sbjct: 11 SWTPPRYILHMPKEKIERIRKKWHILVEGDDIPPPVKTFKEMKFPRPILAALKKKGITHP 70
Query: 206 TPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIIC 265
TPIQVQG+PAVL GRDMIGIAFTGSGKTLVFTLPIIMF LEQE MPF RNEGPYG+I+
Sbjct: 71 TPIQVQGLPAVLTGRDMIGIAFTGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIVV 130
Query: 266 PSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRL 325
PSRELA+QT ++I HF R L+ G P +R+ L IGG ++ E + +++GVH++VATPGRL
Sbjct: 131 PSRELARQTFEVITHFSRALEAHGFPSLRTNLCIGGSSIKEQSDAMKRGVHMVVATPGRL 190
Query: 326 MDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQN 385
MD+LDK+++ L+VCRYL +DEADRMIDMGFEEDVRTIFSYF QRQTLLFSATMPKKIQN
Sbjct: 191 MDLLDKRIITLDVCRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQN 250
Query: 386 FARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPPTLIFAERKQD 445
FA+SALV+PVTVNVGRAGAASL V Q++E + EA+ V LL CLQKTPPP LIFAE+K D
Sbjct: 251 FAKSALVKPVTVNVGRAGAASLDVIQEVEYVKQEAKVVYLLECLQKTPPPVLIFAEKKSD 310
Query: 446 VDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHV 505
VD +HEYLLLKGVEAVAIHG K QEER A+ F +G KDVLVATDVASKGLDF +IQHV
Sbjct: 311 VDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHV 370
Query: 506 INYDMPEDIENYVHRIXXXXX-XXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVP-GFL 563
IN+DMPEDIENYVHRI + SVL DL HLL EA Q++
Sbjct: 371 INFDMPEDIENYVHRIGRTGRCGKTGVATTFINKSCEESVLLDLKHLLMEAKQKITRARS 430
Query: 564 LDMLGEPDVPAPAGQGCSYCAGLGHRITECPKLEAVQNKQASNIGRRDYLANTAADY 620
L + E + +GC+YC GLGHRITECPKLEA+Q+KQA NIGRRDYLA +AD+
Sbjct: 431 LQVDNEEYLGIGDERGCAYCGGLGHRITECPKLEALQSKQAGNIGRRDYLAAGSADW 487
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 637 bits (1573), Expect = 0.0
Identities = 315/461 (68%), Positives = 358/461 (77%), Gaps = 6/461 (1%)
Query: 13 PIKRYRRE-EKSDSDE--DVDNYEPYVPIKEXXXXXXXXXXXXXXXTAEAAADT-KSSSE 68
P+KRYRR+ EK + DE D+Y PYVP+K + T KSSSE
Sbjct: 4 PVKRYRRDDEKEEKDELESDDDYVPYVPVKIRKKQQLIKLGRLGQIKEDGTHGTGKSSSE 63
Query: 69 NDHD--DETSQEEWGRRYNVSLLDQHXXXXXXXXXXXXXXXXXXXXEEEHILESVAQSKA 126
N+ D D+ + WGR+ N+SLLDQH EEE ILESVA++KA
Sbjct: 64 NERDEGDDEDIQVWGRKSNISLLDQHTELKKLAEAKKESAMEKQLKEEEKILESVAENKA 123
Query: 127 LMGVAELAKGIQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQH 186
LMGVAELAKGI+Y +PIKTSWRPPR IL RHE IR K I VEG+D PPP+R+F+
Sbjct: 124 LMGVAELAKGIEYTDPIKTSWRPPRTILTKDNVRHERIRRKFGITVEGEDVPPPLRSFKE 183
Query: 187 MKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLE 246
MKF KGIL GLE KGI KPTPIQVQG+PAVL+GRD+IGIAFTGSGKTLVF LP+IMFCLE
Sbjct: 184 MKFHKGILLGLEQKGITKPTPIQVQGIPAVLSGRDIIGIAFTGSGKTLVFVLPLIMFCLE 243
Query: 247 QEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSE 306
QEV +PF RNEGPYGLIICPSRELAKQT+DIIQH+ L+ PEIR CLAIGGV VSE
Sbjct: 244 QEVALPFGRNEGPYGLIICPSRELAKQTYDIIQHYTNSLRHHHCPEIRCCLAIGGVPVSE 303
Query: 307 CMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYF 366
++V+ +GVHIMVATPGRLMDMLDKKMV+L VCRYLCMDEADRMIDMGFEEDVRTIFS+F
Sbjct: 304 SLDVISRGVHIMVATPGRLMDMLDKKMVKLGVCRYLCMDEADRMIDMGFEEDVRTIFSFF 363
Query: 367 AGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLL 426
GQRQTLLFSATMPKKIQNFARSALV+PVT+NVGRAGAAS+ V Q++E + EA+ V LL
Sbjct: 364 EGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVIQEVEYVKQEAKIVYLL 423
Query: 427 HCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGK 467
CL+KTPPP LIFAE+KQDVDA+HEYLLLKGVEAVAIHGGK
Sbjct: 424 ECLKKTPPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGK 464
Score = 153 bits (371), Expect = 1e-35
Identities = 75/121 (61%), Positives = 84/121 (69%), Gaps = 3/121 (2%)
Query: 503 QHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXP-DHSVLRDLVHLLREAGQRVPG 561
QHVINYDMP+D+ENYVHRI D SVL DL HLLREA Q++P
Sbjct: 474 QHVINYDMPDDVENYVHRIGRTGRSGHTGTATTFINKANDESVLLDLKHLLREAKQKIPP 533
Query: 562 FLLDMLGEPDVPAPAG--QGCSYCAGLGHRITECPKLEAVQNKQASNIGRRDYLANTAAD 619
FLL++ E + G QGCSYC GLGHRITECPKLEA+QNKQASNIGRRDYLA+ AAD
Sbjct: 534 FLLELCSENEKYLNVGDEQGCSYCGGLGHRITECPKLEAIQNKQASNIGRRDYLASNAAD 593
Query: 620 Y 620
Y
Sbjct: 594 Y 594
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 617 bits (1525), Expect = e-175
Identities = 298/506 (58%), Positives = 372/506 (73%), Gaps = 7/506 (1%)
Query: 113 EEEHILESVAQSKALMGVAELAKGIQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILV 172
+E+ ++E ++ K LM V ELAKGI Y +P+KT W+PP + +P + + +R K ILV
Sbjct: 113 QEKEMIEHLSDRKTLMSVRELAKGITYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILV 172
Query: 173 EGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGK 232
+GDD PPP R F+ ++ P+ +LR L KGI +PTPIQVQG+P VL+GRDMIGIAFTGSGK
Sbjct: 173 DGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGK 232
Query: 233 TLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPE 292
TLVF LP+IM L++E+ MP + EGP+G+IICPSRELAKQT+D+I+ F+ LK G PE
Sbjct: 233 TLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPE 292
Query: 293 IRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMID 352
IR L IGGV + ++VV+KGVHI+VATPGRL D+L KK + L+ CRYL +DEADR++D
Sbjct: 293 IRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVD 352
Query: 353 MGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQD 412
+GFE+D+R +F +F QRQTLLFSATMPKKIQNFA+SALV+PV VNVGRAGAA+L V Q+
Sbjct: 353 LGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQE 412
Query: 413 LEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEER 472
+E + +AR + LL CLQKTPPP L+F E K DVD +HEYLLLKGVEAVAIHGGKDQEER
Sbjct: 413 VEYVKEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEER 472
Query: 473 SRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXX-XXXXX 531
A+E F+ G+KDVLVATDVASKGLDF +IQHVINYDMP +IENYVHRI
Sbjct: 473 ENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGI 532
Query: 532 XXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLL---DMLGEPDVPAPAG--QGCSYCAGL 586
+ L DL HLL+EA QR+P L D L + + A +GC+YC GL
Sbjct: 533 ATTFINKNQTETTLLDLKHLLKEAKQRIPPVLAELNDPLEDEETMAKESGVKGCAYCGGL 592
Query: 587 GHRITECPKLEAVQNKQASNIGRRDY 612
GHR+T+CPKLE Q A RRDY
Sbjct: 593 GHRVTDCPKLEH-QKSMAIAGSRRDY 617
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 602 bits (1487), Expect = e-171
Identities = 292/509 (57%), Positives = 370/509 (72%), Gaps = 7/509 (1%)
Query: 113 EEEHILESVAQSKALMGVAELAKGIQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILV 172
+E+ ++E ++ K LM V ELAKGI Y EP+ T W+PP I ++ + ++IR + I+V
Sbjct: 77 QEKEMMEHLSDKKTLMSVRELAKGITYTEPLLTGWKPPLHIRKMSSKQRDLIRKQWHIIV 136
Query: 173 EGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGK 232
GDD PPPI+ F+ MKFP+ +L L+ KGI +PTPIQVQG+P +L GRDMIGIAFTGSGK
Sbjct: 137 NGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGK 196
Query: 233 TLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPE 292
TLVF LP+IM L++E+ MP EGP GLI+CPSRELA+QT+++++ F+ L G P
Sbjct: 197 TLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPP 256
Query: 293 IRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMID 352
+RS L IGG+ + +EVV++GVHI+VATPGRL DML KK + L+ CRYL +DEADR++D
Sbjct: 257 LRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVD 316
Query: 353 MGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQD 412
+GFE+D+R +F +F QRQTLLFSATMP KIQ FARSALV+PVTVNVGRAGAA+L V Q+
Sbjct: 317 LGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQE 376
Query: 413 LEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEER 472
+E + EA+ V LL CLQKT PP LIF E K DVD +HEYLLLKGVEAVAIHGGKDQE+R
Sbjct: 377 VEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDR 436
Query: 473 SRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXX-XXXXX 531
A+ +F+ G+KDVLVATDVASKGLDF +IQHVINYDMP +IENYVHRI
Sbjct: 437 EYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGI 496
Query: 532 XXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLL---DMLGEPDVPAPAG--QGCSYCAGL 586
+ L DL HLL+EA QR+P L D + E + A A +GC+YC GL
Sbjct: 497 ATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEEAETIANASGVKGCAYCGGL 556
Query: 587 GHRITECPKLEAVQNKQASNIGRRDYLAN 615
GHRI +CPKLE ++ SN R+DY +
Sbjct: 557 GHRIRDCPKLEHQKSVAISN-SRKDYFGS 584
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 593 bits (1465), Expect = e-168
Identities = 290/503 (57%), Positives = 364/503 (72%), Gaps = 6/503 (1%)
Query: 113 EEEHILESVAQSKALMGVAELAKGIQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILV 172
EEE +L+ V + L+ VAEL KG +YEEPI T+WRPP I + +E+ R +L I
Sbjct: 120 EEEELLDKVTRGGGLLAVAELTKGEKYEEPIVTAWRPPGHIRRQSQEDYEIQRKRLGISC 179
Query: 173 EGDDPPPPIRTFQHMKFPKGILRGLEA-KGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSG 231
EGD PPPI +F MKFPK +L ++ KGI PT IQ+QG+P L+GRDMIGIA TGSG
Sbjct: 180 EGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSG 239
Query: 232 KTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSP 291
KT+ F LP++MFCLEQE+K+PF+R+EGP+GLII PSRELA+Q D+I L G P
Sbjct: 240 KTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLP 299
Query: 292 EIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMI 351
E+R+ L IGGV + E + V+ G+HI+VATPGRL DML KK++ L VCRYL +DEADRM+
Sbjct: 300 EMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRML 359
Query: 352 DMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQ 411
DMGFE+++++IF +F QRQTLLFSATMP+KIQ FA+SALV+P+ VNVGRAGAASL V Q
Sbjct: 360 DMGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAGAASLNVLQ 419
Query: 412 DLEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEE 471
+LE + E + V++L CLQKT P LIFAE+K DVD ++EYLL+KGVE +IHGGKDQ +
Sbjct: 420 ELEFVRSENKLVRVLECLQKTSPKVLIFAEKKVDVDNIYEYLLVKGVEVASIHGGKDQSD 479
Query: 472 RSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI-XXXXXXXXX 530
R +EAFR+ EKDVLVATDVASKGLDF I+HVIN+DMPEDIENYVHRI
Sbjct: 480 RHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSGRKG 539
Query: 531 XXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGEPDVPAPAG----QGCSYCAGL 586
+ SVL DL LL EAGQ +P FL + G+ + APAG +GC+YC+GL
Sbjct: 540 LATTFINKKSEMSVLSDLKQLLAEAGQELPEFLKMLAGDEEGTAPAGTNAEKGCAYCSGL 599
Query: 587 GHRITECPKLEAVQNKQASNIGR 609
GHRIT+CPKL + NK + R
Sbjct: 600 GHRITDCPKLAGIGNKTTQALAR 622
>UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 566
Score = 464 bits (1143), Expect = e-129
Identities = 216/461 (46%), Positives = 315/461 (68%), Gaps = 5/461 (1%)
Query: 147 WRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPT 206
WRP + + + + I K I++EG+DPPPPI++FQ ++ IL+ L I+KPT
Sbjct: 82 WRPKKKQRLWDQYKIDKILKKYSIMIEGNDPPPPIKSFQDLRVDHRILKILSKMKIKKPT 141
Query: 207 PIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICP 266
PIQ+QG+PAVL GRD+IG+A +G GKTLVF LP ++ C+E+E+KMP IR EGP+ LI+ P
Sbjct: 142 PIQMQGLPAVLMGRDIIGVAPSGQGKTLVFLLPALLQCIEEEMKMPVIRGEGPFALILLP 201
Query: 267 SRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLM 326
S ELA T+++ + + + + G P I L IGG+ +S ++ ++ GVHI++ TPGR+
Sbjct: 202 SHELAILTYELAKQYCQKFQKKGFPAIHCLLGIGGMDMSSQLQSIRNGVHIVIGTPGRIS 261
Query: 327 DMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNF 386
DM++KK + +++CR++ +DEADRM+D FE ++R I +F G RQT+LFSAT+PKKIQ F
Sbjct: 262 DMVNKKKINMDLCRFIVLDEADRMLDQVFELEIRNILEHFTGPRQTMLFSATLPKKIQEF 321
Query: 387 ARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDV 446
+ LV P+ +NVGR+G +L V Q++ + E + LL CL+KT PP +IF+E + DV
Sbjct: 322 TKQTLVDPLVINVGRSGQINLNVIQEILYVKQEEKLHYLLDCLKKTTPPVVIFSEHQNDV 381
Query: 447 DAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVI 506
D ++EYLL+KGVE V +HGGK QE+R++A++ F G+KDVLVATDVA+KGLDF +I+HVI
Sbjct: 382 DDINEYLLIKGVEVVGLHGGKQQEDRTKALKQFLNGQKDVLVATDVAAKGLDFPDIKHVI 441
Query: 507 NYDMPEDIENYVHRI-XXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLD 565
NYDMP+DIE+Y+HRI + S+L DL +LL E+ Q++P FL
Sbjct: 442 NYDMPKDIESYIHRIGRTGRQGKTGRATTFVNRQQEESILLDLKYLLVESKQKIPQFLEK 501
Query: 566 MLGEPDVPAPAGQGCSYCAGLGHRITECPKLEAVQNKQASN 606
+ + D+ C YC G+GHR+ CPKLE + + +N
Sbjct: 502 LKSDEDL----NGSCGYCDGMGHRMANCPKLEKQKMRILTN 538
>UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Helicase conserved C-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 602
Score = 425 bits (1048), Expect = e-117
Identities = 224/524 (42%), Positives = 323/524 (61%), Gaps = 54/524 (10%)
Query: 120 SVAQSKALMGVAELAKGIQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPP 179
+V ++ AL G+ E + Q +E +KT+WR P+ + + + + K +L+EG + PP
Sbjct: 58 TVVKNTALGGLIERKE--QIKERVKTTWRIPKAYRTVTQREIQKVLKKYSVLLEGQNTPP 115
Query: 180 PIRTFQ------------------HMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRD 221
PI++F+ MKFPK I+ L+ K ++KPTPIQ+ G+P VL GRD
Sbjct: 116 PIQSFEVNLLIAQFSHQYSLIVLKEMKFPKKIIAILKEKKVKKPTPIQMVGLPTVLLGRD 175
Query: 222 MIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHF 281
MIGIA TG GKT+VF LP ++ +E E+ MP R EGP +II PS T+++ ++
Sbjct: 176 MIGIAPTGQGKTIVFLLPALVMAIEHEMNMPLFRGEGPLAIIIVPS------TYELACYY 229
Query: 282 IRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHI----------------------MV 319
+ L+ G P+IR L+IGG+ + + + V++GVH+ MV
Sbjct: 230 SQKLQEAGYPQIRCSLSIGGMDMMQQIAQVREGVHLIKYYGLMNNTFEIYEVVELQLDMV 289
Query: 320 ATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATM 379
TPGR DM+DK+ +N+CRY+ +DEADR++DM FE+++R I + G RQTLLFS+TM
Sbjct: 290 GTPGRTSDMVDKQKFNMNLCRYIVLDEADRLLDMIFEKEIRNIIDHVPGARQTLLFSSTM 349
Query: 380 PKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPPTLIF 439
PKK+Q+FA+ AL+ P+ VNVGRAG +L V Q++E + E + L+ CLQKT PP LIF
Sbjct: 350 PKKVQDFAKQALIDPIIVNVGRAGQVNLNVIQEVEYVKQEEKLQYLISCLQKTKPPVLIF 409
Query: 440 AERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDF 499
++ DVD +HEYLLLKG++ ++HGGK QEER++A++ F++ +KDVLVATD+ +KGLDF
Sbjct: 410 CDKSNDVDDIHEYLLLKGIDVTSLHGGKKQEERTKAMKEFQQSQKDVLVATDIGAKGLDF 469
Query: 500 ANIQHVINYDMPEDIENYVHRI-XXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQR 558
N+QHVIN+DMP++IE+YVHRI D ++L DL LL EA Q
Sbjct: 470 PNVQHVINFDMPKEIESYVHRIGRTGRLGKTGRATTFVNKQQDENILSDLKMLLMEAKQP 529
Query: 559 VPGFLLDMLGEPDVPAPAGQGCSYCAGLGHRITECPKLEAVQNK 602
+P FL + + GC +C GLGH I C KLE + K
Sbjct: 530 IPHFLKQITHDSQT-----GGCGFCGGLGHTIHNCNKLEQQKMK 568
>UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2;
Theileria|Rep: RNA helicase, putative - Theileria
annulata
Length = 620
Score = 425 bits (1047), Expect = e-117
Identities = 216/473 (45%), Positives = 298/473 (63%), Gaps = 9/473 (1%)
Query: 132 ELAKGIQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPK 191
+L K Y PI + ++ P L + + IRN L I V GD PPPI F+ MK PK
Sbjct: 139 DLPKATVYGSPIDSIYKIPFKYLAVDSNVVDSIRNALLIDVSGDQVPPPILNFEDMKLPK 198
Query: 192 GILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKM 251
IL+ L K I +PT IQ+Q +P+VL GRD+IG++ TG+GKTLVF +P+IM E E+++
Sbjct: 199 PILKALNHKKIFEPTKIQMQALPSVLLGRDVIGVSSTGTGKTLVFVIPMIMQSWEIELRL 258
Query: 252 PFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVV 311
P EGP+GL+ICPSRELA Q DI ++F ++ G P++ IGG + + +
Sbjct: 259 PIESREGPFGLVICPSRELASQISDITKYFTGYIYNYGGPKLYCSCVIGGTDIKDQEFTI 318
Query: 312 QKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQ 371
+ GVH+++ATPGRL L+ +++ L CRYLC DEADR ID+GF+ ++ IF++F Q Q
Sbjct: 319 KSGVHMVIATPGRLNYFLNSRIINLTQCRYLCFDEADRTIDLGFDTEINGIFNHFNNQHQ 378
Query: 372 TLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQK 431
TLLFSATM KIQ FA+SAL P+ VNVG G+ + V+Q L E++ LL CL+K
Sbjct: 379 TLLFSATMSIKIQEFAKSALTNPILVNVGLPGSPNKNVKQLLILVPKESKLPMLLQCLKK 438
Query: 432 TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATD 491
TPPP LIF E K DV+ ++EYL+LKGVE AIHGG QEER ++ F+ +KDVL+ TD
Sbjct: 439 TPPPVLIFCENKADVEIINEYLILKGVEVSAIHGGLSQEERMESISDFKNHKKDVLIGTD 498
Query: 492 VASKGLDFANIQHVINYDMPEDIENYVHRI-XXXXXXXXXXXXXXXXXXPDHSVLRDLVH 550
VASKGLDF +I HVIN+D+P D+ENYVHRI D++ L +L
Sbjct: 499 VASKGLDFPSIHHVINFDLPRDVENYVHRIGRTGRRGERGLATTLLDGSEDNNSLGNLKS 558
Query: 551 LLREAGQRVPGFLLDMLGEPDVPAPAGQGCSYCAGLGHRITECPKLEAVQNKQ 603
+L E+ + +P FL ++ + +G GHRI++CP+ E+ NKQ
Sbjct: 559 ILIESEEEIPEFLKNIHETQE-----SRGFKEA---GHRISKCPRFESQLNKQ 603
>UniRef50_Q803D3 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 41;
n=5; Euteleostomi|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 306
Score = 312 bits (767), Expect = 1e-83
Identities = 158/299 (52%), Positives = 194/299 (64%), Gaps = 5/299 (1%)
Query: 17 YRREEKSDSDEDVDNYEPYVPIKEXXXXXXXXXXXXXXXTAEAAADTKSSSENDHDDETS 76
Y + S+ ED D+Y PYVP+K S E +DE
Sbjct: 12 YSEKSASEGSED-DDYVPYVPVKIRKQQMLQKVMRLRGKGLTEEEQKDSGGEQKDEDEGL 70
Query: 77 QEEWGRRYNVSLLDQHXXXXXXXXXXXXXXXXXXXXEEEHILESVAQSKALMGVAELAKG 136
G R NVSLLDQH EEE ILESVA+ +ALM V E+AKG
Sbjct: 71 ----GPRSNVSLLDQHQHLKEKADARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKG 126
Query: 137 IQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRG 196
I YE+PIKTSW PR IL +P RHE R K ILVEG+ P PI++F+ MKFP+ IL+G
Sbjct: 127 ITYEDPIKTSWNAPRYILSMPAVRHERARKKYHILVEGEGIPAPIKSFREMKFPQAILKG 186
Query: 197 LEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRN 256
L+ KGI PTPIQ+QG+P +L+GRDMIGIAFTGSGKTLVFTLPIIMFCLEQE ++PF +
Sbjct: 187 LKKKGIVHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEKRLPFCKR 246
Query: 257 EGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGV 315
EGPYGLIICPSRELA+QTH II+++ + L+ G+P++R L IGG++V E MEVV+ GV
Sbjct: 247 EGPYGLIICPSRELARQTHGIIEYYCKLLEDEGAPQMRCALCIGGMSVKEQMEVVKHGV 305
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 283 bits (694), Expect = 1e-74
Identities = 164/412 (39%), Positives = 230/412 (55%), Gaps = 13/412 (3%)
Query: 162 EMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRD 221
E+ R K +V G D P P+ F++ FP+ IL +EA G ++PTPIQVQ P L+GRD
Sbjct: 190 EIRRAKEITVVHGRDVPKPVVKFEYTSFPRYILSSIEAAGFKEPTPIQVQSWPIALSGRD 249
Query: 222 MIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHF 281
MIGIA TGSGKTL F LP I+ Q + P +GP L++ P+RELA+Q + F
Sbjct: 250 MIGIAETGSGKTLAFLLPAIVHINAQALLRP---GDGPIVLVLAPTRELAEQIKETALVF 306
Query: 282 IRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRY 341
R KL ++ +A GGV +++GV I++A PGRL+D L+ + L Y
Sbjct: 307 GRSSKL------KTSVAYGGVPKRFQTIALRRGVEILIACPGRLIDFLESSVTNLRRVTY 360
Query: 342 LCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVT-VNVG 400
L +DEADRM+DMGFE +R I RQTL+FSAT PK++ +RS L V VN+G
Sbjct: 361 LVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPKEVIALSRSLLSHEVVHVNIG 420
Query: 401 RAGAASL-TVRQDLEPAQPEARTVQLLHCLQKTPP--PTLIFAERKQDVDAVHEYLLLKG 457
+ + Q++ + + V+L L+K LIF+E K+ D + L L G
Sbjct: 421 SLDLTTCHNIEQNVFILEEREKRVKLKELLKKLMDGGKILIFSETKKGADTLTRELRLDG 480
Query: 458 VEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENY 517
A+ IHG K QEER+ + F+ G+ +++ATDVAS+GLD ++++VINYD P IE+Y
Sbjct: 481 WPALCIHGDKKQEERTWVLNEFKSGKHPIMIATDVASRGLDVRDVKYVINYDFPGQIEDY 540
Query: 518 VHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGE 569
VHRI R+LV L+REA Q +P L + E
Sbjct: 541 VHRIGRTGRAGMKGSSYTFLTPDKFKSARELVKLMREANQEIPPELQKLANE 592
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 279 bits (684), Expect = 2e-73
Identities = 154/411 (37%), Positives = 229/411 (55%), Gaps = 24/411 (5%)
Query: 124 SKALMGVAELAKGIQYEEPIKTSWRPPRCILEL-PETRHEMIRNKLRILVEGDDP--PPP 180
S A ++EL + + + +W+P + + P+ E++R L + V D P P
Sbjct: 60 SAATSAISEL---VTVPDTVFPNWQPSERVSRMNPDQIEEVVRLNLDVTVSSDSTAAPGP 116
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPI 240
I +F M I++ + +P+ IQ Q MP L+GRD++G A TGSGKT FT+P+
Sbjct: 117 IESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPM 176
Query: 241 IMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIG 300
+ CL V+ P R +GP L++ P+RELA+Q +Q F R L+ +++C+ +G
Sbjct: 177 LQHCL---VQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLE-----SLKNCIVVG 228
Query: 301 GVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVR 360
G + + ++ GV I VATPGR +D L + L+ Y+ +DEADRM+DMGFE +R
Sbjct: 229 GTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIR 288
Query: 361 TIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEA 420
I + QTLLFSATMP +I+ A+ L PV V VG+ + + V Q L
Sbjct: 289 EIMRSLPEKHQTLLFSATMPVEIEALAKEYLANPVQVKVGKVSSPTTNVSQTLVKVSGSE 348
Query: 421 RTVQLLHCLQKTP----------PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQE 470
+ +LL L + P T++F ERK D V E L+ +G+ AV++HGG Q
Sbjct: 349 KIDRLLDLLVEEASQAEKCGHRFPLTIVFVERKTRCDEVAEALVAQGLSAVSLHGGHSQN 408
Query: 471 ERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
ER A++ FR +LVATDVAS+GLD + HVIN D+P+ E+Y+HRI
Sbjct: 409 EREAALQNFRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRI 459
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 277 bits (678), Expect = 8e-73
Identities = 153/435 (35%), Positives = 238/435 (54%), Gaps = 17/435 (3%)
Query: 150 PRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQ 209
P + PE + R +++I V G+ P P + F+ FP ++ + G PT IQ
Sbjct: 198 PNVMARTPE-EVQAFRERMQITVMGNSVPHPSQDFEEGNFPDFVMNEINKMGFPNPTAIQ 256
Query: 210 VQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRE 269
QG P L+GRD++GIA TGSGKTL + LP I+ Q+ P R EGP L++ P+RE
Sbjct: 257 AQGWPIALSGRDLVGIAQTGSGKTLAYMLPGIVHIAHQK---PLQRGEGPVVLVLAPTRE 313
Query: 270 LAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDML 329
LA+Q +++ F H K P IR GG + +++GV +++ATPGRL+D L
Sbjct: 314 LAQQIQTVVRDFGTHSK----PLIRYTCIFGGALKGPQVRDLERGVEVVIATPGRLIDFL 369
Query: 330 DKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARS 389
++ + L C YL +DEADRM+DMGFE +R I RQ L++SAT PK++Q A
Sbjct: 370 ERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAED 429
Query: 390 ALVRPVTVNVGRAG-AASLTVRQDLEPAQPEARTVQLLHCLQKTPPPT----LIFAERKQ 444
L + +N+G +A+ + Q ++ + + +LL L++ +IF E K+
Sbjct: 430 FLHDYIQINIGSLNLSANHNIHQIVDVCEEGEKEGKLLSLLKEISSDVNSKIIIFVETKK 489
Query: 445 DVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQH 504
V+ + + ++ G A +IHG K Q ER ++ FR G+ +LVATDVA++GLD ++++
Sbjct: 490 KVEDLLKNIVRDGYGATSIHGDKSQSERDYVLQDFRHGKSTILVATDVAARGLDVEDVKY 549
Query: 505 VINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLL 564
VIN+D P E+Y+HRI + R+L+ +L EAGQ+ L+
Sbjct: 550 VINFDYPNSSEDYIHRIGRTGRCSSYGTAYTFFTPGNGRQARELLSVLEEAGQQPTAQLI 609
Query: 565 DMLGEPDVPAPAGQG 579
D+ + AP G+G
Sbjct: 610 DLAKQ----APGGKG 620
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 277 bits (678), Expect = 8e-73
Identities = 150/361 (41%), Positives = 218/361 (60%), Gaps = 13/361 (3%)
Query: 164 IRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMI 223
IR K I +EG+D P PI +F + P + L K Q PTPIQ+Q + V++GRD+I
Sbjct: 22 IRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDII 81
Query: 224 GIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIR 283
G+A TGSGKTL ++LP+ C+ K P + P LI+ P+REL +Q + +
Sbjct: 82 GLAETGSGKTLAYSLPL---CMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEMLD 138
Query: 284 HLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLC 343
++ G+P GGV VS +++G ++VATPGRL+D+ + + L+ YL
Sbjct: 139 VIRCPGNP------VCGGVPVSTQTIALREGADVVVATPGRLLDLCKRGALCLDKITYLV 192
Query: 344 MDEADRMIDMGFEEDVRTIFSYFAGQ---RQTLLFSATMPKKIQNFARSALVRPVTVNVG 400
MDEADRM+ MG EE +R I G RQTLL+SAT+P+ ++ ARSA++ P+T+ VG
Sbjct: 193 MDEADRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAVLNPITIQVG 252
Query: 401 RAGAASLTVRQDLEPAQPEARTVQLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVE 459
G + +V+Q++ + +LL L+ TP PP ++F Q+VD V E L +
Sbjct: 253 PGGLIAPSVQQNVVFLYHYQKPQKLLETLRTTPYPPVIVFTSSIQNVDYVTELLKQEQFH 312
Query: 460 AVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVH 519
A +H K Q+ R + V+AFR G+ D+LVATDVAS+GLDF + HVINYD+P+ IE Y+H
Sbjct: 313 ASGLHSEKPQDYRFKLVKAFRDGKVDILVATDVASRGLDFPEVTHVINYDLPDTIECYIH 372
Query: 520 R 520
R
Sbjct: 373 R 373
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 273 bits (669), Expect = 1e-71
Identities = 154/396 (38%), Positives = 219/396 (55%), Gaps = 13/396 (3%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPI 240
I F +K I + Q+PTPIQ +PA+L RD++ A TGSGKT F +PI
Sbjct: 183 IENFDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPI 242
Query: 241 IMFCLEQEVKMP-FIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAI 299
I + Q++ + + P LI+ P+RELA IQ K + + +RSC+
Sbjct: 243 INHLVCQDLNQQRYSKTAYPKCLILAPTRELA------IQILSESQKFSLNTPLRSCVVY 296
Query: 300 GGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDV 359
GG + VQ G H++VATPGRL+D ++K + L C+Y+ +DEADRM+DMGFE +
Sbjct: 297 GGADTHSQIREVQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQI 356
Query: 360 RTIFSYF---AG-QRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEP 415
R I +G RQTL+FSAT PK+IQ A L + + VGR G+ S +++Q++
Sbjct: 357 RKIIEESNMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTVGRVGSTSDSIKQEIIY 416
Query: 416 AQPEARTVQLLHCLQKTPPPTLI--FAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERS 473
+ L + T P TLI F E K+ D++ +LL KG +IHG + Q ER
Sbjct: 417 MTDVEKLNYLKNIFNTTAPNTLILIFVETKKGADSLARFLLSKGYPVSSIHGDRSQVERE 476
Query: 474 RAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXX 533
A+ FR G+ +LVAT VA++GLD N++HVINYD+P DIE YVHRI
Sbjct: 477 AALSMFRNGQCPILVATAVAARGLDIPNVKHVINYDLPSDIEEYVHRIGRTGRLGNHGRA 536
Query: 534 XXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGE 569
++++ DLV LL+EA Q VP +L + E
Sbjct: 537 TSFYVDKNNNIAIDLVDLLKEANQIVPQWLSALADE 572
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 272 bits (668), Expect = 1e-71
Identities = 163/436 (37%), Positives = 233/436 (53%), Gaps = 17/436 (3%)
Query: 137 IQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRG 196
I YE K + I + E R +L I V G D P++TF+ F I+
Sbjct: 183 IDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSA 242
Query: 197 LEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRN 256
++ + +KPT IQ Q +P VL+GRD+IGIA TGSGKT F LP+I+ ++Q R+
Sbjct: 243 IKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQ---RD 299
Query: 257 EGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVH 316
EGP G+I P+RELA Q F+ K + + +R GG++ E + ++ G
Sbjct: 300 EGPIGVICAPTRELAHQI------FLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCE 353
Query: 317 IMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFS 376
I+VATPGRL+DML K + + YL +DEADRM D+GFE VR+I RQTLLFS
Sbjct: 354 IVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFS 413
Query: 377 ATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTP--- 433
ATMP K++ AR L P+ V VG G A+ + Q + +A + L L+K P
Sbjct: 414 ATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWL--LEKLPGMI 471
Query: 434 --PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATD 491
L+FA +K VD + L L + A+HG KDQ R ++ F+ G VL+ATD
Sbjct: 472 DEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATD 531
Query: 492 VASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXP-DHSVLRDLVH 550
VA++GLD +++ V+NYD+ +D++ +VHRI + +LV+
Sbjct: 532 VAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVN 591
Query: 551 LLREAGQRVPGFLLDM 566
L AGQ VP L D+
Sbjct: 592 SLVAAGQNVPPELTDL 607
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 272 bits (666), Expect = 2e-71
Identities = 153/428 (35%), Positives = 231/428 (53%), Gaps = 14/428 (3%)
Query: 144 KTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQ 203
K ++P I L ET + KL I ++G + P P F+ P IL +G
Sbjct: 84 KDFYKPSEFISNLSETDVKGYLAKLEITLKGRNIPRPSMEFEQGGLPDYILEEANKQGFS 143
Query: 204 KPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLI 263
KPT IQ QGMP L+GRDM+GIA TGSGKTL + P ++ Q+ R +GP L+
Sbjct: 144 KPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALVHITHQD---QLRRGDGPIALV 200
Query: 264 ICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPG 323
+ P+RELA+Q + F + + + C+ GG + +++G I++ATPG
Sbjct: 201 LAPTRELAQQIQQVATDFGQRINANNT-----CV-FGGAPKGPQIRDLERGAEIVIATPG 254
Query: 324 RLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKI 383
RL+D L++ + L C YL +DEADRM+DMGFE +R I RQ L++SAT PK++
Sbjct: 255 RLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQVLMWSATWPKEV 314
Query: 384 QNFARSALVRPVTVNVGRAG-AASLTVRQDLEPAQPEARTVQLLHCL----QKTPPPTLI 438
+N A L + +N+G +A+ + Q ++ + + +L+ L + T+I
Sbjct: 315 RNLAEEFLNDYIQINIGSLNLSANHNILQIVDVCEDYEKDQKLMKLLTEISAENETKTII 374
Query: 439 FAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLD 498
F E K+ VD + + G AV+IHG K Q+ER + AFR G + +LVATDVA++GLD
Sbjct: 375 FVETKRRVDDITRNINRNGWRAVSIHGDKSQQERDYVLNAFRNGRQGILVATDVAARGLD 434
Query: 499 FANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQR 558
+++ VINYD P + E+YVHRI + + DL+++LREA Q
Sbjct: 435 VEDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTNSNANKAGDLINVLREANQV 494
Query: 559 VPGFLLDM 566
+ L +M
Sbjct: 495 INPKLAEM 502
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 270 bits (663), Expect = 6e-71
Identities = 148/408 (36%), Positives = 223/408 (54%), Gaps = 13/408 (3%)
Query: 167 KLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIA 226
++++ V G++PP + +F+ + ++ + KPTPIQ +P +LNGRD++ A
Sbjct: 159 EIQVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACA 218
Query: 227 FTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLK 286
TGSGKT F LP+I L++E + +R PY +I+ P+RELA Q HD + F K
Sbjct: 219 QTGSGKTAAFMLPMIHHLLDKEDSLE-LRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTK 277
Query: 287 LTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDE 346
L + C++ GG AV +++++ G H++VATPGRL+D +D+ V ++ +DE
Sbjct: 278 L------KVCVSYGGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDE 331
Query: 347 ADRMIDMGFEEDVRTIFSYFA----GQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRA 402
ADRM+DMGF + + + QRQTL+FSAT P +IQ A L + V VG
Sbjct: 332 ADRMLDMGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLHNYICVFVGIV 391
Query: 403 GAASLTVRQDLEPAQPEARTVQLLHCLQK-TPPPTLIFAERKQDVDAVHEYLLLKGVEAV 461
G A V Q + + + +L L P TL+F E K++ D + +
Sbjct: 392 GGACADVEQTIHLVEKFKKRKKLEEILNGGNPKGTLVFVETKRNADYLASLMSETQFPTT 451
Query: 462 AIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+IHG + Q ER A+ F+ G DVL+AT VA++GLD N+ HV+NYD+P+ I++YVHRI
Sbjct: 452 SIHGDRLQREREMALYDFKSGRMDVLIATSVAARGLDIKNVNHVVNYDLPKSIDDYVHRI 511
Query: 522 XXXXXXXXXXXXXXXXX-XPDHSVLRDLVHLLREAGQRVPGFLLDMLG 568
D ++ DLV +L +AGQ VP FL D G
Sbjct: 512 GRTGRVGNKGRATSFYDPEADRAMASDLVKILTQAGQSVPDFLKDAGG 559
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 270 bits (662), Expect = 7e-71
Identities = 152/410 (37%), Positives = 226/410 (55%), Gaps = 14/410 (3%)
Query: 162 EMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRD 221
E R K ++ + G + P P+ TF FP+ ++ ++A+G PT IQ QG P L+GRD
Sbjct: 114 EAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRD 173
Query: 222 MIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHF 281
++GIA TGSGKTL + LP I+ Q + P +GP L++ P+RELA Q + ++ F
Sbjct: 174 VVGIAETGSGKTLTYCLPSIVHINAQPLLAP---GDGPIVLVLAPTRELAVQIQEEMKKF 230
Query: 282 IRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRY 341
R S IR+ GGV + + +GV + +ATPGRL+DML+ L Y
Sbjct: 231 GR------SSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTY 284
Query: 342 LCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGR 401
L +DEADRM+DMGFE +R I RQTL++SAT PK+++ A L + VN+G
Sbjct: 285 LVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRALASDFLQDFIQVNIGS 344
Query: 402 AG-AASLTVRQDLEPA-QPEARTVQLLHC---LQKTPPPTLIFAERKQDVDAVHEYLLLK 456
AA+ + Q +E + E R + H ++ LIF K+ D + +L
Sbjct: 345 MELAANHRITQIVEVVTEMEKRDRMIKHMEKVMENKENKILIFVGTKRVADEITRFLRQD 404
Query: 457 GVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIEN 516
G A++IHG K Q ER ++ F+ G+ ++VATDVAS+G+D NI HV+NYD P + E+
Sbjct: 405 GWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSED 464
Query: 517 YVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
Y+HRI + RDLV++L+EA Q++ L++M
Sbjct: 465 YIHRIGRTGRAGAMGTAITLFTTDNQKQARDLVNVLQEAKQQIDPRLVEM 514
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 269 bits (660), Expect = 1e-70
Identities = 172/494 (34%), Positives = 256/494 (51%), Gaps = 21/494 (4%)
Query: 137 IQYEEPIKTSWRPPRCILELPETRHEMIRNKL-RILVEGDDPPPPIRTFQHMKFPKGILR 195
I YE K + PP I ++ E IR ++ I V G D P P+ + H P L
Sbjct: 430 IDYEPFNKAFYHPPAEIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCGLPASCLD 489
Query: 196 GLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIR 255
++ G PTPIQ Q MPA+++GRD+IG+A TGSGKT+ F LP+ +Q P
Sbjct: 490 VIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEP--- 546
Query: 256 NEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGV 315
+EGP G+I+ P+RELA Q + ++ FI+ L L R+ GG +SE + ++K
Sbjct: 547 SEGPVGIIMTPTRELAVQIYREMRPFIKALGL------RAACVYGGAPISEQIAEMKKTA 600
Query: 316 HIMVATPGRLMDMLDKKMVRL-NVCR--YLCMDEADRMIDMGFEEDVRTIFSYFAGQRQT 372
I+VATPGRL+D+L R+ N+ R YL +DEADRM DMGFE V I + RQT
Sbjct: 601 DIVVATPGRLIDLLTANSGRVTNLYRVTYLVLDEADRMFDMGFEPQVMKILNNIRPDRQT 660
Query: 373 LLFSATMPKKIQNFARSALV-RPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCL-- 429
+LFSAT PK++++ AR L +P+ + VG + + Q +E + + +LL L
Sbjct: 661 VLFSATFPKQMESLARKVLKNKPLEITVGGRSVVAAEIEQIVEVRSEDTKFHRLLEILGE 720
Query: 430 ---QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDV 486
++ TLIF +R++ D + + L+ KG +++HGGKDQ +R + F+ G +
Sbjct: 721 LYNREKDARTLIFVDRQEAADDLLKDLIRKGYVTMSLHGGKDQVDRDETISDFKAGNVPI 780
Query: 487 LVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLR 546
+ AT VA++GLD ++ VINYD+P +E+YVHR R
Sbjct: 781 VTATSVAARGLDVKQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQDRYAR 840
Query: 547 DLVHLLREAGQRVPGFLLDMLGEPDVPAPAGQGCSYCAGLGHRITECPKL--EAVQNKQA 604
D++ L+ + VP L M AG+ + +G G + + +L E Q
Sbjct: 841 DIIAALKASAAHVPPELEAMAASFKEKLAAGKAKAAGSGFGGKGLDRFELDREKTLKAQK 900
Query: 605 SNIGRRDYLANTAA 618
S G D A AA
Sbjct: 901 SAYGEADDDAKAAA 914
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 269 bits (659), Expect = 2e-70
Identities = 150/452 (33%), Positives = 236/452 (52%), Gaps = 15/452 (3%)
Query: 144 KTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQ 203
K ++P +L E I ++GD P P F+ FP ++ + +G
Sbjct: 119 KNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFA 178
Query: 204 KPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLI 263
KPT IQ QG P ++GRD++G+A TGSGKTL + LP ++ + + ++ R +GP L+
Sbjct: 179 KPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVH-INNQPRLE--RGDGPIALV 235
Query: 264 ICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPG 323
+ P+RELA+Q + F + +R+ GG + +++GV I++ATPG
Sbjct: 236 LAPTRELAQQIQQVAIEF------GSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPG 289
Query: 324 RLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKI 383
RL+D L++ L C YL +DEADRM+DMGFE +R I RQ L++SAT PK++
Sbjct: 290 RLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEV 349
Query: 384 QNFARSALVRPVTVNVGRAG-AASLTVRQDLEPAQPEARTVQLLHCLQ----KTPPPTLI 438
+ A L + VN+G +A+ + Q ++ + ++L+ L + T+I
Sbjct: 350 RQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTII 409
Query: 439 FAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLD 498
F E K+ VD + + +G A AIHG K Q+ER + +FR G +LVATDVA++GLD
Sbjct: 410 FVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLD 469
Query: 499 FANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQR 558
+++ VINYD P + E+YVHRI + + DL+ +LREA Q
Sbjct: 470 VDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQT 529
Query: 559 VPGFLLDM-LGEPDVPAPAGQGCSYCAGLGHR 589
+ L++M + G G Y G G++
Sbjct: 530 INPKLMNMAMNGGYNKRGGGMGGGYRGGNGYQ 561
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 268 bits (658), Expect = 2e-70
Identities = 148/396 (37%), Positives = 231/396 (58%), Gaps = 21/396 (5%)
Query: 137 IQYEEPIKTSWRPPRCILELPETRHEMIRNKLR-ILVEGDDPPPPIRTFQHMKFPKGILR 195
I YE K + PP +LE+ E E++R ++ I + G D P P+R + P+G L
Sbjct: 357 IDYEPFRKAFYVPPVEVLEMDEEEAELVRLEMDGIKIRGQDAPKPVRNWGAFGLPQGCLD 416
Query: 196 GLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIR 255
++ +G + PT IQ Q +PA+++GRD+IGIA TGSGKT+ F LP++ +Q P
Sbjct: 417 VIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQR---PVSG 473
Query: 256 NEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGV 315
+EGP +++ P+RELA Q + Q F++ L IR+ +GG ++SE + ++KG
Sbjct: 474 SEGPIAVVMSPTRELASQIYKECQPFLKVLN------IRASCCVGGSSISEDIAAMKKGA 527
Query: 316 HIMVATPGRLMDMLDKKMVRL-NVCR--YLCMDEADRMIDMGFEEDVRTIFSYFAGQRQT 372
+++ TPGR++D+L R+ NV R Y+ MDEADRM DMGFE V I + Q
Sbjct: 528 EVVICTPGRMIDLLTANNGRVTNVRRTTYIVMDEADRMFDMGFEPQVMKIINNVRPSAQK 587
Query: 373 LLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKT 432
+LFSAT PK +++ AR LV+P+ + VG + + Q +E + + +LL L +
Sbjct: 588 VLFSATFPKTMESLARRILVKPLEITVGGRSVVAPEIDQRVEVRDGDTKFTRLLEILGEM 647
Query: 433 PPP--------TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEK 484
TLIF +R++ D + LL +G ++HGGK+Q +R A++ F+ G+
Sbjct: 648 GEEHKDEDDFRTLIFVDRQESADDLFRELLQRGYVCASLHGGKEQVDRDEAIKNFKNGDV 707
Query: 485 DVLVATDVASKGLDFANIQHVINYDMPEDIENYVHR 520
++VAT VA++GLD ++ VINYD P +E+YVHR
Sbjct: 708 PIIVATSVAARGLDVKELKLVINYDAPNHMEDYVHR 743
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 267 bits (655), Expect = 5e-70
Identities = 154/431 (35%), Positives = 240/431 (55%), Gaps = 19/431 (4%)
Query: 137 IQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRG 196
I+YE K ++ I +L E + E IR + I V G PP PI +F H+ F + ++R
Sbjct: 17 IKYEAFTKNFYQEHPDITKLTEQQVEKIRKEFEIKVSGVRPPKPIVSFGHLGFDEELMRQ 76
Query: 197 LEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRN 256
+ G +KPT IQ Q +P L+GRD++G+A TGSGKT+ + P+++ L+Q +N
Sbjct: 77 ITKLGFEKPTQIQCQALPCGLSGRDIVGVAKTGSGKTVSYLWPLLIHILDQR---ELEKN 133
Query: 257 EGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVH 316
EGP GLI+ P+REL +Q + + + + ++ +GG E ++++ GV
Sbjct: 134 EGPIGLILAPTRELCQQVYTESKRYAKIYNISVGA------LLGGENKHEQWKMLKAGVE 187
Query: 317 IMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFS 376
I++ATPGRLM+M+ KK L C Y+ +DEAD+M MGFE+ +R+I RQTLLF+
Sbjct: 188 ILIATPGRLMEMIQKKATNLRRCTYVVIDEADKMFSMGFEKQIRSIMQQIRPDRQTLLFT 247
Query: 377 ATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQD---LEPAQPEARTV--QLLHCLQK 431
AT+ KKIQN L PVT+ +G A+ +RQ+ + + + + + L CLQK
Sbjct: 248 ATLKKKIQNLVMDVLRNPVTIKIGGENQANEDIRQEPIIFKDSNFKDQWILNNLNLCLQK 307
Query: 432 TPPPTLIFAERKQDVDAVHEYLLLK-GVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVAT 490
LIF + + + E + + +EA+ +HG K Q ER+ + F + K++L+AT
Sbjct: 308 --GKVLIFVNHITNCNKLSELIKQRLYLEALVLHGDKIQSERTDIINKF-KAAKNLLIAT 364
Query: 491 DVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHS-VLRDLV 549
DVAS+GLD I+ VINYD+P+D + Y+HRI S D++
Sbjct: 365 DVASRGLDIPEIKTVINYDLPQDTDTYIHRIGRTGRAGATDGTAYSLILMSESKFASDML 424
Query: 550 HLLREAGQRVP 560
++ +GQ VP
Sbjct: 425 KVMEISGQPVP 435
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 266 bits (653), Expect = 9e-70
Identities = 148/408 (36%), Positives = 230/408 (56%), Gaps = 20/408 (4%)
Query: 170 ILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTG 229
I GD+ PPP+ TF + + + ++ KPTP+Q +P + GRD++ A TG
Sbjct: 134 IETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTG 193
Query: 230 SGKTLVFTLPIIMFCL-EQEVKMPF-IRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKL 287
SGKT F PII + +Q ++ P +R P +I+ P+RELA Q HD + F
Sbjct: 194 SGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQ--- 250
Query: 288 TGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEA 347
TG ++ +A GG V++ + +++GV I+VATPGRL D+L++ V L + R+L +DEA
Sbjct: 251 TG---VKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEA 307
Query: 348 DRMIDMGFEEDVRTIFSYF----AGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG 403
DRM+DMGFE +R I G RQT+LFSAT P++IQ A L + + VGR G
Sbjct: 308 DRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVG 367
Query: 404 AASLTVRQDLE---PAQPEARTVQLLHCLQKTPPP-----TLIFAERKQDVDAVHEYLLL 455
+++ + Q +E + + + LLH ++ TL+F E K+ D++ +L +
Sbjct: 368 SSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCI 427
Query: 456 KGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIE 515
G A IHG + Q+ER A+ +F+ G +LVATDVA++GLD ++ HV+N+D+P DI+
Sbjct: 428 NGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDID 487
Query: 516 NYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFL 563
+YVHRI + ++ + L L++EA Q VP +L
Sbjct: 488 DYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWL 535
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 266 bits (651), Expect = 2e-69
Identities = 157/436 (36%), Positives = 237/436 (54%), Gaps = 19/436 (4%)
Query: 141 EPI-KTSWRPPRCILELPETRHEMIRNKLR-ILVEGDDPPPPIRTFQHMKFPKGILRGLE 198
EPI K W P + L E +R +L I V G D P P++ + + L ++
Sbjct: 554 EPIRKNFWHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVD 613
Query: 199 AKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEG 258
G +KPTPIQ+Q +PA+++GRD+IG+A TGSGKT+ F LP+ +Q P +G
Sbjct: 614 NLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQP---PLKDTDG 670
Query: 259 PYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIM 318
P GLI+ P+RELA Q H + F LK+ G +R+ A GG + E + +++G I+
Sbjct: 671 PIGLIMTPTRELAVQIHKDCKPF---LKMMG---LRAVCAYGGAPIREQIAELKRGAEII 724
Query: 319 VATPGRLMDMLDKKMVRL-NVCR--YLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLF 375
V TPGR++D+L R+ N+ R Y+ +DEADRM DMGFE V IF+ RQT+LF
Sbjct: 725 VCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILF 784
Query: 376 SATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCL-----Q 430
SATMP+ I + + L P+ V VG + + Q +E ++ ++L L +
Sbjct: 785 SATMPRIIDSLTKKVLKNPIEVTVGGRSVVAKEIEQIVEVRDEPSKFHRVLELLGELYDR 844
Query: 431 KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVAT 490
TLIF ER++ D + + L++KG ++IHGGKDQ +R + F++G +L+AT
Sbjct: 845 DEDARTLIFVERQEKADDLLKELMMKGYPCMSIHGGKDQIDRDSTISDFKKGVVPILIAT 904
Query: 491 DVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVH 550
VA++GLD ++ VINYD P +E+YVHR + +
Sbjct: 905 SVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQENCAPGIAK 964
Query: 551 LLREAGQRVPGFLLDM 566
L ++GQ +P L +M
Sbjct: 965 ALEQSGQPIPDRLNEM 980
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 264 bits (648), Expect = 4e-69
Identities = 156/408 (38%), Positives = 222/408 (54%), Gaps = 16/408 (3%)
Query: 164 IRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMI 223
+R+KL + V G PP P +F H F + ++ + +PTPIQ QG+P L+GRDMI
Sbjct: 235 LRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMI 294
Query: 224 GIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIR 283
GIA TGSGKT F P+++ ++Q+ P +GP +I+CP+REL +Q H + F +
Sbjct: 295 GIAKTGSGKTAAFIWPMLIHIMDQKELEP---GDGPIAVIVCPTRELCQQIHAECKRFGK 351
Query: 284 HLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLC 343
L RS GG ++ E + +Q+G I+V TPGRL+D + KK L YL
Sbjct: 352 AYNL------RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLV 405
Query: 344 MDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG 403
DEADRM DMGFE VR+I S+ RQTLLFSAT KKI+ AR L+ P+ V G G
Sbjct: 406 FDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG 465
Query: 404 AASLTVRQDLE-----PAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGV 458
A+ V Q +E P++ T +L+ + L+F +K + + + L +G
Sbjct: 466 EANEDVTQIVEILHSGPSKWNWLTRRLVEF--TSSGSVLLFVTKKANAEELANNLKQEGH 523
Query: 459 EAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYV 518
+HG DQ ER++ + F++ + VLVATDVA++GLD +I+ VINYD+ DI+ +
Sbjct: 524 NLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHT 583
Query: 519 HRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
HRI D + DLV L A Q V LLD+
Sbjct: 584 HRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDL 631
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 263 bits (644), Expect = 1e-68
Identities = 154/416 (37%), Positives = 225/416 (54%), Gaps = 26/416 (6%)
Query: 174 GDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKT 233
G P I +F +K + I ++ KPTP+Q +P +L+GRD++ A TGSGKT
Sbjct: 259 GQQVPEHITSFDDIKLTEIIRTNIKMARYDKPTPVQKYAIPIILSGRDLMSCAQTGSGKT 318
Query: 234 LVFTLPIIMFCLEQEVKM------PFIRNEG-PYGLIICPSRELAKQTHDIIQHFIRHLK 286
F +PI+ LEQ M P+ R + P GL++ P+RELA Q ++ + F +
Sbjct: 319 AAFLVPILNRMLEQGASMNPASNRPYQRRKQYPLGLVLAPTRELATQIYEEAKKFSYRSR 378
Query: 287 LTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDE 346
+ R + GG SE M + +G H++VATPGRL D++++ + L R+L +DE
Sbjct: 379 M------RPAVLYGGNNTSEQMRELDRGCHLIVATPGRLDDIINRGKIGLENLRFLVLDE 432
Query: 347 ADRMIDMGFEEDVRTIFSYF----AGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRA 402
ADRM+DMGFE +R I GQRQTL+FSAT PK IQ A L + + VGR
Sbjct: 433 ADRMLDMGFEPQIRHIIENRDMPPTGQRQTLMFSATFPKNIQELASDFLSNYIFLAVGRV 492
Query: 403 GAASLTVRQDL---EPAQPEARTVQLLHCLQKTPPP------TLIFAERKQDVDAVHEYL 453
G+ S + Q + + + + LL L++ P TLIF E K+ DA+ E+L
Sbjct: 493 GSTSENITQTILWVNENEKRSYLLDLLSRLREGSPDYSPDSLTLIFVETKKGADALEEFL 552
Query: 454 LLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPED 513
+IHG + Q ER A++ FR G+ +LVAT VA++GLD +++HVINYD+P D
Sbjct: 553 YQNKHPVTSIHGDRSQREREDALKCFRSGDCPILVATAVAARGLDIPHVKHVINYDLPSD 612
Query: 514 IENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGE 569
+E YVHRI + +++ DLV LL E Q +P FL +M +
Sbjct: 613 VEEYVHRIGRTGRMGNLGIATSFFNEKNRNIVSDLVELLIETNQELPSFLEEMAND 668
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 262 bits (642), Expect = 2e-68
Identities = 159/439 (36%), Positives = 230/439 (52%), Gaps = 29/439 (6%)
Query: 174 GDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKT 233
G + PP I +F ++ + I + KPTP+Q +P ++NGRD++ A TGSGKT
Sbjct: 287 GQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKT 346
Query: 234 LVFTLPIIMFCLE-------QEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLK 286
F +PI+ E Q + R + P GL++ P+RELA Q + + F +
Sbjct: 347 AAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSR 406
Query: 287 LTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDE 346
+ R + GG SE M + +G H++VATPGRL DM+ + V L R+L +DE
Sbjct: 407 M------RPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDE 460
Query: 347 ADRMIDMGFEEDVRTIFSYF----AGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRA 402
ADRM+DMGFE +R I GQRQTL+FSAT PK+IQ A L + + VGR
Sbjct: 461 ADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRV 520
Query: 403 GAASLTVRQD-LEPAQPEART--VQLLHCLQKTPPPT-----LIFAERKQDVDAVHEYLL 454
G+ S + Q L +P+ R+ + LL ++ P T LIF E K+ D++ E+L
Sbjct: 521 GSTSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLY 580
Query: 455 LKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDI 514
+IHG + Q+ER A+ FR G+ +LVAT VA++GLD +++HVIN+D+P D+
Sbjct: 581 QCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPSDV 640
Query: 515 ENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGEPD--- 571
E YVHRI + ++ DL+ LL E Q +P F+ DM +
Sbjct: 641 EEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDLLELLIETKQEIPSFMEDMSSDRGHGG 700
Query: 572 -VPAPAGQGCSYCAGLGHR 589
A G G Y G G R
Sbjct: 701 AKRAGRGGGGRYGGGFGSR 719
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 262 bits (641), Expect = 3e-68
Identities = 156/431 (36%), Positives = 220/431 (51%), Gaps = 32/431 (7%)
Query: 155 ELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMP 214
E+ E + R I ++G PPPIRT+ P +L ++ G KPTPIQ+Q +P
Sbjct: 312 EMTERDWRIFREDFEIYIKGGRVPPPIRTWAESPLPWELLEAIKKAGYIKPTPIQMQAIP 371
Query: 215 AVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQT 274
L RD+IGIA TGSGKT F LP++ + + +GPY LI+ PSRELA Q
Sbjct: 372 IALEMRDLIGIAVTGSGKTAAFVLPMLTYVKKLPPLDDETSLDGPYALILAPSRELALQI 431
Query: 275 HDIIQHFIRHLKLTGSPEIRSCLAIGG-VAVSECMEVVQKGVHIMVATPGRLMDMLDKKM 333
+D +K + RS +GG A S+ E ++KG I++ TPGR+ D LD+
Sbjct: 432 YD------ETVKFSAFCSCRSVAVVGGRNAESQAFE-LRKGCEIIIGTPGRVKDCLDRAY 484
Query: 334 VRLNVCRYLCMDEADRMIDMGFEEDVRTI---------------------FSYFAGQRQ- 371
L+ C Y+ +DEADRMIDMGFE+ ++ I S AG R+
Sbjct: 485 TVLSQCNYVILDEADRMIDMGFEDVLKYILDCIPSTNLKDRDESSALEQELSTKAGHRRY 544
Query: 372 --TLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCL 429
T +FSATMP ++ + L P +++G G ++ Q L+ Q +T L L
Sbjct: 545 RITHMFSATMPPAVEKLTKRYLRAPAFISIGDVGGGKTSITQQLDFVQESKKTRHLEETL 604
Query: 430 QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVA 489
+ PP +IF K++ D + +++ G AV++HGGK QE R A+ F+ G D+LVA
Sbjct: 605 ETLEPPIIIFVNLKKNTDVITKHITKIGYRAVSLHGGKTQESREDALNKFKSGAYDILVA 664
Query: 490 TDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLV 549
TDV +GLD I+ VINYDMP+DI+ Y HRI D + DL
Sbjct: 665 TDVVGRGLDVEGIKVVINYDMPKDIQTYTHRIGRTGRAGLKGLSISFVTDADVDLFYDLK 724
Query: 550 HLLREAGQRVP 560
LL VP
Sbjct: 725 QLLISTDNIVP 735
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 262 bits (641), Expect = 3e-68
Identities = 148/414 (35%), Positives = 221/414 (53%), Gaps = 7/414 (1%)
Query: 155 ELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMP 214
++ E ++ R I V G D P PIR ++ + + G +KPTPIQ+Q +P
Sbjct: 115 DMTERDWKIFREDYSINVRGKDVPNPIRNWKDCHVLEIQTELIRNIGYEKPTPIQMQCIP 174
Query: 215 AVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQT 274
L RDMIGIA TGSGKT+ F +P+I + + + EGPYGLI+ P+RELA Q
Sbjct: 175 IGLKLRDMIGIAETGSGKTIAFLIPLISYVGNKPILDYKTSQEGPYGLILAPARELALQI 234
Query: 275 HDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMV 334
D Q + K IR+ +GG + + ++KGV I++ATPGR+ D L+K +
Sbjct: 235 EDEAQKLLN--KTHELKRIRTLSIVGGRNIDQQAFSLRKGVEIIIATPGRMQDCLEKTLT 292
Query: 335 RLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAG--QRQTLLFSATMPKKIQNFARSALV 392
L C Y+ +DEADRMID+GF++ + I QR T +FSATM K+++N A+ L
Sbjct: 293 VLVQCSYVILDEADRMIDLGFQDSLNFILDQIPPEIQRTTHMFSATMQKELENIAKRYLN 352
Query: 393 RPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTP---PPTLIFAERKQDVDAV 449
P+ V +G GA +++Q L + L++ L PP ++F +K+ VD V
Sbjct: 353 SPINVTIGDIGAGKKSIQQILNFISENKKKSTLINTLNNKELAVPPIIVFLNQKKMVDIV 412
Query: 450 HEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYD 509
++ G +A ++HGGK QE R ++ F+ G D+LV+TDVA +G+D NI VINYD
Sbjct: 413 CREIVSHGFKATSLHGGKMQEVRENSLNLFKSGVFDILVSTDVAGRGIDINNINLVINYD 472
Query: 510 MPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFL 563
P+ I+ Y HRI D + +L +L + +P L
Sbjct: 473 FPKSIDTYTHRIGRTGRAGKNGIAISFITPEDSGLFPELKKILLTSNNPIPNEL 526
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 261 bits (640), Expect = 3e-68
Identities = 145/412 (35%), Positives = 229/412 (55%), Gaps = 22/412 (5%)
Query: 174 GDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKT 233
G++ PP I +F ++ + I+ +E +PTP+Q +P + RD++ A TGSGKT
Sbjct: 172 GNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKT 231
Query: 234 LVFTLPII--MFCLEQEVKMPFIRNEGPYG--------LIICPSRELAKQTHDIIQHFIR 283
F LPI+ ++ + ++ G YG L++ P+RELA Q ++ +
Sbjct: 232 AAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR---- 287
Query: 284 HLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLC 343
K + +R C+ GG + + + +++G H++VATPGRL+DM+++ + L+ C+YL
Sbjct: 288 --KFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 345
Query: 344 MDEADRMIDMGFEEDVRTIFSYFA----GQRQTLLFSATMPKKIQNFARSALVRPVTVNV 399
+DEADRM+DMGFE +R I G R T++FSAT PK+IQ AR L + + V
Sbjct: 346 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 405
Query: 400 GRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPP--TLIFAERKQDVDAVHEYLLLKG 457
GR G+ S + Q + + + LL L T TL+F E K+ D++ ++L +G
Sbjct: 406 GRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEG 465
Query: 458 VEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENY 517
+IHG + Q +R A+ FR G+ +LVAT VA++GLD +N++HVIN+D+P DIE Y
Sbjct: 466 YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEY 525
Query: 518 VHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGE 569
VHRI + ++ +DL+ LL EA Q VP +L +M E
Sbjct: 526 VHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYE 577
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 261 bits (639), Expect = 4e-68
Identities = 158/485 (32%), Positives = 247/485 (50%), Gaps = 19/485 (3%)
Query: 113 EEEHILESVAQSKALMGVAELAKG-IQYEEPIKTSWRPPRCILELPETRHEMIRNKLR-I 170
EEE++L A+ V + I YE+ K + P + L + +R L I
Sbjct: 347 EEENLLALAAKRSKKKDVITVDHSKINYEDFKKDFYVEPEELKNLSPAEVDELRASLDGI 406
Query: 171 LVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGS 230
+ G D P P+ ++ + + + G +KPT IQ Q +PA+ +GRD+IG+A TGS
Sbjct: 407 KIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGS 466
Query: 231 GKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGS 290
GKT+ F LP+ +Q P EGP +I+ P+RELA Q + F++ L
Sbjct: 467 GKTIAFLLPMFRHIKDQR---PLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLN---- 519
Query: 291 PEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDK---KMVRLNVCRYLCMDEA 347
IR+C A GG + + + +++G I+V TPGR++D+L ++ L+ C YL +DEA
Sbjct: 520 --IRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEA 577
Query: 348 DRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASL 407
DRM D+GFE V I + RQT+LFSAT P+ ++ AR L +PV + VG +
Sbjct: 578 DRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVAS 637
Query: 408 TVRQDLEPAQPEARTVQLLHCL-----QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVA 462
V Q +E E++ +LL L + TL+F +R++ DA+ L+ +G + +
Sbjct: 638 EVEQIVEVRPEESKFSRLLELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNS 697
Query: 463 IHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIX 522
IHGGKDQ +R + ++ G DVL+AT V ++GLD ++Q V+NYD P +E+YVHR+
Sbjct: 698 IHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVG 757
Query: 523 XXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGEPDVPAPAGQGCSY 582
D+ L+ + Q VP L + + AG+ +
Sbjct: 758 RTGRAGHTGVAVTFITPEQEKYAVDIAKALKMSKQPVPKELQTLASQFLEKVKAGKEKAA 817
Query: 583 CAGLG 587
G G
Sbjct: 818 GGGFG 822
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 259 bits (635), Expect = 1e-67
Identities = 156/432 (36%), Positives = 230/432 (53%), Gaps = 15/432 (3%)
Query: 140 EEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEA 199
E + S+RP + E R I +G D P P TF+ + FP I
Sbjct: 46 ESVTRLSYRP-KVDFRRSEREISEWRKTKEITTKGRDVPDPALTFEEVGFPAEIADEWRY 104
Query: 200 KGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGP 259
PTPIQ QG P ++GRDM+GIA TGSGKTL + LP +M ++Q+ ++ R +GP
Sbjct: 105 AEFTTPTPIQSQGWPIAMSGRDMVGIAKTGSGKTLSYLLPALMH-IDQQSRLR--RGDGP 161
Query: 260 YGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMV 319
LI+ P+RELA+Q + F R +K+ + CL GG A + + ++ GV I++
Sbjct: 162 IALILAPTRELAQQIKQVTDDFGRAMKIKNT-----CL-FGGGAKRQQGDDLKYGVEIVI 215
Query: 320 ATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATM 379
ATPGRL+D L + L C YL +DEADRM+DMGFE +R I QTL++SAT
Sbjct: 216 ATPGRLIDFLSSEHTNLRRCSYLVLDEADRMLDMGFEPQIRAIIEQIRPDHQTLMWSATW 275
Query: 380 PKKIQNFARSALVRPVTVNVGRAG-AASLTVRQDLEPAQ---PEAR-TVQLLHCLQKTPP 434
P + + L + +NVG AA+ + Q ++ Q EA+ ++ L + +
Sbjct: 276 PDAVSRLVKDYLKDYIQINVGSLKLAANHNILQIIDVCQEHEKEAKLSILLREIMAEKEC 335
Query: 435 PTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVAS 494
T+IF E K+ VD + +L G A+ IHG K Q ER + +FR G+ +L+ATDVA+
Sbjct: 336 KTIIFIETKKRVDDITRKVLRDGWPAMCIHGDKSQREREYTLNSFRSGKNPILIATDVAA 395
Query: 495 KGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLRE 554
+GLD +++ VIN+D P E+Y+HRI + R+L+ +L+E
Sbjct: 396 RGLDVDDVKFVINFDYPTTSEDYIHRIGRTGRSNNTGTAYTFFTPDNAGRARELIDVLKE 455
Query: 555 AGQRVPGFLLDM 566
A Q + LLDM
Sbjct: 456 AKQVINPKLLDM 467
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 258 bits (633), Expect = 2e-67
Identities = 146/401 (36%), Positives = 214/401 (53%), Gaps = 12/401 (2%)
Query: 166 NKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGI 225
N + + V G D P PI+ F I+ + G + PTPIQ +P + +GRD++
Sbjct: 229 NNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMAC 288
Query: 226 AFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHL 285
A TGSGKT F LPI+ LE ++ R P +I+ P+RELA IQ F
Sbjct: 289 AQTGSGKTAAFLLPILSKLLEDPHELELGR---PQVVIVSPTRELA------IQIFNEAR 339
Query: 286 KLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMD 345
K ++ + GG + E + +G H+++ATPGRL+D +D+ + R++ +D
Sbjct: 340 KFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLD 399
Query: 346 EADRMIDMGFEEDVRTIFSYFA--GQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG 403
EADRM+DMGF ED+R I ++ + QTL+FSAT P++IQ A L V V +G G
Sbjct: 400 EADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVG 459
Query: 404 AASLTVRQDLEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAI 463
A V+Q + A+ +L+ L + T++F E K+ D + +L K +I
Sbjct: 460 GACSDVKQTIYEVNKYAKRSKLIEILSEQADGTIVFVETKRGADFLASFLSEKEFPTTSI 519
Query: 464 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXX 523
HG + Q +R +A+ F+ G VL+AT VAS+GLD NI+HVINYDMP I++YVHRI
Sbjct: 520 HGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIGR 579
Query: 524 XXXXXXXXXXXXXXX-XPDHSVLRDLVHLLREAGQRVPGFL 563
D ++ DLV +L +GQ VP FL
Sbjct: 580 TGRVGNNGRATSFFDPEKDRAIAADLVKILEGSGQTVPDFL 620
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 258 bits (632), Expect = 3e-67
Identities = 158/423 (37%), Positives = 222/423 (52%), Gaps = 17/423 (4%)
Query: 149 PPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPI 208
P + + E R++ I V GD+ P PI +F+ FP IL+ ++ G PTPI
Sbjct: 117 PAAAAIAADDPSTEAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPI 176
Query: 209 QVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSR 268
Q Q P L +D++ IA TGSGKTL + LP M +++ P GP L++ P+R
Sbjct: 177 QAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMH-IKRLQNNP---RSGPTVLVLAPTR 232
Query: 269 ELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDM 328
ELA Q I++ + K S I S GG + + +GV ++VATPGRL D+
Sbjct: 233 ELATQ---ILEEAV---KFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDI 286
Query: 329 LDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFAR 388
L+ + + L YL +DEADRM+DMGFE +R I +RQTL+++AT PK+++ A
Sbjct: 287 LEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAE 346
Query: 389 SALVRPVTVNVGRAG--AASLTVRQDLE---PAQPEARTVQLLHCLQKTPPPTLIFAERK 443
LV PV V +G A+ + Q++E P++ R Q+L Q + LIF K
Sbjct: 347 DLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRS-QDSGSKVLIFCTTK 405
Query: 444 QDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQ 503
+ D + L + A AIHG K Q ER + + FR G +LVATDVA++GLD +I+
Sbjct: 406 RMCDQLAR-TLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIR 464
Query: 504 HVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFL 563
VINYD P IE+YVHRI D DL+ +L A QRVP L
Sbjct: 465 VVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDL 524
Query: 564 LDM 566
DM
Sbjct: 525 ADM 527
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 258 bits (631), Expect = 4e-67
Identities = 151/402 (37%), Positives = 220/402 (54%), Gaps = 14/402 (3%)
Query: 170 ILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTG 229
I V G + + TF+ FP+ IL ++ + KPTPIQ G P VL G+D++GIA TG
Sbjct: 141 IQVNGCESIKALLTFEECNFPQSILDVIKEQNYIKPTPIQAIGWPIVLQGKDVVGIAETG 200
Query: 230 SGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTG 289
SGKT+ F +P I+ L+ + EGP LI+ P+REL Q D +K T
Sbjct: 201 SGKTISFLIPAIIHILDTPLAQ---YREGPRVLILAPTRELVCQIAD------EAIKFTK 251
Query: 290 SPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADR 349
I++ GGV S M+ Q G I VATPGRL+D + + + L+ C +L +DEADR
Sbjct: 252 GTAIKTVRCFGGVPQSSQMKDFQSGCDICVATPGRLIDFIKRGVTSLSRCTFLILDEADR 311
Query: 350 MIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGA-ASLT 408
M++MGFE V+ I RQT++++AT P+ IQ FA + P+ +N+G A+ +
Sbjct: 312 MLEMGFEVQVQDIIGQIRPDRQTVMWTATWPQAIQQFALGFMFHPLQINIGNPDLHANES 371
Query: 409 VRQDLEPAQPEARTVQLLHCLQK--TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGG 466
V+Q +E Q R ++ +++ + LIF + K+ D + L + +HG
Sbjct: 372 VKQIIEVCQERDRDSKMNEIVKRIGSEKKVLIFVKTKRSADNLCYKLRDQRYRVACMHGD 431
Query: 467 KDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI--XXX 524
K Q ER RA+ F+ G + L+ATDVAS+GLD NI+ VINY+MP DIENY+HRI
Sbjct: 432 KVQAERDRALSDFKSGAVNYLIATDVASRGLDIRNIEIVINYEMPSDIENYIHRIGRTGR 491
Query: 525 XXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
D + +DL+ +L+ A Q VP LL+M
Sbjct: 492 MGRSVEGEAISLFTYADARLAKDLISVLKGAHQEVPSELLNM 533
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 258 bits (631), Expect = 4e-67
Identities = 150/405 (37%), Positives = 212/405 (52%), Gaps = 18/405 (4%)
Query: 174 GDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKT 233
G D P PI F + ++ ++ KPTP+Q +P V GRD++ A TGSGKT
Sbjct: 146 GKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKT 205
Query: 234 LVFTLPIIMFCLEQ------EVKMPFIRNEG-PYGLIICPSRELAKQTHDIIQHFIRHLK 286
F P+ E F +G P L++ P+RELA Q F K
Sbjct: 206 GGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQI------FEEARK 259
Query: 287 LTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDE 346
T +R C+ GG + M V +G ++VATPGRL D+L++ V L +YL +DE
Sbjct: 260 FTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDE 319
Query: 347 ADRMIDMGFEEDVRTIFSYF----AGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRA 402
ADRM+DMGFE +R I RQTL+FSAT P IQ+ AR L + ++VGR
Sbjct: 320 ADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRV 379
Query: 403 GAASLTVRQDLEPAQPEARTVQLLHCLQKTPPP-TLIFAERKQDVDAVHEYLLLKGVEAV 461
G+ S + Q + + LL L TLIF E K+ D + ++L+++ +A
Sbjct: 380 GSTSENITQRILYVDDMDKKSALLDLLSAEHKGLTLIFVETKRMADQLTDFLIMQNFKAT 439
Query: 462 AIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
AIHG + Q ER RA+ AF+ D+LVAT VA++GLD N+ HVINYD+P DI++YVHRI
Sbjct: 440 AIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 499
Query: 522 XXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
+ ++++ L+ +L EA Q VP FL D+
Sbjct: 500 GRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEVPTFLSDL 544
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 257 bits (630), Expect = 6e-67
Identities = 150/425 (35%), Positives = 224/425 (52%), Gaps = 15/425 (3%)
Query: 141 EPIKTSW-RPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEA 199
EP K + P +LE T +K I + G + P PI F FP L +
Sbjct: 59 EPFKKDFFTPASSVLERSRTEVCQYLDKNEITMIGKNVPAPIMQFGESGFPSVFLDEMGR 118
Query: 200 KGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGP 259
+G Q+PT IQ G ++GRDM+GIA TGSGKTL + LP ++ Q +R +GP
Sbjct: 119 QGFQEPTSIQAVGWSIAMSGRDMVGIAKTGSGKTLAYILPALIHISNQP---RLLRGDGP 175
Query: 260 YGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMV 319
L++ P+RELA+Q + F R + + + +C+ GG + + +++GV I++
Sbjct: 176 IALVLAPTRELAQQIQQVCNDFGRRMSI-----MNTCI-FGGASKHPQADDLRRGVEIVI 229
Query: 320 ATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATM 379
ATPGRL+D L+ L YL +DEADRM+DMGFE +R I S RQ L++SAT
Sbjct: 230 ATPGRLIDFLESGTTNLRRTTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQVLMWSATW 289
Query: 380 PKKIQNFARSALVRPVTVNVGRAGAAS----LTVRQDLEPAQPEARTVQLLHCL-QKTPP 434
PK+I+ A L + +N+G A+ + + + E + E R +LL L Q+
Sbjct: 290 PKEIRKLAEEFLREYIQINIGSLNLAANENIMQIIECCEEYEKETRLFKLLTELSQQGDS 349
Query: 435 PTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVAS 494
++IF E K+ VD + + G IHG K Q++R + FRR +LVATDVAS
Sbjct: 350 KSIIFVETKRKVDQITNVIKRNGWRCDGIHGDKTQKDRDYVLNTFRRLRSGILVATDVAS 409
Query: 495 KGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLRE 554
+GLD ++++VIN+D P + E+Y+HRI + + DL+ +LRE
Sbjct: 410 RGLDVDDVKYVINFDFPNNTEDYIHRIGRTGRSTNKGTSYTFFTPANGAKAGDLIGVLRE 469
Query: 555 AGQRV 559
A Q V
Sbjct: 470 ANQFV 474
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 256 bits (627), Expect = 1e-66
Identities = 150/452 (33%), Positives = 231/452 (51%), Gaps = 30/452 (6%)
Query: 136 GIQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILR 195
G Q E T W + + + + + + I +G P PIRT+Q P+ IL
Sbjct: 368 GKQISELPDTHWSK-KPLKSMTKRDWHIFKEDFNISTKGGIAPNPIRTWQESNLPREILE 426
Query: 196 GLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIR 255
+ G +KP+PIQ+Q +P L GRD++GIA TGSGKT F +P++++ +Q
Sbjct: 427 AIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTE 486
Query: 256 NEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGV 315
+GPY L++ P+REL +Q ++F +H R +GG ++ + V KG
Sbjct: 487 ADGPYALVMAPTRELVQQIEKETRNFAQHF------GFRVVSLVGGQSIEDQAYQVSKGC 540
Query: 316 HIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF-----SYFAGQ- 369
I++ATPGRL D L+K+ + LN C Y+ +DEAD MID+GFE V ++ S+ +
Sbjct: 541 EIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADMMIDLGFEPQVTSVLDAMPSSFLKSED 600
Query: 370 ---------------RQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLE 414
R T+LFSATMP ++ ++ L RP T+ +G AG +RQ +
Sbjct: 601 DEMAEKQESDRSHIYRTTILFSATMPPLVEKLSKKYLRRPCTITIGEAGKVVDRIRQTVI 660
Query: 415 PAQPEARTVQLLHCLQK--TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEER 472
+ E + L L K PPP +IF +K+ D + L V +H G+ QE+R
Sbjct: 661 FVKSENDKKEHLTQLIKDGPPPPIIIFVNKKKHCDIIAPVLEECRVSYTILHSGRSQEQR 720
Query: 473 SRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXX 532
A+E F++ + +VL+AT VAS+G+ + HVIN+D+P++IE+Y HRI
Sbjct: 721 EAALEGFKKRKYEVLIATGVASRGIHVDGVTHVINFDIPKNIEDYTHRIGRTGRAGSAGL 780
Query: 533 XXXXXXXPDHSVLRDLVHLLREAGQRVPGFLL 564
D ++ DL +L VP LL
Sbjct: 781 ASSFITDKDVEIMYDLKQILTSTNNIVPIELL 812
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 256 bits (626), Expect = 2e-66
Identities = 143/402 (35%), Positives = 217/402 (53%), Gaps = 17/402 (4%)
Query: 165 RNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIG 224
R + I V G P PI+ F + P +++ + +G + PT IQ QG P ++G + +G
Sbjct: 265 REEQEITVRGQ-VPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVG 323
Query: 225 IAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRH 284
IA TGSGKTL + LP I+ Q+ P R +GP L++ P+RELA+Q + F
Sbjct: 324 IAKTGSGKTLGYILPAIVHINNQQ---PLQRGDGPIALVLAPTRELAQQIQQVATEF--- 377
Query: 285 LKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCM 344
S +R+ GG M +Q+G I++ATPGRL+D L L C YL +
Sbjct: 378 ---GSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVL 434
Query: 345 DEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG- 403
DEADRM+DMGFE +R I S RQTL++SAT PK+++ A L + +N+G
Sbjct: 435 DEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLEL 494
Query: 404 AASLTVRQDLEPAQPEARTVQL------LHCLQKTPPPTLIFAERKQDVDAVHEYLLLKG 457
+A+ +RQ ++ ++ +L ++ ++P +IF E K+ VD + ++ G
Sbjct: 495 SANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFG 554
Query: 458 VEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENY 517
V AIHG K Q ER + FR G+ ++LVATDVA++GLD I++VIN+D P++ E+Y
Sbjct: 555 VRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDY 614
Query: 518 VHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRV 559
+HRI + + LV +LREA Q +
Sbjct: 615 IHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEI 656
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 255 bits (625), Expect = 2e-66
Identities = 153/398 (38%), Positives = 214/398 (53%), Gaps = 12/398 (3%)
Query: 165 RNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIG 224
R + I VEG D P P+R FQ FP ++ + G +PTPIQ QG P L GRDMIG
Sbjct: 234 RRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIG 293
Query: 225 IAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRH 284
IA TGSGKTL + LP ++ Q + +GP LI+ P+RELA Q IQ
Sbjct: 294 IAQTGSGKTLSYLLPGLVHVGAQP---RLEQGDGPIVLILAPTRELAVQ----IQQ--ES 344
Query: 285 LKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCM 344
K RS GG + +++GV I++ATPGRL+DML+ L YL +
Sbjct: 345 GKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVL 404
Query: 345 DEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGA 404
DEADRM+DMGFE +R I + RQTL +SAT P+++++ AR L P V +G
Sbjct: 405 DEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPYKVIIGSPDL 464
Query: 405 -ASLTVRQDLEPAQPEARTVQLLHCLQKTPPPT--LIFAERKQDVDAVHEYLLLKGVEAV 461
A+ +++Q +E + +L L + LIF + K+D D V L + G A+
Sbjct: 465 KANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVTRQLRMDGWPAL 524
Query: 462 AIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+IHG K Q ER + F+ G+ ++ ATDVA++GLD +I+ VIN+D P +E+Y+HRI
Sbjct: 525 SIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGLDVKDIKCVINFDFPTTLEDYIHRI 584
Query: 522 XXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRV 559
+ R+LV +LREAGQ V
Sbjct: 585 GRTGRAGASGTAFTFFTLSNAKFSRNLVKILREAGQVV 622
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 254 bits (623), Expect = 4e-66
Identities = 152/403 (37%), Positives = 216/403 (53%), Gaps = 30/403 (7%)
Query: 174 GDDPPPPIRTFQHMKFPKGILRG-LEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGK 232
G + P P+R++ K GI+R + G ++PTPIQ +P L RD+IG+A TGSGK
Sbjct: 154 GGNIPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGIRDVIGVAETGSGK 213
Query: 233 TLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPE 292
T F +P+I + E + GPYGLI+ P+RELA Q D F L
Sbjct: 214 TASFLIPLISYICELPKLDERSKVNGPYGLILAPTRELAMQIKDEAVKFCAPLGF----- 268
Query: 293 IRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMID 352
+ +GG + E VQ+G ++VATPGRL+D++D++++ LN C Y+ MDEADRM+D
Sbjct: 269 -KVVSVVGGYSAQEQALAVQEGAELIVATPGRLLDVIDRRLLVLNQCCYVVMDEADRMVD 327
Query: 353 MGFEEDVRTIFSYFAGQ--------------------RQTLLFSATMPKKIQNFARSALV 392
MGFEE V+ + + RQT++++ATMP I+ A+ L
Sbjct: 328 MGFEEQVQKVLASLPSSNAKPDSDEAENLAAVSTRRYRQTMMYTATMPVAIEKLAKKYLR 387
Query: 393 RPVTVNVGRAGAASLTVRQDLEPAQ-PEARTVQLLHCLQKTP--PPTLIFAERKQDVDAV 449
RP V +G AG A TV Q +E E R +LL + K PP ++F K+D +AV
Sbjct: 388 RPGIVTIGSAGQAGSTVTQLVEFLNTDEKRKRRLLDIISKRQYRPPIVVFLNYKRDCEAV 447
Query: 450 HEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYD 509
+ L+ G IHGGK QE+R +AV+ +RG DVLVATDVA +GLD N+ V+N+
Sbjct: 448 SDALVAAGWRTAIIHGGKQQEQREQAVQHLKRGAVDVLVATDVAGRGLDIPNVSLVVNFQ 507
Query: 510 MPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLL 552
M +IE+Y HRI D VL +L ++
Sbjct: 508 MANNIESYTHRIGRTGRAGKRGTAVTFLGQEDDDVLFELKQMI 550
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 253 bits (620), Expect = 9e-66
Identities = 147/454 (32%), Positives = 237/454 (52%), Gaps = 16/454 (3%)
Query: 113 EEEHILESVAQSKA-LMGVAELAKGIQYEEPIKTSWRPPRCILELPETRHEMIRNKLRIL 171
++E ++ V ++KA + + + +K I+YE K + + I + + R +L +
Sbjct: 460 DDEEFMKRVKKTKAEKLSLVDHSK-IEYEPFRKNFYIEVKDISRMTQEEVNTYRKELELK 518
Query: 172 VEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSG 231
V G D P PI+ + IL ++ +KP PIQ Q +P +++GRD IG+A TGSG
Sbjct: 519 VHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSG 578
Query: 232 KTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSP 291
KTL F LP++ +Q P +GP GL++ P+REL +Q H I+ F + L
Sbjct: 579 KTLGFVLPMLRHIKDQP---PVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLG----- 630
Query: 292 EIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDML---DKKMVRLNVCRYLCMDEAD 348
IR GG V++ + +++G I+V TPGR++D+L K+ L +L MDEAD
Sbjct: 631 -IRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEAD 689
Query: 349 RMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLT 408
RM DMGFE + I +RQT+LFSAT P++++ AR L +PV + VG +
Sbjct: 690 RMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKD 749
Query: 409 VRQDLEPAQPEARTVQLLHCLQKTPPP--TLIFAERKQDVDAVHEYLLLKGVEAVAIHGG 466
+ Q +E R ++LL L + L+F + ++ DA++ ++ +++HGG
Sbjct: 750 ITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGG 809
Query: 467 KDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXX 526
KDQ +R + F+ ++L+AT VA++GLD ++ V+N+D P E+YVHR+
Sbjct: 810 KDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGR 869
Query: 527 XXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVP 560
D DLV L + Q VP
Sbjct: 870 AGRKGCAVTFISEDDAKYAPDLVKALELSEQPVP 903
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 252 bits (616), Expect = 3e-65
Identities = 151/419 (36%), Positives = 228/419 (54%), Gaps = 18/419 (4%)
Query: 155 ELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMK--FPKGILRGLEAKGIQKPTPIQVQG 212
+L E R + I + GDD PPP+ +F H+ P +L+ L A+ PTP+Q Q
Sbjct: 73 QLSEEEATKWREEHVITIFGDDCPPPMSSFDHLCGIVPPYLLKKLTAQNFTAPTPVQAQS 132
Query: 213 MPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAK 272
P +L+GRD++G+A TGSGKTL F +P + QE P +GP +++ P+RELA+
Sbjct: 133 WPVLLSGRDLVGVAKTGSGKTLGFMVPALAHIAVQE---PLRSGDGPMVVVLAPTRELAQ 189
Query: 273 QTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKK 332
Q + + I G C+ GG + ++++GVHI+VATPGRL+D LD K
Sbjct: 190 QIEEETKKVIPGDVYCG------CV-YGGAPKGPQLGLLRRGVHILVATPGRLIDFLDIK 242
Query: 333 MVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALV 392
+ L+ YL +DEADRM+DMGFE VR I RQT++FSAT P++IQ A
Sbjct: 243 RINLHRVTYLVLDEADRMLDMGFEPQVRKICGQIRPDRQTVMFSATWPREIQRLAAEFQK 302
Query: 393 RPVTVNVGRAG-AASLTVRQDLEPAQPEARTVQLLHCLQK-TPPPTLIFAERKQDVDAVH 450
+ + ++VG A+ V Q Q A+ +L +Q+ L+F + K+ D +
Sbjct: 303 QWIRISVGSTELQANKDVTQRFILTQEFAKQDELRKLMQEHREERVLVFCKMKRTADELE 362
Query: 451 EYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDM 510
L G +A+AIHG K+Q +R + FR+ + LVATDVA++GLD ++ VINYD
Sbjct: 363 RQLRRWGYDAMAIHGDKEQRQREFILARFRKDPRLCLVATDVAARGLDIKQLETVINYDF 422
Query: 511 PEDIENYVHRIXXXXXXXXXXXXXXXXXXPD----HSVLRDLVHLLREAGQRVPGFLLD 565
P I++YVHRI + SVL++L+ +L A Q +P ++++
Sbjct: 423 PMQIDDYVHRIGRTGRAGGEGRCVYLITKKEAQITPSVLKELIGILERAQQEIPDWMIE 481
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 251 bits (615), Expect = 4e-65
Identities = 147/402 (36%), Positives = 228/402 (56%), Gaps = 20/402 (4%)
Query: 180 PIRTFQHMK-FPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTL 238
P+++F ++ + +L + ++PTP+Q +P VLNGRD++ A TGSGKT F
Sbjct: 198 PMQSFMELEGIHEILLDNIRRVKYERPTPVQKFSIPTVLNGRDLMACAQTGSGKTAAFLF 257
Query: 239 PIIMFCLE-------QEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSP 291
PI+M L Q+ + R P L++ P+RELA QT++ + F TG
Sbjct: 258 PIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELAIQTYEESRKFCFG---TG-- 312
Query: 292 EIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMI 351
IR+ + GG V + + +G I+VATPGRL D++D+ V L + ++L +DEADRM+
Sbjct: 313 -IRTNVLYGGSEVRSQIMDLDRGSDIIVATPGRLRDLIDRGKVNLKLIKFLILDEADRML 371
Query: 352 DMGFEEDVRTIFS-----YFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAAS 406
DMGF +R I + RQT++FSAT P++IQ A+ L + + VGR GA S
Sbjct: 372 DMGFAPQIREIVEDSEMPHSLDGRQTVMFSATFPREIQQLAKDFLHNYIFLTVGRVGATS 431
Query: 407 LTVRQDLEPAQPEARTVQLLHCL-QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHG 465
++ Q + A+ + + L+ L ++ T++F E K+ D + ++L+ + AV+IHG
Sbjct: 432 GSIVQRVVYAEEDHKPRLLVKLLLEQGEGLTVVFVEMKRRADQIEDFLIDQNFPAVSIHG 491
Query: 466 GKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXX 525
+ Q+ER A+ FR G++ +LVATDVA++GLD NI HVIN DMP +I++YVHRI
Sbjct: 492 DRSQQEREHALRLFRSGQRPILVATDVAARGLDIPNITHVINLDMPCNIDDYVHRIGRTG 551
Query: 526 XXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDML 567
+ +LRDL+ L E+GQ P + DM+
Sbjct: 552 RAGNTGLATSFVNESNKPILRDLLAALEESGQDAPEWFQDMV 593
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 251 bits (615), Expect = 4e-65
Identities = 143/389 (36%), Positives = 218/389 (56%), Gaps = 16/389 (4%)
Query: 178 PPPIRTFQHM--KFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLV 235
P P++TF+ ++P+ +L ++ +G KP+PIQ Q P +L G D+IGIA TG+GKTL
Sbjct: 318 PNPVQTFEQAFHEYPE-LLEEIKKQGFAKPSPIQAQAWPVLLKGEDLIGIAQTGTGKTLA 376
Query: 236 FTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTH-DIIQHFIRHLKLTGSPEIR 294
F LP + Q V R GP L++ P+RELA Q ++ ++ R +K
Sbjct: 377 FLLPAFIHIEGQPVPRGEARG-GPNVLVMAPTRELALQIEKEVFKYQFRDIKAI------ 429
Query: 295 SCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMG 354
CL GG ++ + V+ GV I++ATPGRL D++ ++ + YL +DEADRM+DMG
Sbjct: 430 -CLYGGGDRRTQ-INKVKGGVEIIIATPGRLNDLVAANVIDITSITYLVLDEADRMLDMG 487
Query: 355 FEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG-AASLTVRQDL 413
FE +R + RQT++ SAT P ++ A+S + PV V VG AA+ TV Q +
Sbjct: 488 FEPQIRKLLLDIRPDRQTIMTSATWPPGVRRLAQSYMSNPVQVYVGTLDLAATHTVTQQI 547
Query: 414 EPAQPEARTVQLLHCLQKTPPP--TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEE 471
E E + +++++ + P +IF RK D + +L G+ ++HG ++Q +
Sbjct: 548 EVIDEEDKYMRVMNFVTNMGPSDKVIIFCGRKTRADDLSSEFVLSGINCTSLHGDREQAD 607
Query: 472 RSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXX 531
R +A+E + G+ VL+ATDVAS+GLD +I HV+NYD P +IE YVHR+
Sbjct: 608 REQALEDIKSGDVRVLIATDVASRGLDIEDISHVVNYDFPRNIEEYVHRVGRTGRAGRSG 667
Query: 532 XXXXXXXXPDHSVLRDLVHLLREAGQRVP 560
D +V DL+ +L EA Q VP
Sbjct: 668 VSLSFFTRGDWAVASDLIKILEEADQEVP 696
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 251 bits (614), Expect = 5e-65
Identities = 146/430 (33%), Positives = 216/430 (50%), Gaps = 30/430 (6%)
Query: 155 ELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMP 214
E+ + + R I ++G PPPIR ++ +L+ ++ +KPTPIQ+Q +P
Sbjct: 671 EMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIP 730
Query: 215 AVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQT 274
L RD+IGIA TGSGKT F LP++ + + +GPY L+I PSRELA Q
Sbjct: 731 IALEMRDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQI 790
Query: 275 HDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMV 334
++ F + R+ +GG +++GV I++ TPGRL D L+K
Sbjct: 791 YEETNKFASYC------SCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYT 844
Query: 335 RLNVCRYLCMDEADRMIDMGFEEDVRTIFSYF---------------------AGQ---R 370
LN C Y+ +DEADRM+DMGFE+ V I AG R
Sbjct: 845 VLNQCNYVILDEADRMMDMGFEDTVHYILDKIPTSNLKSEDDALALQEEMMTKAGHRLYR 904
Query: 371 QTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQ 430
T +FSATMP ++ +R L P +++G GA ++ Q LE + +L L+
Sbjct: 905 LTQMFSATMPPSVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFLTEGKKKQKLQEILE 964
Query: 431 KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVAT 490
PP ++F +K+ D + + + +AVA+HGGK QE R + + AF+ E D+LVAT
Sbjct: 965 MYEPPIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDILVAT 1024
Query: 491 DVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVH 550
DVA +G+D ++ VIN+DMP+DIE+Y HRI D + DL
Sbjct: 1025 DVAGRGIDVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFITEHDSHLFYDLKQ 1084
Query: 551 LLREAGQRVP 560
L + VP
Sbjct: 1085 FLISSNNIVP 1094
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 250 bits (613), Expect = 6e-65
Identities = 143/427 (33%), Positives = 222/427 (51%), Gaps = 12/427 (2%)
Query: 144 KTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQ 203
K ++ I + + R ++V+G + P PI+ F+ F ++ L KG
Sbjct: 49 KNFYQEAESISRMTPSEVSSFRKTNEMIVKGTNVPHPIQKFEEAGFSSEVVSSLVEKGFS 108
Query: 204 KPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLI 263
+PT IQ QG P L+GRDM+GIA TGSGKTL F LP ++ +Q+ P R +GP L+
Sbjct: 109 EPTAIQGQGWPMALSGRDMVGIAQTGSGKTLSFILPALVHAKDQQ---PLRRGDGPIVLV 165
Query: 264 ICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPG 323
+ P+REL Q ++ F G +RS GG + + + +G +++ATPG
Sbjct: 166 LAPTRELVMQIKKVVDEFC------GMFNLRSTAVYGGASSQPQIRALHEGAEVVIATPG 219
Query: 324 RLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKI 383
RL+D+ D+ L+ +L +DEADRM+DMGFE +R I RQTL++SAT P+++
Sbjct: 220 RLIDLHDQGHAPLSRVTFLVLDEADRMLDMGFEPQLRKIIPKTNANRQTLMWSATWPREV 279
Query: 384 QNFARSALVRPVTVNVGRAG-AASLTVRQDLEPAQPEARTVQLLHCLQK-TPPPTLIFAE 441
+ A S + + V VG + ++Q +E + +L+ L ++F
Sbjct: 280 RGLAESYMNEYIQVVVGNEELKTNSKIKQIVEVCSGREKEDKLIGVLDNFKGDKVIVFCN 339
Query: 442 RKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFAN 501
K+ D + L G A A+HG K Q R + ++ FR G + +L+AT+VA +GLD +
Sbjct: 340 MKRTCDDLEYVLNRSGYGAAALHGDKSQNIRDKVLDDFRSGRRPILIATEVAGRGLDVND 399
Query: 502 IQHVINYDMPEDIENYVHRI-XXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVP 560
++ VIN+D P E+YVHRI D + R+L+ +LREA Q VP
Sbjct: 400 VKLVINFDFPGSCEDYVHRIGRTARGNTKEGISHTFFTVGDKANARELIRMLREANQTVP 459
Query: 561 GFLLDML 567
L DM+
Sbjct: 460 SDLEDMV 466
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 250 bits (612), Expect = 8e-65
Identities = 166/571 (29%), Positives = 273/571 (47%), Gaps = 47/571 (8%)
Query: 20 EEKSDSDEDVDNYEPYVPIKEXXXXXXXXXXXXXXXTAEAAADTKSSSENDHDDETSQEE 79
+ K D +ED DN E + + + K + D ++TSQ+
Sbjct: 137 DRKRDRNEDSDNEEDVSKMADAVKDRYLGKQKEKKKRGRRLHEKKFVFDWDAGEDTSQD- 195
Query: 80 WGRRYNVSLLDQHXXXXXXXXXXXXXXXXXXXXEEEHILESVAQSKALMGVAE-----LA 134
YN +H E+ + + +++ + E L
Sbjct: 196 ----YNKLYQSRHEIQFFGRGSVAGTDVNAQKKEKNSFYQEMMENRRTVDEKEQEMHRLE 251
Query: 135 KGIQYEEPIKTS---WRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPK 191
K ++ E+ + WR + E+ + + R I ++G P P+R ++ FP
Sbjct: 252 KELKKEKKVAHDDRHWRMKE-LSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPD 310
Query: 192 GILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLE-QEVK 250
+ + ++ G +PTPIQ Q +P L RD+IG+A TGSGKT F LP++++ +++
Sbjct: 311 EVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKME 370
Query: 251 MPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEV 310
R+ GPY +I+ P+RELA+Q + F KL G I++ IGG + +
Sbjct: 371 RQEHRDLGPYAIIMAPTRELAQQIEEETNKFG---KLLG---IKTVSVIGGASREDQGMK 424
Query: 311 VQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAG-- 368
++ GV +++ATPGRL+D+L+ + + LN C Y+ +DEADRM+DMGFE DV+ + Y
Sbjct: 425 LRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYMPDTN 484
Query: 369 -----------------------QRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAA 405
RQT++F+ATM I+ AR L RP V++G AG
Sbjct: 485 MKKDTDEFDNEEALMKGFSTREKYRQTVMFTATMSSAIERLARQYLRRPAVVHIGSAGKP 544
Query: 406 SLTVRQDLEPAQPEARTVQLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIH 464
+ V Q + + + +L+ L+ + PP +IF +K+ D + + L G + +H
Sbjct: 545 TERVEQVVYMVPEDRKRKKLVEVLESQFQPPIIIFVNQKKGADMLSKGLTKLGFKPTVLH 604
Query: 465 GGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXX 524
GGK Q++R A++A + G D+LVATDVA +G+D ++ V+NYDM + IE+Y HRI
Sbjct: 605 GGKGQDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRT 664
Query: 525 XXXXXXXXXXXXXXXPDHSVLRDLVHLLREA 555
D +V DL +L E+
Sbjct: 665 GRAGKHGKAITFLTPDDTAVYFDLKQVLVES 695
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 250 bits (612), Expect = 8e-65
Identities = 151/413 (36%), Positives = 216/413 (52%), Gaps = 15/413 (3%)
Query: 158 ETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVL 217
E E K I V G PPP+ +F+ P +LR + + G P+PIQ Q P +
Sbjct: 137 ELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAM 196
Query: 218 NGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDI 277
RD++ IA TGSGKTL + +P M Q + GP L++ P+RELA Q
Sbjct: 197 QNRDIVAIAKTGSGKTLGYLIPGFMHL--QRIHND--SRMGPTILVLSPTRELATQ---- 248
Query: 278 IQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLN 337
IQ + LK S +I GG ++ +++GV I+VATPGRL D+L+ K + L+
Sbjct: 249 IQ--VEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLH 306
Query: 338 VCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTV 397
YL +DEADRM+DMGFE +R I + +RQTL+++AT PK+++ A LV P V
Sbjct: 307 QVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQV 366
Query: 398 NVGRAG--AASLTVRQDLEPAQPEARTVQLLHCLQKTPPPT--LIFAERKQDVDAVHEYL 453
N+G A+ ++ Q +E P + +L L+ P + +IF K+ D +
Sbjct: 367 NIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQLARN- 425
Query: 454 LLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPED 513
L + A AIHG K Q ER + FR G VLVATDVA++GLD +I+ V+NYD P
Sbjct: 426 LTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNG 485
Query: 514 IENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
+E+YVHRI D DL+ +L A Q+VP + +M
Sbjct: 486 VEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVREM 538
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 249 bits (610), Expect = 1e-64
Identities = 145/365 (39%), Positives = 204/365 (55%), Gaps = 18/365 (4%)
Query: 204 KPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIR-NEGPYGL 262
+PT IQVQG P L+G DMIGIA TGSGKTL F LP ++ Q P +R +GP L
Sbjct: 10 EPTAIQVQGWPVALSGHDMIGIAETGSGKTLGFLLPAMIHIRAQ----PLLRYGDGPICL 65
Query: 263 IICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATP 322
++ P+REL +Q + F KL R+ GGV ++ GV I +A P
Sbjct: 66 VLAPTRELVEQIREQANQFGSIFKL------RNTAIYGGVPKRPQQASIRNGVEICIACP 119
Query: 323 GRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKK 382
GRL+D+L++ L+ YL +DEADRM+DMGFE +R + S RQTLL+SAT PK+
Sbjct: 120 GRLIDLLEEGYTNLSRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTLLWSATWPKE 179
Query: 383 IQNFARSALVR-PVTVNVGRAGA--ASLTVRQDL---EPAQPEARTVQLL-HCLQKTPPP 435
+Q AR P+ +NVG A AS ++Q + E ++ +AR L + ++ P
Sbjct: 180 VQKLARDLCKEIPIHINVGSVDALKASHNIKQYVNVVEESEKKARLKMFLGQVMVESAPK 239
Query: 436 TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASK 495
LIF E K+ D + + L L G A+ IHG K QEER+ + FR G +++ATDVA++
Sbjct: 240 VLIFCETKRGADILTKELRLDGWPALCIHGDKKQEERTWVLNEFRTGASPIMIATDVAAR 299
Query: 496 GLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREA 555
GLD +I VIN+D P IE+Y+HRI + + DL+ +L+EA
Sbjct: 300 GLDIKDINFVINFDFPNQIEDYIHRIGRTGRAGATGVSLSFFTPDKYRMASDLIKVLKEA 359
Query: 556 GQRVP 560
QR+P
Sbjct: 360 KQRIP 364
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 249 bits (610), Expect = 1e-64
Identities = 145/440 (32%), Positives = 219/440 (49%), Gaps = 25/440 (5%)
Query: 139 YEEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLE 198
++ + W R + E+ E + R I +G P P+R+++ K +L+ +E
Sbjct: 271 FDMRVDRHWSDKR-LEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVE 329
Query: 199 AKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEG 258
G +KP+PIQ+ +P L RD+IGIA TGSGKT F LP++ + EG
Sbjct: 330 RAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEG 389
Query: 259 PYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIM 318
PY +++ P+RELA+Q + F +L R +GG ++ E + +G I+
Sbjct: 390 PYAVVMAPTRELAQQIEEETVKFAHYL------GFRVTSIVGGQSIEEQGLKITQGCEIV 443
Query: 319 VATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQ--------- 369
+ATPGRL+D L+++ LN C Y+ +DEADRMIDMGFE V +
Sbjct: 444 IATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEE 503
Query: 370 --------RQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEAR 421
R T +FSATMP ++ AR L PV V +G AG + + Q + + +
Sbjct: 504 ELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEK 563
Query: 422 TVQLLHCLQKTPPPT-LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
+L L + T ++F K++ D++ + L G +HGGK QE+R ++E FR
Sbjct: 564 FFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFR 623
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXP 540
+VLVATDV +G+D ++ HVINYDMP+ IE Y HRI
Sbjct: 624 AKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLH 683
Query: 541 DHSVLRDLVHLLREAGQRVP 560
D V DL +L ++ VP
Sbjct: 684 DTEVFYDLKQMLVQSNSAVP 703
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase
PRP28, putative; n=2; Eukaryota|Rep: Pre-mRNA splicing
factor RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 249 bits (609), Expect = 2e-64
Identities = 146/430 (33%), Positives = 215/430 (50%), Gaps = 30/430 (6%)
Query: 155 ELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMP 214
E+ + + R I ++G PPPIR ++ +L+ ++ +KPTPIQ+Q +P
Sbjct: 554 EMTDRDWRIFREDNEIYIKGGIVPPPIRRWEESNLSSDLLKAIKKAKYEKPTPIQMQAIP 613
Query: 215 AVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQT 274
L RD+IGIA TGSGKT F LP++ + + +GPY LII PSRELA Q
Sbjct: 614 IALEMRDLIGIAETGSGKTAAFVLPMLAYVKQLPPLTYETSQDGPYALIIAPSRELAIQI 673
Query: 275 HDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMV 334
D F + R+ +GG ++KGV I++ TPGR+ D L+K
Sbjct: 674 FDETNKFASYC------SCRTVAVVGGRNAEAQAFELRKGVEIIIGTPGRIHDCLEKAYT 727
Query: 335 RLNVCRYLCMDEADRMIDMGFEEDVRTIFSYF---------------------AGQ---R 370
LN C Y+ +DEADRM+DMGFE+ V I AG R
Sbjct: 728 VLNQCNYVILDEADRMMDMGFEDSVHFILDKIPTTNLKSEDDALALQEEMMAKAGHRLYR 787
Query: 371 QTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQ 430
T +FSATMP ++ +R L P +++G GA ++ Q LE + +L L+
Sbjct: 788 LTQMFSATMPPAVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFTTEGKKKQKLQEILE 847
Query: 431 KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVAT 490
+ P ++F +K+ D + + + AVA+HGGK QE R + + +F+ G+ D+LVAT
Sbjct: 848 EYEAPIIVFVNQKKVADIIAKSISKMKFRAVALHGGKAQELREQTLNSFKNGDFDILVAT 907
Query: 491 DVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVH 550
DVA +G+D ++ VIN+DMP+DIE+Y HRI D + DL
Sbjct: 908 DVAGRGIDVQGVKLVINFDMPKDIESYTHRIGRTGRAGMKGMAISFVTEQDSHLFYDLKQ 967
Query: 551 LLREAGQRVP 560
L + VP
Sbjct: 968 FLISSNNIVP 977
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 248 bits (607), Expect = 3e-64
Identities = 146/381 (38%), Positives = 210/381 (55%), Gaps = 13/381 (3%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPI 240
+ TFQ +K + + L + + PTPIQ Q +PA L GRD++G A TG+GKT LPI
Sbjct: 1 MNTFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPI 60
Query: 241 IMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIG 300
+ + K I + P L++ P+RELA Q D + RHLKL RS L G
Sbjct: 61 LNQLGKNSRKS--IPHH-PLALVLAPTRELAIQIGDSFDAYGRHLKL------RSVLIYG 111
Query: 301 GVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVR 360
GV ++ +++G HI+VATPGRL+D++++ ++LN +DEADRM+DMGF D++
Sbjct: 112 GVGQGNQVKALKRGAHILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLK 171
Query: 361 TIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEA 420
I + QRQ+L FSAT+ KI A S L +PVTVNV + ++Q L +
Sbjct: 172 RIITQLPTQRQSLFFSATLAPKITELAHSLLSKPVTVNVTPKTTSVEKIQQQLMFVERNF 231
Query: 421 RTVQLLHCL-QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAF 479
+ L L L+F + K+ + + + L+ G +A AIHG K Q R +A+EAF
Sbjct: 232 KQPLLQKILGGDEVERALVFTKTKRTANTLSQRLVRSGFKATAIHGNKSQGARQQALEAF 291
Query: 480 RRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXX 539
RR + VLVATDVA++G+D I HVIN+D+P + E YVHRI
Sbjct: 292 RRKQVQVLVATDVAARGIDIDGITHVINFDLPVEPEAYVHRIGRTGRAGANGIAISFCSE 351
Query: 540 PDHSVLRDLVHLLREAGQRVP 560
+ LR + L+ GQ+VP
Sbjct: 352 SERKELRSIERLI---GQKVP 369
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 248 bits (607), Expect = 3e-64
Identities = 139/384 (36%), Positives = 213/384 (55%), Gaps = 13/384 (3%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F + ILR + +G ++PTPIQ Q +PAVL GRD++ A TG+GKT FTLP++
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 243 FCLEQEVKMPFIRNEGPY-GLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGG 301
+ ++ P + P LI+ P+RELA Q + ++ + ++L IRS + GG
Sbjct: 62 HLITRQ---PHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN------IRSLVVFGG 112
Query: 302 VAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRT 361
V+++ M ++ GV ++VATPGRL+D+ + V+L+ L +DEADRM+DMGF D+R
Sbjct: 113 VSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRR 172
Query: 362 IFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEAR 421
+ + +RQ LLFSAT I+ A L P+ + V R AS V Q + + +
Sbjct: 173 VLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRK 232
Query: 422 TVQLLHCLQK-TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
L H + K L+F K + + E L G+ + AIHG K Q R+RA+ F+
Sbjct: 233 RELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFK 292
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXP 540
G+ VLVATD+A++GLD + HV+NY++P E+YVHRI
Sbjct: 293 SGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVD 352
Query: 541 DHSVLRDLVHLLREAGQR--VPGF 562
+H +LRD+ LL++ R +PG+
Sbjct: 353 EHKLLRDIEKLLKKEIPRIAIPGY 376
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 248 bits (606), Expect = 4e-64
Identities = 141/399 (35%), Positives = 216/399 (54%), Gaps = 16/399 (4%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPI 240
+ +F +K + + +PTP+Q +P ++ RD++ A TGSGKT F +P+
Sbjct: 210 VTSFLELKLHPIVSHNISLTQYTRPTPVQRYAVPIIMQRRDLMACAQTGSGKTAAFLIPL 269
Query: 241 IMFCLEQ----EVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSC 296
+ + + + E P LI+ P+RELA Q +D + F + L +R C
Sbjct: 270 LSMMYQDGPGNSLSHSGYKKEYPVALILAPTRELAVQIYDEARKF-SYRSL-----VRPC 323
Query: 297 LAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFE 356
+ GG + ++ + +G +++VATPGRL DML++ + L+ RYL +DEADRM+DMGFE
Sbjct: 324 VVYGGRDIRGQLQDISQGCNMLVATPGRLSDMLERCKIGLDCIRYLVLDEADRMLDMGFE 383
Query: 357 EDVRTIFSYF----AGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQD 412
+R I GQRQTL+FSAT P++IQ A L + + VG+ G+ S + Q
Sbjct: 384 PQIRKIVEQTNMPPPGQRQTLMFSATFPREIQMLASDFLKDYLFLRVGKVGSTSQNITQR 443
Query: 413 LEPAQPEARTVQLLHCLQKTPPPTLI--FAERKQDVDAVHEYLLLKGVEAVAIHGGKDQE 470
+ + LL L +LI F E K+ DA+ +L +G +IHG + Q
Sbjct: 444 IVYVDENEKRDHLLDILTDIDSDSLILVFVETKRGADALEGFLHTEGSCVASIHGDRSQS 503
Query: 471 ERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXX 530
+R A+++FR G +LVAT VA++GLD N++ VINYD+P DIE YVHRI
Sbjct: 504 DRELALQSFREGSTPILVATRVAARGLDIPNVKFVINYDLPTDIEEYVHRIGRTGRVGNL 563
Query: 531 XXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGE 569
+++V ++LV +L EA Q VP +L D +GE
Sbjct: 564 GEAISFYTDKNNNVAKELVDILLEANQIVPDWLRDKIGE 602
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 247 bits (605), Expect = 6e-64
Identities = 144/432 (33%), Positives = 230/432 (53%), Gaps = 18/432 (4%)
Query: 144 KTSWRPPRCILELPETRHEMIRNKLR-ILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGI 202
K + P + E+ E +R +L I V G D P P++ + L + G
Sbjct: 515 KNFYTEPTELAEMTEAEIADLRLELDGIKVAGKDVPKPVQKWSQCGLDVKSLDVITKLGY 574
Query: 203 QKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGL 262
++PT IQ+Q +PA+++GRD+IG+A TGSGKT+ F LP+ +Q P ++GP GL
Sbjct: 575 ERPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQR---PLKGSDGPIGL 631
Query: 263 IICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATP 322
I+ P+RELA Q H + F++ + L R+ A GG + + + +++G I+V TP
Sbjct: 632 IMTPTRELATQIHKECKPFLKAMGL------RAVCAYGGAIIKDQIADLKRGAEIIVCTP 685
Query: 323 GRLMDML---DKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATM 379
GR++++L ++ L Y+ +DEADRM DMGFE V +F+ RQT+LFSATM
Sbjct: 686 GRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFNNIRPNRQTILFSATM 745
Query: 380 PKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEA---RTVQLLHCLQKTPPP- 435
P+ + A+ L PV + VG + + Q +E + + R ++LL L T
Sbjct: 746 PRIMDALAKKTLQSPVEIVVGGRSVVAPEITQIVEVREEKEKFHRLLELLGELYNTDEDA 805
Query: 436 -TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVAS 494
TLIF +R++ D + + L+ KG ++IHGGKDQ +R ++ F+ G +++AT VA+
Sbjct: 806 RTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGVVPIMIATSVAA 865
Query: 495 KGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLRE 554
+GLD ++ V+N+D P +E+YVHR + L +
Sbjct: 866 RGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQEQYSVGIAKALEQ 925
Query: 555 AGQRVPGFLLDM 566
+GQ VP L +M
Sbjct: 926 SGQEVPDRLNEM 937
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 247 bits (605), Expect = 6e-64
Identities = 140/403 (34%), Positives = 226/403 (56%), Gaps = 27/403 (6%)
Query: 137 IQYEEPIKTSWRPPRCILELPETRHEMIRNKL-RILVEGDDPPPPIRTFQHMKFPKGILR 195
I+Y + K ++ P + + +M+R +L + G + PPP T+ + P+ ++
Sbjct: 341 IEYPKFRKHFYQVPFEMSTMDNRELDMLRLELDNVRARGKNVPPPFLTWGQLLMPESVMS 400
Query: 196 GLEAK-GIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFI 254
++ G KP+PIQ Q +P VL+GRDMIG+A TGSGKTL + LP++ +Q P
Sbjct: 401 VIQNDLGFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKP-- 458
Query: 255 RNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKG 314
EGP GL++ P+RELA Q I LK + + +++ C GG + + +++G
Sbjct: 459 -GEGPIGLVLSPTRELALQIEKEI------LKFSSTMDLKVCCCYGGSNIENQISELKRG 511
Query: 315 VHIMVATPGRLMDMLDKKMVRLNVCR---YLCMDEADRMIDMGFEEDVRTIFSYFAGQRQ 371
V+++VATPGRL+D+L R+ R ++ +DEADRM DMGFE ++ IF+ +Q
Sbjct: 512 VNVIVATPGRLIDLLAANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQIRPDKQ 571
Query: 372 TLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDL----EPAQPEARTVQLLH 427
T+LFSAT P+K++ A+ L P+ + VG + + Q++ + Q +Q L
Sbjct: 572 TVLFSATFPRKLEQLAKKVLHNPIEIIVGGVSVVASEISQEIILFEDTDQLMNHKIQKLE 631
Query: 428 -------CLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
L K L+F E++ D D + LL K + +AIHGGKDQ +R A+ F
Sbjct: 632 DILSRFFDLGKNTGKVLVFVEKQTDADKLVSVLLKKAIPCIAIHGGKDQIDRKHAIREFS 691
Query: 481 RGEK--DVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ +VL+AT +A++GLD N+ V+N++ P +E+YVHR+
Sbjct: 692 DDQSGINVLIATSIAARGLDVRNLDLVVNFEPPSHLEDYVHRV 734
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 246 bits (603), Expect = 1e-63
Identities = 146/427 (34%), Positives = 220/427 (51%), Gaps = 19/427 (4%)
Query: 166 NKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGI 225
+ + + G+D PPPI +F + ++ G KPTP+Q G+P +L+GRD++
Sbjct: 286 DSIEVKTSGEDVPPPISSFDEANLRVLLNTNIKKSGYTKPTPVQKYGIPILLSGRDLMAC 345
Query: 226 AFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEG---PYGLIICPSRELAKQTHDIIQHFI 282
A TGSGKT F +PII L ++ + + + P LII P+REL IQ F
Sbjct: 346 AQTGSGKTAAFLIPIIHTLLAKDRDLSDMSSANQVEPRALIISPTRELT------IQIFD 399
Query: 283 RHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYL 342
K + ++ + GG + S M+ + +GV I+VATPGRL+D++ K + + ++
Sbjct: 400 EARKFSKDSVLKCHIIYGGTSTSHQMKQIFQGVDILVATPGRLLDLVGKGKITFDAIEFV 459
Query: 343 CMDEADRMIDMGFEEDVRTIFSYFA----GQRQTLLFSATMPKKIQNFARSALVRPVTVN 398
+DEADRM+DMGF DV + + G+RQTL+FSAT P++IQ A L V V
Sbjct: 460 VLDEADRMLDMGFLPDVEKVLRHDTMKPPGERQTLMFSATFPQEIQQLAAKFLNNYVFVT 519
Query: 399 VGRAGAASLTVRQDLEPAQPEARTVQLLHCL-----QKTPPPTLIFAERKQDVDAVHEYL 453
VG G+A + Q + + +L L Q L+F K+ D + L
Sbjct: 520 VGIVGSACTDIEQSFFEVKKSDKRTKLKELLNEEIEQNMLNGILVFVSEKKTADFIAALL 579
Query: 454 LLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPED 513
+IHG + Q ER A+ F+ G+ +LVAT VA++GLD N++HVINYD+P++
Sbjct: 580 SEDNFPTTSIHGDRLQREREEALYDFKTGKMAILVATAVAARGLDIKNVRHVINYDLPKE 639
Query: 514 IENYVHRIXXXXXXXXXXXXXXXXX-XPDHSVLRDLVHLLREAGQRVPGFLLDMLGEPDV 572
I+ Y+HRI D + DLV +L +AGQ VP +L GE +
Sbjct: 640 IDEYIHRIGRTGRVGNKGKATSFFDPRYDEKLQGDLVRVLTQAGQEVPDWLASGAGESNY 699
Query: 573 PAPAGQG 579
P+ G
Sbjct: 700 DGPSDFG 706
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 246 bits (602), Expect = 1e-63
Identities = 149/438 (34%), Positives = 233/438 (53%), Gaps = 19/438 (4%)
Query: 166 NKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGI 225
+ +++ V GD+ P PI +F+ +L ++ G +KPTP+Q +P ++NGRD++
Sbjct: 180 DNIQVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMAC 239
Query: 226 AFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNE-GPYGLIICPSRELAKQTHDIIQHFIRH 284
A TGSGKT F +PII LE+ V + P +I+ P+REL IQ + +
Sbjct: 240 AQTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELT------IQIWQQI 293
Query: 285 LKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCM 344
+K + + +++ +A GG +V + G HI+VATPGRL+D ++K V+ + ++L +
Sbjct: 294 VKFSLNSILKTVVAYGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVL 353
Query: 345 DEADRMIDMGFEEDVRTIFSYFA----GQRQTLLFSATMPKKIQNFARSALVRPVTVNVG 400
DEADRM+DMGF + + + G+RQTL+FSAT P ++Q+ AR L + + VG
Sbjct: 354 DEADRMLDMGFLPSIEKMVDHETMVPLGERQTLMFSATFPDEVQHLARRFLNNYLFLAVG 413
Query: 401 RAGAASLTVRQDLEPAQPEARTVQLLHCLQK-----TPPPTLIFAERKQDVDAVHEYLLL 455
G A V Q+ + L L++ T TL+F E K+ D + +L
Sbjct: 414 IVGGACSDVEQNFYEVARNKKKDLLKEILERENDSGTLGGTLVFVEMKKKADFIAVFLSE 473
Query: 456 KGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIE 515
+IHG + Q +R A+ F+ G +LVAT VA++GLD N+ HVINYD+P+ I+
Sbjct: 474 NNYPTTSIHGDRLQRQREEALADFKSGRMSILVATAVAARGLDIKNVSHVINYDLPKGID 533
Query: 516 NYVHRIXXXXXXXXXXXXXXXXXXPDHSVLR-DLVHLLREAGQRVPGFLLDMLGEPDVPA 574
YVHRI + + LR DLV +L++A Q VP ++ M G +
Sbjct: 534 EYVHRIGRTGRVGNRGRATSFFDPEEDAPLRGDLVRILKQANQSVPDWM--MGGNANRNF 591
Query: 575 PAGQGCSYCAGLGHRITE 592
G+G S G R +E
Sbjct: 592 MPGRGISKFGGEDVRESE 609
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 246 bits (602), Expect = 1e-63
Identities = 153/409 (37%), Positives = 220/409 (53%), Gaps = 15/409 (3%)
Query: 162 EMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRD 221
E+ R + + G++ P P TF+ P ILR L + G PTPIQ Q P L RD
Sbjct: 415 EIYRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRD 474
Query: 222 MIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHF 281
++ IA TGSGKTL + +P F L + + RN GP LI+ P+RELA Q D F
Sbjct: 475 IVAIAKTGSGKTLGYLIPA--FILLRHCRNDS-RN-GPTVLILAPTRELATQIQDEALRF 530
Query: 282 IRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRY 341
R +++ + CL GG ++ +++G I+VATPGRL D+L+ KM+
Sbjct: 531 GRSSRISCT-----CL-YGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSL 584
Query: 342 LCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGR 401
L +DEADRM+DMGFE +R I + +RQTL+++AT PK+++ A LV PV VN+GR
Sbjct: 585 LVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGR 644
Query: 402 AG--AASLTVRQDLE--PAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKG 457
AA+ + Q +E P + R ++ + Q+ +IF K+ D + + +
Sbjct: 645 VDELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLAR-SVGRH 703
Query: 458 VEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENY 517
AV IHG K Q ER + FR G+ VL+ATDVA++GLD +I+ VINYD P +E+Y
Sbjct: 704 FGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDY 763
Query: 518 VHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
VHRI D DL+ +L A Q+VP + D+
Sbjct: 764 VHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDI 812
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 246 bits (601), Expect = 2e-63
Identities = 147/404 (36%), Positives = 217/404 (53%), Gaps = 18/404 (4%)
Query: 172 VEGDDP-PPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGS 230
V G +P P +FQ M +L + G PTP+Q +P V+NGRD++ A TGS
Sbjct: 250 VSGAEPIQPAAESFQSMNLRPLLLENIVKAGYGCPTPVQKYTIPNVMNGRDIMACAQTGS 309
Query: 231 GKTLVFTLPIIMFCLEQEVKM-PFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTG 289
GKT F LP++ + L+ F P GL+ICP+RELA IQ K +
Sbjct: 310 GKTAAFLLPMLHYILDNNCPSNAFEEPAQPTGLVICPTRELA------IQIMREARKFSH 363
Query: 290 SPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADR 349
S + C+A GG A ++ + G HI+VATPGRL+D L+K + + +YL +DEADR
Sbjct: 364 SSVAKCCVAYGGAAGFHQLKTIHSGCHILVATPGRLLDFLEKGKIVFSSLKYLVLDEADR 423
Query: 350 MIDMGFEEDVRTIFSYFA----GQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAA 405
M+DMGF ++T+ ++ +R TL+FSAT P +IQ A + L + V VG GAA
Sbjct: 424 MLDMGFLSSIKTVINHKTMTPTAERITLMFSATFPHEIQELASAFLNNYLFVVVGTVGAA 483
Query: 406 SLTVRQDL---EPAQPEARTVQLLH--CLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEA 460
+ V+Q++ + +A+ V++ + L+F E+K+ D V YL K A
Sbjct: 484 NTDVKQEVLCVPKFEKKAKLVEMCEEILISADDEKILVFVEQKRVADFVGTYLCEKKFRA 543
Query: 461 VAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHR 520
+HG + Q +R +A+ FR G ++LVAT V ++GLD I V+NYD+P+DI+ YVHR
Sbjct: 544 TTMHGDRYQAQREQALSEFRTGVHNILVATAVTARGLDIKGIGVVVNYDLPKDIDEYVHR 603
Query: 521 I-XXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFL 563
I D + +DLV +L EA Q +P +L
Sbjct: 604 IGRTGRLGNRGLSISFYDDETDACLTKDLVKVLSEANQTIPDWL 647
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 245 bits (599), Expect = 3e-63
Identities = 143/388 (36%), Positives = 207/388 (53%), Gaps = 16/388 (4%)
Query: 180 PIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLP 239
P+ +F M +L ++ G KPTP+Q G+P LN RD++ A TGSGKT + +P
Sbjct: 155 PVLSFSEMNMVPVLLENVKRCGYTKPTPVQSLGIPTALNHRDLMACAQTGSGKTASYLIP 214
Query: 240 IIM-FCLEQEVKMPFI--RNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSC 296
I L + P+ + P LI+ P+REL+ Q + + F H +P +R
Sbjct: 215 AINEILLNISNRPPYSPGSHSSPQALILAPTRELSLQIYGEARKFTYH-----TP-VRCV 268
Query: 297 LAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFE 356
+ GG + + +G ++VATPGRLMDM + VR + R+L +DEADRM+DMGFE
Sbjct: 269 VVYGGADPRHQVHELSRGCKLLVATPGRLMDMFSRGYVRFSEIRFLILDEADRMLDMGFE 328
Query: 357 EDVRTIFSY------FAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVR 410
+R I AGQRQTLL+SAT P +IQ AR + R + VGR G+ + +
Sbjct: 329 PQIRMIVQGPDSDMPRAGQRQTLLYSATFPVEIQRLAREFMCRHSFLQVGRVGSTTENIT 388
Query: 411 QDLEPAQ-PEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQ 469
QD+ + P+ R L + L+F E+K+D D + +L + V+IHG + Q
Sbjct: 389 QDVRWIEDPDKRQALLTLLRENEGKLVLVFVEKKRDADYLERFLRNSELACVSIHGDRVQ 448
Query: 470 EERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXX 529
ER A+ F+ G VLVATDVAS+GLD N+ VI YDMP +I++YVHRI
Sbjct: 449 REREEALRLFKSGACQVLVATDVASRGLDIPNVGVVIQYDMPSNIDDYVHRIGRTGRAGK 508
Query: 530 XXXXXXXXXXPDHSVLRDLVHLLREAGQ 557
+ +++ DL+ LL E Q
Sbjct: 509 VGVAISFFNEKNRNIVDDLIPLLNETNQ 536
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 244 bits (597), Expect = 6e-63
Identities = 140/429 (32%), Positives = 223/429 (51%), Gaps = 14/429 (3%)
Query: 137 IQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRG 196
I+Y E K + + + ET R++L + + G D P PI+++ + +
Sbjct: 464 IKYAEFQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLL 523
Query: 197 LEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRN 256
L+ +KPT IQ Q +PA++NGRD+IGIA TGSGKTL F LP+ L Q P
Sbjct: 524 LKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAP---G 580
Query: 257 EGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVH 316
EG LI+ P+RELA Q H + F + L L R+ GG ++SE + +++G
Sbjct: 581 EGMIALIMSPTRELALQIHVECKKFSKVLGL------RTACVYGGASISEQIAELKRGAD 634
Query: 317 IMVATPGRLMDML---DKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTL 373
I+V TPGR++D+L ++++ L +L +DEADRM DMGF + I RQT+
Sbjct: 635 IVVCTPGRMIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQTI 694
Query: 374 LFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQ--K 431
+FSAT P K++N A+ L +P+ + G S + Q +E E R +L+ L
Sbjct: 695 MFSATFPPKVENVAKKILNKPLEIIAGGRSIVSSDIEQFVEVRPTETRFRRLIELLSIWY 754
Query: 432 TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATD 491
LIF R++ D ++ L + +++HG KDQ +R + F+ K +L+AT
Sbjct: 755 HKGQILIFTNRQETTDNLYRQLSNSQYQCLSLHGSKDQTDRDETISDFKNKVKTILIATP 814
Query: 492 VASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHL 551
+AS+GLD ++ V+N+D P+ +E+YVHR+ + ++
Sbjct: 815 LASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNRGTAYTFITPDEERFSSSIIKA 874
Query: 552 LREAGQRVP 560
L ++G +VP
Sbjct: 875 LEQSGSKVP 883
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 244 bits (596), Expect = 7e-63
Identities = 139/378 (36%), Positives = 206/378 (54%), Gaps = 11/378 (2%)
Query: 179 PPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTL 238
P TF IL+ + +G PTPIQ + +P VL+GRD++G A TG+GKT F+L
Sbjct: 8 PVDATFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSL 67
Query: 239 PIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLA 298
PII L Q LI+ P+RELA Q + + +H L RS +
Sbjct: 68 PIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPL------RSAVV 121
Query: 299 IGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEED 358
GGV ++ M +++GV I++ATPGRL+D + +K L + L +DEADRM+DMGF D
Sbjct: 122 FGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPD 181
Query: 359 VRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQ---DLEP 415
++ I + +RQTLLFSAT +I+ A + L P T+ V R+ AA+ TV Q D+
Sbjct: 182 LQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAE 241
Query: 416 AQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRA 475
+A V+L+ ++ ++F K + + G+ A AIHG + Q ER +A
Sbjct: 242 GDKQAAVVKLIR--DRSLKQVIVFCNSKIGASRLARQIERDGIIAAAIHGDRSQSERMQA 299
Query: 476 VEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXX 535
++AF+RGE + LVATDVA++GLD A + VIN+D+P + E+YVHRI
Sbjct: 300 LDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALS 359
Query: 536 XXXXPDHSVLRDLVHLLR 553
+ L D+ L++
Sbjct: 360 LCSPNERKQLADIEKLIK 377
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 243 bits (595), Expect = 1e-62
Identities = 140/400 (35%), Positives = 216/400 (54%), Gaps = 13/400 (3%)
Query: 166 NKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGI 225
N +++L D P P TF+ + P I + + +KPTPIQ +P L G D+IGI
Sbjct: 111 NAIKLLAS--DVPSPALTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGI 168
Query: 226 AFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHL 285
A TGSGKT F +P ++ QE P R +GP L++ P+RELA+Q ++ + F +L
Sbjct: 169 AKTGSGKTAAFLIPAMVHIGLQE---PMYRGDGPIVLVLSPTRELAQQIAEVAKGFCDNL 225
Query: 286 KLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMD 345
+ ++CL GG ++ ++VATPGRL+D ++ +N +L +D
Sbjct: 226 MIR-----QTCL-FGGAGRGPQANDLRHLPSLVVATPGRLIDFIEGGQCPMNRVNFLVLD 279
Query: 346 EADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG-A 404
EAD+M+DMGFE +R I + + RQT++FSAT PK+IQ A LV PV + +G
Sbjct: 280 EADQMLDMGFEPQIRKIIGHISKDRQTMMFSATWPKEIQQLAADFLVDPVHMIIGNKDLT 339
Query: 405 ASLTVRQDLEPAQPEARTVQLLHCLQK-TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAI 463
+ ++Q + + + + L L + +IF + K+ D + E L +KG +A ++
Sbjct: 340 TNSNIKQVITKCEEFEKLSKCLEVLNEHKDDKIIIFTKTKRTTDDLQENLNMKGFQAYSL 399
Query: 464 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXX 523
HG K Q +R + FR +K +LVATDVA++GLD +I VINYD P DIE YVHRI
Sbjct: 400 HGDKAQNQRDFVLGKFRSCKKGILVATDVAARGLDVNDIDIVINYDFPGDIETYVHRIGR 459
Query: 524 XXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFL 563
+ ++ R L ++ +A Q +P +L
Sbjct: 460 TARGNKEGLAVTFFTDENKNMSRKLAKIMTQAKQELPDWL 499
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 243 bits (594), Expect = 1e-62
Identities = 147/396 (37%), Positives = 213/396 (53%), Gaps = 18/396 (4%)
Query: 178 PPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFT 237
P P ++ FP+ I+ + +KP+PIQ P VL+G D+IGIA TGSGKTL F
Sbjct: 97 PDPFLSWTDTHFPQYIMNEVTHAKFEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLSFL 156
Query: 238 LPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCL 297
LP I+ Q + +GP L++ P+RELA Q + F + KL C
Sbjct: 157 LPSIVHINAQPTVK---KGDGPIVLVLAPTRELAMQIERESERFGKSSKL-------KCA 206
Query: 298 AI-GGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFE 356
I GG ++Q+GV +++ATPGRL+D L+ + L YL +DEADRM+DMGFE
Sbjct: 207 CIYGGADKYSQRALLQQGVDVVIATPGRLIDFLESETTTLRRVTYLVLDEADRMLDMGFE 266
Query: 357 EDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVR-PVTVNVGRAG-AASLTVRQDLE 414
+R I RQTL+FSAT PK +QN A+ PV V +G+ A + ++Q +
Sbjct: 267 IQIRKILGQIRPDRQTLMFSATWPKNVQNLAQDYCKNTPVYVQIGKHELAINERIKQIVY 326
Query: 415 PAQPEARTVQL---LHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEE 471
+ QL L CL + LIFA+ K+ +++ L +G + +AIHG K Q++
Sbjct: 327 VTDQSKKINQLIKQLDCLTQ-KDKVLIFAQTKKGCESMSRILNKEGFKCLAIHGDKAQKD 385
Query: 472 RSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXX 531
R + F+ GE +L+ATDVAS+GLD ++ HV NYD P+ +E+YVHRI
Sbjct: 386 RDYVMNKFKSGECRILIATDVASRGLDVKDVSHVFNYDFPKVMEDYVHRIGRTGRAGAYG 445
Query: 532 -XXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
D + R+ V +L +A Q +P LLD+
Sbjct: 446 CAVSFLTFEDDKKISREYVQMLHDAKQEIPIDLLDL 481
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 242 bits (592), Expect = 2e-62
Identities = 138/402 (34%), Positives = 219/402 (54%), Gaps = 16/402 (3%)
Query: 172 VEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSG 231
V G + P I TF+ P+ +L ++ ++PTP+Q +P + RD++ A TGSG
Sbjct: 303 VSGVNAPKSIPTFEVAGLPETVLANVKRANYERPTPVQKYSIPIINADRDLMACAQTGSG 362
Query: 232 KTLVFTLPIIMFCLEQEVKMP-FIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGS 290
KT F LP++ + ++ F + P +++ P+REL I Q F+ K +
Sbjct: 363 KTAAFLLPVLTKLITNGLQSSQFSEKQTPRAIVVGPTREL------IYQIFLEARKFSRG 416
Query: 291 PEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRM 350
+R +A GG +++ + +Q+G HI++ATPGRLMD +++ +V L+ ++ +DEADRM
Sbjct: 417 TVVRPVVAYGGTSMNHQIRDLQRGCHILIATPGRLMDFINRGLVGLDHVEFVILDEADRM 476
Query: 351 IDMGFEEDVRTIFSY----FAGQRQTLLFSATMPKKIQNFARSALVRP-VTVNVGRAGAA 405
+DMGFE ++R + S R TL+FSAT P +IQ A L + + VGR G A
Sbjct: 477 LDMGFETEIRKLASSPGMPSKSDRHTLMFSATFPDEIQRLAHDFLREDFLFLTVGRVGGA 536
Query: 406 SLTVRQDL---EPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVA 462
V Q + + A+ ++L+ + +T TL+F E K+ D + L +G +
Sbjct: 537 CTDVTQSIIQVDQDDKRAKLLELISDVAETRSRTLVFVETKRGADFLACMLSQEGCPTTS 596
Query: 463 IHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIX 522
IHG + Q+ER +A+ F+ +L+AT VA++GLD ++HVINYDMP++I+ YVHRI
Sbjct: 597 IHGDRLQQEREQALRDFKSAVCPILIATSVAARGLDIPKVEHVINYDMPKEIDEYVHRIG 656
Query: 523 XXXX-XXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFL 563
D + R LV +L EA Q VPG+L
Sbjct: 657 RTGRCGNLGRATTFYDNNKDGELARSLVKILSEAQQEVPGWL 698
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 241 bits (590), Expect = 4e-62
Identities = 147/383 (38%), Positives = 204/383 (53%), Gaps = 17/383 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F +F I G+ G PTPIQ Q +P L+GRD+IGIA TG+GKT F LPI
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPI-- 59
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
L++ ++ P R +I+ P+RELA+Q +I+ ++ TG +RS GGV
Sbjct: 60 --LQRLMRGPRGRVRA---MIVTPTRELAEQIQGVIEALGKY---TG---LRSVTLYGGV 108
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++ +++GV I V PGRL+D L++ + L L +DEAD+M DMGF DVR I
Sbjct: 109 GYQGQIQRLRRGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRI 168
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
QRQT+LFSATMP I+ AR AL P T+ +GR+ S TV + P +T
Sbjct: 169 LRLAPAQRQTMLFSATMPDAIRALAREALREPQTIQIGRSAPVS-TVTHAIYPVAEHLKT 227
Query: 423 VQLLHCLQKTPP-PTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L+ L+ T LIF K + + L G A A+ G Q R A++ FR
Sbjct: 228 ALLIELLRHTDTGSVLIFTRTKHRAQHLSDTLARMGYRATALQGNMSQNRRQAALDGFRS 287
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPD 541
G +LVATD+A++G+D A+I HVINYDMP+ E Y HRI D
Sbjct: 288 GRYQILVATDIAARGIDVAHISHVINYDMPQTAEAYTHRIGRTGRAARTGDAFTLVTRSD 347
Query: 542 HSVLRDLVHLLREAGQR--VPGF 562
++R + L+ E +R VPGF
Sbjct: 348 TGMVRAIERLIGEPLKRETVPGF 370
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 241 bits (589), Expect = 5e-62
Identities = 142/377 (37%), Positives = 200/377 (53%), Gaps = 11/377 (2%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPI 240
+ +FQ + I R L + PTPIQ Q +P L GRD++GIA TG+GKT F LPI
Sbjct: 15 LTSFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALPI 74
Query: 241 IMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIG 300
+ LE +K + + L++ P+REL+ Q D + RH++L+ S LAIG
Sbjct: 75 LHRLLEHRIKP---QPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLS------STLAIG 125
Query: 301 GVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVR 360
GV + + + +GV ++VATPGRL+D++ ++L +L +DEADRM+DMGF D+R
Sbjct: 126 GVPMGRQVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIR 185
Query: 361 TIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEA 420
I + +RQTL FSATMPK I A S L P V V + + + Q + A
Sbjct: 186 KIVAKLPIKRQTLFFSATMPKDIAELADSMLRDPARVAVTPVSSTAERINQRILQVDFSA 245
Query: 421 RTVQLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAF 479
+ L L+ P L+F K D V + L G+ A AIHG K Q R R + F
Sbjct: 246 KPAFLTKLLKDEPINRALVFTRTKHGADKVVKTLEKAGIAASAIHGNKSQNHRERTLAQF 305
Query: 480 RRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXX 539
R G+ LVATD+A++G+D I HVIN+D+P E YVHRI
Sbjct: 306 RSGDIRTLVATDIAARGIDVDGITHVINFDLPNVPETYVHRIGRTARAGAEGTAISLVAG 365
Query: 540 PDH-SVLRDLVHLLREA 555
+ S LRD+ L++ A
Sbjct: 366 GEELSYLRDIERLIKVA 382
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 241 bits (589), Expect = 5e-62
Identities = 141/395 (35%), Positives = 214/395 (54%), Gaps = 17/395 (4%)
Query: 178 PPPIRTFQHMKFPK--GILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLV 235
P P+ F H F + ++ L + PTPIQ Q P +L G D+IGIA TG+GKTL
Sbjct: 101 PNPVSEF-HQAFGEYPDLMEELRKQKFTTPTPIQAQAWPILLRGEDLIGIAQTGTGKTLA 159
Query: 236 FTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTH-DIIQHFIRHLKLTGSPEIR 294
F LP ++ Q + P GP L++ P+RELA Q ++ ++ R +K
Sbjct: 160 FLLPALIHIEGQPI--PRGERGGPNVLVLAPTRELALQIEKEVAKYQFRGIKAV------ 211
Query: 295 SCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMG 354
CL GG ++ + VV+ GV I++ATPGRL D++ + +V ++ YL +DEADRM+DMG
Sbjct: 212 -CLYGGGDRRAQ-INVVRNGVEILIATPGRLNDLVQEGVVDVSTITYLILDEADRMLDMG 269
Query: 355 FEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG-AASLTVRQDL 413
FE +R + RQT++ SAT P ++ A+S + P+ V +G AA+ TV Q +
Sbjct: 270 FEPQIRKVLLDVRPDRQTVMTSATWPDGVRRLAQSYMHDPIQVYIGTLDLAATHTVTQVI 329
Query: 414 EPAQPEARTVQLLHCLQKTPPP--TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEE 471
E E + ++ ++ P +IF +K D + +L + AIHG ++Q +
Sbjct: 330 EVMDEEDKFQRINEFVRDMQPTDKVIIFCGKKTRADDLSSEFILSNISCQAIHGNREQSD 389
Query: 472 RSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXX 531
R +A+E + G +L+ATDVAS+GLD +I HV+NYD P +IE YVHR+
Sbjct: 390 REQALEDIKNGTVKILIATDVASRGLDIEDITHVVNYDFPRNIEEYVHRVGRTGRAGRTG 449
Query: 532 XXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
D V +L+ +L+EA Q VP + DM
Sbjct: 450 ISLSFMTRSDWGVAGELIKILKEADQEVPDEVRDM 484
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 240 bits (588), Expect = 7e-62
Identities = 137/380 (36%), Positives = 195/380 (51%), Gaps = 11/380 (2%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F+ + +++ L+ G KPTPIQ Q +P +L G+D+ GIA TG+GKT F LP I
Sbjct: 7 SFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPSIH 66
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
+ P G LI+ P+RELA Q + RHL+++ + GGV
Sbjct: 67 YLATNPQARP---QRGCRMLILSPTRELASQIARACNDYTRHLRMSVNA------VFGGV 117
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
+ M ++ +G I+VATPGRL+D++D++ + L +DEAD+M+D+GF +R I
Sbjct: 118 PIGRQMRMLDRGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRI 177
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
RQTL FSATMPK IQ + L PVTV+V + + V Q +
Sbjct: 178 DKLLPKNRQTLFFSATMPKTIQELSSQFLSDPVTVSVAPQSSTAERVEQFGIFVNQSEKQ 237
Query: 423 VQLLHCLQKTP--PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
L L+ TP L+F K D V +L G+ A AIHG K Q +R RA+ AFR
Sbjct: 238 ALLTITLKNTPGLDRALVFTRTKHGADRVVRHLEAAGLPAAAIHGNKSQPQRERALNAFR 297
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXP 540
G +LVATD+A++G+D + HV NY++P E YVHRI
Sbjct: 298 NGRLKILVATDIAARGIDVPGVSHVFNYELPNVAEQYVHRIGRTARAGRDGQAISFIAND 357
Query: 541 DHSVLRDLVHLLREAGQRVP 560
+ S LR + L R Q +P
Sbjct: 358 ERSYLRSIERLTRVKLQILP 377
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 240 bits (588), Expect = 7e-62
Identities = 145/392 (36%), Positives = 219/392 (55%), Gaps = 17/392 (4%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPI 240
++TF P+ +L K +KP+PIQ P +L+GRD+IGIA TGSGKTL F +P
Sbjct: 115 LKTFAESNLPENVLDC--CKTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPA 172
Query: 241 IMFCLEQEVKMPF-IRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSP-EIRSCLA 298
IM L++ K+ + P L++ P+RELA Q D+++ G P ++S
Sbjct: 173 IMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLRE-------AGEPCGLKSICV 225
Query: 299 IGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEED 358
GG + + ++ GV I++ TPGRL D+++ ++RL+ ++ +DEADRM+DMGFEE
Sbjct: 226 YGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEP 285
Query: 359 VRTIFSYFAGQRQTLLFSATMPKKIQNFARSAL-VRPVTVNVGRAG-AASLTVRQDLEPA 416
VR I S RQ ++FSAT P + A+ + P+ V +G AA+ V Q +E
Sbjct: 286 VRFILSNTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVL 345
Query: 417 QPEARTVQLLHCLQKTPPP----TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEER 472
AR +L+ L+K L+FA K + + + +L +G +AV+IHG K Q ER
Sbjct: 346 DERARDQRLIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSER 405
Query: 473 SRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXX 532
+R++ F+ G +LVATDVA++GLD +++ VINY P E+YVHRI
Sbjct: 406 TRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGV 465
Query: 533 XXXXXXXPDHSVLRDLVHLLREAGQRVPGFLL 564
+ + +LV++LREAGQ VP LL
Sbjct: 466 AHTFFTPLNKGLAGELVNVLREAGQVVPADLL 497
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 240 bits (587), Expect = 9e-62
Identities = 134/330 (40%), Positives = 193/330 (58%), Gaps = 10/330 (3%)
Query: 193 ILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMP 252
+L+G+EA G+ +P PIQ Q +P+ L G+D++GIA TGSGKT F+LPI+ + K
Sbjct: 98 LLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQKIIGLGDKR- 156
Query: 253 FIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQ 312
R + LI+ P+RELA Q I+ IR++ + S I + L +GGV+ ++ +
Sbjct: 157 --RPKTARALILAPTRELAVQ----IEQTIRNV--SKSAHISTALVLGGVSKLSQIKRIA 208
Query: 313 KGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQT 372
G+ +++ATPGRL D++ +V L+ R+L +DEADRM+DMGF DV+ I +RQT
Sbjct: 209 PGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKRIAKATHAERQT 268
Query: 373 LLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPA-QPEARTVQLLHCLQK 431
LFSATMPK+I + A L PV V V GA + + Q + P E R +
Sbjct: 269 ALFSATMPKEIASLAERLLRDPVRVEVAPQGATASEITQVVHPVPTKEKRRLLSAMLTDA 328
Query: 432 TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATD 491
++F K DAV +L + AIHG K Q R RA+ FR G +LVATD
Sbjct: 329 DMRSVIVFTRTKHGADAVVRHLERDRYDVAAIHGNKSQNARQRALNGFRDGTLRILVATD 388
Query: 492 VASKGLDFANIQHVINYDMPEDIENYVHRI 521
+A++G+D I HV+NYD+P++ E YVHRI
Sbjct: 389 IAARGIDVPGISHVVNYDLPDEPETYVHRI 418
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 240 bits (587), Expect = 9e-62
Identities = 141/390 (36%), Positives = 214/390 (54%), Gaps = 14/390 (3%)
Query: 193 ILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMP 252
++ GL A+ I PTPIQ + +P LNGRD++GIA TG+GKT F LP++ ++ K P
Sbjct: 82 LVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDALMKAGTK-P 140
Query: 253 FIRNEGPYGLIICPSRELAKQTHDIIQHFIR--HLKLTGSPEIRSCLAIGGVAVSECMEV 310
R GLI+ P+REL Q + ++ F HLKL + +GGVA+ ++
Sbjct: 141 APRT--CRGLILAPTRELVSQICESLRAFTEGSHLKLQ--------VIVGGVAIGPQIKR 190
Query: 311 VQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQR 370
++G ++VATPGRL+D+LD+K +RL+ R+L +DEAD+M+D+GF +R I +R
Sbjct: 191 AERGADLIVATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFIHALRKIAPLLPAER 250
Query: 371 QTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCL- 429
QT+LFSATMPK+++ +R+ L P V V G + + Q + + A+T L+ L
Sbjct: 251 QTMLFSATMPKQMEELSRAYLTDPARVEVAPPGKIADKITQSVHFVEQGAKTQLLIDLLG 310
Query: 430 QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVA 489
L+F+ K D + L G E AIHG + Q +R RA++AFR G VLVA
Sbjct: 311 NHRDELALVFSRTKHGADRLARKLSNAGFETAAIHGNRSQGQRERALKAFREGTLKVLVA 370
Query: 490 TDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLV 549
TDVA++G+D +++ V N+D+P EN+VHRI + LR +
Sbjct: 371 TDVAARGIDIPDVRFVYNFDLPNVPENFVHRIGRTARAGRDGQAVAFCAPEEMGELRAVQ 430
Query: 550 HLLREAGQRVPGFLLDMLGEPDVPAPAGQG 579
++ G +++ EP P G G
Sbjct: 431 KVMGLTLPVAGGTPWEVMDEPSKPRRGGGG 460
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 240 bits (587), Expect = 9e-62
Identities = 151/436 (34%), Positives = 225/436 (51%), Gaps = 28/436 (6%)
Query: 137 IQYEEPIKTSWRPPRCILELPETRHEMIRNKLR-ILVEGDDPPPPIRTFQHMKFPKGILR 195
IQY K + P IL+LPE +R KL I V G + PI + + P I+
Sbjct: 270 IQYHPFRKDFYTEPTEILKLPEEEVANLRLKLDGIRVRGVNCTRPIIRWSQLGLPSTIMS 329
Query: 196 GLEAK-GIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFI 254
+E + P+ IQ Q +PA+++GRD+IG+A TGSGKTL F LP++ +Q P
Sbjct: 330 IIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPLLRHIQDQP---PLR 386
Query: 255 RNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKG 314
R +GP GLI+ P+RELA Q H + HF + L ++ SC GG ++ + ++KG
Sbjct: 387 RGDGPIGLIMTPTRELALQIHKELNHFTKKLNIS------SCCCFGGSSIESQIAELKKG 440
Query: 315 VHIMVATPGRLMDML---DKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQ 371
I+V TPGR++D+L ++ L YL +DEADRM DMGFE V +F+ RQ
Sbjct: 441 AQIIVGTPGRIIDLLAANSGRVTNLQRVTYLVLDEADRMFDMGFEPQVTKVFTRVRPDRQ 500
Query: 372 TLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLE-------PAQPEARTVQ 424
T+LFSAT P+K++ A+ L P+ + VG + + Q +E + EA+ +
Sbjct: 501 TVLFSATFPRKMELLAKKILDNPMEIVVGGISVVASEITQKVELFENEDDKSLEEAKFSK 560
Query: 425 LLHCL-----QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAF 479
LL L + LIF E++ D + LL + +AIHGGKDQ +R A+ F
Sbjct: 561 LLSTLNDYGDKDAECKILIFVEKQIAADELLVKLLTEKYPCLAIHGGKDQIDRKHAIREF 620
Query: 480 RRGEK--DVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXX 537
++L+AT +A++GLD + VINY+ +E+YVHR+
Sbjct: 621 SSSNSGVNILIATSIAARGLDVKGLNLVINYEAASHMEDYVHRVGRTGRAGRKGTAITFV 680
Query: 538 XXPDHSVLRDLVHLLR 553
+ DLV +R
Sbjct: 681 SSKQGRAITDLVKAMR 696
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 239 bits (584), Expect = 2e-61
Identities = 136/380 (35%), Positives = 202/380 (53%), Gaps = 13/380 (3%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + K +L+ L KG PTPIQ Q +P V++GRD++GIA TG+GKT F LPI+
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
E + P G L++ P+RELA Q + + + +H+ LT + GGV
Sbjct: 127 LAEDKKPAP---RRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVAT------IFGGVK 177
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
M+ + GV ++VATPGRLMD L +K LN +DEAD+M+D+GF +R I
Sbjct: 178 YGPQMKALAAGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIA 237
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
S +RQ L FSATMP +I A L P V + + + Q L + + +
Sbjct: 238 SQLPKERQNLFFSATMPSEIGKLAGELLKNPAQVAITPSATTVERIDQSLIFIEAQRKRP 297
Query: 424 QLLHCL-QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG 482
L L K+ +++F K+ D V +YL+ G+EA AIHG K Q +R RA+ AF+ G
Sbjct: 298 LLAELLADKSVERSIVFTRTKRGADRVAKYLVASGIEAAAIHGDKTQGQRERALAAFKAG 357
Query: 483 EKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDH 542
+ L+ATD+A++G+D ++ HV NY++P E+YVHRI +
Sbjct: 358 QVKALIATDIAARGIDVNDVSHVFNYELPNVPESYVHRIGRTARKGKEGIAISFCADDER 417
Query: 543 SVLRDLVHLLREAGQRVPGF 562
++L+D+ R Q +P F
Sbjct: 418 NLLKDIQKATR---QTIPTF 434
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 239 bits (584), Expect = 2e-61
Identities = 143/403 (35%), Positives = 214/403 (53%), Gaps = 16/403 (3%)
Query: 170 ILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTG 229
I V G P PI +F P IL+ LE + ++P PIQ+Q +PA++ GRD+IGIA TG
Sbjct: 356 IRVYGKKCPRPISSFSQCGLPDPILKILEKREYERPFPIQMQCIPALMCGRDVIGIAETG 415
Query: 230 SGKTLVFTLPIIMFCLEQEVKMPFIR-NEGPYGLIICPSRELAKQTHDIIQHFIRHLKLT 288
SGKTL F LP I L+Q P +R N+G L+I P+REL Q + F R + L
Sbjct: 416 SGKTLAFLLPAIRHALDQ----PSLRENDGMIVLVIAPTRELVIQISNESSKFSRAVGL- 470
Query: 289 GSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDK---KMVRLNVCRYLCMD 345
++ GG + E + +++G I++ TPGRL+D+L K+ L +L +D
Sbjct: 471 -----KTLAIYGGAGIGEQLNALKRGAEIVIGTPGRLIDVLTLSKGKVTNLRRVTFLVLD 525
Query: 346 EADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAA 405
EADRM DMGF + I RQT LFSAT P I+N A+ L +P+ + VG+ G +
Sbjct: 526 EADRMFDMGFAPQISAIVGNIRPDRQTALFSATFPIMIENLAKKILAKPLQIVVGQRGKS 585
Query: 406 SLTVRQDLEPAQPEARTVQLLHCLQKTPPP--TLIFAERKQDVDAVHEYLLLKGVEAVAI 463
+ V Q + E + ++LL L + +IF + + + + LL G +A +
Sbjct: 586 ASQVDQHVLVLNEEKKLLKLLKLLGEWHEHGNIIIFVNTQLESEHLFNDLLAYGYDAGIL 645
Query: 464 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXX 523
HGG DQ +R + FR G+K +L+AT +A++G+D ++ VINY P+ E+YVHR+
Sbjct: 646 HGGVDQTDREFTLNDFREGKKTILIATSIAARGIDVKSVVLVINYAAPDHFEDYVHRVGR 705
Query: 524 XXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
+ S D++ L+ A Q VP LL +
Sbjct: 706 TGRAGTIGTSYTFLTPEEASKSHDIIKALKLASQEVPKELLQL 748
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 238 bits (583), Expect = 3e-61
Identities = 134/375 (35%), Positives = 209/375 (55%), Gaps = 8/375 (2%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TF I + ++A+G +PTPIQ + +P V+ G D++G A TG+GKT F+LPI+
Sbjct: 21 TFADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILN 80
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
+ + LI+ P+RELA Q + + + K T +RS + GGV
Sbjct: 81 RLMPLATENTSPARHPVRALILTPTRELADQ---VAANVHTYAKFT---PLRSTVVYGGV 134
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++ ++ +++GV +++ATPGRL+D + +K + L + L +DEADRM+DMGF D++ I
Sbjct: 135 DINPQIQTLRRGVELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLDMGFLPDLQRI 194
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEA-R 421
+ RQ LLFSAT +IQ A+S +V P + V R A S ++Q + E +
Sbjct: 195 INLLPKTRQNLLFSATFSPEIQKLAKSFMVSPTLIEVARRNATSENIKQVIFALDSEEDK 254
Query: 422 TVQLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
+ + H +Q K ++F+ K + +L +GV + AIHG K Q ER++++EAF+
Sbjct: 255 RMAVCHLIQSKALSQVIVFSNTKLGTARLARHLEKEGVSSTAIHGDKTQIERTKSLEAFK 314
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXP 540
GE VLVATDVA++GLD A++ VINYD+P E+YVHRI
Sbjct: 315 AGEVTVLVATDVAARGLDIADLPCVINYDLPTTPEDYVHRIGRTGRAGAKGTAYSFVVKR 374
Query: 541 DHSVLRDLVHLLREA 555
D L+D+ L+ +A
Sbjct: 375 DERALKDIEKLIGKA 389
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 238 bits (583), Expect = 3e-61
Identities = 141/357 (39%), Positives = 199/357 (55%), Gaps = 15/357 (4%)
Query: 170 ILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTG 229
I + GD P P+ F + P I + G QKPTPIQ P +LN RD++G+A TG
Sbjct: 133 ITIYGDRVPQPMLEFSDLVAPDAIHQAFMDAGFQKPTPIQSVSWPVLLNSRDIVGVAKTG 192
Query: 230 SGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTG 289
SGKT+ F +P + + Q P +GP L++ P+RELA Q I+ R LT
Sbjct: 193 SGKTMAFMIPAALHIMAQPPLQP---GDGPIALVLAPTRELAVQ----IETETRKA-LTR 244
Query: 290 SPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADR 349
P I + GG ++ GVH+ +ATPGRL+D+L+ L YL +DEADR
Sbjct: 245 VPSIMTTCVYGGTPKGPQQRALRAGVHVCIATPGRLIDLLETNCTNLLRVTYLTLDEADR 304
Query: 350 MIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG-AASLT 408
M+DMGFE+ +R I S RQTL+FSAT P++I+N A S V V++G A+
Sbjct: 305 MLDMGFEDQIRKICSQIRTDRQTLMFSATWPREIRNLAASFQKDFVRVHIGSEELVANAD 364
Query: 409 VRQD---LEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAV-AIH 464
V Q +E E + ++L Q P L+F + K+ D + + L + V AIH
Sbjct: 365 VHQHVFVVEGYHKEEKMEEILR--QVGPQRVLVFVKTKKSCDILQDRLGRALRQTVLAIH 422
Query: 465 GGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
G K Q R ++ FR+ E+ +LVATDVA++GLD ++ V+NYDMP +IE+YVHRI
Sbjct: 423 GDKLQSSRDYVLDRFRKDERAILVATDVAARGLDIKDLDVVVNYDMPLNIEDYVHRI 479
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 238 bits (582), Expect = 4e-61
Identities = 138/408 (33%), Positives = 218/408 (53%), Gaps = 12/408 (2%)
Query: 175 DDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTL 234
+ P F + I++ L G PTPIQ Q +PAVLN +D++G+A TG+GKT
Sbjct: 96 EQPKSDASAFSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTA 155
Query: 235 VFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIR 294
F LP+I L + I+ +I+ P+RELA Q H+ F + L L +
Sbjct: 156 AFALPLIQQLLMNPIA---IKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTH--- 209
Query: 295 SCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMG 354
AIGG + + M + KGV I+VATPGRL D++D+K +RL+ ++L +DEAD+M+D+G
Sbjct: 210 ---AIGGAPIRKQMRDLSKGVDILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIG 266
Query: 355 FEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLE 414
F V+ I S RQTLLFSATM K+I+ + L PV V+V + + Q L
Sbjct: 267 FLPAVKRIISKVNKDRQTLLFSATMSKEIKKLTETYLTDPVQVSVTPENSTVDKIEQSLM 326
Query: 415 PAQPEARTVQLLHCLQKTPPP-TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERS 473
+ + + L + P ++F+ K D + ++L + + A AIHG K Q +R
Sbjct: 327 HLSKQNKGLALQRIISANPKKRVIVFSRTKHGSDKLVKWLGTQNIGADAIHGNKSQGQRQ 386
Query: 474 RAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXX 533
RA++ F++G+ +L+ATD+A++G+D I+ VIN+D+P E+YVHRI
Sbjct: 387 RALDDFKKGKTYILIATDIAARGIDIPGIEIVINFDLPNVPESYVHRIGRTARAGADGKA 446
Query: 534 XXXXXXPDHSVLRDLVHLLRE--AGQRVPGFLLDMLGEPDVPAPAGQG 579
+H L D+ +++ + G +++ + PAP +G
Sbjct: 447 IAFCAPDEHKQLWDIEKVIKMDIPVVEMEGLTQNLIPNFEKPAPRRRG 494
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 237 bits (580), Expect = 6e-61
Identities = 136/352 (38%), Positives = 188/352 (53%), Gaps = 21/352 (5%)
Query: 180 PIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLP 239
P+ TF + + + + G + PTPIQ +P L GRD++GIA TG+GKT FTLP
Sbjct: 9 PMTTFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLP 68
Query: 240 IIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAI 299
+I R P L++CP+RELA Q + + +H+KLT L I
Sbjct: 69 MITMLARGRA-----RARMPRSLVLCPTRELAAQVAENFDIYAKHVKLT------KALLI 117
Query: 300 GGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDV 359
GGV+ E + + KGV +++ATPGRL+D ++ + LN + + +DEADRM+DMGF D+
Sbjct: 118 GGVSFKEQEQAIDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDI 177
Query: 360 RTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDL------ 413
IF RQTL FSATM +I+ + L P + V R S T+ Q L
Sbjct: 178 ERIFGLVPFTRQTLFFSATMAPEIERITNTFLSNPEKIEVERQSTTSATIEQRLIEFKAP 237
Query: 414 -EPAQPEARTVQLLHCLQKTPPP---TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQ 469
AQ + + L + +IF RK DVD V + L + A IHG DQ
Sbjct: 238 RRDAQAKMKRDMLRAAITAEGDAFRNAIIFCNRKVDVDIVAKSLKKHNLNAEPIHGDLDQ 297
Query: 470 EERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
R R + FR G +LVA+DVA++GLD N+ HVINYD+P E+YVHRI
Sbjct: 298 SHRMRTLAGFRDGSITLLVASDVAARGLDIPNVSHVINYDVPSHAEDYVHRI 349
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 237 bits (579), Expect = 8e-61
Identities = 130/340 (38%), Positives = 199/340 (58%), Gaps = 14/340 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + + I+R +E G + PTPIQ Q +P VL G D++G+A TG+GKT FTLP++
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPML-- 350
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
Q++ R P LI+ P+RELA Q + + + ++L+LT + L IGG +
Sbjct: 351 ---QKLAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHA------LLIGGES 401
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
++E +V+ +GV +++ATPGRL+D+ + + L L +DEADRM+DMGF D+ I
Sbjct: 402 MAEQRDVLNRGVDVLIATPGRLLDLFGRGGLLLTQTSTLVIDEADRMLDMGFIPDIEKIV 461
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDL--EPAQPEAR 421
+ RQTL FSATM +I+ A + L PV + V R + + T+ + L P + R
Sbjct: 462 ALLPAHRQTLFFSATMAPEIRRLADAFLRHPVEITVSRQSSVATTIEEALVIVPEDEKRR 521
Query: 422 TVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
T++ L ++ ++F RK+DVD + +YL +EA +HG Q R +E FR
Sbjct: 522 TLKKL-LRRENVQSAIVFCNRKRDVDMIQQYLTKHDIEAGHLHGDLAQSLRFSTLERFRS 580
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
GE LV +DVA++G+D + HV NYD+P + E+YVHRI
Sbjct: 581 GELKFLVCSDVAARGIDIGGLSHVFNYDLPFNAEDYVHRI 620
>UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX4;
n=49; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX4 - Homo sapiens (Human)
Length = 724
Score = 237 bits (579), Expect = 8e-61
Identities = 140/414 (33%), Positives = 220/414 (53%), Gaps = 14/414 (3%)
Query: 172 VEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSG 231
V G D PP I TF+ + + + G K TP+Q +P +L GRD++ A TGSG
Sbjct: 278 VSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSG 337
Query: 232 KTLVFTLPIIMFCLEQEVKMP-FIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGS 290
KT F LPI+ + + F + P +I+ P+REL Q ++ K +
Sbjct: 338 KTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQI------YLEARKFSFG 391
Query: 291 PEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRM 350
+R+ + GG + + + +G +I+ ATPGRLMD++ K+ + L +YL +DEADRM
Sbjct: 392 TCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRM 451
Query: 351 IDMGFEEDVRTIFSY----FAGQRQTLLFSATMPKKIQNFARSALVRP-VTVNVGRAGAA 405
+DMGF +++ + S QRQTL+FSAT P++IQ A L + V VG+ G A
Sbjct: 452 LDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGA 511
Query: 406 SLTVRQDLEPAQPEARTVQLLHCLQKTPPP-TLIFAERKQDVDAVHEYLLLKGVEAVAIH 464
V+Q + ++ +L+ L+ T++F E K+ D + +L + + +IH
Sbjct: 512 CRDVQQTVLQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIH 571
Query: 465 GGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXX 524
G ++Q ER +A+ FR G+ VLVAT VA++GLD N+QHVIN+D+P I+ YVHRI
Sbjct: 572 GDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRT 631
Query: 525 XX-XXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGEPDVPAPAG 577
D+ + + LV +L +A Q VP +L ++ +P +G
Sbjct: 632 GRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLEEIAFSTYIPGFSG 685
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 236 bits (578), Expect = 1e-60
Identities = 141/432 (32%), Positives = 229/432 (53%), Gaps = 18/432 (4%)
Query: 137 IQYEEPIKTSWRPPRCILELPETRHEMIRNKLR-ILVEGDDPPPPIRTFQHMKFPKGILR 195
I Y+ K +R ++++ + +R +L I V G D P PI+ + +L
Sbjct: 457 IDYQPFRKDFYREVSELVQMTPEEAKKLRQQLGDIKVRGKDVPKPIQNWYQCGLNDRVLN 516
Query: 196 GL-EAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFI 254
L E K P PIQ Q +P +++GRD IGIA TGSGKTL + LP++ L+Q P +
Sbjct: 517 VLIEKKKFINPFPIQAQAVPCIMSGRDFIGIAETGSGKTLAYLLPLLRHVLDQ----PAL 572
Query: 255 RN-EGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQK 313
++ +GP +I+ P+RELA Q + + F L L + C +GG ++ + +++
Sbjct: 573 KDGDGPIAIIMAPTRELAHQIYVNCRWFTSILNLN----VVCC--VGGAGIAGQLSDLKR 626
Query: 314 GVHIMVATPGRLMDML---DKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQR 370
G I+V TPGR++D+L + K+ L Y+ +DEADRM D+GFE + I R
Sbjct: 627 GTEIVVCTPGRMIDVLTTSNGKITNLRRVTYVVIDEADRMFDLGFEPQICKIIQNIRPDR 686
Query: 371 QTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQ 430
Q ++FSAT PK ++ A+ L +P+ VG G A + Q +E + +LL Q
Sbjct: 687 QLVMFSATFPKNVEQLAKRVLRKPIECIVGGRGQAGGNIEQIIEFMDESDKLYKLLLLFQ 746
Query: 431 K--TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLV 488
+ T LIF E++ + D + + LL G ++ +HGG D ++R + F++G + ++V
Sbjct: 747 EWYTKGSILIFVEKQTEADDLFKELLKYGYKSFVLHGGMDPQDREFTIHDFKKGIRTIMV 806
Query: 489 ATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDL 548
AT V ++GLD +I VIN+ P +E+Y+HRI D + DL
Sbjct: 807 ATSVLARGLDIKHICLVINFSCPNHMEDYIHRIGRTGRAGQKGTAITFFTPQDEHLANDL 866
Query: 549 VHLLREAGQRVP 560
V+LL ++ Q++P
Sbjct: 867 VYLLEKSEQQLP 878
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 236 bits (578), Expect = 1e-60
Identities = 139/398 (34%), Positives = 207/398 (52%), Gaps = 17/398 (4%)
Query: 177 PPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVF 236
P I F + + + +PTPIQ +P VL+G+D++G A TGSGKT F
Sbjct: 265 PKNGILNFDQADLSETVRSNVRKAKYDRPTPIQKWAIPIVLSGKDLMGCAQTGSGKTAAF 324
Query: 237 TLPIIMFCLEQEV---KMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEI 293
LP++ ++ ++ F + P +I+ P+REL Q ++ K S +
Sbjct: 325 LLPVLTGIIKNDLIEGGSGFGGPQYPAAIIVGPTRELVNQI------YLEARKFASSTCV 378
Query: 294 RSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDM 353
R + GG +V ++KG H++V TPGRL+D + K + L+ +YL +DEADRM+DM
Sbjct: 379 RPVVVYGGTSVGYQARELEKGAHVVVGTPGRLLDFIGKGKINLSKVKYLILDEADRMLDM 438
Query: 354 GFEEDVRTIFSYF----AGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTV 409
GFE ++R + + F GQRQTL+FSAT +IQ A+ L V V VGR G A+ +
Sbjct: 439 GFEPEIRKLVTTFDMPEKGQRQTLMFSATFAAEIQQLAKEFLSEYVFVTVGRVGGANSDI 498
Query: 410 RQDLEPAQPEARTVQLLHCL-QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKD 468
Q++ + +L+ L Q TL+F E K+ D + YL + A +IHG +
Sbjct: 499 TQEVHQVTKYEKREKLVEILNQAGTDRTLVFLETKRSADFLAAYLSQEQYPATSIHGDRL 558
Query: 469 QEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXX---X 525
Q ER A+ F+ G +L+AT VA++GLD ++HVINYD+P I+ YVHRI
Sbjct: 559 QREREEALLDFKTGRAPILIATSVAARGLDIPGVKHVINYDLPSGIDEYVHRIGRTGRCG 618
Query: 526 XXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFL 563
D + R LV L +A Q VP +L
Sbjct: 619 NLGKATSFFDPDVNQDKELARSLVKTLGDAQQVVPPWL 656
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 236 bits (577), Expect = 1e-60
Identities = 129/326 (39%), Positives = 189/326 (57%), Gaps = 10/326 (3%)
Query: 197 LEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRN 256
L+ G + PTPIQ+ +P +L G D++GIA TG+GKT F+LPI+ + K I
Sbjct: 19 LKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRK---IEP 75
Query: 257 EGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVH 316
+ P LI+ P+RELA Q H+ I+ + +HL + + + GGV + + +Q GV
Sbjct: 76 KSPRCLILTPTRELAIQIHENIEAYSKHLNM------KHAVIFGGVGQNPQVRALQGGVD 129
Query: 317 IMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFS 376
I++ATPGRLMD+ +K ++L+ +DEADRM+DMGF +D++ I +R L FS
Sbjct: 130 ILIATPGRLMDLHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLPQKRHNLFFS 189
Query: 377 ATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQ-KTPPP 435
ATMP +IQ A LV P V V + + V Q + + LLH L+ ++
Sbjct: 190 ATMPHEIQTLANRILVNPKKVEVTPVSSTAEKVEQRVMFVDKPQKLDLLLHILKDESLSK 249
Query: 436 TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASK 495
L+F + K + V + L GV A IHG K Q +R RA+E F+ G+ VLVATD+A++
Sbjct: 250 VLVFVQMKYGANRVVDRLTKAGVAAAGIHGDKSQNQRQRALEEFKNGDVRVLVATDIAAR 309
Query: 496 GLDFANIQHVINYDMPEDIENYVHRI 521
G+D I HVIN ++P E+YVHRI
Sbjct: 310 GIDIDGITHVINLELPHIPESYVHRI 335
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 235 bits (576), Expect = 2e-60
Identities = 138/395 (34%), Positives = 212/395 (53%), Gaps = 20/395 (5%)
Query: 174 GD-DPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGK 232
GD DP + F + +LR L A G ++PTPIQ + +P ++ GRD++G A TG+GK
Sbjct: 48 GDIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGK 107
Query: 233 TLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPE 292
T F LP++ + + GP L++ P+RELA Q + I + R L P
Sbjct: 108 TAAFALPLLHRLTDDRTG-----DHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLP- 161
Query: 293 IRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMID 352
GG + + + +GV ++VATPGR +D + + +RL+ + +DEAD M+D
Sbjct: 162 -----VYGGAPIGRQVRALVQGVDVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLD 216
Query: 353 MGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRA----GAASLT 408
MGF ED+ I +RQT+LFSAT+P ++ AR L PV + +GRA GAA L
Sbjct: 217 MGFAEDIDAILEQAPQKRQTVLFSATLPPRMDQIARRHLRDPVRIQIGRAAPEPGAAPL- 275
Query: 409 VRQDLEPAQPEARTVQLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGK 467
VRQ +T L L ++P ++F +++VD + + L +G A ++HGG
Sbjct: 276 VRQVSYVVPRAYKTAALGRILDVESPRSAIVFCRTREEVDQLADSLNGRGYRAESLHGGM 335
Query: 468 DQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXX 527
QE+R R +E R D+LVATDVA++GLDF + HV+NY +P ++YVHRI
Sbjct: 336 SQEQRERVMERLRTATADLLVATDVAARGLDFEQLTHVVNYSVPSAPDSYVHRIGRVGRA 395
Query: 528 XXXXXXXXXXXXPDHSVLRDLVHLLRE--AGQRVP 560
+H +L+ + + R+ A ++VP
Sbjct: 396 GREGVAITLAEPREHRMLKTIERVTRQRIAVEKVP 430
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 235 bits (576), Expect = 2e-60
Identities = 137/394 (34%), Positives = 206/394 (52%), Gaps = 14/394 (3%)
Query: 178 PPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFT 237
P IR F + IL +E KPTP+Q +P + RD++ A TGSGKT F
Sbjct: 349 PSAIREFAEANIDRTILENVEKAHYIKPTPVQKYAIPIITGNRDLMSCAQTGSGKTAAFL 408
Query: 238 LPIIMFCLE--QEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRS 295
+P++ ++ E+ + P L+I P+RELA Q IQ R K + I+
Sbjct: 409 IPVLNTLMQFRSELTSSLSEVQAPLALVIAPTRELAVQ----IQKEAR--KFAQNTSIKP 462
Query: 296 CLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGF 355
+ GGV V+ + VQ+ H++V TPGRL D L K+ + L +YL +DEADRM+DMGF
Sbjct: 463 VVIYGGVQVAYHLRQVQQDCHLLVGTPGRLKDFLGKRKISLANLKYLILDEADRMLDMGF 522
Query: 356 EEDVRTIFSYF----AGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQ 411
+++ I + F R TL+FSAT P +IQN A L V + +G+ G + Q
Sbjct: 523 LPEIKAIINDFDMPPKEDRHTLMFSATFPTEIQNLAAEFLNNYVYLTIGKVGGTHSDITQ 582
Query: 412 DLEPAQPEARTVQLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQE 470
+ + A+ +L+ L + L+F + K+ D + YL G +IHG + Q+
Sbjct: 583 CIMEVEESAKRDKLIEILDTEGTNRNLVFVQTKRLADFLASYLCQNGFHTTSIHGDRLQQ 642
Query: 471 ERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI-XXXXXXXX 529
+R A+ F+ G + VL+AT VA++GLD A+++ VINYD+P++IE Y+HRI
Sbjct: 643 QREEALAEFKAGTQHVLIATAVAARGLDIADVKQVINYDLPDEIEEYIHRIGRTGRIGNK 702
Query: 530 XXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFL 563
D + R LV L +A Q VP +L
Sbjct: 703 GKAISFFTRGKDEGLARALVKTLADAEQEVPSWL 736
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 235 bits (576), Expect = 2e-60
Identities = 146/412 (35%), Positives = 212/412 (51%), Gaps = 20/412 (4%)
Query: 172 VEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSG 231
V GD P I F F ++ + G KPTP+Q +P +L RD++ A TGSG
Sbjct: 129 VSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSG 188
Query: 232 KTLVFTLPIIMFCLE---QEVKMPFIRNEG----PYGLIICPSRELAKQTHDIIQHFIRH 284
KT F LPII L VK P N P L++ P+RELA Q H
Sbjct: 189 KTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHK------EA 242
Query: 285 LKLTGSPEIRSCLAIGGVA-VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLC 343
K + I++ + GG + + ++ G HI++ATPGRL+D++++ + L CRYL
Sbjct: 243 TKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLV 302
Query: 344 MDEADRMIDMGFEEDVRTIFSYFAGQ---RQTLLFSATMPKKIQNFARSALV-RPVTVNV 399
+DEADRM+DMGFE +R I R T +FSAT PK+IQ A+ L + + V
Sbjct: 303 LDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAV 362
Query: 400 GRAGAASLTVRQDLEPAQPEARTVQLLHCL--QKTPPPTLIFAERKQDVDAVHEYLLLKG 457
GR G+ S + Q L + L+ L + + L+F E K+ + + +L +
Sbjct: 363 GRVGSTSENIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQ 422
Query: 458 VEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENY 517
+ +V+IHG Q ER R +E FR G+ +LVAT VA++GLD N++HVINYD+P D + Y
Sbjct: 423 IRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEY 482
Query: 518 VHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGE 569
VHRI + + RDL +L+ E+ Q VP +L + E
Sbjct: 483 VHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQVAAE 534
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 235 bits (575), Expect = 3e-60
Identities = 147/451 (32%), Positives = 241/451 (53%), Gaps = 17/451 (3%)
Query: 119 ESVAQSKALMGVAELAKGIQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDPP 178
+S+A+++ L+ L ++YE+ + + + E E + + +N++++L G++ P
Sbjct: 27 DSLAKNEELLKSINL--NVEYEKTTRLNLTFTPTLTE-EEQKKYLEKNQIKLL--GENIP 81
Query: 179 PPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTL 238
P TF+ + P+ I+ ++ PTPIQ +P L G DM+GIA TGSGKT F +
Sbjct: 82 PVAVTFEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKGNDMVGIAKTGSGKTASFLI 141
Query: 239 PIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLA 298
P +M Q N+GP L++ P+RELA QT ++ F +K+ G + C+
Sbjct: 142 PALMHISAQR---KISENDGPIVLVLSPTRELALQTDEVAAQFC--VKM-GYKHV--CI- 192
Query: 299 IGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEED 358
GG + ++ I+ ATPGRL+D L + N +L +DEADRM+DMGFE
Sbjct: 193 YGGEDRHRQINKLRFHPEIVTATPGRLIDFLQSGVFNPNRANFLVLDEADRMLDMGFEPQ 252
Query: 359 VRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNV-GRAGAASLTVRQDLEPAQ 417
+R I + R+T +FSAT PK+I+ A L P+ ++V G A + ++Q++ Q
Sbjct: 253 IRAIIASLTKDRETFMFSATWPKEIRQLASDFLSNPIHMHVGGEELATNERIQQNVLLLQ 312
Query: 418 PEARTVQLLHCLQKT-PPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAV 476
+ + + L++ +IFA+ K+ V + ++L K + ++IHG K Q+ER A+
Sbjct: 313 EHEKGEKCVEILKENQSKKIIIFAKTKRTVQQLSDFLKSKSIRCLSIHGDKTQQERVVAL 372
Query: 477 EAFRRGEK-DVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXX 535
+ F+ VLVATDVA++GLD +I V+NYD P DIE+YVHRI
Sbjct: 373 DKFKNARTGGVLVATDVAARGLDVTDIDLVLNYDFPGDIEDYVHRIGRTARGEKTGVAIT 432
Query: 536 XXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
+ + DLV +++ + Q P +L M
Sbjct: 433 FFTDENRFLASDLVEVIKNSAQVPPDWLSAM 463
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 235 bits (575), Expect = 3e-60
Identities = 135/397 (34%), Positives = 211/397 (53%), Gaps = 20/397 (5%)
Query: 170 ILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTG 229
+ VE + PPI F +LR + G + PTP+Q +P +LNG D+I + TG
Sbjct: 109 VKVEAGNHIPPIIDFPGCGIRNEVLRNVAHNGYKVPTPVQRYSIPYILNGEDLIVTSQTG 168
Query: 230 SGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTG 289
SGKT F LP+I + + P + +CP+RELA IQ F K
Sbjct: 169 SGKTAAFMLPVITQLIGT------CHSPNPSCVALCPTRELA------IQIFEETRKFCK 216
Query: 290 SPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADR 349
++++ GG ++E + + +G+ I++ATPGRL+D+L + + L+ R+L +DEADR
Sbjct: 217 GTDLKTTCVFGGAPITEQIRNLSRGIDIVIATPGRLIDILKQHCITLSEVRFLILDEADR 276
Query: 350 MIDMGFEEDVRTIFSYF----AGQRQTLLFSATMPKKIQNFARSALVRP--VTVNVGRAG 403
M+DMGFE ++ + + + A RQT+LFSAT P ++N AR +RP ++VG
Sbjct: 277 MLDMGFEPQMQEVINGWDMPPADDRQTMLFSATFPDAVRNLARD-FMRPKYCRISVGMQD 335
Query: 404 AASLTVRQDLEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAI 463
A ++ Q + +LL +++ PTL+FAERK VD + +L + VAI
Sbjct: 336 APK-SIEQRFIYCSEMDKFSELLGVIKEVDGPTLVFAERKVSVDRIERFLYDEHTAVVAI 394
Query: 464 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXX 523
HG + ++R A+ F G +++VATDVAS+GLD +N+ HVIN D+P D++ Y HRI
Sbjct: 395 HGERQMDQRLAALRQFTTGRANIMVATDVASRGLDISNVAHVINLDLPTDLDTYTHRIGR 454
Query: 524 XXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVP 560
+++ L L+ LR +P
Sbjct: 455 TGRAGKHGLATSFFNESNNAFLAQLIQHLRSKNLPIP 491
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 235 bits (574), Expect = 3e-60
Identities = 129/384 (33%), Positives = 214/384 (55%), Gaps = 15/384 (3%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPII- 241
+F + I + + +G P+PIQ Q +PAVL G+D++ A TG+GKT FTLP++
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 242 MFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGG 301
+ + K IR L++ P+RELA Q + ++ + ++L L RS + GG
Sbjct: 62 LLSKGNKAKAGQIR-----ALVLTPTRELAAQVSESVETYGKYLPL------RSAVVFGG 110
Query: 302 VAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRT 361
V ++ ++ ++ GV ++VATPGRL+D++ + +V+ N L +DEADRM+DMGF D++
Sbjct: 111 VPINPQIQKLRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKK 170
Query: 362 IFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEAR 421
I + +RQ L+FSAT +I+ A+ + +PV ++V AA+ TV+Q + P +
Sbjct: 171 ILALLPAKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQK 230
Query: 422 TVQLLHCL-QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
+ L+ + Q+ L+F+ K + + + L+ + A AIHG K Q R++A+ F+
Sbjct: 231 SALLIQLIKQEDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFK 290
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXP 540
GE VLVATD+A++GLD + V+N+D+P E+YVHRI
Sbjct: 291 SGEVRVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSE 350
Query: 541 DHSVLRDLVHLLREA--GQRVPGF 562
+ +LRD+ L+ Q + GF
Sbjct: 351 EFKLLRDIERLINRVLERQEIEGF 374
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 234 bits (573), Expect = 4e-60
Identities = 135/386 (34%), Positives = 205/386 (53%), Gaps = 15/386 (3%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F+H +P+ +L+ ++ G Q+PTPIQ Q P VL G D+IG+A TG+GKTL + +P +
Sbjct: 310 FEH--YPE-VLKSIKKAGFQRPTPIQSQAWPIVLQGMDLIGVAQTGTGKTLSYLIPGFIH 366
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
Q + GP L++ P+RELA Q + ++S GG
Sbjct: 367 LDSQPISRE--ERNGPGMLVLTPTRELALQVEAECSKY-------SYKGLKSVCVYGGGN 417
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
E ++ + KGV I++ATPGRL D+ K V L YL +DEAD+M+D+GFE + I
Sbjct: 418 RKEQIQHITKGVDIIIATPGRLNDLQMNKCVNLRSITYLVLDEADKMLDLGFEGQITKIL 477
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASL-TVRQDLEPAQPEART 422
RQT++ SAT P I+ ARS L P+ V VG ++ TV+QD+ E +
Sbjct: 478 LDVRPDRQTVMTSATWPHTIRQLARSYLKEPMIVYVGTLDLVAVHTVKQDIIVTTEEEKR 537
Query: 423 VQLLHCLQKTPPP--TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
+ L+ P +IF RK D + L ++GV ++HG ++Q +R +A++ FR
Sbjct: 538 TLIQEFLRNLAPEDKAIIFVSRKLVADDLSSDLSIQGVPVQSLHGNREQFDREQALDDFR 597
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXP 540
G +L+ATD+A++GLD ++ HV NYD P+++E YVHR+
Sbjct: 598 SGRVKILIATDLAARGLDVRDVTHVYNYDSPKNLEEYVHRVGRTGRAGKTGVSVTLMTQA 657
Query: 541 DHSVLRDLVHLLREAGQRVPGFLLDM 566
D + +L+ +L A Q VP LL M
Sbjct: 658 DWKIATELIKILERANQSVPEDLLKM 683
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 234 bits (573), Expect = 4e-60
Identities = 154/426 (36%), Positives = 220/426 (51%), Gaps = 21/426 (4%)
Query: 168 LRILVEGDD-PPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIA 226
L I V G D P I TF + + + + G P P+Q +P VL+ RD++ A
Sbjct: 116 LEIEVTGKDLPKDTIETFYDIDLGEELDHNIFKAGFYHPMPVQKATIPIVLDKRDLMSCA 175
Query: 227 FTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEG------PYGLIICPSRELAKQTHDIIQH 280
TGSGKT F PII L+ MP N P LI+ P+REL +Q ++
Sbjct: 176 QTGSGKTAAFLFPIISDILKNP-PMPRQSNFSHRVTVFPVALILAPTRELGQQIYE---- 230
Query: 281 FIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCR 340
++ T IRS GG ++ + KG I+VATPGRL+ +KK+V L+ R
Sbjct: 231 --EAVRFTEDTPIRSVCVYGGSDSYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLSSVR 288
Query: 341 YLCMDEADRMIDMGFEEDVRTIFSYF----AGQRQTLLFSATMPKKIQNFARSALVRPVT 396
YL DEADRM+DMGFE +R I G+RQTL+FSAT PK+IQ A L V
Sbjct: 289 YLIFDEADRMLDMGFEPQIREICEDNEMPPVGKRQTLMFSATFPKQIQRLAADFLDDYVF 348
Query: 397 VNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTP---PPTLIFAERKQDVDAVHEYL 453
+ VGRAG+ +++Q + + E + +L L + T+IF E K+ D + YL
Sbjct: 349 ITVGRAGSTVESIQQIILWVEEEIKQEAILDVLGEFAGKGQKTVIFVETKRGADILENYL 408
Query: 454 LLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPED 513
G + +IHG + Q +R +++ F+ +LVATDVAS+GLD +I+ VINYDMP +
Sbjct: 409 YDHGYKVDSIHGDRSQADRDFSLKRFKENVIQLLVATDVASRGLDIPDIEVVINYDMPNE 468
Query: 514 IENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGEPDVP 573
IE+YVHR+ +++ LV LL EA Q +P +L + E P
Sbjct: 469 IESYVHRVGRTGRAGKKGTAITFINEKTQNLIPPLVSLLEEAKQTIPDWLEEKAQEYRKP 528
Query: 574 APAGQG 579
+ +G
Sbjct: 529 FGSKRG 534
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 234 bits (573), Expect = 4e-60
Identities = 131/384 (34%), Positives = 213/384 (55%), Gaps = 15/384 (3%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPII- 241
+F + I + + +G P+PIQ Q +PAVL G+D++ A TG+GKT FTLP++
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 242 MFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGG 301
+ + K IR L++ P+RELA Q + ++ + ++L L RS + GG
Sbjct: 62 LLSKGNKAKAGQIR-----ALVLTPTRELAAQVSESVETYGKYLPL------RSAVVFGG 110
Query: 302 VAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRT 361
V ++ ++ ++ GV ++VATPGRL+D+ +K V+ N L +DEADRM+DMGF D++
Sbjct: 111 VPINPQIQKLRHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKK 170
Query: 362 IFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEAR 421
I + +RQ L+FSAT +I+ A+ + +PV ++V AA+ TV+Q + P +
Sbjct: 171 ILAMLPAKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQK 230
Query: 422 TVQLLHCL-QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
+ L+ + Q+ L+F+ K + + + L+ + A AIHG K Q R++A+ F+
Sbjct: 231 SALLIQLIKQEDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFK 290
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXP 540
GE VLVATD+A++GLD + V+N+D+P E+YVHRI
Sbjct: 291 SGEVRVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGALGQAVSLVSSE 350
Query: 541 DHSVLRDLVHLLREA--GQRVPGF 562
+ +LRD+ L+ Q V GF
Sbjct: 351 ETKLLRDIERLINRVLERQEVEGF 374
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 234 bits (572), Expect = 6e-60
Identities = 123/340 (36%), Positives = 201/340 (59%), Gaps = 11/340 (3%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F + IL+ +E +G +P+ IQ Q +PA+L G+D++ A TG+GKT FTLP+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPL-- 63
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
LE K ++ L++ P+RELA Q + ++++ +HL L +S + GGV
Sbjct: 64 --LEILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSL------KSTVVFGGV 115
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++ M +++G I++ATPGR+MD+ ++K VR + L +DEADRM+DMGF D++ I
Sbjct: 116 KINPQMMALRRGADILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLDMGFIHDIKKI 175
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
+ +RQ LLFSAT +I+ A+ + P+ ++V A +++V Q L P + +T
Sbjct: 176 LAILPKKRQNLLFSATFSPEIRQLAKGLVNNPIEISVTPRNATAVSVEQWLHPVDKKRKT 235
Query: 423 VQLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L+ + L+F+ K + + + L G+ A AIHG K Q R+RA+ F+
Sbjct: 236 ELLIQLIADGRWDQALVFSRTKHGANKITKQLEDAGIRASAIHGNKSQGARTRALADFKE 295
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
G +LVATD+A++GLD + HV+N+D+P+ E+YVHRI
Sbjct: 296 GRIRILVATDIAARGLDIEQLPHVVNFDLPDVAEDYVHRI 335
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 234 bits (572), Expect = 6e-60
Identities = 134/368 (36%), Positives = 195/368 (52%), Gaps = 10/368 (2%)
Query: 187 MKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLE 246
M+ + I L + PTPIQ Q +P +L G D+IG A TG+GKT F LPI+ +
Sbjct: 1 MQLSEAIQEALATEKYHTPTPIQGQAIPHLLEGSDLIGCAQTGTGKTAAFALPILN---Q 57
Query: 247 QEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSE 306
++ P L++ P+RELA Q + R++K R GGV +
Sbjct: 58 LDLDRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRNVKF------RLTTIFGGVGQNP 111
Query: 307 CMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYF 366
+ +++GVH+ +ATPGRL+D++D+ V L+ + +DEADRM+DMGF ++TI S
Sbjct: 112 QVRALKRGVHVAIATPGRLLDLMDQGYVDLSQAKTFVLDEADRMLDMGFMPALKTIVSKL 171
Query: 367 AGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLL 426
QRQT+ F+ATMP K+ A L PV + V + V Q L + L
Sbjct: 172 PKQRQTIFFTATMPPKVAQLASGLLNNPVRIEVAPESTTAERVEQRLMYVSQGDKRALLE 231
Query: 427 HCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKD 485
H LQ + TL+F + K D + + L G+ AIHG K Q +R+RA+E+FR G
Sbjct: 232 HSLQAEGVGRTLVFTKTKHGADRLAKELNASGIRTDAIHGNKTQNKRNRALESFRSGRLQ 291
Query: 486 VLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVL 545
VLVATDVA++G+D + HV+N+D+P D E+YVHRI +H L
Sbjct: 292 VLVATDVAARGIDVDGVTHVVNFDLPIDPESYVHRIGRTGRAGKEGIALSFCDFSEHGTL 351
Query: 546 RDLVHLLR 553
R + L+R
Sbjct: 352 RAIERLIR 359
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 234 bits (572), Expect = 6e-60
Identities = 162/436 (37%), Positives = 219/436 (50%), Gaps = 35/436 (8%)
Query: 153 ILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQG 212
I + E E R + I +EG D P PI++F + FP +L+ +E G +PTPIQ QG
Sbjct: 67 IAAMTEGEVEEYRRRREITIEGRDVPKPIKSFHDVGFPDYVLQEIEKAGFTEPTPIQAQG 126
Query: 213 MPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAK 272
P L GRD+IGIA TGSGKT+ + LP I+ Q + +GP L++ P+RELA
Sbjct: 127 WPMALKGRDLIGIAETGSGKTIAYLLPAIVHVNAQPI---LDHGDGPIVLVLAPTRELAV 183
Query: 273 QTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKK 332
Q IQ K S I++ GGV + +QKGV I++ATPGRL+DML+
Sbjct: 184 Q----IQQ--EATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESN 237
Query: 333 MVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALV 392
L + +DEADRM+DMGFE +R S RQTL +SAT PK + N SA
Sbjct: 238 HTNLRRVT-IVLDEADRMLDMGFEPQIRKCIS-DTPDRQTLYWSATWPKNV-NHVSSAC- 293
Query: 393 RPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEY 452
R G Q + V+LL + LIF K D V
Sbjct: 294 ------GNRLG------------DQKYNKLVKLLEDIM-DGSRILIFRTLK-GCDQVTRQ 333
Query: 453 LLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPE 512
L + G A++IHG K Q ER + F+ G+ ++ ATDVA++GLD +++ VINYD P
Sbjct: 334 LRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYDFPG 393
Query: 513 DIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGEPDV 572
+E+YVHRI + +DLV++L EAGQ+V L M G
Sbjct: 394 SLEDYVHRIGRTGRAGASGTAYTFFTAANARFAKDLVNILEEAGQKVSPELAKM-GR-GA 451
Query: 573 PAPAGQGCSYCAGLGH 588
P P G G G G+
Sbjct: 452 PPPPGHGGFRDRGRGY 467
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 234 bits (572), Expect = 6e-60
Identities = 149/436 (34%), Positives = 229/436 (52%), Gaps = 18/436 (4%)
Query: 137 IQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRG 196
IQY++ K + I L ++N + + V G PP P+ +F H F K ++
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 197 LEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIR- 255
+ ++PTPIQ +P+ L+GRD++GIA TGSGKT + P I+ ++Q P ++
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQ----PDLKA 335
Query: 256 NEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGV 315
EGP +I+ P+RELA Q + F + + +P C GG + E+ +G
Sbjct: 336 GEGPVAVIVVPTRELAIQVFQEAKKFCKVYNI--NP---ICAYGGGSKWEQSNELQNEGA 390
Query: 316 HIMVATPGRLMDMLDKKMVRLNVCR--YLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTL 373
++V TPGR++D++ KM N R +L DEADRM DMGFE V++I + RQ L
Sbjct: 391 EMVVCTPGRIIDLV--KMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQCL 448
Query: 374 LFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQ-PEARTVQLLHCLQK- 431
+FSAT +K++ AR ALV PV + G G A+ + Q + Q + + L+ L +
Sbjct: 449 MFSATFKQKVERLARDALVDPVRIVQGEVGEANADIEQKVFVMQNQDVKLHWLIRNLVEF 508
Query: 432 -TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVAT 490
+ LIF +K D + V + L +K + V +HG Q ER+ + FR+ + +LVAT
Sbjct: 509 ASLGKVLIFVTKKLDSEDVAKKLKMKDFDIVLLHGDMLQAERNENLLKFRK-KSQILVAT 567
Query: 491 DVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVH 550
DVA++GLD + I+ VIN+DM DI+ +VHRI D ++ LV
Sbjct: 568 DVAARGLDISEIRTVINFDMARDIDTHVHRIGRTGRAGHKGTAYTLVTEKDIEMVGHLVK 627
Query: 551 LLREAGQRVPGFLLDM 566
L Q VP L+D+
Sbjct: 628 NLESVSQEVPKPLMDL 643
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 233 bits (571), Expect = 8e-60
Identities = 122/341 (35%), Positives = 202/341 (59%), Gaps = 9/341 (2%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TF + IL + +G PTPIQ Q +P++L G+D++ A TG+GKT FTLP++
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLL- 64
Query: 243 FCLEQEVKMPFIRNEGPY-GLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGG 301
+ L+ P LI+ P+RELA Q + ++ + ++L L R+ + GG
Sbjct: 65 YRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLAL------RTAVVFGG 118
Query: 302 VAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRT 361
+ + + +Q GV I+VATPGRL+D++++K V + L +DEADRM+DMGF D++
Sbjct: 119 INIEPQIAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKR 178
Query: 362 IFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEAR 421
+ + + QRQ+L+FSAT +I+ A S L +PV + + ++ + +P+++
Sbjct: 179 VMALLSPQRQSLMFSATFSGEIRKLADSLLKQPVRIEAAVQNTVNESISHVIHWVKPDSK 238
Query: 422 TVQLLHCL-QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
LLH + Q+ LIF + K + + L + AVAIHG ++Q++R++A+ F+
Sbjct: 239 FALLLHLIRQQNLKQALIFVKTKHGASHLAQMLSRHEISAVAIHGDRNQQQRTQALAEFK 298
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
G+ +LVATDVA++G+D + HVINY++P + E+YVHRI
Sbjct: 299 HGDVQILVATDVAARGIDIEKLSHVINYELPGNPEDYVHRI 339
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 233 bits (570), Expect = 1e-59
Identities = 131/407 (32%), Positives = 221/407 (54%), Gaps = 15/407 (3%)
Query: 153 ILELPETRHEMIR-NKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQ 211
I + E EM R N I+V G + P PI+ F P IL LE K +K IQ+Q
Sbjct: 539 ITNMTEKDVEMFRKNNGNIVVRGKNCPRPIQYFYQCGLPGKILNILEKKNFKKMFSIQMQ 598
Query: 212 GMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELA 271
+PA++ GRD+I IA TGSGKT+ + P+I L Q+ N+GP G+I+ P+REL+
Sbjct: 599 AIPALMCGRDIIAIAETGSGKTISYLFPLIRHVLHQD---KLRNNDGPIGIILTPTRELS 655
Query: 272 KQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDML-- 329
Q + + + + +++ GG + + V++KGV I+V TPGR++D+L
Sbjct: 656 IQVKNEASIYCKAV------DLKILAVYGGSNIGAQLNVLKKGVEIIVGTPGRIIDILTI 709
Query: 330 -DKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFAR 388
+ K+ LN ++ +DEADR++D+GFE + +I + +QT + SAT P IQN A+
Sbjct: 710 SNSKVTNLNRASFIVLDEADRLLDLGFESQIHSILNNCRKDKQTAMISATFPNYIQNLAK 769
Query: 389 SALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPP--TLIFAERKQDV 446
L +P+ + VG G + + Q +E + + + +LL L + LIF ++ +
Sbjct: 770 KLLYKPIEIIVGEKGKTNNNIYQFVEVLEEKKKLFRLLKLLGEWIKYGLILIFVNKQLEA 829
Query: 447 DAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVI 506
D ++ L + + +HGG+DQ +R +++F+ + +L+AT V ++G+D NI VI
Sbjct: 830 DLLYLELFKYEYKTLVLHGGQDQSDREHTLKSFKDEQNKILIATSVMARGIDIKNIILVI 889
Query: 507 NYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLR 553
NY+ P+ IE+Y+H+I +H+ D+ +L++
Sbjct: 890 NYECPDHIEDYIHKIGRTGRSNNIGYAYTFITPNEHTKAYDIYNLIK 936
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 232 bits (568), Expect = 2e-59
Identities = 138/399 (34%), Positives = 208/399 (52%), Gaps = 14/399 (3%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F+ + + IL+ +E +G Q PTPIQ + +P +L+G D++G A TG+GKT F +P++
Sbjct: 84 FRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQL 143
Query: 244 --CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGG 301
++ K IR+ LII P+RELA Q + + + RH LT S + GG
Sbjct: 144 LNAVKTNEKKRKIRS-----LIITPTRELAIQIGESFKAYGRHTGLT------STVIFGG 192
Query: 302 VAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRT 361
V + +QKG+ I++ATPGRL+D++++ + L + +DEADRM+DMGF D+R
Sbjct: 193 VNQNPQTASLQKGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRK 252
Query: 362 IFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEAR 421
I + ++Q+L FSATMP +I A S L PV V+V + + Q + +
Sbjct: 253 ILAELPKKKQSLFFSATMPPEITRLAASILHNPVEVSVTPVSSTVEIINQQIFFVDKGNK 312
Query: 422 TVQLLHCLQKTPPPT-LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
L+H L+ T L+F K D V +YLL + A AIHG K Q R RA+ F+
Sbjct: 313 NNLLVHLLKNQDIKTALVFTRTKHGADKVVKYLLKHDITAAAIHGNKAQNARQRALTNFK 372
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXP 540
VLVATD+A++G+D +++VIN+DM E YVHRI
Sbjct: 373 EQTMRVLVATDIAARGIDVDELEYVINFDMSNIAETYVHRIGRTGRAGAKGTAISFCDAE 432
Query: 541 DHSVLRDLVHLLREAGQRVPGFLLDMLGEPDVPAPAGQG 579
+ LRD+ L+ + V ++ V P QG
Sbjct: 433 EKEYLRDVEKLIAKKIPVVESHPFPLIDHNPVKTPKQQG 471
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 232 bits (568), Expect = 2e-59
Identities = 142/371 (38%), Positives = 202/371 (54%), Gaps = 17/371 (4%)
Query: 157 PETRHEMIRNKLRILVEGDDP-PPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPA 215
P E I I++EG+ P P P+ TF F + I ++ +PTPIQ G +
Sbjct: 293 PGEEIERILKAHNIIIEGEHPLPKPVTTFDEAVFNQQIQNIIKESNFTEPTPIQKVGWTS 352
Query: 216 VLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTH 275
L GRD+IG++ TGSGKTL F LP ++ L Q P + GP LI+ P+REL Q
Sbjct: 353 CLTGRDIIGVSQTGSGKTLTFLLPGLLHLLAQ----PPVGTGGPIMLILSPTRELCLQIA 408
Query: 276 DIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVR 335
+ + + R L L P GG + + +Q G IMVATPGRL++ L ++
Sbjct: 409 EEARPYSRLLNLRLVP------IYGGASKFAQVRELQNGAEIMVATPGRLLEFLSNGTIK 462
Query: 336 LNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARS-ALVRP 394
LN Y MDEADRM+DMGFE +R I RQTL+FSAT P +I+ A
Sbjct: 463 LNRVSYFVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPSEIKRLASEFCKANS 522
Query: 395 VTVNVGRAG-AASLTVRQDLE-PAQPEARTVQLLHCLQKTPP--PTLIFAERKQDVDAVH 450
+ + VG A+ +RQ++E P E R +L L PP LIF++ K D +
Sbjct: 523 IYIQVGDLELTANPNIRQNVEFPNSYEVRD-KLFDFLGSIPPEKKVLIFSDLKSFADQLT 581
Query: 451 EYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDM 510
L + ++ ++HG K Q +R R + FR G+ +VLVATDVA++GLD +I +VIN D+
Sbjct: 582 SALRYRRFKSASLHGNKTQAQRERILNMFRSGDVNVLVATDVAARGLDIKDIDYVINLDV 641
Query: 511 PEDIENYVHRI 521
P+ + +Y+HRI
Sbjct: 642 PKSLLDYIHRI 652
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 232 bits (568), Expect = 2e-59
Identities = 149/407 (36%), Positives = 211/407 (51%), Gaps = 18/407 (4%)
Query: 164 IRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMI 223
+R K+ I V G P P +F H F + ++ + +PT IQ Q +P L+GRD+I
Sbjct: 88 LRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDII 147
Query: 224 GIAFTGSGKTLVFTLPIIMFCLEQ-EVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFI 282
GIA TGSGKT F P ++ ++Q E+++ +GP LI P+REL +Q + + F
Sbjct: 148 GIAKTGSGKTAAFLWPALVHIMDQPELQV----GDGPIVLICAPTRELCQQIYTEARRFG 203
Query: 283 RHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYL 342
+ + I GG E + +Q+G I+VATPGRL+D + K L+ YL
Sbjct: 204 K------AYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYL 257
Query: 343 CMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRA 402
DEADRM DMGFE VR+I + RQTLLFSAT KK+++ R LV PV V +G
Sbjct: 258 VFDEADRMFDMGFEPQVRSIANNVRPDRQTLLFSATFKKKVEHLCRDILVDPVRVVIGEL 317
Query: 403 GAASLTVRQDLE-----PAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKG 457
G A+ V Q + P++ E T L+ + LIF +K + + + L
Sbjct: 318 GEANEDVTQIVHIFNSMPSKWEWLTQNLVSF--ASAGSVLIFVTKKLNSEELATNLRKND 375
Query: 458 VEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENY 517
E +HG DQ ERS+ + F++ E +LVATDVA++GLD +I+ VINYD+ DI +
Sbjct: 376 FEVALLHGDMDQFERSKVLGQFKKREIPILVATDVAARGLDIPSIKTVINYDVARDITTH 435
Query: 518 VHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLL 564
HRI D + DLV L A Q VP L+
Sbjct: 436 THRIGRTGRAGEKGNAYTLLTQSDQNFAGDLVRNLEIANQVVPESLM 482
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 232 bits (567), Expect = 2e-59
Identities = 127/340 (37%), Positives = 193/340 (56%), Gaps = 9/340 (2%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TF + + L G PTPIQ Q +P +L GRD++ A TG+GKT + LP+I
Sbjct: 4 TFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQ 63
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
Q + ++ P LI+ P+RELA+Q D ++ + +H E+ GG
Sbjct: 64 MLSRQSREETAPKH--PRALILAPTRELAQQVFDNLKQYAQHT------ELAIVTVYGGT 115
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++ E + KGV I++ATPGRL+D L K LN + L +DEADRM+DMGF D++ I
Sbjct: 116 SIRVQQEQLAKGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGFLPDIQRI 175
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
+RQTLLFSAT +++ A + PV V V A + + TV+Q + P + ++
Sbjct: 176 MKRMPEERQTLLFSATFETRVKALAYRLMKEPVEVQVAAANSTADTVKQMVYPVDKKRKS 235
Query: 423 VQLLHCL-QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L + + + L+F + KQ DA+ L L G++A +I+G K Q R +A++ F+
Sbjct: 236 ELLAYLIGSRNWQQVLVFTKTKQGSDALVSELKLDGIKAASINGDKSQGARQKALDDFKS 295
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
G+ L+ATDVA++GLD A ++ V+N+DMP E+YVHRI
Sbjct: 296 GKVRALIATDVAARGLDIAQLEQVVNFDMPYKAEDYVHRI 335
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 232 bits (567), Expect = 2e-59
Identities = 140/430 (32%), Positives = 219/430 (50%), Gaps = 15/430 (3%)
Query: 137 IQYEEPIKTSWRPPRCILELPETRHEMIRNKLR-ILVEGDDPPPPIRTFQHMKFPKGILR 195
I YE K + + I + + + +R +L I G P PI+T+ H I
Sbjct: 284 IDYEPVKKDFYIESKEISSMTKAQTRALRAELDGIKCRGKKVPKPIKTWAHAGLSGRIHE 343
Query: 196 GLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIR 255
+ G +KP PIQ Q +P +++GRD IGIA TGSGKTL + LP++ QE P
Sbjct: 344 LIRRCGFEKPMPIQAQALPVIMSGRDCIGIAKTGSGKTLAYILPMLRHINAQE---PLKN 400
Query: 256 NEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGV 315
+GP G+I+ P+REL Q I + R+ K G + GG ++ + +++G
Sbjct: 401 GDGPIGMIMGPTRELVTQ---IGKEAKRYGKALG---FNAVSVYGGSGIAAQIGELKRGA 454
Query: 316 HIMVATPGRLMDMLDK---KMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQT 372
I+ TPGR++D+L K+ L Y+ +DEADRM DMGFE + I + RQT
Sbjct: 455 EIVACTPGRMIDILTTGGGKITNLRRVTYIVLDEADRMFDMGFEPQITRILANLRPDRQT 514
Query: 373 LLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQK- 431
++FSAT P ++ AR+AL PV + +G + + Q +E E R +++L L +
Sbjct: 515 VMFSATFPHTMEALARAALENPVEIQIGGKSVVNSDIDQVVEIRPEEDRFLRVLELLGEW 574
Query: 432 -TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVAT 490
+IF + D+ + LL G +++HG K+Q +R + F+ ++LVAT
Sbjct: 575 CERGKIIIFVASQDKADSTFKELLKSGYPCLSLHGSKEQSDRHSTISDFKSDVCNILVAT 634
Query: 491 DVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVH 550
VA++GLD +++ VINYD P +E+YVHR+ + DLV
Sbjct: 635 SVAARGLDVKDLRLVINYDTPNHLEDYVHRVGRTGRAGQKGTAVTFISEDEEKFAPDLVK 694
Query: 551 LLREAGQRVP 560
L+++ Q VP
Sbjct: 695 ALKDSKQTVP 704
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 232 bits (567), Expect = 2e-59
Identities = 136/407 (33%), Positives = 222/407 (54%), Gaps = 15/407 (3%)
Query: 153 ILELPETRHEMIR-NKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQ 211
I + ++ +M R N I+V G + P P++ F P IL+ LE K +K IQ+Q
Sbjct: 693 ITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQ 752
Query: 212 GMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELA 271
+PA++ GRD+I IA TGSGKTL + P+I L QE P N+GP +I+ P+REL+
Sbjct: 753 TIPALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQE---PLRNNDGPISIILTPTRELS 809
Query: 272 KQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDML-- 329
Q + + + + + + EI + GG ++ ++V++KGV I+V TPGR++D+L
Sbjct: 810 IQVKNEAKIYCKAVNI----EILA--VYGGSNIARQLKVLKKGVEILVGTPGRIIDILTI 863
Query: 330 -DKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFAR 388
+ K+ LN ++ +DEADR++D+GFE + I +QT + SAT P IQN A+
Sbjct: 864 SNCKVTNLNRVSFVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQNMAK 923
Query: 389 SALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPP--TLIFAERKQDV 446
L +P+ + VG G + + Q +E + + +LL L + LIF ++ +
Sbjct: 924 KLLYKPIEIIVGEKGKTNNNIYQFVEIIEESKKVFRLLKLLGEWIKYGLVLIFVNKQIEA 983
Query: 447 DAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVI 506
D ++ L + +HGG+DQ +R +E F++ E VL+AT V ++G+D NI VI
Sbjct: 984 DLLYLELYKYDYNLLVLHGGQDQTDRQFTLEKFKKEENKVLIATSVMARGIDIKNIILVI 1043
Query: 507 NYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLR 553
NY P+ IE+Y+HRI +++ D+ +LL+
Sbjct: 1044 NYQCPDHIEDYIHRIGRTGRSNNIGYAYTFILPNEYTKAYDIYNLLK 1090
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 231 bits (565), Expect = 4e-59
Identities = 148/444 (33%), Positives = 226/444 (50%), Gaps = 21/444 (4%)
Query: 170 ILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTG 229
I V G P PI F P IL L+ + +KP PIQ+Q +PA++ GRD++ IA TG
Sbjct: 376 IRVRGKYCPRPIYNFSQCGLPDPILSLLQRRNYEKPFPIQMQCIPALMCGRDVLAIAETG 435
Query: 230 SGKTLVFTLPIIMFCLEQEVKMPFIR-NEGPYGLIICPSRELAKQTHDIIQHFIRHLKLT 288
SGKT+ + LP I L Q P +R NEG LII P+RELA Q I + KL
Sbjct: 436 SGKTMAYLLPAIRHVLYQ----PKLRENEGMIVLIIAPTRELASQ---IGVESSKLCKLV 488
Query: 289 GSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDML---DKKMVRLNVCRYLCMD 345
G IR+ GG + E + +++GV I+ TPGRL+++L + K+ L ++ +D
Sbjct: 489 G---IRTKAVYGGSPIGEQLNALKRGVEIVCGTPGRLIEVLTISNGKVTNLRRVTFVVID 545
Query: 346 EADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAA 405
EADRM D+GF + I RQT LFSAT P I+ A+ L +P+ + VG +G +
Sbjct: 546 EADRMFDLGFSPQISAIVDNIRPDRQTALFSATFPPTIEALAKKILTKPLQIIVGESGKS 605
Query: 406 SLTVRQDLEPAQPEARTVQLLHCLQKTPP--PTLIFAERKQDVDAVHEYLLLKGVEAVAI 463
+ V Q + + LL L + ++F R+ D D+++ L+ G + +
Sbjct: 606 ASQVDQHVMVLPERQKMYALLKLLGEWHEHGSIIVFVNRQLDADSMYAELIKHGYDCAVL 665
Query: 464 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXX 523
HGG+DQ +R ++ FR G K +L+AT +A++G+D N+ VINY P+ IE+YVHR+
Sbjct: 666 HGGQDQTDREFTLQDFRDGTKGILIATSIAARGIDVKNVVLVINYATPDHIEDYVHRVGR 725
Query: 524 XXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM----LGEPDVPAPAGQG 579
+ + D++ ++ + Q VP L ++ L D G
Sbjct: 726 TGRAGNIGTSYTFITPEEGAKSHDIIKAMKASNQVVPIELQELAEMHLATLDGRQKVRLG 785
Query: 580 CSYCAGLGHRITECPKLEAVQNKQ 603
+ G G + T+ K Q +Q
Sbjct: 786 GGF-GGRGFKFTDAEKSRQQQERQ 808
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 230 bits (563), Expect = 7e-59
Identities = 132/370 (35%), Positives = 201/370 (54%), Gaps = 10/370 (2%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TF + + R L + PTPIQ + +P L GRDM+GIA TG+GKT F LP++
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
+ K P R LI+ P+RELA Q + I G+P I C+ GGV
Sbjct: 65 HLMTVGGK-PTTRTTK--ALILSPTRELAVQIAESIADLSE-----GTP-ISHCVVFGGV 115
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
+V ++ + +GV I+VATPGRL+D+++++ + L R+L +DEADRM+DMGF DV I
Sbjct: 116 SVRPQIQALARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKI 175
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
RQ+++FSATMPK I++ ++ L P V+V A + Q + A+
Sbjct: 176 VGKCPDDRQSMMFSATMPKPIEDLSKKILTNPQKVSVTPAVVTVEKIAQSVFSVPQRAKK 235
Query: 423 VQLLHCLQKTPPPTL-IFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L+ + K + +F K + + L G++A+AIHG K Q R +A+ AF+
Sbjct: 236 HWLIDFVSKNDTGRIVVFTRTKHGANRLTSDLDKAGIQALAIHGNKSQTARQKALGAFQD 295
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPD 541
GE DVLVATD+ ++G+ +I HV+N+D+PE+ E+YVHRI +
Sbjct: 296 GEIDVLVATDIVARGIHVDDISHVVNFDLPEEPESYVHRIGRTARAGRSGQAIALVDPSE 355
Query: 542 HSVLRDLVHL 551
+ L+ ++ L
Sbjct: 356 RAKLKQIIKL 365
>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
franciscana|Rep: VASA RNA helicase - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 726
Score = 230 bits (562), Expect = 1e-58
Identities = 136/402 (33%), Positives = 213/402 (52%), Gaps = 13/402 (3%)
Query: 172 VEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSG 231
V G+ P I +F IL ++ G +PTP+Q +P ++ RD++ A TGSG
Sbjct: 294 VTGEGLPSGIDSFDAAGLRPKILDNIKKSGYTQPTPVQKWAIPVIMKKRDLMACAQTGSG 353
Query: 232 KTLVFTLPIIMFCLEQE-VKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGS 290
KT + +PII +E+ + + P +++CP+RELA IQ F +K +
Sbjct: 354 KTGAYLIPIINRLIEEGCAASSYDETQTPEAVVMCPTRELA------IQIFKEAVKFSYD 407
Query: 291 PEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRM 350
I+ + GGVA + V+ G +I+V TPGRL+D +++ + + C++L +DEADRM
Sbjct: 408 TIIKPVVVYGGVAPRYQSDKVKSGCNILVGTPGRLIDFMNRGVFNFSACKFLVLDEADRM 467
Query: 351 IDMGFEEDVRTIFSY----FAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAAS 406
+DMGF +V+ + + +R TL+FSAT P ++Q A L + V VG G A
Sbjct: 468 LDMGFMGEVKKVVYHGTMPVKVERNTLMFSATFPNEVQELAAEFLENYIFVTVGTVGGAC 527
Query: 407 LTVRQDLEPAQPEARTVQLLHCL-QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHG 465
+ V Q++ ++R +LL L +K TL+FA K+ D + L K + A +IHG
Sbjct: 528 MDVLQEVIEIDAKSRIDRLLEILTEKEGVKTLVFASSKKTADFLAALLSTKNLPATSIHG 587
Query: 466 GKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXX 525
+ Q +R + F+ G +++LVAT VA++GLD + VINY++P DI+ YVHRI
Sbjct: 588 DRFQYQREEVLRDFKSGHRNILVATAVAARGLDIKGVGLVINYELPTDIDEYVHRIGRTG 647
Query: 526 XXXXXXXXXXXXX-XPDHSVLRDLVHLLREAGQRVPGFLLDM 566
D ++ LV++L A Q VP FL M
Sbjct: 648 RLGNTGHAISFFNPDKDSAIAGKLVNVLAAAQQTVPVFLESM 689
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 230 bits (562), Expect = 1e-58
Identities = 130/407 (31%), Positives = 217/407 (53%), Gaps = 15/407 (3%)
Query: 153 ILELPETRHEMIR-NKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQ 211
I + E+ ++ R N I+V G + P P++ F P IL LE K +K IQ+Q
Sbjct: 639 ITNMKESDVDLFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILPILERKQFKKMFGIQMQ 698
Query: 212 GMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELA 271
+PA++ GRD+I IA TGSGKTL + P+I L Q P N+GP +I+ P+REL+
Sbjct: 699 TIPALMCGRDVIAIAETGSGKTLSYLFPLIRHVLHQP---PLRNNDGPIAIILTPTRELS 755
Query: 272 KQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDML-- 329
KQ + + + + L R GG + + +++GV I+V TPGR++D+L
Sbjct: 756 KQVKSEARPYCQAVNL------RILAVYGGSNIGTQLNTLKRGVEILVGTPGRIIDILTI 809
Query: 330 -DKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFAR 388
+ K+ LN ++ +DEADR++D+GFE + I + +QT + SAT P IQN A+
Sbjct: 810 SNCKVTNLNRVSFVVLDEADRLLDLGFESQIHNILNNCRKDKQTAMISATFPNYIQNLAK 869
Query: 389 SALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPP--TLIFAERKQDV 446
L +P+ + VG G + + Q +E + + +LL L + LIF R+ +
Sbjct: 870 KLLYKPIEIIVGEKGKTNNNIYQFVEVLEGGKKIYRLLKLLGEWSSYGLILIFVNRQLEA 929
Query: 447 DAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVI 506
D ++ L + + +HGG+DQ +R ++ F+ G+ +L+AT V ++G+D +I VI
Sbjct: 930 DLLYLELFKYDYKTLVLHGGQDQADREFTLQTFKEGKNKILIATSVMARGIDIKDIIVVI 989
Query: 507 NYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLR 553
NY+ P+ +E+Y+HR+ +H+ D+ L++
Sbjct: 990 NYECPDHLEDYIHRVGRTGRSNKIGYAYTFVSPEEHAKAYDIYSLIK 1036
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 229 bits (561), Expect = 1e-58
Identities = 132/378 (34%), Positives = 200/378 (52%), Gaps = 15/378 (3%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F + L L G + PTPIQ Q +P L G+D+IG A TG+GKT F LP+I
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLI- 63
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
++ P G L++ P+RELA Q + ++ F H + +R + IGGV
Sbjct: 64 ---DRLAGKP-----GTRALVLAPTRELALQIGEELERF-GHAR-----RVRGAVIIGGV 109
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
+++ E +++ I++ATPGRL+D L++ RL+ L +DEADRM+DMGF+ + I
Sbjct: 110 GMAQQAEALRQKREIVIATPGRLVDHLEQGNARLDGIEALVLDEADRMLDMGFKPQLDRI 169
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
QRQTLLFSATM ++ +FAR+ L PV V V R+G + Q + A +
Sbjct: 170 LRRLPKQRQTLLFSATMAGEVADFARAHLRDPVRVEVARSGTTAARAEQQVFLADQHEKL 229
Query: 423 VQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG 482
LL L++ TLIF K+ D + +++ G + IH + Q +R A++ F+ G
Sbjct: 230 PLLLTLLERDGDSTLIFTRTKRRADKIWKHIGRAGHKVARIHADRSQAQRRMALDGFKDG 289
Query: 483 EKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDH 542
VLVATD+A++G+D A I HV+N+D+P E+YVHR+ +
Sbjct: 290 TYRVLVATDIAARGIDVAEIGHVVNFDLPHVPEDYVHRVGRTARAAASGRASSFSAPDER 349
Query: 543 SVLRDLVHLLREAGQRVP 560
+L + L R R P
Sbjct: 350 DLLHAIERLTRAVLPRAP 367
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 229 bits (561), Expect = 1e-58
Identities = 137/391 (35%), Positives = 212/391 (54%), Gaps = 24/391 (6%)
Query: 180 PIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLP 239
P+ +F F K +LR + A+ + P+PIQ Q P +++G DM+GIA TGSGKTL F +P
Sbjct: 27 PVSSFADAGFSKELLR-VTAQ-FKTPSPIQAQSWPIIMSGHDMVGIAATGSGKTLAFGMP 84
Query: 240 IIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAI 299
L Q P + P L++ P+RELA+QT + G C+ +
Sbjct: 85 ----ALTQIHSQPPCKPGQPICLVLAPTRELAQQTAKVFDD-------AGEASGVRCVCV 133
Query: 300 GGVAVSECMEVVQK---GVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFE 356
G A + K G ++VATPGRL D +++ +++L+ L +DEADRM+D+GFE
Sbjct: 134 YGGAPKYEQKAQMKAGGGAAVIVATPGRLRDFMEEGVIKLDRVTMLVLDEADRMLDLGFE 193
Query: 357 EDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG-AASLTVRQDLEP 415
++R I RQT++FSAT P+ +Q+ A + P+ V +G G AS ++ Q +E
Sbjct: 194 PEIRAIAGATRADRQTVMFSATWPQSVQSLASEFMCNPIKVRIGAEGLKASQSITQIVEV 253
Query: 416 AQPEARTVQLLHCLQ------KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQ 469
+P+ + L ++ K P TLIF K++ +H+ L + AV IHG Q
Sbjct: 254 VEPQDKDRHLARVMKQYLGKGKEVPRTLIFGLYKKECANLHQ-RLSREWPAVCIHGDMSQ 312
Query: 470 EERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXX 529
+R ++V+AF++G +L+ATDVA++GLD +++VINY P E+YVHRI
Sbjct: 313 HDREKSVDAFKKGTSRILIATDVAARGLDIKEVEYVINYTFPLTTEDYVHRIGRTGRAGA 372
Query: 530 XXXXXXXXXXPDHSVLRDLVHLLREAGQRVP 560
D + +LV++LR+AG VP
Sbjct: 373 TGLAHTFFTLHDKARAGELVNVLRKAGAEVP 403
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 229 bits (560), Expect = 2e-58
Identities = 141/383 (36%), Positives = 200/383 (52%), Gaps = 15/383 (3%)
Query: 189 FPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQE 248
F I ++ G PTPIQ Q P L RD++ +A TGSGKTL + +P F L +
Sbjct: 238 FKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIP--GFILLK- 294
Query: 249 VKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECM 308
++ +GP L++ P+RELA Q D + F R S I S GG +
Sbjct: 295 -RLQHNSRDGPTVLVLSPTRELATQIQDEAKKFGR------SSRISSVCLYGGAPKGPQL 347
Query: 309 EVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAG 368
+++G I+VATPGRL D+L+ + V L+ YL +DEADRM+DMGFE +R I
Sbjct: 348 RDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQP 407
Query: 369 QRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG--AASLTVRQDLEPAQPEARTVQLL 426
+RQTL+F+AT PK+++ A L PV VN+G A+ ++ Q ++ P ++ +L
Sbjct: 408 KRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLD 467
Query: 427 HCLQKTPPPT--LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEK 484
L+ P + +IF K+ D + L + A AIHG K Q ER + FR G
Sbjct: 468 QILRSQEPGSKIIIFCSTKRMCDQLARN-LARQYGASAIHGDKSQAERDSVLSEFRSGRC 526
Query: 485 DVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSV 544
+LVATDVA++GLD +I+ V+NYD P +E+YVHRI D
Sbjct: 527 PILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKY 586
Query: 545 LRDLVHLLREAGQRVPGFLLDML 567
DLV +L A Q V L DM+
Sbjct: 587 ASDLVKILEGANQSVSQQLRDMV 609
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 229 bits (559), Expect = 2e-58
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 16/379 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TF+++ + IL+ L +G PTPIQ Q +P +L G+D++G A TG+GKT F++PI+
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
+ + +G L++ P+RELA Q + + + R+ TG ++ + GGV
Sbjct: 62 KLYKTD------HRKGIKALVLTPTRELAIQIGESFEAYGRY---TG---LKHAVIFGGV 109
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
+ ++ G+ I+VATPGRL+D++ + + L+ + +DEADRM+DMGF D++ I
Sbjct: 110 GQKPQTDALRSGIQILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRI 169
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
+RQTL FSATMP +I+ A S L +P V V A + + Q + + + +
Sbjct: 170 LKLLPARRQTLFFSATMPPEIETLANSMLTKPEKVEVTPASSTVDIISQQVYFVEKKEKK 229
Query: 423 VQLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L+H L+ T LIF K D + L G+ A AIHG K Q R RA+ F+
Sbjct: 230 DLLIHLLKDTSIESVLIFTRTKYGADKLARVLTKAGIGAEAIHGNKTQNARQRALTNFKN 289
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPD 541
L+ATD+A++G+D + HVINY++P E YVHRI +
Sbjct: 290 HTLRALIATDIAARGIDVDQLSHVINYELPNVPETYVHRIGRTGRAGHEGVAISFCESEE 349
Query: 542 HSVLRDLVHLLREAGQRVP 560
L+D+ L+ G+ +P
Sbjct: 350 LPYLKDIQKLI---GKNIP 365
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 229 bits (559), Expect = 2e-58
Identities = 137/409 (33%), Positives = 213/409 (52%), Gaps = 17/409 (4%)
Query: 162 EMIRNKLR-ILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGR 220
E R+ L I V+G P PI+T+ K + L G +KPTPIQ Q +PA+++GR
Sbjct: 489 EKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGR 548
Query: 221 DMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRN-EGPYGLIICPSRELAKQTHDIIQ 279
D+IGIA TGSGKTL F LP+ L+Q P + + +G +I+ P+REL Q I+
Sbjct: 549 DLIGIAKTGSGKTLAFILPMFRHILDQ----PSMEDGDGAIAIIMAPTRELCMQIGKDIR 604
Query: 280 HFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDML---DKKMVRL 336
F + L L R GG +SE + +++G I+V TPGR++DML ++ L
Sbjct: 605 KFSKSLGL------RPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNL 658
Query: 337 NVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVT 396
Y+ +DEADRM DMGFE V I RQT++FSAT P++++ AR L +P+
Sbjct: 659 RRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIE 718
Query: 397 VNVGRAGAASLTVRQDLEPAQPEARTVQLLHCL--QKTPPPTLIFAERKQDVDAVHEYLL 454
V VG V Q + +A+ +LL L + ++F +++++ D + L+
Sbjct: 719 VIVGGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLM 778
Query: 455 LKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDI 514
+++HGG DQ +R + F+ G+ +L+AT VA++GLD ++ V+NYD+P
Sbjct: 779 KASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHY 838
Query: 515 ENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFL 563
E+YVHR D++ + +G +P L
Sbjct: 839 EDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAEL 887
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 229 bits (559), Expect = 2e-58
Identities = 138/409 (33%), Positives = 210/409 (51%), Gaps = 23/409 (5%)
Query: 165 RNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIG 224
R K +L+EG P P + F +FP+ + G PT IQ Q P +L G D++G
Sbjct: 95 RKKHNVLIEGKSQPNPFQKFTDYEFPRMFQHIFQ--GFTAPTVIQGQSWPIILGGNDLVG 152
Query: 225 IAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRH 284
+A TGSGKTL F LP ++ + + + P L++ P+RELA+Q ++ + IR
Sbjct: 153 LAATGSGKTLAFLLPALLKIISLPKRPSY--GATPLVLVMAPTRELAQQIEEVCKTSIR- 209
Query: 285 LKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCM 344
IR A GG+ + +++ GV I++ TPGRL D+L K L+ +YL +
Sbjct: 210 -----GTSIRQLCAYGGLGKIDQSRILRNGVDIVIGTPGRLNDLLRKH--HLSSVQYLVL 262
Query: 345 DEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG- 403
DEADRM+DMGF + ++ +RQTL+FSAT PK+++ A L P+ + VG
Sbjct: 263 DEADRMLDMGFMPQIESLIDQIPKERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQEL 322
Query: 404 AASLTVRQ------DLEPAQPEARTVQLLHCLQKTPPPT--LIFAERKQDVDAVHEYLLL 455
S+ V Q DL Q + ++ + P ++F K D YL
Sbjct: 323 TGSINVTQHIVNIDDLSDLQSDDLIYDEINKILTADPTNTVIVFCNEKYKCDDFQHYLST 382
Query: 456 -KGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDI 514
K V+++ +H GKDQ R ++ FR +L+ATDVA++GLD +++ V NY +P +I
Sbjct: 383 QKNVKSIVLHSGKDQRMRESGLKLFRDHRIRILIATDVAARGLDIPSVKAVFNYRLPGNI 442
Query: 515 ENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFL 563
E+YVHRI + LRDLV +L+ Q++P FL
Sbjct: 443 EDYVHRIGRTGRAGKTGDAWSYVTTQTPN-LRDLVKILQRTNQKIPDFL 490
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 228 bits (558), Expect = 3e-58
Identities = 130/358 (36%), Positives = 199/358 (55%), Gaps = 15/358 (4%)
Query: 170 ILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTG 229
I V+G D P PI+T+ ++ L+ KPT IQ Q +P++++GRD+IGIA TG
Sbjct: 292 ITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTG 351
Query: 230 SGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTG 289
SGKTL F LP+ L+Q +GP +I+ P+RELA QT+ F + L L
Sbjct: 352 SGKTLAFLLPMFRHILDQP---ELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGL-- 406
Query: 290 SPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDML---DKKMVRLNVCRYLCMDE 346
+ GGV +SE + +++G I+V TPGR++D+L K+ L YL +DE
Sbjct: 407 ----KVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDE 462
Query: 347 ADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAAS 406
ADRM D GFE + + + +QT+LFSAT P+ ++ AR L +PV + VG
Sbjct: 463 ADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPVEILVGGKSVVC 522
Query: 407 LTVRQDLEPAQPEARTVQLLHCL--QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVA-I 463
+ Q+ + ++LL L +++F ++++ D + + L+ G +VA +
Sbjct: 523 SDITQNAVICAEHQKFLKLLELLGMYYEEGSSIVFVDKQEKADDIVDQLMRTGYNSVAPL 582
Query: 464 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
HGG DQ +R ++ F+ G VLVAT VA++GLD N+ V+NYD P E+YVHR+
Sbjct: 583 HGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRV 640
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 228 bits (558), Expect = 3e-58
Identities = 160/482 (33%), Positives = 239/482 (49%), Gaps = 24/482 (4%)
Query: 137 IQYEEPIKTSWRPPRCILELPETRHEMIRNKLR-ILVEGDDPPPPIRTFQHMKFPKGILR 195
++YE K + P I ++ +R++L I V+ DD P P+ + M + +
Sbjct: 463 VEYEPFRKDFYTEPAEITQMSAEDVADLRHELDGIKVKPDDVPRPVTKWAQMGLLQQTMD 522
Query: 196 GLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIR 255
G +PT IQ Q +P +GRD+IG+A TGSGKTL F +P+I L+Q P
Sbjct: 523 VFTRVGYARPTAIQAQAIPIAESGRDLIGVAKTGSGKTLAFGIPMIRHVLDQRPLKPA-- 580
Query: 256 NEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKG- 314
+GP GLI+ P+REL+ Q + ++ F+ +T C A GG +S+ + ++++G
Sbjct: 581 -DGPIGLILAPTRELSLQIVNELKPFLNASGIT-----IKC-AYGGQPISDQIAMIKRGG 633
Query: 315 VHIMVATPGRLMDMLDKKMVRLNVCR---YLCMDEADRMIDMGFEEDVRTIFSYFAGQRQ 371
+HI+ AT GRL+D+L R+ R Y+ +DEADRM DMGFE V I + RQ
Sbjct: 634 IHILCATAGRLIDLLQSNSGRVLSFRRITYVVLDEADRMFDMGFEPQVMKILASIRPDRQ 693
Query: 372 TLLFSATMPKKIQNFARSALVRPVTVNVGRAG--AASLTVRQDLEPAQPEARTVQLLHCL 429
T+LFSAT PK + AR AL +P V +G A +T + P E + +LLH L
Sbjct: 694 TILFSATFPKTMAALARKALDKPAEVIIGGRSKVAPEITQHITIVPPSYEKKIAKLLHHL 753
Query: 430 QKT-----PPPTLIFAERKQDVDAVHEYLLLKGVEAV-AIHGGKDQEERSRAVEAFRRGE 483
+T LIF ER++ + + L AV IHG KDQ +R+ A+ F++G
Sbjct: 754 GQTFSDDENAQVLIFTERQETAEDLLSKLFKAKYFAVNTIHGAKDQTDRNEAINEFKQGL 813
Query: 484 KDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHS 543
++L+AT VA++GLD + V N+D P +E+YVHR P
Sbjct: 814 LNILIATSVAARGLDVPGLALVYNFDCPTHLEDYVHRCGRTGRAGNKGLAVTLIENPGQE 873
Query: 544 VLR-DLVHLLREAGQRVPGFLLDMLGEPDVPAPAGQGCSYCAGL-GHRITECPKLEAVQN 601
+V L+E+G VP L M +G Y G G + E A+
Sbjct: 874 RFAVHIVKALKESGAEVPDDLQAMANAFHEKVKSGTEKYYNVGFKGKGLDELDASRALDK 933
Query: 602 KQ 603
K+
Sbjct: 934 KR 935
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 228 bits (557), Expect = 4e-58
Identities = 136/383 (35%), Positives = 197/383 (51%), Gaps = 17/383 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F+ F ++ G+ A G ++PTPIQ Q +P ++ G D+IG+A TG+GKT + LPII
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
L +R L+I P+RELA Q D + L IR C GGV
Sbjct: 62 KMLS--TPRGRVRT-----LVIAPTRELACQISDSFR------SLGQRARIRECSIYGGV 108
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
+ + + ++ GV ++VA PGRL+D + + + + L +DEADRM DMGF+ D+++I
Sbjct: 109 NMDQQIRRLRSGVDVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQSI 168
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
QTLLFSATMP +++ PVTV VG S +V + P + +T
Sbjct: 169 LKCLVQPHQTLLFSATMPPEVRKLTLETQTNPVTVQVGTQSPVS-SVSHSVYPVKSHQKT 227
Query: 423 VQLLHCLQKTPPPT-LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
LL L+ + LIFA K + + + + G ++ G Q R +E FRR
Sbjct: 228 PLLLEILKTVETKSVLIFARTKYGAENLADEISKAGFTTASLQGNLSQNRRHAVMEGFRR 287
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPD 541
G +LVATD+A++GLD +I HVINYDMP+ E+Y HRI D
Sbjct: 288 GNFKILVATDIAARGLDIDHISHVINYDMPDSPEDYTHRIGRTGRFDRTGQAFSLVTGRD 347
Query: 542 HSVLRDLVHLLREAGQ--RVPGF 562
++RD+ LL Q RV GF
Sbjct: 348 GDMVRDIQRLLSSPIQRLRVDGF 370
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 228 bits (557), Expect = 4e-58
Identities = 141/403 (34%), Positives = 213/403 (52%), Gaps = 19/403 (4%)
Query: 173 EGDDPPP---PIRTFQHM--KFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAF 227
EG+ PP P+ TF+ ++P +L + G KP+PIQ Q P +L G DMIGIA
Sbjct: 270 EGETSPPIPNPVWTFEQCFAEYPD-MLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQ 328
Query: 228 TGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKL 287
TG+GKTL F LP ++ Q P G L++ P+RELA Q I+ ++
Sbjct: 329 TGTGKTLAFLLPGMIHTEYQST--PRGTRGGANVLVLAPTRELALQ----IEMEVKKYSF 382
Query: 288 TGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEA 347
G + C+ GG + ++ ++G I++ TPGRL D++ ++ ++ YL +DEA
Sbjct: 383 RGMKAV--CVYGGGNRNMQISDL-ERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEA 439
Query: 348 DRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG-AAS 406
DRM+DMGFE +R + RQT++ SAT P ++ A+S + P+ V VG AA+
Sbjct: 440 DRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAAT 499
Query: 407 LTVRQDLEPAQPEARTVQLLHCLQKTPPPT---LIFAERKQDVDAVHEYLLLKGVEAVAI 463
+V+Q ++ + + + K T +IF RK D + L L G I
Sbjct: 500 HSVKQIIKLMEDDMDKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCI 559
Query: 464 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXX 523
HG +DQ +R +A+ + G +LVATDVAS+GLD +I HVINYD P +IE YVHR+
Sbjct: 560 HGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGR 619
Query: 524 XXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
D ++ ++L+ +L+EA Q VP L +M
Sbjct: 620 TGRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNM 662
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 227 bits (556), Expect = 5e-58
Identities = 131/341 (38%), Positives = 194/341 (56%), Gaps = 13/341 (3%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TF+ ++ +R ++ G PTPIQ +P VL G+D++ A TG+GKT F LPII
Sbjct: 25 TFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIE 84
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
L E K + + L++ P+RELA Q + + ++L L RS GGV
Sbjct: 85 L-LRAEDKP---KRYQVHSLVLTPTRELAAQVEASAKAYTKYLAL------RSDAVFGGV 134
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++ ++ +Q GV I+VATPGRL+D++++KM+R + + L +DEADRM+DMGF D++ +
Sbjct: 135 SIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKV 194
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
Y RQ ++FSAT I+ A L PV + A+ T+ + P AR
Sbjct: 195 IEYLPKNRQNMMFSATFSTPIKKLALGLLNDPVEIKASVQNQAAPTIEHLVHPCD-MARK 253
Query: 423 VQLLHCLQKTP--PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
V LL L KT L+FA K D V + L + + A AIHG K Q R+RA+E F+
Sbjct: 254 VDLLCHLIKTNKWKQVLVFARTKHGADKVVKILCHQHMRASAIHGNKSQGARTRALEGFK 313
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
G+ +LVATD+A++G+D + +VIN D+P E+YVHRI
Sbjct: 314 NGDIKILVATDIAARGIDIHQLPYVINLDLPNVAEDYVHRI 354
>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
magnipapillata (Hydra)
Length = 890
Score = 227 bits (556), Expect = 5e-58
Identities = 140/403 (34%), Positives = 208/403 (51%), Gaps = 15/403 (3%)
Query: 170 ILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTG 229
I + G + P PI++F L+ L+ ++PTPIQ +PA+L RD++ A TG
Sbjct: 438 IELSGTNRPKPIQSFSEANLHPVCLKNLDLAKYKEPTPIQKYAIPAILAKRDVMACAQTG 497
Query: 230 SGKTLVFTLPIIMFCLEQEVKMPFIRNEG---PYGLIICPSRELAKQTHDIIQHFIRHLK 286
SGKT F LPII + + + +G P I+ P+REL ++Q F K
Sbjct: 498 SGKTASFLLPIITNLMNEGLDNIDSNIDGVALPLAAILAPTREL------VVQLFTEARK 551
Query: 287 LTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDE 346
+ + ++ + GGVAV+ + ++ G H++VATPGRL D + + V +YL +DE
Sbjct: 552 FSYNSSLKPVVLYGGVAVAHQADRLRMGCHLLVATPGRLEDFIKRGKVNFQNLKYLILDE 611
Query: 347 ADRMIDMGFEEDVRTIFSYFA----GQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRA 402
AD+MIDMGF + I + G R TL+FSAT P +IQ+ A L + + VGR
Sbjct: 612 ADKMIDMGFGPQIEHIIEFSGMPPKGIRNTLMFSATFPDQIQHLAAQFLNDYLFLTVGRV 671
Query: 403 GAASLTVRQDLEPAQPEARTVQLLHCLQKT-PPPTLIFAERKQDVDAVHEYLLLKGVEAV 461
G V Q + + L + LQ + TL+F E+K+D D + +L K
Sbjct: 672 GGTCTDVTQSVIQVSGTKKRETLENLLQTSGTDQTLVFVEKKRDADFLANFLSQKNFPPT 731
Query: 462 AIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ + +E+R A+ FR G +LVAT VA++GLD +++HVINYD+P+D YVHRI
Sbjct: 732 ILFADRTREKRESALRDFRNGIAPILVATAVAARGLDINDVKHVINYDLPKDANEYVHRI 791
Query: 522 XXXXXXXXXXXXXXXXXXP-DHSVLRDLVHLLREAGQRVPGFL 563
D S+ R LV LL +A Q VP +L
Sbjct: 792 GRTGRIGNKGKATSFFDLDRDGSLARSLVKLLSDAEQDVPDWL 834
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:
VASA RNA helicase - Moina macrocopa
Length = 843
Score = 227 bits (556), Expect = 5e-58
Identities = 130/356 (36%), Positives = 199/356 (55%), Gaps = 12/356 (3%)
Query: 172 VEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSG 231
V G++ P I +F+ +L+ ++A G KPTP+Q + VL RD+I A TGSG
Sbjct: 399 VTGNNVPNYITSFETAGLRDLVLQNIKASGYTKPTPVQKGAIAVVLARRDLIASAVTGSG 458
Query: 232 KTLVFTLPIIMFCLEQEVK-MPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGS 290
KT F +P++ LE++V+ P + P +II P+RELA Q H + F + L
Sbjct: 459 KTAAFLVPVVNILLEKQVQGAPSGEVQKPEVVIISPTRELAIQIHREARKFSHNSVL--- 515
Query: 291 PEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRM 350
+S + GG VS + G +I+V TPGRL D +DK + + ++ +DEADRM
Sbjct: 516 ---KSVIVYGGTQVSHQKSSLMNGCNILVGTPGRLKDFVDKGFIDFSNVQFFILDEADRM 572
Query: 351 IDMGFEEDVRTIFSYFA----GQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAAS 406
+DMGF D+ I + G+R TL+FSAT P +Q A L V V G G +
Sbjct: 573 LDMGFGSDIEFIAQHPTMTPVGRRVTLMFSATFPDDVQKIAGKYLHDYVFVTTGNIGGMN 632
Query: 407 LTVRQDLEPAQPEARTVQLLHCLQKTPPP-TLIFAERKQDVDAVHEYLLLKGVEAVAIHG 465
V Q+ Q + + +L+ L+ ++F E K+ D + +L +A +IHG
Sbjct: 633 PDVCQEFHEVQRQDKRNKLVEILRDLGNSRVIVFVESKKTADFIAAFLANTQFQATSIHG 692
Query: 466 GKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ Q +R +A+ F+ G++++LVAT+VA++GLD A +++VINYD+P DIE YVHRI
Sbjct: 693 DRLQSQREQALREFKSGQRNILVATNVAARGLDIAGVEYVINYDLPADIEEYVHRI 748
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 227 bits (555), Expect = 7e-58
Identities = 127/340 (37%), Positives = 190/340 (55%), Gaps = 12/340 (3%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F + K +L+ + G ++PTP+Q +P+VL RD+I +A TG+GKT F LP+I
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
R P LI+ P+RELA Q + + + ++ KL+ S L IGGV
Sbjct: 62 ILAHGRC-----RARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMS------LLIGGV 110
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++E ++KGV +++ATPGRL+D+ ++ + L+ C L +DEADRM+DMGF D+ TI
Sbjct: 111 PMAEQQAALEKGVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETI 170
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
+ RQTLLFSATMP I+ A L P + + R A+ + Q L P ++
Sbjct: 171 CTKLPTSRQTLLFSATMPPAIKKLADRFLSNPKQIEISRPATANTLIDQRLIEVSPRSKK 230
Query: 423 VQLLHCLQKTPPPT-LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
+L L+ T +IF RK V + L +G IHG Q ER +E F+
Sbjct: 231 KKLCDMLRAEKDHTAIIFCNRKTTVRQLATTLEQQGFSVGQIHGDMSQPERGSELERFKN 290
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
G+ VLVA+D+A++GLD I HV N+D+P ++Y+HRI
Sbjct: 291 GQISVLVASDIAARGLDVKGISHVFNFDVPTHPDDYIHRI 330
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 227 bits (554), Expect = 9e-58
Identities = 124/342 (36%), Positives = 190/342 (55%), Gaps = 15/342 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + L+ + G TPIQ +P L G+D++GIA TG+GKT FTLP+I
Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDK 63
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
+ K P L+I P+RELA Q + + + KL+ + L IGGV+
Sbjct: 64 LMNGRAKARM-----PRALVIAPTRELADQVASSFEKYAKGTKLSWA------LLIGGVS 112
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+ + + +GV +++ATPGRL+D ++ + + ++L +DEADRM+DMGF D+ IF
Sbjct: 113 FGDQEKKLDRGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIF 172
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQ---DLEPAQPEA 420
++QTL FSATMP +I + L PV + R + + Q + + P+A
Sbjct: 173 KMTPPKKQTLFFSATMPPEITRLTKQFLKDPVRIEASRPATTNENITQLMVKVPSSDPKA 232
Query: 421 RTVQLLHCLQKTPPPT-LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAF 479
+ + L ++K T ++F RK +VD V + L G +A AIHG DQ +R++ + AF
Sbjct: 233 KRLALRALIEKAQIETGIVFCNRKTEVDVVAKSLKSHGFDAAAIHGDLDQSQRTKTLAAF 292
Query: 480 RRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
R G +LVA+DVA++GLD + HV NYD+P ++YVHRI
Sbjct: 293 RDGSLKILVASDVAARGLDIPAVSHVFNYDVPHHADDYVHRI 334
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 227 bits (554), Expect = 9e-58
Identities = 143/404 (35%), Positives = 211/404 (52%), Gaps = 20/404 (4%)
Query: 170 ILVEGDD--PPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAF 227
I+VE +D P P ++ +FP + + + K +PTPIQ P +++G D+IGIA
Sbjct: 57 IVVEQNDIQVPQPFIEWKDCQFPNQLNKRISLKAYNRPTPIQASVFPIIMSGHDLIGIAQ 116
Query: 228 TGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKL 287
TGSGKT+ + LP ++ Q K GP LI+ P+RELA Q + I +F +
Sbjct: 117 TGSGKTIAYLLPGLVHIESQRKK------GGPMMLILVPTRELAMQIQEHISYFSEAYNM 170
Query: 288 TGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEA 347
+ C+ GG + + I+VATPGRL+D LD ++ L+ YL +DEA
Sbjct: 171 NSA-----CI-YGGADKRPQEMALARDPDIVVATPGRLIDFLDAQVTNLHNVTYLVLDEA 224
Query: 348 DRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSAL-VRPVTVNVG-RAGAA 405
DRM+DMGFE+ VR I SY RQT+ FSAT PK +QN A P+ + +G +
Sbjct: 225 DRMLDMGFEQQVRKIDSYIREDRQTVFFSATWPKTVQNLACDLCHNEPINLYIGSQEVTI 284
Query: 406 SLTVRQDLEPAQPEARTVQLLHCLQK--TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAI 463
+ + Q+ + +LL+ L++ LIF E K+D + + YL G +++
Sbjct: 285 NKNITQETICLYQNEKQEELLYILEELSNKDKVLIFVETKKDCEDLASYLSEHGFFCMSL 344
Query: 464 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI-- 521
HG K Q++R ++ F+ + +L ATDVAS+GLD +I VINYD P I+NYVHRI
Sbjct: 345 HGDKTQQQRDYVMKEFKASKCKLLCATDVASRGLDVRDISLVINYDFPNQIDNYVHRIGR 404
Query: 522 XXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLD 565
D V + LV LL+++ Q V L D
Sbjct: 405 TGRAGDKGRSITMITLDAMDPRVAKQLVDLLKDSEQVVNDDLYD 448
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 225 bits (550), Expect = 3e-57
Identities = 151/415 (36%), Positives = 212/415 (51%), Gaps = 35/415 (8%)
Query: 178 PPPIRTFQHMK-FPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVF 236
P PI F+ ++ FP+ ++ L G + PT IQ QG L G D+IGIA TGSGKTL F
Sbjct: 129 PDPIMRFEDVQCFPQMLMDLLLKAGFKGPTAIQAQGWSIALTGHDLIGIAQTGSGKTLAF 188
Query: 237 TLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSC 296
LP I+ L Q R+ P LI+ P+REL Q +D Q F GS +C
Sbjct: 189 LLPAIVHILAQ------ARSHDPKCLILAPTRELTLQIYDQFQKF-----SVGSQLYAAC 237
Query: 297 LAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFE 356
L GG ++KG I++A PGRL+D+LD+ L +L +DEADRM+DMGFE
Sbjct: 238 L-YGGQDRYIQKSQLRKGPQILIACPGRLIDLLDQGCTTLKQVSFLVLDEADRMLDMGFE 296
Query: 357 EDVRTIFSYFAGQRQTLLFSATMPKKIQNFARS-ALVRPVTVNVGRAGAAS-------LT 408
+R I QRQT+LFSAT PK++Q A PV + +G S +
Sbjct: 297 PQIRKIVDQIRPQRQTMLFSATWPKEVQKLALDFCKQEPVHIQIGNVELTSNRMIKQIVY 356
Query: 409 VRQDLEPAQPEARTVQ------------LLHCLQK-TPPPTLIFAERKQDVDAVHEYLLL 455
V + ++ Q +T+ LL+ L+ LIF K+ D + + L
Sbjct: 357 VMKAIDKNQRYNQTIDGANIYTRSSISLLLYLLKDIAHKKILIFCSTKKGCDQLQKTLDR 416
Query: 456 KGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIE 515
+G+ +A+HG K Q ER + FR G L+ATDVAS+GLD +I+ V+NYDMP+ IE
Sbjct: 417 EGIRCLALHGDKKQTERDYVMSHFRNGRSTALIATDVASRGLDIKDIEVVVNYDMPKVIE 476
Query: 516 NYVHRI-XXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGE 569
+YVHRI D + +DLV +LRE+ +P L ++ +
Sbjct: 477 DYVHRIGRTGRAGAIGQSISFFASDEDVRMAKDLVEILRESQNDIPYELRSLIDQ 531
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 225 bits (550), Expect = 3e-57
Identities = 137/395 (34%), Positives = 207/395 (52%), Gaps = 17/395 (4%)
Query: 178 PPPIRTFQH--MKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLV 235
P P TF +P+ ++ ++ G QKPTPIQ Q P VL G D+IG+A TG+GKTL
Sbjct: 237 PNPTCTFDDAFQCYPE-VMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLC 295
Query: 236 FTLP-IIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIR 294
+ +P I L+ +K RN P L++ P+RELA Q + +R
Sbjct: 296 YLMPGFIHLVLQPSLKGQ--RNR-PGMLVLTPTRELALQVEGECCKY-------SYKGLR 345
Query: 295 SCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMG 354
S GG E +E ++KGV I++ATPGRL D+ V L YL +DEAD+M+DMG
Sbjct: 346 SVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMG 405
Query: 355 FEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLT-VRQDL 413
FE + I RQT++ SAT P + A+S L P+ V VG +++ V+Q++
Sbjct: 406 FEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNI 465
Query: 414 EPAQPEARTVQLLHCLQK--TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEE 471
E + + LQ + ++F RK D + L+L + ++HG ++Q +
Sbjct: 466 IVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRD 525
Query: 472 RSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXX 531
R +A+E F+ G+ +L+ATD+AS+GLD ++ HV N+D P +IE YVHRI
Sbjct: 526 REKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTG 585
Query: 532 XXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
D V +L+++L A Q +P L+ M
Sbjct: 586 VSITTLTRNDWRVASELINILERANQSIPEELVSM 620
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 225 bits (549), Expect = 4e-57
Identities = 134/444 (30%), Positives = 228/444 (51%), Gaps = 18/444 (4%)
Query: 135 KGIQYEEPIKTSWRPPRCILELPETRHEMIRN-KLR-ILVEGDDPPPPIRTFQHMKFPKG 192
K IQYE K + I +L + + IR +L +V+G + P PIRT+
Sbjct: 91 KNIQYEPIHKALYVEVPDIKKLKKEEVKEIRRIELEGCIVKGKNCPKPIRTWSECGINPI 150
Query: 193 ILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMP 252
+ ++A +KP+P+Q Q +P +++G D I A TGSGKTL +T+P+I + Q P
Sbjct: 151 TMDVIKALKYEKPSPVQRQAIPVIMSGYDAIVCAKTGSGKTLAYTIPLIKHVMAQR---P 207
Query: 253 FIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQ 312
+ EGP G++ P RELA+Q + I F ++L IRS GG +S + ++
Sbjct: 208 LSKGEGPIGIVFAPIRELAEQINTEINKFGKYL------NIRSVAVFGGTGISNQIGALK 261
Query: 313 KGVHIMVATPGRLMDML---DKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQ 369
+G I+V TPGR++D+L + ++ L ++ +DEADRM DMGF ++ I
Sbjct: 262 RGTEIVVCTPGRMIDILVTNNGRITNLRRVTFVVLDEADRMFDMGFGPQIKRIIEGIRPD 321
Query: 370 RQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCL 429
+Q ++FSAT P ++ AR L +P+ + G S T+ Q +E + + + +L+ +
Sbjct: 322 KQIVMFSATFPISVEQHAREFLKKPIEIICGGRSQVSNTIEQIVEVIETKKKIERLISIV 381
Query: 430 ---QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG-EKD 485
+IF E +++ D +++ L+ + + + +HGG DQ +R ++ F+ G +
Sbjct: 382 LEQNNKGGRIIIFTETQKNCDELYQNLMERNINCLLLHGGIDQIDRQNTIQEFKSGIGRT 441
Query: 486 VLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVL 545
+L+ T + ++GLD ++ VINYD P +E+YVHR+ +
Sbjct: 442 ILITTSLCARGLDVKGLELVINYDCPNHLEDYVHRVGRTGRAGKRGKAITFITKEEERYS 501
Query: 546 RDLVHLLREAGQRVPGFLLDMLGE 569
D+V L +G + L DM E
Sbjct: 502 EDIVKALTLSGGSISKELNDMYEE 525
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 225 bits (549), Expect = 4e-57
Identities = 137/394 (34%), Positives = 210/394 (53%), Gaps = 24/394 (6%)
Query: 180 PIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLP 239
P+ +F ++ I E KPTPIQ P +L+G+D++G+A TGSGKT F +P
Sbjct: 112 PLLSFDYLSLDSSIQA--EISKFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVP 169
Query: 240 IIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAI 299
I + + K G L+I P+RELA Q +D + + LT ++ C
Sbjct: 170 AISHLMNDQKK------RGIQVLVISPTRELASQIYDNL------IVLTDKVGMQCCCVY 217
Query: 300 GGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDV 359
GGV E + K ++VATPGRL+D+L + V L+ YL +DEADRM++ GFEED+
Sbjct: 218 GGVPKDE-QRIQLKKSQVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDI 276
Query: 360 RTIFSYF-AGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG--AASLTVRQDLEPA 416
+ I A +RQTL+F+AT PK+++ A + + P+ V++G A+ + Q +E
Sbjct: 277 KNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVV 336
Query: 417 QPEARTVQLLHCLQK--TPPP----TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQE 470
P + +LL L+K + P LIFA K++ V L G AIHG Q+
Sbjct: 337 DPRGKERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQ 396
Query: 471 ERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXX 530
+R++A+ F+ G+ ++L+ATDVA++GLD N++ VIN P +E+YVHRI
Sbjct: 397 QRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQT 456
Query: 531 XXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLL 564
+ + LV++L A Q VP L+
Sbjct: 457 GTAHTLFTEQEKHLAGGLVNVLNGANQPVPEDLI 490
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 223 bits (546), Expect = 8e-57
Identities = 133/371 (35%), Positives = 195/371 (52%), Gaps = 15/371 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + + +L+ L+ KG PTPIQ Q +P VL GRD++GIA TG+GKT F LP I
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
E + ++PF + L++ P+REL Q I + +++S +GG +
Sbjct: 64 LREADNRIPF---KSCRMLVLAPTRELVSQ----IAASAKDYGALAGLKVQSI--VGGTS 114
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
V++ + +G I++ATPGRL+D++D+K L L +DEAD+M+D+GF +R I
Sbjct: 115 VNKDRNKLHRGTDILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHALRRIS 174
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
+RQTL FSATMPK I+ PV V+V + + Q L Q + +
Sbjct: 175 QLVPKERQTLFFSATMPKAIKELVSGYCNNPVQVSVTPESTTAERIDQYLFMVQQDEKQS 234
Query: 424 QL---LHCLQKTPPP---TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVE 477
L L K P LIF K D V + L G+ A AIHG K Q +R RA++
Sbjct: 235 LLELILSGRHKVPGEFERILIFTRTKHGADRVVKKLSRAGIPANAIHGNKSQPQRQRALD 294
Query: 478 AFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXX 537
FRRG+ +LVATDVA++G+D + HV+NY++P E YVHRI
Sbjct: 295 EFRRGKTMILVATDVAARGIDIPGVSHVLNYELPNVPEQYVHRIGRTARAGKDGVAIAFC 354
Query: 538 XXPDHSVLRDL 548
+ + L+D+
Sbjct: 355 AEDERAYLKDI 365
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 223 bits (546), Expect = 8e-57
Identities = 135/432 (31%), Positives = 226/432 (52%), Gaps = 19/432 (4%)
Query: 140 EEPIKTSW--RPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGL 197
E P+ S+ + IL L E + E ++ +L ILV+G + PI F+H P+ + L
Sbjct: 159 ESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNL 218
Query: 198 EAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNE 257
+ G + PTPIQ+Q +P L GRD++ A TGSGKT F LP+IM L ++
Sbjct: 219 KKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRAL--------FESK 270
Query: 258 GPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHI 317
P LI+ P+RELA Q I+ + L ++G P +++ L +GG+ + + +Q+ V +
Sbjct: 271 TPSALILTPTRELAIQ----IERQAKEL-MSGLPRMKTVLLVGGLPLPPQLYRLQQHVKV 325
Query: 318 MVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSA 377
++ATPGRL+D++ + V L + + +DEAD M+ MGF++ V I QT+L SA
Sbjct: 326 IIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSA 385
Query: 378 TMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDL---EPAQPEARTVQLLHCLQKTPP 434
T+P I+ A L PV + G VRQ + E + + ++L+ + P
Sbjct: 386 TIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKLFEILNDKKLFKP 445
Query: 435 PTLIFAERKQDVDAVHEYL-LLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVA 493
P L+F + K D + E + + G+++++IH K Q ER ++ G+ +V+V+T V
Sbjct: 446 PVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEGDYEVVVSTGVL 505
Query: 494 SKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLR 553
+GLD +++ V+N+DMP ++ YVH+I + D+ ++
Sbjct: 506 GRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAITFINNNSKRLFWDIAKRVK 565
Query: 554 EAGQRVPGFLLD 565
G +P LL+
Sbjct: 566 PTGSILPPQLLN 577
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 223 bits (545), Expect = 1e-56
Identities = 129/404 (31%), Positives = 204/404 (50%), Gaps = 15/404 (3%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+FQ IL+ ++ G +PTPIQ + +P ++ + ++ A TG+GKT F LPI+
Sbjct: 2 SFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPIL- 60
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
++ GP LI+ P+RELA Q D I+ + R+L+ I S GG+
Sbjct: 61 ----DKLTKNRSEGRGPRVLIVSPTRELATQITDSIKKYSRYLR------INSITITGGI 110
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
+ + K + I+VATPGRL+D+ +K + + +DEADRM+DMGF D+R I
Sbjct: 111 SYGLQNRMFSKPIDILVATPGRLLDLYQQKKINFKGLEVMILDEADRMLDMGFVPDIRKI 170
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
++ + ++Q L+FSAT IQ A+ L PVT+++ + ++Q + A ++
Sbjct: 171 YNATSKKQQMLMFSATFDPPIQKIAQEFLTNPVTISIKPDVSGHKNIKQLIYFADNQSHK 230
Query: 423 VQLLHCLQKTPPPT--LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
Q+L K T +IF K+ D + + L ++ A+HG Q R++ + F+
Sbjct: 231 QQMLDHFIKNDEVTQAIIFTATKRMADQLSDQLYHSDIKTSALHGDMSQGSRTKTINRFK 290
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXP 540
R E +LVATD+AS+G+D NI HV NYDMP E+Y+HRI
Sbjct: 291 RNETKILVATDLASRGIDVKNISHVFNYDMPRFAEDYIHRIGRTGRANNKGIAISLVSPT 350
Query: 541 DHSVLRDLVHL--LREAGQRVPGFLLDMLGEPDVPAPAGQGCSY 582
D LR + L+ +PG +L E P +G S+
Sbjct: 351 DREFLRKIERFTNLKIEIASIPGMEATILKEAKAPKRKSKGRSF 394
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 223 bits (545), Expect = 1e-56
Identities = 128/379 (33%), Positives = 206/379 (54%), Gaps = 15/379 (3%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TF+ + + +L+ L+ G ++P+PIQ Q +PA+L G+D+IG A TG+GKT F +PI+
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIV- 65
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
E +P R L++ P+RELA Q + I RH + +++ GG
Sbjct: 66 -----ERLVPGQR--AVQALVLTPTRELAIQVAEEITKIGRHAR------VKTIAIYGGQ 112
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++ + ++ GV +++ TPGR++D L + + L+ R + +DEAD M+DMGF ED+ I
Sbjct: 113 SIERQIRSLRFGVDVVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLDMGFIEDIEKI 172
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
+RQTLLFSATMP +I+ A + P+T++V + Q +P +T
Sbjct: 173 LQNTPAERQTLLFSATMPPEIRRLAGRYMRDPITISVTPQQLTVPQIDQYFCEVRPSFKT 232
Query: 423 VQLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L L + + F K+ VD + E L +G +A IHG +Q +R+R + F+
Sbjct: 233 EALTRILDIENVERGICFCRTKKGVDELVEALQARGYQAEGIHGDMNQAQRNRVMSRFKE 292
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPD 541
G ++LVATDVA++GLD +++ HV NYD+P+D E+YVHRI +
Sbjct: 293 GYIELLVATDVAARGLDISDVTHVFNYDIPQDPESYVHRIGRTGRAGRTGTAITLVTPRE 352
Query: 542 HSVLRDLVHLLREAGQRVP 560
LR + +++ QR P
Sbjct: 353 FPQLRLIERVIKARLQRRP 371
>UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 620
Score = 223 bits (545), Expect = 1e-56
Identities = 133/416 (31%), Positives = 220/416 (52%), Gaps = 15/416 (3%)
Query: 153 ILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQG 212
I L + + +R+K+ I V+G+ P+ F H F + + + L G PTPIQ+Q
Sbjct: 167 IAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPTPIQMQV 226
Query: 213 MPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKM----PFIRNEGPYGLIICPSR 268
+P +L+GRD++ A TGSGKT F LP+I K+ P +R YGLI+ P+R
Sbjct: 227 LPVLLSGRDVMVCASTGSGKTASFLLPMISRIHHITGKLLPSSPEVRFI--YGLILAPTR 284
Query: 269 ELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDM 328
EL Q + F+ G +R+ L IGGV V + ++ GV ++VATPGR++++
Sbjct: 285 ELCMQIEKQTKEFVH-----GMTNMRTALLIGGVPVPPQLHRLKMGVQVIVATPGRMVEI 339
Query: 329 LDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFAR 388
+ ++ V L +DE D M+ +GFE+ V+ I + +RQT+LFSAT+P I+ A
Sbjct: 340 ISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQTMLFSATIPPSIEAMAS 399
Query: 389 SALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKT---PPPTLIFAERKQD 445
L PV ++ G + V+Q + + +++ QL L+ + PP ++F E K
Sbjct: 400 RLLNAPVFISAGSPSLPTKAVKQLILWVEEKSKKKQLFSILKDSRHFNPPAVVFVESKLG 459
Query: 446 VDAVHEYL-LLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQH 504
D + E + + ++ +++HG K Q ER++ ++ F GE ++V+T V +G+D NI+
Sbjct: 460 ADMLAEAVSKVCHIKCLSMHGDKPQAERAQILQDFLAGECPLVVSTAVLGRGVDLLNIRQ 519
Query: 505 VINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVP 560
VIN+DMP E YVH+I + L++ L+ G ++P
Sbjct: 520 VINFDMPPTYEEYVHQIGRAGRLGATGWSISFINNASKGLFLQLINKLQPMGVKLP 575
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 223 bits (544), Expect = 1e-56
Identities = 138/403 (34%), Positives = 207/403 (51%), Gaps = 28/403 (6%)
Query: 180 PIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLP 239
P TF KFP + + L+A+G PTPIQ + P +L G+D++ IA TGSGKT F LP
Sbjct: 84 PYVTFDDAKFPAALRKALKAQGYDAPTPIQAEAWPILLKGKDVVAIAKTGSGKTCGFLLP 143
Query: 240 IIM-FCLEQEVKMPFIRN-EG--------PYGLIICPSRELAKQTHDIIQHFIRHLKLTG 289
+ E K P ++ +G P +++ P+RELA Q HD K
Sbjct: 144 ALAKIVAEGTQKAPEMQLVDGRWRPGAVTPSVIVLAPTRELAIQIHD------ECAKFCP 197
Query: 290 SPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKM-----VRLNVCRYLCM 344
+ RS + GG A + + ++ G ++VATPGRL D L+ V Y+ +
Sbjct: 198 AAGCRSAVLYGGAAKGDQLRALRSGADVVVATPGRLNDFLEPPPGFTAPVSAVKAAYVVL 257
Query: 345 DEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG- 403
DEADRM+DMGFE ++ IF RQT++F+AT PK +Q A + +P+ + +G G
Sbjct: 258 DEADRMLDMGFEPQIKKIFKLCPSARQTVMFTATWPKGVQKIADAFTTKPIHIQIGSGGD 317
Query: 404 --AASLTVRQDLEPAQPEARTVQLLHCLQKT---PPPTLIFAERKQDVDAVHEYLLLKGV 458
A+ ++ Q +E + E + + + L+K ++FA K+ D + L G
Sbjct: 318 KLTANKSITQTVEVVEEEEKFDRCVAILKKELGKNETCIMFAGTKRRCDFLDRRLKQVGF 377
Query: 459 EAV-AIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENY 517
+ +IHG KDQ ER ++ FRRG ++LVATDVA++GLD + VI YD P +E+Y
Sbjct: 378 SSAGSIHGDKDQYEREMVLDNFRRGRGNILVATDVAARGLDIPGVAAVIVYDFPLQVEDY 437
Query: 518 VHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVP 560
VHRI + +L+ +L+ AGQ VP
Sbjct: 438 VHRIGRTGRAGKDGKAFTFFTKDNRGAANELIEILQGAGQTVP 480
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 222 bits (543), Expect = 2e-56
Identities = 128/378 (33%), Positives = 202/378 (53%), Gaps = 16/378 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + + ++ L I PTP+Q + +P VL G+D++ A TG+GKT F LPII
Sbjct: 9 FADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQA 68
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
+++ RN P+ LI+ P+RELA+Q D + + H ++R GG +
Sbjct: 69 VQQKK------RNGTPHALILVPTRELAQQVFDNLTQYAEHT------DLRIVCVYGGTS 116
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+ +++G I++ATPGRL+D L V ++ L +DEADRM+DMGF D++ I
Sbjct: 117 IGVQKNKLEEGADILIATPGRLLDHLFNGNVNISKTGVLVLDEADRMLDMGFWPDLQRIL 176
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
+Q +LFSAT K+I+ A + PV V V A + TV+Q + P + +
Sbjct: 177 RRLPNDKQIMLFSATFEKRIKTIAYKLMDSPVEVEVSPANTTAETVKQMVYPVDKKRKRE 236
Query: 424 QLLHCL-QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG 482
L + + + L+F + KQ D + + L L G++AV+I+G K Q R RA++ F++G
Sbjct: 237 LLAYLIGSRNWQQVLVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQG 296
Query: 483 EKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDH 542
+ L+ATDVA++GLD ++ V+N+DMP E+YVHRI +
Sbjct: 297 KVRALIATDVAARGLDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDEE 356
Query: 543 SVLRDLVHLLREAGQRVP 560
+LR + LL QR+P
Sbjct: 357 YLLRAIETLL---DQRLP 371
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 222 bits (543), Expect = 2e-56
Identities = 127/345 (36%), Positives = 187/345 (54%), Gaps = 15/345 (4%)
Query: 178 PPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFT 237
PP F + + + G +PTPIQ Q +PAVL GRD+ G A TG+GKT F
Sbjct: 129 PPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFA 188
Query: 238 LPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCL 297
LPI+ E ++ L++ P+RELA Q + Q + ++ LT + +
Sbjct: 189 LPILHKLGAHERRLRC--------LVLEPTRELALQVEEAFQKYSKYTDLTAT------V 234
Query: 298 AIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEE 357
GGV + E +Q+GV ++ ATPGRL+D +++ + L L +DE DRM+DMGF
Sbjct: 235 VYGGVGYGKQREDLQRGVDVVAATPGRLLDHIEQGTMTLADVEILVLDEVDRMLDMGFLP 294
Query: 358 DVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQ 417
DV+ I RQTL FSAT+P ++ A AL PV + +G+ + + T+ P
Sbjct: 295 DVKRIVQQCPQARQTLFFSATLPPELAQLASWALRDPVEIKIGQRRSPAETISHAFYPVV 354
Query: 418 PEARTVQLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAV 476
+ L+ L +T +IF K D + L +G IH ++Q ER A+
Sbjct: 355 ASQKFDLLIDLLSRTEFKSVIIFTRTKMGADRIAHRLQREGHTVGVIHSDRNQRERVEAL 414
Query: 477 EAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
E F+ G+ +VLVATD+A++GLD A + HVINYD+PE+ E+YVHRI
Sbjct: 415 EGFKSGKFEVLVATDIAARGLDIAGVSHVINYDVPENPEDYVHRI 459
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 222 bits (543), Expect = 2e-56
Identities = 143/393 (36%), Positives = 198/393 (50%), Gaps = 14/393 (3%)
Query: 175 DDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTL 234
+D P R Q LR L G + PT +Q Q +P + +G D + +A TGSGKTL
Sbjct: 48 EDVAPISRFGQGGALDVDCLRALRRMGYESPTAVQAQCLPVIWSGHDALVMAKTGSGKTL 107
Query: 235 VFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIR 294
F LP Q P + EGP L++ P+RELA Q + F + G R
Sbjct: 108 AFLLPAYAQISRQR---PLTKREGPIALVLAPTRELASQIANEAHKFTKF----GVSGAR 160
Query: 295 SCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLD-KKMVRLNVCRYLCMDEADRMIDM 353
C GGV+ + + ++ G I+VATPGRL+D+L K L YL +DEADRM+DM
Sbjct: 161 CCAIFGGVSKRDQFKKLRAGAEIVVATPGRLVDVLCMKNSTNLRRVTYLALDEADRMLDM 220
Query: 354 GFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRP-VTVNVGRAGAASLTVRQD 412
GFE+ VR+I RQ ++FSATMP +Q AR L R VTV++G G A+ VRQ
Sbjct: 221 GFEKIVRSICQAVRPDRQCVMFSATMPAAMQRLARDVLARDAVTVSIGNVGGANEDVRQV 280
Query: 413 LEPAQPEARTVQ-LLHCLQKTPPP--TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQ 469
+ + +AR L L ++F K V+ + L +G++AVA+HG DQ
Sbjct: 281 VYVFEDDARRAAWLFENLGDAVDEGQAIVFVNHKSSVEELVNELATRGIKAVALHGDLDQ 340
Query: 470 EERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXX 529
+R A++AF+ VLVATDVA++GLD I+ V+N+ D+ +VHRI
Sbjct: 341 AQRQFAMKAFKSEHAHVLVATDVAARGLDVEAIKTVVNFHPARDMSTHVHRIGRTGRAGA 400
Query: 530 XXXXXXXXXXPDHSV--LRDLVHLLREAGQRVP 560
S + L L AGQ VP
Sbjct: 401 LDGRAYTLFTARDSAKFAQQLEQNLEAAGQPVP 433
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 222 bits (542), Expect = 3e-56
Identities = 125/346 (36%), Positives = 188/346 (54%), Gaps = 12/346 (3%)
Query: 178 PPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFT 237
P + F + +LR L+ G KPTPIQ Q +P +L GRD++G+A TG+GKT F
Sbjct: 3 PTSAQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFA 62
Query: 238 LPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCL 297
LP++ P G L++ P+REL Q D + F RH +R
Sbjct: 63 LPLLHRLAATPRPAP---KNGARVLVLAPTRELVSQIADGFESFSRH------QPVRVTT 113
Query: 298 AIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEE 357
GGV+ ++ +++GV I+VA PGRL+D++++ + L+ L +DEAD+M+DMGF +
Sbjct: 114 IFGGVSQVHQVKALEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMGFAK 173
Query: 358 DVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQ 417
+ I + R T+LFSATMPK I S L P V + + + Q +
Sbjct: 174 PIERIVATLPEDRHTVLFSATMPKSIAALVESLLRNPAKVEIAPPSSTVDRIAQSVMFLN 233
Query: 418 PEARTVQLLHCLQKTP--PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRA 475
+ LL L +TP ++F +K + V +L G+ A A+HG + Q +R RA
Sbjct: 234 ASDKKAALLAQL-RTPGIGQAVVFTLQKNIANDVCTFLTESGITAEALHGNRSQGQRERA 292
Query: 476 VEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ AFR G+ VLVATD+A++G+D + HVIN+D+P E+YVHRI
Sbjct: 293 LNAFREGDVQVLVATDIAARGIDVDTVTHVINHDLPSLPESYVHRI 338
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 222 bits (542), Expect = 3e-56
Identities = 132/350 (37%), Positives = 192/350 (54%), Gaps = 16/350 (4%)
Query: 173 EGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGK 232
E DD P F + + + R + G PTPIQ Q +P VL GRD++G A TG+GK
Sbjct: 218 EVDDRP----LFADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGK 273
Query: 233 TLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPE 292
T FTLP++ ++ R P LI+ P+RELA Q + + ++LKL +
Sbjct: 274 TASFTLPMMDILSDRRA-----RARMPRSLILEPTRELALQVAENFVKYGQYLKLNHA-- 326
Query: 293 IRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMID 352
L IGG ++++ +V+ KGV +++ATPGRL+D+ D+ + L R L +DEADRM+D
Sbjct: 327 ----LLIGGESMNDQRDVLSKGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLD 382
Query: 353 MGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQD 412
MGF DV I S RQTL FSATM +I+ A + L P + V + + + T+
Sbjct: 383 MGFIPDVERIVSLLPHNRQTLFFSATMAPEIRRLADAFLQNPKEITVAKPASVATTITSG 442
Query: 413 LEPAQPEARTVQLLHCL-QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEE 471
L + L H L Q+ LIF RK+DVD + + L+ G A +HG Q
Sbjct: 443 LALVGEMDKRKALRHLLRQEKVQNALIFCNRKRDVDILTKSLVKHGFAAGPLHGDLAQSL 502
Query: 472 RSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
R +E F+ G +LV +DVA++G+D + HV N+D+P E+YVHRI
Sbjct: 503 RFSTLEKFKAGSLQLLVCSDVAARGIDIGGLSHVFNFDVPIHAEDYVHRI 552
>UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11;
Plasmodium|Rep: DEAD-box helicase 11 - Plasmodium
falciparum
Length = 941
Score = 222 bits (542), Expect = 3e-56
Identities = 144/428 (33%), Positives = 227/428 (53%), Gaps = 44/428 (10%)
Query: 193 ILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCL------- 245
+L ++ K TPIQ + ++N D+IG+A TGSGKT + LPII L
Sbjct: 373 LLSNIKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDPPKH 432
Query: 246 ---EQEVKMP---FIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAI 299
EQ K F R P LI+ P+RELA +Q F K I+ +
Sbjct: 433 TYYEQNNKTSNYYFNRVCLPICLILAPTRELA------VQIFYDAKKFCFETGIKPVVLY 486
Query: 300 GGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDV 359
GG + + + KG I+VATPGRL D+L+K ++L + +L +DEADRM+DMGF +
Sbjct: 487 GGNNIKTQLSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQI 546
Query: 360 RTIFSYF--AG----------------------QRQTLLFSATMPKKIQNFARSALVRPV 395
R+I + + G +RQT++FSAT K+IQ A+ L +
Sbjct: 547 RSIVNDYDMPGNDNDVHTSENKVEYKKYCNDIIKRQTIMFSATFRKEIQVLAKEYLCKYT 606
Query: 396 TVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCL-QKTPPPTLIFAERKQDVDAVHEYLL 454
+ VG+ G+ + ++Q+L + E + LL+ L + T++F E K+ D + +L
Sbjct: 607 FLLVGKVGSTNEYIKQNLVFVEEENKCNYLLNLLAENNNGLTILFVETKRKADIIERFLS 666
Query: 455 LKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDI 514
+ + AV IHG K Q+ER RA++ F+RG K++LVATDVA++GLD +NI+HVIN+D+P +I
Sbjct: 667 NQKLNAVCIHGDKSQDERERALKLFKRGIKNILVATDVAARGLDISNIKHVINFDLPSNI 726
Query: 515 ENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGEPDVPA 574
++Y+HRI + ++ +DL+ L E Q++P + L+++ + A
Sbjct: 727 DDYIHRIGRTGRAGNIGIATSFVNEDNKNIFKDLLATLEECNQQIPRWFLNLVMKHTASA 786
Query: 575 PAGQGCSY 582
A + Y
Sbjct: 787 RANRNYKY 794
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 221 bits (541), Expect = 3e-56
Identities = 126/378 (33%), Positives = 196/378 (51%), Gaps = 17/378 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + +L+ L+ G +PTPIQ +P ++GRD++ A TGSGKT F LPI
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPI--- 59
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
L Q + P L+I P+RELA Q + + H +P I + GGV+
Sbjct: 60 -LHQLIDRP---RGTTRALVITPTRELAAQILEDLNDLAVH-----TP-ISAAAVFGGVS 109
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+ ++GV +++ TPGRL+D +L +L +DEADRM+DMGF D+R I
Sbjct: 110 IRPQEHAFRRGVDVLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLDMGFLPDIRRIL 169
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
+ +RQTL FSATMP I AR L P TVN+ R A + + Q + P E +
Sbjct: 170 KHIPARRQTLFFSATMPAPIGVLAREMLRNPATVNINRIAAPAAGITQAVYPVAQELKAA 229
Query: 424 QLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG 482
L+ L++ L+F K + + E+L+ +G++A IHG + Q R+ A+ F+ G
Sbjct: 230 LLVALLKRDDIRDALVFTRTKHRANRLAEHLVRQGIKAERIHGNRSQGRRTEALAGFKAG 289
Query: 483 EKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDH 542
+ VLVATD+A++G+D + HV+N+D+P ++Y+HR+ +
Sbjct: 290 KYRVLVATDIAARGIDVTELGHVVNFDVPLVPDDYIHRVGRTARAEATGDAFTFVSPQEQ 349
Query: 543 SVLRDLVHLLREAGQRVP 560
DL + R G+++P
Sbjct: 350 G---DLTRIERVIGKQLP 364
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 221 bits (541), Expect = 3e-56
Identities = 131/389 (33%), Positives = 205/389 (52%), Gaps = 16/389 (4%)
Query: 182 RTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPII 241
R+FQ + ILRGL A PTPIQ + +P L G+D++G A TGSGKT F +PI+
Sbjct: 790 RSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPIL 849
Query: 242 MFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGG 301
L + K+P R I+ P+RELA Q +++ KL +I C +GG
Sbjct: 850 ERLLFRPRKVPTSRVA-----ILMPTRELAVQCYNVAT------KLATYTDITFCQLVGG 898
Query: 302 VAVSECMEVVQKGVHIMVATPGRLMD-MLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVR 360
++ E V++K +++ATPGR +D M + ++ L +DEADRM++ GF +++
Sbjct: 899 FSLREQENVLKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELN 958
Query: 361 TIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQD---LEPAQ 417
I + RQT+LFSATM + R L RPV + V ++T+ Q+ L P +
Sbjct: 959 EILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDTKKNTAVTLVQEFVRLRPGR 1018
Query: 418 PEARTVQLLH-CLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAV 476
+ R LLH C + ++F +K++ V L G++A +HG QE+R ++V
Sbjct: 1019 EDKRLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIVFGLLGLKAAELHGSMSQEQRIKSV 1078
Query: 477 EAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXX 536
E+FR G + L+ATD+AS+GLD ++ VINY+ P+ E YVHR+
Sbjct: 1079 ESFRDGNVNFLLATDLASRGLDIKGVETVINYEAPQSHEIYVHRVGRTARAGRSGRACTI 1138
Query: 537 XXXPDHSVLRDLVHLLREAGQRVPGFLLD 565
PD V++ V + G ++ ++D
Sbjct: 1139 AAEPDRKVVKAAVKAGKAQGAKIVSRVVD 1167
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 219 bits (536), Expect = 1e-55
Identities = 146/433 (33%), Positives = 221/433 (51%), Gaps = 28/433 (6%)
Query: 153 ILELPETRHEMIRNKL-RILVEGDDPPPPIRTFQHMKFPKGILRGL-EAKGIQKPTPIQV 210
I ++ E ++ R L I V+G + P PI+++ IL L E K KP PIQ
Sbjct: 665 ISQMTEDEVKIYRENLGEIQVKGQEVPRPIKSWLQSGLSDRILEVLIEKKKYDKPFPIQC 724
Query: 211 QGMPAVLNGRDMI-----------GIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGP 259
Q +P +++GRDMI IA TGSGKTL + LP+I Q P +GP
Sbjct: 725 QSLPVIMSGRDMIDFLREQAKSKDSIAETGSGKTLAYLLPMIRHVSAQR---PLQEGDGP 781
Query: 260 YGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMV 319
GLI+ P+RELA Q + + F++ K EI + GG + + +++G I+V
Sbjct: 782 IGLILVPTRELATQIYLEAKPFLKAYKY----EIVA--VFGGTGIKGQLSELKRGCEIVV 835
Query: 320 ATPGRLMDML---DKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFS 376
ATPGRL+D+L + K+ L + +DEADRM D+GFE + I + +QT+LFS
Sbjct: 836 ATPGRLIDVLTTSNGKITNLKRITMVVIDEADRMFDLGFEPQIAKILATTRPDKQTVLFS 895
Query: 377 ATMPKKIQNFARSALV-RPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCL--QKTP 433
AT PK ++N A+ + +PV V VG G A + Q +E R +LL L
Sbjct: 896 ATFPKNVENLAKKLMRHKPVEVVVGARGQACTNITQLIEIRDESTRLFRLLELLGIYTEQ 955
Query: 434 PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVA 493
+IF +++ +VD +++ L + +H G D E+R + FR+G +L+AT ++
Sbjct: 956 GQVIIFVDKQIEVDFLYQELRSRYYIPTILHAGVDAEDRVNNLLDFRKGIYKILIATSLS 1015
Query: 494 SKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLR 553
S+GLD N+ V+NY P IE+Y+HRI + DL+ L+
Sbjct: 1016 SRGLDVKNVVLVVNYKCPNHIEDYIHRIGRTGRAGNKGTAVTFIGPEEDKYSLDLIKALK 1075
Query: 554 EAGQRVPGFLLDM 566
+ Q+VP LL M
Sbjct: 1076 RSDQKVPEELLRM 1088
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 219 bits (536), Expect = 1e-55
Identities = 122/341 (35%), Positives = 194/341 (56%), Gaps = 13/341 (3%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F+ + ++ + +G T IQ + +P VL D++ +A TG+GKT FTLP++
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQ 61
Query: 243 -FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGG 301
+Q K+ +R+ LI+ P+RELA Q ++ + L IRS GG
Sbjct: 62 RLAAKQSTKVQGVRS-----LIVTPTRELAAQVAISVEIYSTQLN------IRSFAVYGG 110
Query: 302 VAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRT 361
V + + +Q+GV +++ATPGRL+D+ +++ + L DEADRM+D+GF +DV+
Sbjct: 111 VRIEPQIAQLQEGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDDVKR 170
Query: 362 IFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEAR 421
I S +RQTLLFSAT K+I++FAR L P T+ V + V Q P + +
Sbjct: 171 IQSLLPVKRQTLLFSATFSKQIKHFAREMLNAPKTIEVSAVNSTVDLVAQTFHPIEQARK 230
Query: 422 TVQLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
+ L+ +Q+ TL+F K+ DA+ L G+ A +IH + Q R++A+ AF+
Sbjct: 231 SAALIQLIQQHRWSQTLVFIRTKRTADALVTELEDAGIAAASIHANRTQHARTQALNAFK 290
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
GE VLVATD+A++G+D + + V+NYD+P E+YVHRI
Sbjct: 291 AGEIQVLVATDIAARGIDVSQLPCVVNYDLPYVPEDYVHRI 331
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 219 bits (536), Expect = 1e-55
Identities = 129/390 (33%), Positives = 218/390 (55%), Gaps = 15/390 (3%)
Query: 137 IQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRG 196
IQYEE ++ I L + E I+ + +I V+G++ P PI +F H++ + ++
Sbjct: 143 IQYEEFESNFYQEHEEIANLNVAQVEKIKREYQIHVKGNNVPKPIISFGHLQLDQKLVNK 202
Query: 197 LEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRN 256
+ A+ +KPT IQ Q +P VL+GR++IG+A TGSGKT+ + P+++ Q +
Sbjct: 203 IVAQNFEKPTAIQSQALPCVLSGRNVIGVAKTGSGKTIAYVWPMLVHVSAQRAVE---KK 259
Query: 257 EGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVH 316
EGP GL++ P+REL +Q + + + + +++ S +GG + ++ GV
Sbjct: 260 EGPIGLVVVPTRELGQQVYLETKKYAQLFQISVSA------LLGGENKHHQWKELRAGVD 313
Query: 317 IMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFS 376
I++ATPGRL++M+ KK L C Y+ +DEAD+M +GFE +R+I +Q LLF+
Sbjct: 314 IIIATPGRLIEMVKKKATNLQRCTYIVLDEADQMFSLGFEYQIRSIIGQIRPDKQILLFT 373
Query: 377 ATMPKKIQNFARSALVRPVTVNVG-RAGAASLTVRQ-DLEPAQPEARTVQLLHCLQK--T 432
ATM KKI+ L+ P+ + +G + ++Q + E R LL L+
Sbjct: 374 ATMKKKIRQLCVDMLIDPIVITIGENENQVNEDIKQLPVIVDDDEGRLRWLLQNLKTYLQ 433
Query: 433 PPPTLIFAERKQDVDAVHEYLLLK-GVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATD 491
LIFA + +++ + K G++ + ++G K Q ER+ + F++ +L+ATD
Sbjct: 434 NGKVLIFANQMGQCESLLSEIKQKLGIQGLTLYGDKLQYERTLIINQFKQ-HVHLLIATD 492
Query: 492 VASKGLDFANIQHVINYDMPEDIENYVHRI 521
+AS+GLD I+ VINY P+D + Y+HRI
Sbjct: 493 IASRGLDIKEIRTVINYFPPKDADIYIHRI 522
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 219 bits (535), Expect = 2e-55
Identities = 127/326 (38%), Positives = 183/326 (56%), Gaps = 11/326 (3%)
Query: 197 LEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRN 256
L+ G ++PTPIQ Q +P VL G D++ A TG+GKT F LPII E+ K P
Sbjct: 19 LKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPII----EKLSKNPIDGY 74
Query: 257 EGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVH 316
L++ P+RELA Q D + R L + R GGV V ++ +++G
Sbjct: 75 RPVRALVLAPTRELAIQVADNTLEYGRDLGM------RVISVYGGVPVENQIKRLKRGTD 128
Query: 317 IMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFS 376
I+VATPGRL+D+L +K + L YL +DEADRM+D+GF + ++ I Y A RQTLLF+
Sbjct: 129 ILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDRQTLLFT 188
Query: 377 ATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTP-PP 435
AT + ++ A L P + V + + +RQ + L + + +
Sbjct: 189 ATADESVEVLAEFYLNNPTKIKVTPRNSTAKQIRQFAYQVDYGQKADILSYLITEGKWGQ 248
Query: 436 TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASK 495
TL+F K+ VD + +YL +G+ A AIHG K Q ER R + F G+ VLVATDVA++
Sbjct: 249 TLVFVRTKKRVDELTQYLCKEGINAAAIHGEKSQRERVRMLNEFIAGDLHVLVATDVAAR 308
Query: 496 GLDFANIQHVINYDMPEDIENYVHRI 521
GLD ++ +V+NYD+P E YVHRI
Sbjct: 309 GLDIESLPYVVNYDLPNQPEAYVHRI 334
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 219 bits (535), Expect = 2e-55
Identities = 125/373 (33%), Positives = 200/373 (53%), Gaps = 14/373 (3%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + P + L++ G + TPIQ +P +L GRD++G+A TG+GKT F LPI+
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILA- 69
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
+VK+ P L++CP+RELA+Q + + + R G +R GG
Sbjct: 70 --NIDVKV-----RSPQALVLCPTRELAQQVAEAFRSYGR-----GMGGLRILSIFGGAD 117
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+ + ++ +++G HI+VATPGRL+D ++++ + L + +DEAD M+ MGF +DV TI
Sbjct: 118 MRQQLKSLREGTHIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDVDTIL 177
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
+ +R+ LFSATMPK++++ A L P ++V A + + Q A+ ++
Sbjct: 178 AKTPKERKVALFSATMPKRVRDIANKHLSNPAEISVAAAATTNENIEQCYWLAKGASKLE 237
Query: 424 QLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG 482
L L + ++F ++ + E L G++A ++G DQ+ R R V + G
Sbjct: 238 ALKRLLAFEDTEGVIVFTRTRESTTVIAEQLRQTGLKASPLNGDMDQKMRLRTVSDLKSG 297
Query: 483 EKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDH 542
DVLVATDVA++GLD I HVINYD+P D E YVHRI +
Sbjct: 298 ALDVLVATDVAARGLDVERITHVINYDVPFDEEAYVHRIGRTGRAGRKGKAILFVVPRER 357
Query: 543 SVLRDLVHLLREA 555
+LR++ L R++
Sbjct: 358 RMLRNIERLTRQS 370
>UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania infantum
Length = 924
Score = 219 bits (535), Expect = 2e-55
Identities = 125/390 (32%), Positives = 203/390 (52%), Gaps = 20/390 (5%)
Query: 180 PIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLP 239
P+ F + + +E G +KPTP+Q G+P L+G D++ A TGSGKT F +P
Sbjct: 470 PVEDFADLLVEPALAANIERCGYKKPTPVQRYGIPVALSGSDLMACAQTGSGKTAAFLIP 529
Query: 240 IIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAI 299
++ + L V R P L++ P+RELA Q D ++ KLT + +I +
Sbjct: 530 VVQYMLVHGVSPARQRKSYPIALVLAPTRELAVQIFDEVR------KLTFNTDIFYDVVY 583
Query: 300 GGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDV 359
GG + E I+VA PGRL DM +++ + + ++L +DEADRM++MGFEE +
Sbjct: 584 GGTRYPQRFEQ-----DILVACPGRLRDMFNEEYLSFSAIKFLILDEADRMLEMGFEEQI 638
Query: 360 RTIFSY------FAGQRQTLLFSATMPKKIQNFARSALVRPV-TVNVGRAGAASLTVRQD 412
+ + +RQT +FSAT P++I N A+ L R + VGR G+ + + Q
Sbjct: 639 EELVASRYTDMPTVDERQTFMFSATFPQRILNLAKRYLRRKYYLLTVGRVGSTTKNITQT 698
Query: 413 LEPAQPEARTVQLLHCL--QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQE 470
+E + +LL + + LIF E K+ + V+ L +G+ + IHG + Q+
Sbjct: 699 IEHVPDNEKMDRLLQIIYGHEMSDMVLIFVETKKMAEDVNRRLHREGISSTTIHGDRRQQ 758
Query: 471 ERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXX 530
+R A+E F++ +LVATDVAS+GLD ++ HV+ +D+P+++++Y HRI
Sbjct: 759 DREAALEDFKQKVTPILVATDVASRGLDIPDVAHVVQFDLPQEMDDYTHRIGRTGRAGNK 818
Query: 531 XXXXXXXXXPDHSVLRDLVHLLREAGQRVP 560
+ + DL E GQ +P
Sbjct: 819 GIATAFYNRNNRRLALDLHKYFSEHGQEIP 848
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 219 bits (534), Expect = 2e-55
Identities = 128/373 (34%), Positives = 203/373 (54%), Gaps = 15/373 (4%)
Query: 203 QKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKM---PFIR--NE 257
Q+PTPIQ+Q +P +L+G+D++ A TG+GKT F LP++ L + + P + N
Sbjct: 22 QQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLHQLLTHQDNLAAQPDTQHINS 81
Query: 258 GPY-GLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVH 316
P L++ P+RELA+Q H I+ + GS + S + GGV++ E + + G H
Sbjct: 82 TPITALVLVPTRELAQQVHSSIEQYAY-----GS-SVTSVMVYGGVSIGEQIRQLANGTH 135
Query: 317 IMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFS 376
I+VATPGRL+D+L K+ + L+ +L DEADRM+DMGF++++ + RQTLLFS
Sbjct: 136 ILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKDEIVEVLKRLPSTRQTLLFS 195
Query: 377 ATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCL-QKTPPP 435
AT+ ++ +F+R L P + V + + ++ + + + L H + Q++
Sbjct: 196 ATLDDRMLSFSRRLLRSPQVIEVAQRNTTASSIVERVFNVDANRKCAMLCHLITQESWLQ 255
Query: 436 TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASK 495
+LIF+ KQ DA+ + + GV A A H Q R + + AF+ GE LVATDVA++
Sbjct: 256 SLIFSRTKQGADALVKQMKQAGVAAEAFHADLSQAVREQVLAAFKAGEVTALVATDVAAR 315
Query: 496 GLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLL--R 553
GLD + +V+N ++P +E+YVHRI D +L L L R
Sbjct: 316 GLDINELNYVVNMELPFQVEDYVHRIGRTGRAGKAGQAITLLSIDDEPLLTKLEAFLDRR 375
Query: 554 EAGQRVPGFLLDM 566
Q + GF D+
Sbjct: 376 LPQQWLAGFEPDL 388
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 218 bits (533), Expect = 3e-55
Identities = 123/323 (38%), Positives = 188/323 (58%), Gaps = 20/323 (6%)
Query: 201 GIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPY 260
G ++P+P+Q +P VL G DMI A TG+GKT F LPI M ++ +G
Sbjct: 20 GFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPI----------MSMMKADGSV 69
Query: 261 -GLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMV 319
GL+I P+RELA Q D R KL+G +++ GG A + +E + K I+V
Sbjct: 70 EGLVIVPTRELAMQVSD---ELFRFGKLSG---LKTATVYGGTAYGKQIERI-KQASIVV 122
Query: 320 ATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATM 379
ATPGRL D+L ++LN ++ +DEAD M+DMGF ++++ IF++ +RQTL+FSATM
Sbjct: 123 ATPGRLQDLLMSGKIKLNP-HFVVLDEADEMLDMGFLDEIKNIFTFLPKERQTLMFSATM 181
Query: 380 PKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQ-KTPPPTLI 438
P I+ A L P TV++ ++ + + + Q Q R L+ + K P +I
Sbjct: 182 PNGIRKLAEQILNNPKTVSITKSESTNSKITQYYYVVQERERDDALVRLIDYKNPEKCII 241
Query: 439 FAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLD 498
F K++VD + +L +G + +HG +Q++R + AF++G D+ VATDVA++GLD
Sbjct: 242 FCRMKKEVDRLVAHLTAQGFKVSGLHGDMEQKQREVTIRAFKQGGIDIFVATDVAARGLD 301
Query: 499 FANIQHVINYDMPEDIENYVHRI 521
++ HV NY +P D E+YVHRI
Sbjct: 302 VNDVTHVFNYHIPFDSESYVHRI 324
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 218 bits (533), Expect = 3e-55
Identities = 124/342 (36%), Positives = 196/342 (57%), Gaps = 18/342 (5%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F + ++R L KG + T IQ Q + A+L GRD++GI+ TGSGKT F +PII
Sbjct: 56 SFASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIE 115
Query: 243 FCLEQEVKMPFIRNEGPY-GLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGG 301
L +N G + LI+ P+RELA Q I Q F L+ + S IGG
Sbjct: 116 HAL---------KNPGQFTALIVTPTRELALQ---IDQEF---KSLSKGMRLHSATFIGG 160
Query: 302 VAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRT 361
++ M+V+ + +H++V TPGRL+D+ ++K+++LN + L +DE DRM+DMGF DV+
Sbjct: 161 TNINTDMKVLSRKLHVIVGTPGRLLDLTNRKLLKLNQVKTLVLDEFDRMLDMGFVNDVKK 220
Query: 362 IFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQD-LEPAQPEA 420
+ + QT+LFSAT+ +N +S L PV V + + + + Q + + +
Sbjct: 221 LVGGMTQREQTMLFSATLEPNQKNLIQSLLKNPVEVKINTGVSTNENIEQGIIRVPEGKD 280
Query: 421 RTVQLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAF 479
+ L Q + ++F E K+ D + + L GV++ IHG K Q R++ +E F
Sbjct: 281 KFGMLADLFQNRAMDKVIVFTETKRLADRLSKKLNQAGVKSGLIHGNKSQNFRNKTIEQF 340
Query: 480 RRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ GE VLVATDVA++G+D A++ HVINY +P +++Y+HRI
Sbjct: 341 KSGETRVLVATDVAARGIDVADVSHVINYQLPMTMDSYIHRI 382
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 218 bits (532), Expect = 4e-55
Identities = 125/388 (32%), Positives = 202/388 (52%), Gaps = 21/388 (5%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F M +L+ ++ KG +KPTPIQV+ +P + G D++G A TG+GKT F +PI+
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILN- 64
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAI-GGV 302
I+ EG L++CP+RELA Q + I R +++ LAI GG
Sbjct: 65 --------RVIKGEGLQALVLCPTRELAVQVTEEISSLSRRMRI-------QVLAIYGGQ 109
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++ + +++ I+V TPGRLMD +++ + L+ +Y+ +DEAD M+DMGF D++ I
Sbjct: 110 SIELQLRSLRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKI 169
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
S +RQT LFSAT+P +++ + +P + + + Q +
Sbjct: 170 LSQCPRERQTFLFSATLPDEVRELGTKFMKQPEIILIESPERTVPEIEQYYYQVNSRRKI 229
Query: 423 VQLLHCLQKTPPP-TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L + PP +LIF K++ D + L +G A A+HG Q ER + FR+
Sbjct: 230 ETLCRIIDAQQPPISLIFCRTKRNADELARVLTSRGYNADALHGDMSQRERDHVMHGFRQ 289
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPD 541
G +LVATD+A++GLD + HV N+D+PED+++Y+HR+ +
Sbjct: 290 GNTKILVATDLAARGLDIELVTHVFNFDIPEDLDSYIHRVGRTGRAGRSGIAITLV---E 346
Query: 542 HSVLRDLVHLLREAGQRVPGFLLDMLGE 569
+ +R L + R G+R+ LL L E
Sbjct: 347 PTQIRLLRMIERHTGKRIERALLPTLAE 374
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 217 bits (531), Expect = 5e-55
Identities = 122/340 (35%), Positives = 184/340 (54%), Gaps = 14/340 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F M P +L L A PTPIQ+Q +PA+L G+D++G A TG+GKT F LP +
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALA 68
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
++ VK + L++ P+RELA Q + ++ F ++ G + GG
Sbjct: 69 K-IDASVKQTQV-------LVVTPTRELAIQVAEALEGFAAKMRGVGVATV-----YGGA 115
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++ +++G I+V TPGRL+D+L+K +++L+ + +DEAD M++MGF ED+ TI
Sbjct: 116 PFGPQVKALKQGTAIVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEMLNMGFIEDIETI 175
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
Q LFSATMP I+ A++ L P+ + + T++Q Q +
Sbjct: 176 LKAVPNTAQRALFSATMPNAIRKLAKTFLKDPLNIQIEAIAREKATIKQKAWKVQGMTKM 235
Query: 423 VQLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L L+ TP LIF +QD V E L G +A + G +Q +R + V R
Sbjct: 236 TALTRLLEVTPYQRALIFVRTRQDTMDVAELLQRNGFKAAPLSGDLNQAQREQTVSQLRS 295
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
G ++LV TDV ++GLD I HVINYD+P D E+YVHRI
Sbjct: 296 GHIEILVGTDVVARGLDVPEITHVINYDLPSDTESYVHRI 335
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 217 bits (531), Expect = 5e-55
Identities = 130/379 (34%), Positives = 193/379 (50%), Gaps = 15/379 (3%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TF+ + + IL+ L G +KP+PIQ + +P L GRD++G A TG+GKT F PI+
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPIL- 60
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
Q + LI+ P+RELA Q + + + +HL L RS + GGV
Sbjct: 61 ----QRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPL------RSAVIFGGV 110
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++ ++KGV I+VATPGRL+D+ + V L+ +DEADRM+DMGF DVR +
Sbjct: 111 GQQPQVDKLKKGVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRV 170
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
+QTL FSATMP ++ + L PV V V + + Q + +T
Sbjct: 171 LKLLPAVKQTLFFSATMPPEVMDLVNGLLKNPVKVAVDPVSSPVEIIDQSVYLVDKGNKT 230
Query: 423 VQLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L ++ ++F K + V L+ G+ A AIHG K Q R +A+ F+
Sbjct: 231 KLLAWLVEGLDVKNAIVFTRTKHGANKVAGDLVKAGITAAAIHGNKSQTARQQALADFKA 290
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPD 541
G+ LVATD+A++GLD + HV NY++PE E YVHRI +
Sbjct: 291 GKVRCLVATDIAARGLDIEELSHVFNYNLPEVPETYVHRIGRTGRAGRGGTAVSFCDFGE 350
Query: 542 HSVLRDLVHLLREAGQRVP 560
L+D+ L+ G++VP
Sbjct: 351 QEYLKDIEKLI---GRKVP 366
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 217 bits (530), Expect = 7e-55
Identities = 136/401 (33%), Positives = 210/401 (52%), Gaps = 22/401 (5%)
Query: 178 PPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFT 237
P PI T + + F + ++ +K +KPTP+Q G P L+G DM+GI+ TGSGKTL F
Sbjct: 136 PKPIDTIESVPF-QSTIKNFLSKKFEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFI 194
Query: 238 LPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCL 297
LP I L Q + + GP L++ P+RELA Q + + ++R + + EI +
Sbjct: 195 LPAIEHILAQPRQSYY---PGPSVLVVAPTRELANQINQEAEQYLRLVNI----EIATIY 247
Query: 298 AIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEE 357
G S+ +++ ++ I+V TPGR++D ++ + L +L +DEADR+++MGFE+
Sbjct: 248 G-GAPRRSQQLQLSRRP-KIVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQ 305
Query: 358 DVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG-AASLTVRQDLEPA 416
+ IF+ RQ L +SAT PKK+ +FA + P+ + +G + A+ + Q +
Sbjct: 306 QIDGIFNSIRPDRQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIV 365
Query: 417 QPEARTVQ-LLHCLQK-----TPPPTLIFAERKQDVDAVHEYLLLKG--VEAVAIHGGKD 468
+A V L+ L + TLIF K+ D + Y+ G V +HG D
Sbjct: 366 PTDADKVDALMDTLGEIYSADEKAQTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVD 425
Query: 469 QEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI---XXXX 525
Q R R V+ F+ D++VATDVAS+GLD I HVIN+ +P D E YVHRI
Sbjct: 426 QNRRERIVQDFKNKRLDIVVATDVASRGLDIKGISHVINFSLPSDCETYVHRIGRTGRAG 485
Query: 526 XXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
D ++ DL +LL+ + Q VP LD+
Sbjct: 486 ALGTSHSILSNNSLDDMELVGDLTNLLQRSEQEVPSEFLDI 526
>UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 41 - Arabidopsis thaliana (Mouse-ear cress)
Length = 505
Score = 217 bits (530), Expect = 7e-55
Identities = 126/412 (30%), Positives = 208/412 (50%), Gaps = 15/412 (3%)
Query: 162 EMIRNKLRILVEGDDP--PPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNG 219
+++R KL I V+G PPP+ TF P +L LE G PTPIQ+Q +PA L G
Sbjct: 88 QLLRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTG 147
Query: 220 RDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQ 279
+ ++ A TGSGKT F +PII C + P + P +++ P+REL Q D
Sbjct: 148 KSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVED--- 204
Query: 280 HFIRHLKLTGSP-EIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNV 338
K+ G ++ L +GG +S + +Q+GV +++ TPGR++D+L K + L+
Sbjct: 205 ----QAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDN 260
Query: 339 CRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVN 398
+DE D M+ GF + V IF + Q Q LLFSAT+ ++++ S + V+
Sbjct: 261 IMTFVLDEVDCMLQRGFRDQVMQIFQALS-QPQVLLFSATISREVEKVGGSLAKEIILVS 319
Query: 399 VGRAGAASLTVRQ---DLEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAV-HEYLL 454
+G + V Q ++ Q + + +L PP +++ + D + + +
Sbjct: 320 IGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITV 379
Query: 455 LKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDI 514
+ GV+A++IHG K +ER + +F GE VLV+T V +G+D ++ VI +DMP I
Sbjct: 380 VTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTI 439
Query: 515 ENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
+ Y+H I D ++ DLV L+ +G +P L+++
Sbjct: 440 KEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELINL 491
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 217 bits (529), Expect = 1e-54
Identities = 139/414 (33%), Positives = 211/414 (50%), Gaps = 35/414 (8%)
Query: 178 PPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGM-------------------PAVLN 218
P P + KFPK I+ +E +P PIQ Q + P VL+
Sbjct: 190 PQPFIKWNETKFPKYIMSVIEDSKFSEPMPIQAQYVTNKKQKKKYKMYECSFIPFPIVLS 249
Query: 219 GRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDII 278
G D+IGIA TGSGKTL F LP ++ Q+ P EGP L++ P+RELA Q +
Sbjct: 250 GHDLIGIAQTGSGKTLSFMLPALVHINAQDPVKP---GEGPIALVLAPTRELANQIQE-- 304
Query: 279 QHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNV 338
Q F K +I S GG + ++ G I++ATPGRL+D L+ ++ L
Sbjct: 305 QCF----KFGSKCKISSVCVYGGAPKIYQEKELRNGCDIVIATPGRLIDFLESNVIDLKR 360
Query: 339 CRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVR-PVTV 397
YL +DEADRM+DMGFE +R I RQTL+FSAT P+ ++ A P+ +
Sbjct: 361 VTYLVLDEADRMLDMGFEPSIRKIVGQIRPDRQTLMFSATWPQTVRRLALDFCHGDPIHI 420
Query: 398 NVG-RAGAASLTVRQDLE---PAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYL 453
+G + + Q +E +Q R ++L + ++ T+IF + K+D D + + L
Sbjct: 421 QIGDMENNVNNDIDQQVEIIDKSQKYDRVKEILSTMTRSDK-TIIFTQTKKDCDDLSKAL 479
Query: 454 LLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPED 513
+ + IHG K Q +R + ++ F+ G + L+ATDVAS+GLD +I+ VINYD P+
Sbjct: 480 QTDNIRNICIHGDKSQRDRDKVMDLFKTGRVNTLIATDVASRGLDVKDIKLVINYDFPKQ 539
Query: 514 IENYVHRI-XXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
IE+YVHR+ D + ++LV +L++ Q + LL++
Sbjct: 540 IEDYVHRVGRTGRAGAQGKAISFLDQYEDKKISKELVDVLKQNNQEISQDLLEL 593
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 217 bits (529), Expect = 1e-54
Identities = 118/339 (34%), Positives = 191/339 (56%), Gaps = 11/339 (3%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + +++ + G PTPIQ + +P++L G++++ A TG+GKT F LP+
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPL--- 59
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
L + P IR + +I+ P+RELA Q + I + ++L LT + GGV
Sbjct: 60 -LHRFADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLT------AMAMYGGVD 112
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+ + + +GV ++VATPGRL+DM ++ +R + L +DEADRM+DMGF ED+ +I
Sbjct: 113 AAPQKKRLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSII 172
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
QRQ LLFSAT+ K+++ A+SA+ + + + R AAS + Q L + ++
Sbjct: 173 EKLPEQRQNLLFSATLSKQVKALAKSAIPDAIEIEISRKSAASTHIDQWLTTVDKDKKSA 232
Query: 424 QLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG 482
L H +Q+ LIF + K + L +G+ A A H G+ Q R + + F+ G
Sbjct: 233 LLSHLIQEQNWSQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAVREQLLIDFKAG 292
Query: 483 EKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ LVAT VAS+G+D + VINYD+P++ ++Y+HRI
Sbjct: 293 KVSFLVATGVASRGIDIDALARVINYDLPDEADDYIHRI 331
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 216 bits (528), Expect = 1e-54
Identities = 124/381 (32%), Positives = 196/381 (51%), Gaps = 14/381 (3%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPI 240
I +F ++ GI++ + G ++PTPIQ + +P +L G D+ G A+TG+GKT F +P
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPA 62
Query: 241 IMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIG 300
I C P RN +++CPSRELA Q + H K I G
Sbjct: 63 IELC------QPANRNVQT--IVLCPSRELAVQVGTELNKLAMHKK-----GISILPVYG 109
Query: 301 GVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVR 360
G + ++ + +GV I++ TPGR++D + +K + L+ + +DEAD+M+DMGF ED+
Sbjct: 110 GQPIERQIKALSRGVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFREDIE 169
Query: 361 TIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEA 420
I S+ +RQT++ SAT P +I + +R P+ V + + Q + A
Sbjct: 170 EILSHIPKERQTVILSATFPPEILDISRRFQKNPIDVKMVHQELTVPQIEQYYIEVREPA 229
Query: 421 RTVQLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAF 479
+ L+ L+ P T+IF + VDAV L +G A +HGG Q +R + + AF
Sbjct: 230 KADTLIRVLEFYQPQRTIIFCNTQIAVDAVSSALKAEGFLADGLHGGMAQAQRDKVMNAF 289
Query: 480 RRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXX 539
R+G+ ++L+ATDVA++G+D I V N+D P+D E YVHRI
Sbjct: 290 RKGQLEILIATDVAARGIDVEEIDLVCNFDFPQDDEYYVHRIGRTARAGRTGRAISFVSP 349
Query: 540 PDHSVLRDLVHLLREAGQRVP 560
+ LRD+ R + +P
Sbjct: 350 RERYRLRDVRRSTRAEPEPLP 370
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 216 bits (527), Expect = 2e-54
Identities = 118/330 (35%), Positives = 185/330 (56%), Gaps = 16/330 (4%)
Query: 193 ILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMP 252
+L+G+ G P+P+Q Q +P +L G+D+I A TG+GKT F +PI+
Sbjct: 56 VLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILN---------T 106
Query: 253 FIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQ 312
RN+ LII P+RELA Q + I LKL I++ GG ++ ++++
Sbjct: 107 LNRNKDIEALIITPTRELAMQISEEI------LKLGRFGRIKTICMYGGQSIKRQCDLLE 160
Query: 313 KGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQT 372
K M+ATPGRL+D L + + + +DE+D M+DMGF +D+ IF + RQT
Sbjct: 161 KKPKAMIATPGRLLDHLQNGRIAHFSPQIVVLDESDEMLDMGFLDDIEEIFKFLPNTRQT 220
Query: 373 LLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQ-K 431
LLFSATMP+ I+ A L P V + + + Q R ++ ++ +
Sbjct: 221 LLFSATMPEPIKALAMKILNEPAFVKITPTDVTNQDIEQQYYIINEGERDEAIVRLIETQ 280
Query: 432 TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATD 491
P ++IF K++ DA+ L +G +A+A+HG +Q +R A++AFR + ++LVATD
Sbjct: 281 NPTKSIIFTRMKKEADALAIRLANRGFKAIALHGDMEQRDRREAIKAFRENKIEILVATD 340
Query: 492 VASKGLDFANIQHVINYDMPEDIENYVHRI 521
VAS+GLD +++ HV NY +P + E+YVHRI
Sbjct: 341 VASRGLDISDVSHVFNYHIPLNPESYVHRI 370
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 216 bits (527), Expect = 2e-54
Identities = 128/388 (32%), Positives = 202/388 (52%), Gaps = 16/388 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+FQ M + ILRGL + G KPTPIQ + +P L G+D++G A TGSGKT F +PI+
Sbjct: 294 SFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILE 353
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
L + K+P R +I+ P+RELA Q H + +KL +I+ CLA+GG+
Sbjct: 354 RLLYRPKKVPTTRV-----VILTPTRELAIQCHAVA------VKLASHTDIKFCLAVGGL 402
Query: 303 AVSECMEVVQKGVHIMVATPGRLMD-MLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRT 361
++ ++ +++ATPGR +D M + ++ L +DEADRM++ GF +++
Sbjct: 403 SLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNE 462
Query: 362 IFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQD---LEPAQP 418
I + RQT+LFSATM + R+ L +PV + + T+ Q+ L P +
Sbjct: 463 ILTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIMADSQKKTAGTLVQEFVRLRPGRE 522
Query: 419 EARTVQLLH-CLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVE 477
R LLH C +IF +K+ + L G+ +HG +Q +R ++VE
Sbjct: 523 SKREGYLLHICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCAELHGSMNQAQRIQSVE 582
Query: 478 AFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXX 537
FR G+ + L+ATD+AS+GLD + VINY+ P+ E YVHR+
Sbjct: 583 DFRDGKVNFLLATDLASRGLDIKGVDTVINYEAPQTPEIYVHRVGRTARAGRSGTAITLA 642
Query: 538 XXPDHSVLRDLVHLLREAGQRVPGFLLD 565
PD V++ V + G ++ ++D
Sbjct: 643 AEPDRKVVKAAVKAGKSQGAKISSRIID 670
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 215 bits (526), Expect = 2e-54
Identities = 128/343 (37%), Positives = 190/343 (55%), Gaps = 15/343 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F ++ + +L + A G PTPIQ Q +P VL +D++GIA TG+GKT F LP++
Sbjct: 2 SFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARKDVLGIAQTGTGKTAAFVLPMLT 61
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
+ R P LI+ P+RELA Q + ++F R+ ++ L IGGV
Sbjct: 62 ILEKGRA-----RARMPRTLILEPTRELAAQ---VKENFDRY---GAGQKLNVALLIGGV 110
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
+ + + +GV +++ATPGRL+D ++ + L L +DEADRM+DMGF D+ I
Sbjct: 111 SFGDQDAKLTRGVDVLIATPGRLLDHTERGGLLLTGVELLVIDEADRMLDMGFIPDIERI 170
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
RQTL F+ATMP +I+ + L P V V + ++TV Q PA +A
Sbjct: 171 CKLVPFTRQTLFFTATMPPEIRRITETFLHNPQKVEVSKPATTAVTVTQSQVPAGKKAHE 230
Query: 423 V-QLLHCL---QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEA 478
+LL L K +IF RK++V VH+ L G A+HG DQ R A+E
Sbjct: 231 KRELLRRLLREAKDLKNAIIFCNRKREVAIVHKSLQKHGFSVGALHGDMDQPARMAALEQ 290
Query: 479 FRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
FR+GE +LVA+DVA++GLD + HV N+D+P ++YVHR+
Sbjct: 291 FRKGELPLLVASDVAARGLDIPEVSHVFNFDVPHHPDDYVHRV 333
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 215 bits (526), Expect = 2e-54
Identities = 129/378 (34%), Positives = 196/378 (51%), Gaps = 13/378 (3%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F+ + I+ + KG ++PTPIQ + +PA++NG D++GIA TG+GKT F+LPII
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
++ I+ + LI+ P+RELA Q I + L L ++ + GGV
Sbjct: 64 FGRNKID---IKAKSTRSLILTPTRELASQIMQNIDDYSDGLGL------KTKVVYGGVG 114
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
++ ++ G+ I+VATPGRL+D+++ + +DEAD M+DMGF +DV++I
Sbjct: 115 RQAQVDSIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSII 174
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
S RQTLLFSATMP +I+ A + L P + + V Q + +
Sbjct: 175 SKLPKSRQTLLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSNKVP 234
Query: 424 QLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG 482
L + L K LIF + K D + + L + A ++H GK Q R A++ F+
Sbjct: 235 LLFNILTKADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDS 294
Query: 483 EKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDH 542
VLVATDVA++G+D NI VINY++PED NY+HRI D
Sbjct: 295 TLRVLVATDVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISFAVEND- 353
Query: 543 SVLRDLVHLLREAGQRVP 560
+R L ++ GQ +P
Sbjct: 354 --IRQLTNIENSIGQVIP 369
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 215 bits (526), Expect = 2e-54
Identities = 124/342 (36%), Positives = 186/342 (54%), Gaps = 9/342 (2%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPII- 241
+F + + ++R +EA G +PTP+Q + +PAVL GRD++ A TG+GKT F LPI+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 242 -MFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIG 300
+F K P L++ P+RELA Q HD + + R L I +C+ G
Sbjct: 62 RLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNF-----ISACI-FG 115
Query: 301 GVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVR 360
GV ++ ++ + KGV ++VA PGRL+D+ + V L+ L +DEADRM+DMGF DV+
Sbjct: 116 GVGMNPQVQAMAKGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMGFIHDVK 175
Query: 361 TIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEA 420
+ + +RQ LLFSAT K I + A L P + V + Q +
Sbjct: 176 KVLARLPAKRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVERIEQRVYRLPASH 235
Query: 421 RTVQLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAF 479
+ L H + L+F K + + EYL G+ A AIHG K Q R++A+ F
Sbjct: 236 KRALLAHLITLGAWEQVLVFTRTKHGANRLAEYLEKHGLTAAAIHGNKSQNARTKALADF 295
Query: 480 RRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ VLVATD+A++GLD + HV+N+++P E+YVHRI
Sbjct: 296 KANTVRVLVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRI 337
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 215 bits (526), Expect = 2e-54
Identities = 151/498 (30%), Positives = 232/498 (46%), Gaps = 19/498 (3%)
Query: 113 EEEHILESVAQSKALMGVAELAKGIQYEE---PI-KTSWRPPRCILELPETRHEMIRNKL 168
E+E +LE K + E I+ EE PI K + P I +T E +R +L
Sbjct: 27 EDELLLEKEEIEKTPVEKLESKIEIKQEEQRLPIRKNIYIPSSEISSKSQTDIEDLRKRL 86
Query: 169 -RILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAF 227
I+V G + PI + P ++ L +G ++PT IQ Q +P +L+GRD+IG A
Sbjct: 87 GNIVVHGLNVLCPIVNWTDCGLPAPLMSHLRLRGFKQPTSIQCQAIPCILSGRDIIGCAV 146
Query: 228 TGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKL 287
TGSGKTL F +P ++ L Q P + E +I+ P+RELA QTH I K+
Sbjct: 147 TGSGKTLAFIIPCLLHVLAQP---PTGQYEAA-AVILSPTRELAYQTH------IECQKI 196
Query: 288 TGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEA 347
+ +S +GG + + ++ G ++++ATPGR +D+L + YL +DEA
Sbjct: 197 FSLMDKKSACLVGGNDIENQLRAIKNGSNVIIATPGRFIDLLSSSAFNIKKVSYLVIDEA 256
Query: 348 DRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASL 407
DRM D+GFE V I RQTL+FSAT P ++ AR L + + VG +
Sbjct: 257 DRMFDLGFEPQVIRIAERMRKDRQTLMFSATFPHTVERIARKLLQNSIEIVVGLRNVVTP 316
Query: 408 TVRQDLEPAQPEARTVQLLHCL--QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHG 465
+ Q + + + LL L T L+F + + + L G +HG
Sbjct: 317 NINQSILVTNEDNKFNSLLKILGDYTTQGQALVFTNTQDRAEDLFGKLNKSGYSVGLLHG 376
Query: 466 GKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXX 525
D +R+ + FR G VLV T V ++G+D A+I VINYD P+ +YVHR+
Sbjct: 377 SMDSPDRNSILHDFREGRFSVLVLTSVGARGIDIASIICVINYDAPDHEADYVHRVGRTG 436
Query: 526 XXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGEPDVPAPAGQGCSYCAG 585
D + + + ++++G +P L D+ V AP G +G
Sbjct: 437 RAGKKGYAFTFVTDKDKTAAAGIKNAMKKSGCEIPKDLEDLC--QGVKAPGLNGFWRGSG 494
Query: 586 LGHRITECPKLEAVQNKQ 603
E L A++ Q
Sbjct: 495 FKFDKEEAKSLLALRKAQ 512
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 215 bits (525), Expect = 3e-54
Identities = 136/373 (36%), Positives = 198/373 (53%), Gaps = 19/373 (5%)
Query: 154 LELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGM 213
+E+ E H ++ P P TF + + + L A GI + IQ +
Sbjct: 84 IEMSELTHNLMDGTELAATAPVSPEAP--TFAELGARQETVDALAAAGITRAFAIQEYAL 141
Query: 214 PAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEG-PYGLIICPSRELAK 272
P L G D+IG A TG+GKTL F +P++ ++V P +G P L++ P+REL
Sbjct: 142 PIALRGVDLIGQAPTGTGKTLGFGVPLL-----EQVLAPAEGGDGTPQALVVVPTRELGI 196
Query: 273 QTHDIIQHFIRHLKLTGSPE-IRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDK 331
Q + L+ GS +R GGVA +E ++ GV I+V TPGRL+D+ +
Sbjct: 197 QV-------AKDLQAAGSTRGVRVLPIYGGVAYEPQIEALRSGVEILVGTPGRLLDLAKQ 249
Query: 332 KMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSAL 391
K ++L+ R L +DEADRM+D+GF +DV I + RQT+LFSATMP I +R L
Sbjct: 250 KHLKLDRVRALVLDEADRMLDLGFLDDVERILAILPEDRQTMLFSATMPDPIVALSRRFL 309
Query: 392 VRPVTVNVGRAGAASLTVR-QDLEPAQPEARTVQLL-HCLQ-KTPPPTLIFAERKQDVDA 448
RPVT++ G + + Q L ++++ LQ + T+IF K+ D
Sbjct: 310 RRPVTIHAGHTAETGPSPQTQQLAYRTHSLNKIEIVARILQARGRGLTMIFTRTKRAADR 369
Query: 449 VHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINY 508
V L +G A+HG Q R RA+ AFR G+ D LVATDVA++G+D + + HV+NY
Sbjct: 370 VAADLDFRGFAVAAVHGDLGQGARERALRAFRTGKIDTLVATDVAARGIDVSGVTHVLNY 429
Query: 509 DMPEDIENYVHRI 521
D PED + Y HRI
Sbjct: 430 DCPEDQDTYTHRI 442
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 215 bits (524), Expect = 4e-54
Identities = 120/326 (36%), Positives = 182/326 (55%), Gaps = 10/326 (3%)
Query: 197 LEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRN 256
L +GI + +PIQ + +P L G+D+IG A TG+GKTL F LPII + + R
Sbjct: 15 LAERGITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPIIQNLTAPDGRGSRERG 74
Query: 257 EGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVH 316
P ++I P+RELAKQ + + F + P++ + GG A +++GV
Sbjct: 75 RLPRAIVIAPTRELAKQ---VAEEFSK-----SGPQLSTVTVYGGAAYGPQENALRRGVD 126
Query: 317 IMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFS 376
++V TPGRL+D L++ + L+ +Y +DEAD M+ +GF + + TI RQT+LFS
Sbjct: 127 VVVGTPGRLIDHLERGNLDLSAIQYAVLDEADEMLSVGFADAIETILQQTPAARQTMLFS 186
Query: 377 ATMPKKIQNFARSALVRPVTVN-VGRAGAASLTVRQDLEPAQPEARTVQLLHCLQK-TPP 434
AT+ +I AR L PV V+ VG + + + L+ RT L L P
Sbjct: 187 ATLNDEIHRLARKYLREPVVVDLVGEGKSQAAQSVEHLKVKVGRTRTRVLADLLTVYNPE 246
Query: 435 PTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVAS 494
++F K++ D + L+ +G+E+ A+HG Q +R RA+ AFR G VLVATDVA+
Sbjct: 247 KAIVFTRTKREADELANELIHRGIESEALHGDLAQSQRERALGAFRSGRVGVLVATDVAA 306
Query: 495 KGLDFANIQHVINYDMPEDIENYVHR 520
+GLD + V+ Y +P+D E+YVHR
Sbjct: 307 RGLDIPEVDLVVQYHLPQDPESYVHR 332
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 214 bits (523), Expect = 5e-54
Identities = 121/340 (35%), Positives = 181/340 (53%), Gaps = 13/340 (3%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPI 240
+ +F M P + + L+ PTP+Q Q +P L G+D++G A TG+GKTL F +P+
Sbjct: 1 MNSFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPL 60
Query: 241 IMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIG 300
I L + L+I P+RELA+Q + + I L L S ++ L IG
Sbjct: 61 IAKLLGEP--------NASTALVIVPTRELAQQ----VTNEIGKLLLKNSV-LKIALLIG 107
Query: 301 GVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVR 360
G + + +Q+ I++ TPGR++D +++K + N L +DE DRM DMGF +
Sbjct: 108 GEPIFRQLNQLQRRPRIVIGTPGRIIDHIERKTLITNNVSTLVLDEVDRMFDMGFGIQIE 167
Query: 361 TIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEA 420
I Y RQ L+FSAT+P I A +P V+V S+ ++Q++ A
Sbjct: 168 GIMKYLPKMRQNLMFSATLPGDIVKLAEKYSNQPERVSVENEATTSVKIKQEIIYASESE 227
Query: 421 RTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
+ +L+ L + ++F KQ D + L A+AIHG Q +R R + +FR
Sbjct: 228 KYGKLVTQLYQRKGSIIVFVRTKQRADQLAYKLRKDNHSALAIHGDLKQRKRKRVINSFR 287
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHR 520
RG ++VATDVAS+GLD +IQHVINYD PE NY+HR
Sbjct: 288 RGHNQIMVATDVASRGLDIPHIQHVINYDAPESQANYIHR 327
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 214 bits (523), Expect = 5e-54
Identities = 117/339 (34%), Positives = 189/339 (55%), Gaps = 14/339 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + P +LR +E +G ++P+PIQ Q +P +L G+D++G+A TG+GKT FTLP++
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
+ EV+ P + L++ P+RELA+Q ++ + +H ++ GG
Sbjct: 68 T-QNEVREPQV-------LVLAPTRELAQQVAMAVESYSKH-----ESNVKVASIYGGSD 114
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+++G +V TPGR+MD + + ++L R + +DEAD M+ MGF +DV +
Sbjct: 115 FGSQFRALKQGPQWVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVL 174
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
+RQ LFSATMPK+I+ A L P + + A + ++ Q + +
Sbjct: 175 DQVPEKRQIALFSATMPKQIKAVAEKHLREPTEIRIKSKTATNESIEQKYWLVKGVDKNQ 234
Query: 424 QLLH-CLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG 482
LL C ++F KQ + V +Y+ G+ A++G Q +R RAV+ ++G
Sbjct: 235 ALLRICETSEFDAMMVFVRTKQATEEVADYMRSHGLRCEALNGDVAQAQRERAVDRLKKG 294
Query: 483 EKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ D+LVATDVA++GLD I HV+NYD+P D E+YVHRI
Sbjct: 295 QVDMLVATDVAARGLDVERISHVVNYDIPYDAESYVHRI 333
>UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Polynucleobacter sp. QLW-P1DMWA-1
Length = 500
Score = 214 bits (523), Expect = 5e-54
Identities = 125/353 (35%), Positives = 188/353 (53%), Gaps = 9/353 (2%)
Query: 172 VEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSG 231
+E D FQ+ +L+ + G + T +Q Q +PA L G D++ + TGSG
Sbjct: 9 IESKDSKSTGTEFQNFALAASLLKNVAELGFTQATSVQAQVIPAALAGGDLLVSSQTGSG 68
Query: 232 KTLVFTLPIIMFCLEQEVK-MPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGS 290
KT F LP+I +E P P L++CP+RELA+Q + +R +K
Sbjct: 69 KTAAFLLPLINQLIEDNPNNSPVPGRAQPKVLVLCPTRELAQQVAADAVNLVRGMK---- 124
Query: 291 PEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRM 350
IR +GG+ + ++ + KG ++VATPGRL+D+ D K +RL+ + L +DEADRM
Sbjct: 125 -GIRIATVMGGMPYGKQIQAL-KGALLVVATPGRLLDLCDSKAIRLDDVKQLVIDEADRM 182
Query: 351 IDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVR 410
+DMGF +D+ I AG+ QTL+FSAT KI + A + + AG +
Sbjct: 183 LDMGFADDLEAIDKRCAGRNQTLMFSATFAPKIMSLANELTTDAKRIELAHAGEKHANIE 242
Query: 411 QDLEPAQPEARTVQLL-HCL-QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKD 468
Q L A + +LL H L T ++FA + + + + + L G EA A+HG
Sbjct: 243 QKLHWADSMSHKHKLLEHILADATLDQAVVFASTQVESEKIADTLRANGYEASALHGAMP 302
Query: 469 QEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
Q R R +E+ R+G +LVATDVA++G+D I HVIN+ +P E+Y HRI
Sbjct: 303 QAVRMRRLESLRKGHTKILVATDVAARGIDVPRISHVINFGLPMKPEDYTHRI 355
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 214 bits (523), Expect = 5e-54
Identities = 126/390 (32%), Positives = 218/390 (55%), Gaps = 24/390 (6%)
Query: 167 KLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIA 226
KL+ +VE + P TF+ + + +L+ ++ G +PTPIQ + +P LNG+D++ A
Sbjct: 180 KLKKIVEEELP-----TFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASA 234
Query: 227 FTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLK 286
TGSGKT F LP++ L ++ + IR LI+ P+RELA Q ++++ +
Sbjct: 235 STGSGKTAAFLLPVLERLLFRDSEYRAIRV-----LILLPTRELALQCQSVMENLAQFSN 289
Query: 287 LTGSPEIRSCLAIGGVAVSECMEV-VQKGVHIMVATPGRLMD-MLDKKMVRLNVCRYLCM 344
+T SCL +GG++ ++ EV ++K +++ATPGRL+D +L+ + L+ L +
Sbjct: 290 IT------SCLIVGGLS-NKAQEVELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILIL 342
Query: 345 DEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGA 404
DEADR++DMGF++++ I RQT+LFSAT+ +++ A+ +L +P+ V V
Sbjct: 343 DEADRLLDMGFKDEINKIVESCPTNRQTMLFSATLNDEVKTLAKLSLQQPIRVQVDALMQ 402
Query: 405 ASLTVRQDLEPAQPEA---RTVQLLHCLQKT--PPPTLIFAERKQDVDAVHEYLLLKGVE 459
+ T+ Q+ +P+ R LL + T+IF K++V + L ++
Sbjct: 403 VTSTLEQEFVKIKPQHLSDRPAILLSLCTRVFNQGGTIIFCRSKKEVHRLRIIFGLSDLK 462
Query: 460 AVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVH 519
A +HG QE+R +++ FR G+ + L+A+DVAS+GLD ++ VINY+MP ++ NY+H
Sbjct: 463 AAELHGNLSQEQRFDSLQQFRDGQVNYLLASDVASRGLDIIGVKTVINYNMPNNMANYIH 522
Query: 520 RIXXXXXXXXXXXXXXXXXXPDHSVLRDLV 549
R+ D +L+D+V
Sbjct: 523 RVGRTARAGMDGKSCSFITDNDRKLLKDIV 552
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 214 bits (522), Expect = 7e-54
Identities = 128/341 (37%), Positives = 189/341 (55%), Gaps = 12/341 (3%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F + IL+ LE + P PIQ Q +PA+L G+D++GIA TGSGKT F LPI+
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQ 69
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
+ P +N L++ P+RELA Q + Q F L +I+S GGV
Sbjct: 70 MLQTK----PLGKNRHINALVLVPTRELAVQVGQVFQAFSNALP----NKIKSLAVYGGV 121
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
+++ M +Q GV I++ATPGRL+D++D K V L+ L +DEAD+M+++GF+E++ I
Sbjct: 122 SINPQMIQLQ-GVEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLNLGFKEEMANI 180
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
F +RQ LLFSAT+ K + L PV + + A ++ + Q + A +AR
Sbjct: 181 FKLLPQKRQNLLFSATLGKDVDTITEFLLHDPVKIEI-IAEEQNIDLIQQIAYAVEDARK 239
Query: 423 VQLLHCLQKTPP--PTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
LL L K LIF DAV E L + A A+H K Q R+ A++ F+
Sbjct: 240 GPLLRYLIKEQKMNQVLIFTSSVHRADAVVEKLKANNILAAALHSKKSQGARTEALKQFK 299
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
G VLVATD+ S+G+D + VINY++P ++Y+HRI
Sbjct: 300 AGNIHVLVATDLMSRGIDIPFLPFVINYELPRSPKDYIHRI 340
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 213 bits (521), Expect = 9e-54
Identities = 129/384 (33%), Positives = 202/384 (52%), Gaps = 16/384 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F+ F ILR + G Q TP+Q Q +PA+ G D++ A TG+GKT F LPI+
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAI-GGV 302
E+ + +++ LI+ P+RELA Q D I + +H+ + S L I GG+
Sbjct: 63 MHERPMT---VQHSNARALILTPTRELAAQVADNISAYSKHMNI-------SVLTIYGGM 112
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++ + +++G I+VATPGRL++ + + L+ +L +DEADRM+DMGF D++ I
Sbjct: 113 KMATQAQKLKQGADIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFSTDIQKI 172
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
+RQ LLFSAT ++ A L +P ++ + + TV Q + P + + R
Sbjct: 173 LQAVNKKRQNLLFSATFSTAVKKLANDMLDKPKIISADKQNTTAATVSQVVYPVE-QRRK 231
Query: 423 VQLLHCL--QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
+LL L K L+F + D D + L L G+ + +HG K Q R RA+ F
Sbjct: 232 RELLSELIGTKNWQQVLVFTATRADADKLVTELNLDGIPSAVVHGEKAQGSRRRALREFI 291
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXP 540
G+ VLVAT+VA++GLD +++V+NYD+P E+YVHRI
Sbjct: 292 EGKVRVLVATEVAARGLDIQGLEYVVNYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSRE 351
Query: 541 DHSVLRDLVHLLREAGQR--VPGF 562
+ L D+ L+ + +R VPG+
Sbjct: 352 EERTLADIEKLIGQKIRRITVPGY 375
>UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat).
ROK1-like protein; n=2; Dictyostelium discoideum|Rep:
Similar to Rattus norvegicus (Rat). ROK1-like protein -
Dictyostelium discoideum (Slime mold)
Length = 668
Score = 213 bits (521), Expect = 9e-54
Identities = 128/409 (31%), Positives = 215/409 (52%), Gaps = 20/409 (4%)
Query: 165 RNKLRILVEGDDPPPPIRTFQHM----KFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGR 220
RNK RI V+G D P P+ F + K K +L + G ++P+PIQ+Q +P +L R
Sbjct: 178 RNKHRIKVDGTDIPDPMTEFSQLENRFKVRKYLLNNINEIGYKEPSPIQMQVIPILLKER 237
Query: 221 DMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQH 280
+++ IA TGSGKT F++PI+ E + EG +II P+RELA+Q I ++
Sbjct: 238 EVVAIAPTGSGKTASFSIPILQALYEP-------KKEGFRSVIIAPTRELAQQ---IYRN 287
Query: 281 FIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCR 340
F L G P R C+ + E + K I++ TP RL+ ++ + ++ LN
Sbjct: 288 F--RLLSKGKP-FRICVLSKNLHNQSTNENLIKNYDILITTPLRLVYLIKENLLSLNKVE 344
Query: 341 YLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTL-LFSATMPKKIQNFARSALVRPVTVNV 399
YL DEAD++ D F+E V + + + + LFSATM ++++ S + P+ + +
Sbjct: 345 YLVFDEADKLFDKNFQEQVDIVVTACQNPKLKICLFSATMNQQVEELGHSIMKNPIKIII 404
Query: 400 GRAGAASLTVRQDL-EPAQPEARTVQLLHCLQK-TPPPTLIFAERKQDVDAVHEYLLLKG 457
G AA++TV Q L + E + + + +QK PP LIF + K+ + + L+ G
Sbjct: 405 GEQNAAAITVDQKLIYVGKEEGKLLAVRQLIQKGLEPPILIFTQSKERAHDLFQELIFDG 464
Query: 458 VEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENY 517
+ IH + Q +R V+ FR G+ VL+ T++ ++G+DF + VIN+D P + +Y
Sbjct: 465 INVDVIHSERTQFQRDTIVKKFRMGKIWVLICTELMARGMDFKGVNFVINFDFPHTLASY 524
Query: 518 VHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
+HRI D +L +VH ++++G VP ++L++
Sbjct: 525 IHRIGRTGRAGRPGVAYTLYTDADTPMLPTIVHAMKQSGSHVPDWMLNL 573
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 213 bits (520), Expect = 1e-53
Identities = 129/346 (37%), Positives = 192/346 (55%), Gaps = 20/346 (5%)
Query: 180 PIR--TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFT 237
P+R TFQ M +L L I KPTP+Q Q +PA L+G D+I IA TGSGKTL F
Sbjct: 29 PVRAHTFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFA 88
Query: 238 LPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCL 297
L + L K P R GLI+ PSRE+A+Q + + L+L + CL
Sbjct: 89 LSL----LTTLQKKPEAR-----GLILVPSREMAQQIYKVF------LELCAEMPVSVCL 133
Query: 298 AIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEE 357
AIGG S+ ++K +++ATPGR+ D L + L + +DEADRM+DMGF
Sbjct: 134 AIGGTTGSKQANQLKKNPRLIIATPGRMNDHLSGNKLLLQNVEVIVLDEADRMLDMGFAP 193
Query: 358 DVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRP--VTVNVGRAGAASLTVRQDLEP 415
+RTI S G RQT++FSA+ +++ A+ ++P V V +A A +++Q +
Sbjct: 194 QLRTIQSTLRGPRQTMMFSASFGSNVESIAQ-LFMKPDVVMVRSEKAEAPVESLKQKVLF 252
Query: 416 AQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRA 475
+ +LL L T ++F +++ +AV YL G IHGG Q +R+R
Sbjct: 253 LDRSMKNDRLLDELNATRGGVIVFTGNQENCEAVGNYLKEYGFSTDLIHGGLSQGQRNRV 312
Query: 476 VEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
V FR GE ++VATD+ ++GLD ++ HV+N+D+P E+++HRI
Sbjct: 313 VRGFREGEIRIVVATDLLARGLDVPHVDHVVNFDLPFQSEDFLHRI 358
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 213 bits (520), Expect = 1e-53
Identities = 121/330 (36%), Positives = 191/330 (57%), Gaps = 10/330 (3%)
Query: 193 ILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMP 252
+LR L+ Q PTP+Q + +PAVL G+D++ A TG+GKT F LP++ ++ P
Sbjct: 12 LLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQRLVQHG---P 68
Query: 253 FIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQ 312
+ + L++ P+RELA+Q ++Q FI + K ++R A GGV+++ M ++
Sbjct: 69 AVSSNRARVLVLVPTRELAEQ---VLQSFIAYGK---GLDLRFLAAYGGVSINPQMMKLR 122
Query: 313 KGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQT 372
KGV ++VATPGRL+D+ + V+ + + L +DEADRM+D+GF ++ +F+ QRQT
Sbjct: 123 KGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAQRQT 182
Query: 373 LLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKT 432
LLFSAT I+ A + L PV ++V A + ++Q + + +H + +
Sbjct: 183 LLFSATFSDDIRAMAATILRGPVNISVSPPNATASKIKQWVVTVDKRNKPDLFMHLVAEN 242
Query: 433 P-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATD 491
L+F + + VD + L G IHG K Q R RA+E F+ GE +LVATD
Sbjct: 243 KWEHALVFVKTRNGVDYLAAMLDEAGYAVDTIHGDKPQPARLRALERFKTGEVQMLVATD 302
Query: 492 VASKGLDFANIQHVINYDMPEDIENYVHRI 521
VA++GLD ++ VIN D+P ++YVHRI
Sbjct: 303 VAARGLDIDDLPLVINVDLPIVAQDYVHRI 332
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 213 bits (520), Expect = 1e-53
Identities = 140/432 (32%), Positives = 217/432 (50%), Gaps = 47/432 (10%)
Query: 170 ILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTG 229
I + G D P PI + + P + L KPT IQ Q +PAV++GRD+I +A TG
Sbjct: 366 IKIRGKDCPKPISKWTQLGLPGPTMGVLNDLRYDKPTSIQAQAIPAVMSGRDVISVAKTG 425
Query: 230 SGKTLVFTLPIIMFC-----LEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRH 284
SGKTL F LP++ +E + P G+II P+REL Q + ++ F+
Sbjct: 426 SGKTLAFLLPMLRHIKHRVGVETHTTTLSGASSHPLGVIITPTRELCVQIYRDLRPFLAA 485
Query: 285 LKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDML---DKKMVRLNVCRY 341
L+LT + A GG + + + ++KG HI+V TPGR++D+L +++ L+ +
Sbjct: 486 LELT------AVCAYGGSPIKDQIAALKKGTHIIVCTPGRMIDLLAANQGRVLSLSRVTF 539
Query: 342 LCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVR-------P 394
L +DEADRM DMGFE V + RQT+LFSAT PKK++ AR L + P
Sbjct: 540 LVIDEADRMFDMGFEPQVLKLTQSIRPDRQTVLFSATFPKKMEQLARRVLSKRSSDSLGP 599
Query: 395 VTVNVGRAGAASLTVRQDLEPAQPE-ARTVQLLHCLQK---------------------- 431
+ + VG + + Q +E Q E ++ +LL L K
Sbjct: 600 IEIIVGARSVVASEITQFVEVFQNEKSKFPRLLEVLGKYFAQGFFDEQSEGRVGTGESAA 659
Query: 432 TP---PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLV 488
TP P LIF ER++ D++ + L+ G ++IHGGK+Q +R +A+ F+ G VL+
Sbjct: 660 TPIPNPKCLIFVERQESADSLLKELIQSGYPCLSIHGGKEQADRDQAISDFKSGLVSVLI 719
Query: 489 ATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDL 548
AT VA++GLD + V+N+D P +E+YVHR+ + ++
Sbjct: 720 ATSVAARGLDVKGLGLVVNWDSPNHMEDYVHRVGRTGRAGQKGTALTFLLSDQERLAAEI 779
Query: 549 VHLLREAGQRVP 560
++ +G P
Sbjct: 780 SRAIKSSGNAPP 791
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 213 bits (519), Expect = 2e-53
Identities = 128/378 (33%), Positives = 194/378 (51%), Gaps = 14/378 (3%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TF + P IL LE G + P+ IQ + +PA+L GRD++G A TG+GKT F LP++
Sbjct: 10 TFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLLS 69
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
++ R E P L++ P+RELA+Q + R +K G + C GG
Sbjct: 70 -------RLDLQRRE-PQVLVLAPTRELAQQVAASFVQYGRGVK--GLEVLSLC---GGQ 116
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
E + +++G ++V TPGR++D LD+ ++L+ L +DEAD M+ MGF +DV+ +
Sbjct: 117 EYREQLSGLRRGAQVIVGTPGRVIDHLDRGSLKLDGLNALVLDEADEMLRMGFIDDVKRV 176
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
S Q + FSAT+P +I LV P+ + + + + Q L + A+
Sbjct: 177 VSDTPKDAQRVFFSATLPDEISRIVNHYLVDPLRIAIETKTKTAEGIEQRLVRIEGGAKL 236
Query: 423 VQLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L L+ P ++F + + E LLL+GV A A+ G DQ R R VE +R
Sbjct: 237 EALSRLLEVEPVDAAIVFVRTRAACTTLVEQLLLRGVNAAALSGDLDQSLRERTVERLKR 296
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPD 541
G+ DVL+ATDVA++GLD I HV NYD+P+D E Y HRI +
Sbjct: 297 GKVDVLIATDVAARGLDVPRITHVFNYDLPQDAEAYTHRIGRTGRAGRTGVAITFAGGRE 356
Query: 542 HSVLRDLVHLLREAGQRV 559
+RD+ + + Q V
Sbjct: 357 QRRVRDMERVTGQQMQEV 374
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 212 bits (517), Expect = 3e-53
Identities = 154/438 (35%), Positives = 218/438 (49%), Gaps = 37/438 (8%)
Query: 156 LPETRHEMIRNKLRILVEGDDPPP--PIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGM 213
LPE+ E + I+++ PI F + I + A PTPIQ
Sbjct: 152 LPESEIETFLKEKEIVIKDPSSSNLRPIMNFSQLPQSNLISKNPFA-AYTNPTPIQSASW 210
Query: 214 PAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFI---RNEGPYGLIICPSREL 270
P L+GRD+IGIA TGSGKT+ F+LP + L K F R P +I+ P+REL
Sbjct: 211 PFSLSGRDVIGIAETGSGKTMAFSLPCVE-SLASRPKPKFNSRDRTAHPRAVIVSPTREL 269
Query: 271 AKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQK--GVHIMVATPGRLMDM 328
A QTH + L G + C+ GG +E ++ K GV I+ ATPGRL D
Sbjct: 270 AMQTHAALSGLA---SLVGLSAV--CI-FGGSDKNEQRNLLYKNNGVDIITATPGRLKDF 323
Query: 329 LDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAG--QRQTLLFSATMPKKIQNF 386
L + + L + +DEADRM+D GF ED++ I S QRQTL+F+AT P IQ
Sbjct: 324 LSEGSISLANVSFAVLDEADRMLDRGFSEDIKLILSGCPPKEQRQTLMFTATWPLDIQKL 383
Query: 387 ARSALVRPVTVNVG---RAGA-----------ASLTVRQDLEPAQPEARTVQLLHCLQKT 432
A S ++ P V +G RAG A+ + Q +E P + +L L++
Sbjct: 384 AESYMINPAQVTIGHRTRAGGDGEGNGNIELQANSRIEQKVEVVDPRGKEFRLYELLKEA 443
Query: 433 PPPT------LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDV 486
+ L+F K++ V ++L KG++ +IHG Q++R+R++EAF+ G V
Sbjct: 444 QKGSQKDDRILVFCLYKKEAVRVEQFLSRKGIKVASIHGDLRQDQRTRSLEAFKSGTTTV 503
Query: 487 LVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLR 546
LVATDVA++GLD ++ VIN P IE+YVHRI D +
Sbjct: 504 LVATDVAARGLDIPEVKLVINVTFPLTIEDYVHRIGRTGRAGKLGKAITLFTEHDKAHSG 563
Query: 547 DLVHLLREAGQRVPGFLL 564
LV++LR A Q VP LL
Sbjct: 564 SLVNILRAAKQPVPEELL 581
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 211 bits (516), Expect = 4e-53
Identities = 118/339 (34%), Positives = 187/339 (55%), Gaps = 14/339 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + +++ + G + P+PIQ +PA+L GRD++G A TG+GKT F LP++
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
+ +VK P L++ P+RELA Q + Q + ++G R GG +
Sbjct: 77 TVLNQVK--------PQVLVLAPTRELAIQVAEAFQRYAA--SISG---FRVLPVYGGQS 123
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+ + +++GVH++V TPGR++D L++ + L+ + L +DEAD M+ MGF EDV +
Sbjct: 124 YGQQLAALKRGVHVIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVEEVL 183
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
RQ LFSATMP +I+ A++ L P+ V + + +RQ +
Sbjct: 184 RKLPASRQVALFSATMPPQIRRIAQTYLQDPIEVTIATKTTTAANIRQRYWWVSGLHKLD 243
Query: 424 QLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG 482
L L+ +T +IF K + + E L +G+ A AI+G Q +R R + + G
Sbjct: 244 ALTRILEVETFDAMIIFVRTKAATEELAEKLQARGLTAAAINGDMQQAQRERTIHQLKDG 303
Query: 483 EKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ D+LVATDVA++GLD I HV+NYD+P D+E+YVHRI
Sbjct: 304 KLDILVATDVAARGLDVERISHVLNYDIPYDVESYVHRI 342
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 211 bits (516), Expect = 4e-53
Identities = 120/363 (33%), Positives = 194/363 (53%), Gaps = 9/363 (2%)
Query: 187 MKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLE 246
+K I + L A+G + TPIQ + +P +L G D++G A TG+GKT F +PI+
Sbjct: 6 LKIINPIQKALAAQGYSEATPIQAEAIPHLLEGLDLLGCAQTGTGKTAAFAIPILQSLAM 65
Query: 247 QEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSE 306
+ + R L++ P+RELA Q + + +L L R+ + GGV +
Sbjct: 66 GQGLLKGKRQIR--ALVLAPTRELATQIAESFTAYGVNLPL------RTLVIFGGVGQAP 117
Query: 307 CMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYF 366
++KG+ I+VATPGRL+D++++ + L+ + +DE D+M+DMG DV+ I +Y
Sbjct: 118 QTRKLEKGIDILVATPGRLLDLINQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYL 177
Query: 367 AGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLL 426
+RQ +LFSATMP +I+ A + L PV + + + + Q++ + L
Sbjct: 178 PRERQNMLFSATMPVEIEKLADTILKGPVKIAMTPEFSPLDIIEQEVYFVDKANKAALLT 237
Query: 427 HCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKD 485
+ L+ L+F+ K D + + L KG AVAIHG K Q R +A+ AF++ +
Sbjct: 238 YWLKNNEYDSVLVFSRTKHGADKIVKELNKKGFTAVAIHGNKSQANREQALHAFKKRKTR 297
Query: 486 VLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVL 545
+LVATD+A++GLD + HVINY++PE E Y+HRI + +L
Sbjct: 298 ILVATDIAARGLDIQELSHVINYNLPEVPETYIHRIGRTGRAGLGGKAITFCDFEEKPLL 357
Query: 546 RDL 548
RD+
Sbjct: 358 RDI 360
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 211 bits (516), Expect = 4e-53
Identities = 119/340 (35%), Positives = 187/340 (55%), Gaps = 15/340 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TF+ + +L+ +E+ G ++ TPIQ + +P L G+D+IG A TG+GKT F LP++
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLL- 61
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
+V E G++I P+RELA Q + + +H + +R GG
Sbjct: 62 ----DKVDT---HKESVQGIVIAPTRELAIQVGEELYKIGKHKR------VRILPIYGGQ 108
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++ + ++K HI+V TPGR++D +++K +RL + +DEAD M++MGF ED+ I
Sbjct: 109 DINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAI 168
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
+ QTLLFSATMP I+ A + P + V ++Q Q + +
Sbjct: 169 LTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKF 228
Query: 423 VQLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L L ++P ++F K+ VD + E L L+G A IHG Q +R + F+
Sbjct: 229 DVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKE 288
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
G +VLVATDVA++GLD + + HV N+D+P+D E+YVHRI
Sbjct: 289 GSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRI 328
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 211 bits (516), Expect = 4e-53
Identities = 137/398 (34%), Positives = 200/398 (50%), Gaps = 20/398 (5%)
Query: 158 ETRHEMIRNKLRILVEGDDPPPPIRT----FQHMKFPKGILRGLEAKGIQKPTPIQVQGM 213
E E I K EGD + T FQ M + IL+GL G + PT IQ + +
Sbjct: 231 EEDEEEIAKKNAFFAEGDKEKSMMTTTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTI 290
Query: 214 PAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQ 273
P L G+D++G A TGSGKT F +PI+ L + K+P R LI+CP+RELA Q
Sbjct: 291 PLALLGKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTRV-----LILCPTRELAMQ 345
Query: 274 THDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMD-MLDKK 332
H + K+ +I CL IGG+++ + ++K I++ATPGR +D M + +
Sbjct: 346 CHSVAT------KIASFTDIMVCLCIGGLSLKLQEQELRKRPDIVIATPGRFIDHMRNSQ 399
Query: 333 MVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALV 392
+ + MDEADRM++ GF +++ I RQT+LFSATM K+ + R +L
Sbjct: 400 GFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQTMLFSATMTDKVDDLIRLSLN 459
Query: 393 RPVTVNVGRAGAASLTVRQDLEPAQPEA---RTVQLLH-CLQKTPPPTLIFAERKQDVDA 448
RPV V V + + Q+ +P+ R L++ C + T+IF K
Sbjct: 460 RPVRVFVDNKKTTAKLLTQEFVRVRPQRELLRPAMLIYLCKELFHRRTIIFFRSKAFAHK 519
Query: 449 VHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINY 508
+ L + A IHG QE+R RA+E FR G+ + L+ATDVAS+G+D I+ VINY
Sbjct: 520 MRVIFGLLSLNATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINY 579
Query: 509 DMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLR 546
+ P E Y+HR+ D VL+
Sbjct: 580 EAPATHEVYLHRVGRTARAGRSGRAITLAGEGDRKVLK 617
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 211 bits (515), Expect = 5e-53
Identities = 129/356 (36%), Positives = 192/356 (53%), Gaps = 25/356 (7%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + +LR +E G PTP+Q +P VL GRD++ A TG+GKT F LP M
Sbjct: 48 FDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQTGTGKTAAFLLPT-MN 106
Query: 244 CLE-----------------QEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLK 286
LE + K P GP L+I P+RELA+Q ++
Sbjct: 107 NLEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPVMLVITPTRELAQQIDEVAGKIA---D 163
Query: 287 LTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDE 346
+TG + +GGV+ ++ G I+VATPGRL+D++++ L+ + L +DE
Sbjct: 164 VTGHVAVT---VVGGVSYKPQTAALKYGCDILVATPGRLVDLIEQGACHLDEVKVLVLDE 220
Query: 347 ADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAAS 406
ADRM+DMGF VR I +RQTLLFSAT+ ++ + P V + A + +
Sbjct: 221 ADRMLDMGFLPAVRRIVRETPAERQTLLFSATLDEEAVGEITDLVSDPARVEIAPATSTA 280
Query: 407 LTVRQDLEPAQPEARTVQLLHCLQKTPPP-TLIFAERKQDVDAVHEYLLLKGVEAVAIHG 465
TV Q + P EA+ L L+K P T++F K D+ L KG++A AIHG
Sbjct: 281 DTVDQFVFPVSIEAKNNLLPEFLKKEGPERTIVFMRTKHRADSCCRRLERKGIKAAAIHG 340
Query: 466 GKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ Q +R RA+ AFR G DVLVATDV ++G+D +++++V+N+D+P + +Y+HRI
Sbjct: 341 NRSQAQRERALSAFRDGTVDVLVATDVLARGIDISDVRYVVNFDVPAEPTDYIHRI 396
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 210 bits (514), Expect = 6e-53
Identities = 132/370 (35%), Positives = 210/370 (56%), Gaps = 27/370 (7%)
Query: 166 NKLRILVEGDDPPPPIRTFQHMK-FPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIG 224
N + I+ +G+ I+ F K FP G Q+PT IQ + +P VL+GR+ +
Sbjct: 48 NNITIVRDGEQDNDIIQPFLDWKHFPLG------PPEFQQPTAIQSEVIPIVLSGRNALA 101
Query: 225 IAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHD----IIQH 280
IA TGSGKTL + LP ++ LEQ + + + P LI+ P+REL Q +D +I+
Sbjct: 102 IAQTGSGKTLAYLLPALVH-LEQHAMI--MESPQPKLLILVPTRELGVQIYDQLLQLIEF 158
Query: 281 FIRHLKLT---GSPEIRS----CLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKM 333
+ + K SP + + C+ G + +E++QKG+H++VATPGRL++++D+ M
Sbjct: 159 YYGNKKQNEKENSPNLTNLKIVCIYGGNPNKKQQVELIQKGIHVIVATPGRLIELIDEGM 218
Query: 334 VRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVR 393
V LN L +DEADRM+DMGFE VR I S RQT+L SAT P ++Q ++
Sbjct: 219 VNLNKITMLILDEADRMLDMGFEPQVRDIVSTIREDRQTILLSATWPNEVQQLSKEFCYD 278
Query: 394 PVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKT--PPPTLIFAERKQDVDAVHE 451
P+ V +G+ A +T ++ + Q E V L++ L LIFAE K+ + + +
Sbjct: 279 PILVKIGK--GAPIT-QKIICTGQKEKLHV-LMNVLDDLIYTDKVLIFAETKKRCEDLSQ 334
Query: 452 YLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMP 511
L +G +++HG K Q++R ++ F+ ++ ATD+AS+GLD +I V+NYD P
Sbjct: 335 SLTKQGYFCISLHGDKSQDQRDAIMKQFKDSNTRLICATDIASRGLDVKDITVVVNYDFP 394
Query: 512 EDIENYVHRI 521
+ ++Y+HRI
Sbjct: 395 KSFDDYIHRI 404
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 210 bits (513), Expect = 8e-53
Identities = 122/344 (35%), Positives = 185/344 (53%), Gaps = 14/344 (4%)
Query: 179 PPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTL 238
P F +K + +LR L+ G + P+PIQ +P +LN RD++G A TG+GKT F L
Sbjct: 4 PSFPLFADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFAL 63
Query: 239 PIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLA 298
PI+ ++ I+ P L++ P+RELA Q + Q + ++ P
Sbjct: 64 PIL-------ARID-IKQTTPQALVLAPTRELAIQVAEAFQRYATYI-----PGFHVLPI 110
Query: 299 IGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEED 358
GG + + +++GVH++V TPGR++D L+K + L+ + + +DEAD M+ MGF +D
Sbjct: 111 YGGQSYGAQLSALRRGVHVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDD 170
Query: 359 VRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQP 418
V TI RQT LFSATMP I+ A + L P + V + +RQ
Sbjct: 171 VETILQKTPESRQTALFSATMPSAIKRIATTYLRDPDLITVAAKTGTADNIRQRYWLVSG 230
Query: 419 EARTVQLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVE 477
+ L L+ + +IFA K + + L +G A AI+G Q++R R ++
Sbjct: 231 MQKLDALTRILEAENFDGMIIFARTKLGTEELASKLQARGFSAAAINGDIQQQQRERTIQ 290
Query: 478 AFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ G+ D+LVATDVA++GLD I HVINYD+P D E+Y HRI
Sbjct: 291 QLKDGKIDILVATDVAARGLDVERISHVINYDVPHDPESYTHRI 334
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 210 bits (513), Expect = 8e-53
Identities = 131/373 (35%), Positives = 203/373 (54%), Gaps = 13/373 (3%)
Query: 156 LPETRHEMIR-NKLRI-LVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGM 213
+PE + ++ N++ I ++G P P T+ +FP I ++ + PTPIQ
Sbjct: 72 MPEKVKDFLKANEIAIKAIDGQPCPYPFLTWGGTQFPPQIQNVIDGLNFRAPTPIQSVVF 131
Query: 214 PAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFI-RNEGPYGLIICPSRELAK 272
P +L+G D+IG+A TGSGKT + LP ++ Q F R GP LI+ P+REL
Sbjct: 132 PLILSGYDLIGVAETGSGKTFGYLLPGLIQIKCQNYGSNFRNRINGPEILILAPTRELVM 191
Query: 273 QTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKK 332
Q + F++ LT + A GG + + +++ I+VA PGRL D L +
Sbjct: 192 QIAQQVSLFMKPNNLTVAT------AYGGQNRDQQAQQIKRNPDILVACPGRLKDFLQEG 245
Query: 333 MVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALV 392
++ L+ YL +DEADR++DMGFE+DVR I RQT+ FSAT PK ++N +
Sbjct: 246 ILDLSKVTYLVIDEADRLLDMGFEDDVRFIVQRTRQDRQTVFFSATWPKAVRNLSLDFCA 305
Query: 393 R-PVTVNVGRAG-AASLTVRQDLEPAQPEARTVQLLHCLQ--KTPPPTLIFAERKQDVDA 448
P+ V VGR+ + + Q++ + LL L K LIFAE + +
Sbjct: 306 EDPIYVQVGRSNLTVNKNIDQEIICLYNNQKLQTLLDILDQLKINDKVLIFAETRISCEQ 365
Query: 449 VHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINY 508
+ + +G AVA+HG K Q +R +E +++G+ +L ATD+AS+GLD ++I VINY
Sbjct: 366 LSVDMTQEGYYAVALHGNKTQGQRDSIMECYKKGDTKLLCATDLASRGLDVSDITVVINY 425
Query: 509 DMPEDIENYVHRI 521
D P+ ++Y+HRI
Sbjct: 426 DFPKYFDDYIHRI 438
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 209 bits (510), Expect = 2e-52
Identities = 131/394 (33%), Positives = 196/394 (49%), Gaps = 18/394 (4%)
Query: 178 PPPIRTFQHMKFPKGILRG-LEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVF 236
PPP+ +F+ + G + G +KP+PIQ Q P +L+G+D IG++ TGSGKTL F
Sbjct: 79 PPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAF 138
Query: 237 TLPIIMFC---LEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEI 293
LP ++ L Q K + P+ L++ P+RELA+Q I+ ++ G +
Sbjct: 139 LLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQ----IEGEVKKYSYNGYKSV 194
Query: 294 RSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDM 353
CL GG + E +E + GV I++ATPGRL D+ + ++ L Y+ +DEADRM+DM
Sbjct: 195 --CL-YGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDM 251
Query: 354 GFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASL-TVRQD 412
GFE +R I R L SAT P+ ++ V G S +V Q
Sbjct: 252 GFEVAIRRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQF 311
Query: 413 LEPAQPEAR------TVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGG 466
E ++R V L +IF + K D + +KG+ + +HGG
Sbjct: 312 FEFVPHDSRFLRVCEIVNFLTAAHGQNYKMIIFVKSKVMADHLSSDFCMKGINSQGLHGG 371
Query: 467 KDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXX 526
+ Q +R ++ R GE +LVATD+AS+G+D +I HV+NYD P DIE YVHR+
Sbjct: 372 RSQSDREMSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGR 431
Query: 527 XXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVP 560
D S L+ +L ++ Q VP
Sbjct: 432 AGRKGEAMSFLWWNDRSNFEGLIQILEKSEQEVP 465
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 209 bits (510), Expect = 2e-52
Identities = 116/340 (34%), Positives = 186/340 (54%), Gaps = 15/340 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TFQ + + +++ +E G ++ TPIQ + +P L +D+IG A TG+GKT F +PI+
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIV- 61
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
++V ++N L++ P+RELA Q + + K+ +R GG
Sbjct: 62 ----EKVN---VKNSAVQALVVAPTRELAIQVSEELY------KIGAVKRVRVLPIYGGQ 108
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
+ + ++K H++V TPGR++D +++ +RL + +DEAD M++MGF ED+ I
Sbjct: 109 DIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAI 168
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
S+ +RQTLLFSATMP I+ A + P V V ++Q + +
Sbjct: 169 LSHVPAERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKF 228
Query: 423 VQLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L L + P ++F K+ VD + E L L+G A IHG Q +R + F+
Sbjct: 229 DILTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKE 288
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
G ++LVATDVA++GLD + + HV N+D+P+D E+YVHRI
Sbjct: 289 GAIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRI 328
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 208 bits (509), Expect = 3e-52
Identities = 134/389 (34%), Positives = 203/389 (52%), Gaps = 20/389 (5%)
Query: 143 IKTSWRPPRCILELPETRHEMIRNKL-RILVEGDDPPPPIRTFQHMKFPKGILRGLEAK- 200
IK ++ P I +L E +R L + V G D P PI + + GI+ L +
Sbjct: 196 IKNFYQEPEEISKLSEEEVADLRLSLDNVQVRGRDCPRPILKWSQLGLNSGIMNLLTREL 255
Query: 201 GIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNE-GP 259
PTPIQ Q +PA+++GRD+IGI+ TGSGKT+ F LP++ + + + P +E GP
Sbjct: 256 EFTVPTPIQAQAIPAIMSGRDVIGISKTGSGKTVSFILPLLR---QIKAQRPLGGDETGP 312
Query: 260 YGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMV 319
GLI+ P+RELA Q H+ + F +G P IRS GG + + +++GV I++
Sbjct: 313 LGLILSPTRELALQIHEEVTKFT-----SGDPSIRSLCCTGGSELKRQINDIKRGVEIVI 367
Query: 320 ATPGRLMDMLDKKMVRL-NVCR--YLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFS 376
ATPGR +D+L L N R ++ MDEADR+ D+GFE V I +Q +LFS
Sbjct: 368 ATPGRFIDLLSLNSGNLINPKRIVFVVMDEADRLFDLGFEPQVNQIMKCIRPDKQCVLFS 427
Query: 377 ATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEP-AQPEARTVQLLHCLQKT--- 432
AT P K+++FA L PV + V + + Q +E + E + L+H L T
Sbjct: 428 ATFPNKLKSFASKILHDPVYITVNSKSLINENIEQKVEIFSNEEDKFKSLIHWLALTQQN 487
Query: 433 --PPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVAT 490
T++F +Q D ++ L G AIH GK ER+ ++ F+ +L+ T
Sbjct: 488 LNDEKTIVFVSSQQICDILYNRLEANGFTTFAIHAGKIYTERAWNLKCFKETANGILICT 547
Query: 491 DVASKGLDFANIQHVINYDMPEDIENYVH 519
+V S+GL+ + VI Y+ + YVH
Sbjct: 548 EVLSRGLNVPEVSLVIIYNAAKTFAQYVH 576
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 208 bits (508), Expect = 3e-52
Identities = 123/369 (33%), Positives = 185/369 (50%), Gaps = 14/369 (3%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPI 240
+ +F+ + + +L+ +E G +P+PIQ +P +L GRD+IG A TG+GKT F LP+
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPL 63
Query: 241 IMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIG 300
+ Q + + L++CP+RELA Q + + +HL+ +R G
Sbjct: 64 L-----QRIDAA---DRSVQALVLCPTRELALQVANGLTALAKHLR-----GVRILSVYG 110
Query: 301 GVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVR 360
G + +++G ++V TPGR++D +++ ++L V R +DEAD M+DMGF ED+
Sbjct: 111 GQPIEPQASALRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIE 170
Query: 361 TIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEA 420
I S Q+ FSATMP I AR L P + V R Q +P
Sbjct: 171 RILSEMPEWVQSAFFSATMPDGILELARRFLREPELLRVTRRQLTVANTEQAWFEVRPFR 230
Query: 421 RTVQLLHCLQK-TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAF 479
R + P ++F KQ VD + L +G+ A A+HG +Q +R R + F
Sbjct: 231 RVDAVCRIFDAYIPRKAIVFRATKQGVDELAAALQQRGILADALHGDLNQTQRERVMSRF 290
Query: 480 RRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXX 539
R G VLVATDVA++GLD ++ VIN+D+P D E YVHRI
Sbjct: 291 RAGGISVLVATDVAARGLDVDDVDTVINFDLPNDPETYVHRIGRTGRAGRTGRAFSFAAG 350
Query: 540 PDHSVLRDL 548
D LRD+
Sbjct: 351 RDVYKLRDI 359
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 208 bits (507), Expect = 4e-52
Identities = 106/339 (31%), Positives = 187/339 (55%), Gaps = 11/339 (3%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F+ GI + L G +PT IQ + +P +L G D++ IA TG+GKT F +P+
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPV--- 59
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
L + + + L++ P+RELA Q ++ + K+ +R+ GGV
Sbjct: 60 -LNTLINVKKSEHTDISCLVMAPTRELAVQISEVFK------KIGAYTRLRTVCITGGVE 112
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+ G+ I+VATPGR+ D++ +K +++ + L +DEAD M+D+GF +D++ +
Sbjct: 113 QEAQIAAADYGIDILVATPGRMFDLIYQKHIKITRVKILVLDEADHMLDLGFIKDIQDVK 172
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
+ + QTL FSAT+ ++I+ A S + P+ + + S + + + +
Sbjct: 173 KFLPARHQTLFFSATINEEIKKLAYSLVKNPIRIQIAPKDRVSKNITHSVAFIGMDDKRF 232
Query: 424 QLLHCLQKTPPP-TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG 482
L L++ P ++F + D V + G+++V +HGGK+Q+ R A++AF+ G
Sbjct: 233 FLERLLKEHPESKVIVFVRTQVRADRVQAAMERVGLKSVTMHGGKEQQARDAAMDAFKNG 292
Query: 483 EKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
VL+ATD++++G+D A +++V+NYDMPE ENYVHR+
Sbjct: 293 TVHVLIATDISARGIDIAGVEYVVNYDMPEVAENYVHRV 331
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 208 bits (507), Expect = 4e-52
Identities = 125/378 (33%), Positives = 192/378 (50%), Gaps = 10/378 (2%)
Query: 176 DPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLV 235
D + F + + +LR + + + PTPIQ + +P +L G D++GIA TG+GKT
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 236 FTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRS 295
F LPI+ + P R L++ P+RELA Q D + + + + P +
Sbjct: 111 FVLPILHRIAANRAR-PAPR--ACRALVLAPTRELATQIADAARTYGKFTR----PSV-- 161
Query: 296 CLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGF 355
+ IGG ++ GV ++VATPGRL+D + ++RL+ + +DEAD+M+D+GF
Sbjct: 162 AVVIGGAKPGPQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGF 221
Query: 356 EEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEP 415
+R I + QRQ ++FSATMPK I+ A L P V V + Q +
Sbjct: 222 IPAIRQIMAKLPRQRQAVMFSATMPKPIRALAGEFLRDPREVAVSVESKPVDRIDQQVLL 281
Query: 416 AQPEARTVQLLHCLQKTPPP-TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSR 474
PE + +L L ++F K D V +L G+ A AIHG K Q +R R
Sbjct: 282 LAPEEKKDKLAWLLADVAVERAIVFTRTKHGADKVTRHLEDAGIGAAAIHGNKSQGQRER 341
Query: 475 AVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXX 534
A++ FR G VLVATD+A++G+D N+ HV+N+++P E+YVHRI
Sbjct: 342 ALDQFRSGRIRVLVATDIAARGIDVDNVSHVVNFELPNVPESYVHRIGRTARAGAEGVAI 401
Query: 535 XXXXXPDHSVLRDLVHLL 552
+ LRD+ L+
Sbjct: 402 SLVEPSELPYLRDIETLI 419
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 207 bits (506), Expect = 6e-52
Identities = 117/325 (36%), Positives = 180/325 (55%), Gaps = 9/325 (2%)
Query: 197 LEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRN 256
L + G ++PT IQ + +PAVL G D+I A TGSGKT F LP+ LE+ +P N
Sbjct: 16 LSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPL----LEKLHSIPAPGN 71
Query: 257 EGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVH 316
+ L++ P+RELA Q + + + +IRS GG A++ M+ + KG
Sbjct: 72 NLTHALVLVPTRELAVQVSQSVDRYSENCPR----KIRSVAIYGGAAINPQMQSLSKGCD 127
Query: 317 IMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFS 376
I+VATPGRL+D++ K + L + L +DEADRM+D+GF +++ I G QTLLFS
Sbjct: 128 IVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQTPGNVQTLLFS 187
Query: 377 ATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCL-QKTPPP 435
AT P K++ L PV ++V + + Q RT+ L H + Q+
Sbjct: 188 ATFPDKVKELTEELLRNPVEISVKQEATLPDQLHQRAIEVDRNNRTMLLKHLIKQEKWQQ 247
Query: 436 TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASK 495
LIF K+ + + L G+++ +HG Q+ER A+E F +G +L+ATD+A++
Sbjct: 248 LLIFVGSKRTANNIELKLYRSGIQSSTLHGDLTQKERLGALEDFSKGRCKILIATDLAAR 307
Query: 496 GLDFANIQHVINYDMPEDIENYVHR 520
G+D ++ V+NYD+P +YVHR
Sbjct: 308 GIDIPSLPCVLNYDLPRATSDYVHR 332
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 207 bits (506), Expect = 6e-52
Identities = 127/389 (32%), Positives = 199/389 (51%), Gaps = 16/389 (4%)
Query: 182 RTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPII 241
++FQ + ILRGL + G PTPIQ + +P L G+D++G A TGSGKT F +PI+
Sbjct: 305 KSFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIPIL 364
Query: 242 MFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGG 301
L + K+P R I+ P+RELA Q +++ KL +I C +GG
Sbjct: 365 ERLLYRPRKVPTSRVA-----ILMPTRELAVQCYNVAT------KLATFTDITFCQLVGG 413
Query: 302 VAVSECMEVVQKGVHIMVATPGRLMD-MLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVR 360
++ E +++K +++ATPGR +D M + ++ L +DEADRM++ GF +++
Sbjct: 414 FSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELN 473
Query: 361 TIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQD---LEPAQ 417
I + RQT+LFSATM + R L RPV + V T+ Q+ L P +
Sbjct: 474 EILTTIPKSRQTMLFSATMTNNVDKLIRVGLSRPVRLMVDAKKQTVGTLIQEFVRLRPGR 533
Query: 418 PEARTVQLLH-CLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAV 476
E R L+ C ++F K++ V L G++ +HG QE+R ++V
Sbjct: 534 EEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRIIFGLLGLKVTELHGSMSQEQRIKSV 593
Query: 477 EAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXX 536
E+FR G+ L+ATDVAS+GLD ++ VINY+ P+ Y+HR+
Sbjct: 594 ESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHAIYLHRVGRTARAGRSGRACTL 653
Query: 537 XXXPDHSVLRDLVHLLREAGQRVPGFLLD 565
PD V++ V R G ++ L++
Sbjct: 654 AAEPDRKVVKAAVKTGRAQGAKIVSRLIE 682
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 207 bits (506), Expect = 6e-52
Identities = 138/405 (34%), Positives = 206/405 (50%), Gaps = 24/405 (5%)
Query: 177 PPPPIRTFQHM--KFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTL 234
PP P+ F+ + K + + L+++G PTPIQ P +L +D++GIA TGSGKT
Sbjct: 152 PPLPMVDFRELDGKVDAAVKKTLDSQGFSTPTPIQACCWPVLLQNKDVVGIAETGSGKTF 211
Query: 235 VFTLPIIMFCLEQEVKMPFIRNEGPYG----LIICPSRELAKQTHDIIQHFIRHLKLTGS 290
F LP + + + + + + L+I P+RELA QT + + KL S
Sbjct: 212 AFGLPALQHLVTKHKVLDSGKKKAKGAQVNVLVIAPTRELAIQTEENMA------KLGKS 265
Query: 291 PEIRSCLAIGGVAVSECMEVVQKG--VHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEAD 348
I GGV+ E + ++ + V I+V TPGR++DM + L+ YL +DEAD
Sbjct: 266 MGIGMICLYGGVSKQEQVRLLNQSPPVRIVVGTPGRVLDMARDGSLDLSGVTYLVLDEAD 325
Query: 349 RMIDMGFEEDVRTIFSYFAGQ---RQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG-A 404
RM+D GFE D+R I + R T +FSAT P ++ A S + PV V VG +
Sbjct: 326 RMLDKGFEPDIRAIIGMCKSREEGRHTSMFSATWPPAVRGLAESFMNGPVRVTVGSDELS 385
Query: 405 ASLTVRQDLEPAQP----EARTVQLLHCL--QKTPPPTLIFAERKQDVDAVHEYLLLKGV 458
A+ V Q +E E R L + Q++ LIFA K++ + + L G
Sbjct: 386 ANRRVEQTVEVLADGYAKERRLNDFLRSVNAQRSKDKILIFALYKKEAQRIEQTLRRGGF 445
Query: 459 EAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYV 518
+ IHG Q ER ++E F+ E +LVATDVA++GLD N++HV+NY P IE+YV
Sbjct: 446 KVSGIHGDLGQNERIASLERFKSAETPLLVATDVAARGLDIPNVEHVVNYTFPLTIEDYV 505
Query: 519 HRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFL 563
HRI D + +L+ +L++A Q+VP L
Sbjct: 506 HRIGRTGRGGKTGKSLTFFTEMDKAHAGELIRVLKDADQKVPDAL 550
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 207 bits (505), Expect = 8e-52
Identities = 121/342 (35%), Positives = 178/342 (52%), Gaps = 14/342 (4%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPI 240
I F F + + LE P+PIQ Q +P +L GRD I +A TG+GKT F LPI
Sbjct: 5 ISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPI 64
Query: 241 IMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIG 300
+ L E+ LI+ P+RELA Q + + ++ + + + G
Sbjct: 65 LQN-LSPEISTT-------QALILAPTRELAIQVAEQFELLSKYQR-----NVTIAVLCG 111
Query: 301 GVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVR 360
G ++ ++ G ++V TPGR++D +DK + LN + +DEAD M+ MGF EDV
Sbjct: 112 GQEYGRQLKQLRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVE 171
Query: 361 TIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEA 420
TI ++Q LFSATMP +I+ A + L P ++ + A ++ Q A
Sbjct: 172 TILEKLPEKKQMALFSATMPYRIRQIANTYLNDPASIEIRMETATVKSIEQRFLFASVHQ 231
Query: 421 RTVQLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAF 479
+ L+ L+ + ++F K + V E L G+ A+AIHG Q R R + F
Sbjct: 232 KPDALIRVLEVEDYQGVIVFVRTKSSTEEVAELLQQHGLRAMAIHGDITQSLRERIIAQF 291
Query: 480 RRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
++G D+LVATDVA++GLD + HVINYDMP D E YVHRI
Sbjct: 292 KQGAIDILVATDVAARGLDVERVTHVINYDMPHDNETYVHRI 333
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 207 bits (505), Expect = 8e-52
Identities = 119/330 (36%), Positives = 175/330 (53%), Gaps = 7/330 (2%)
Query: 193 ILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMP 252
++ L A+G + PTPIQ +P L G D++ A TG+GKT F LP +
Sbjct: 40 LVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLERLKRYATAST 99
Query: 253 FIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQ 312
L++ P+RELA Q +Q +I++L L R + GG+ + + ++
Sbjct: 100 SPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPL------RHTVLFGGMNMDKQTADLR 153
Query: 313 KGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQT 372
G I+VAT GRL+D + +K + LN + +DEADRM+DMGF +D+R I QRQT
Sbjct: 154 AGCEIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPKQRQT 213
Query: 373 LLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQP-EARTVQLLHCLQK 431
LLFSAT I+ A+ + P TV V + V Q + + R + +
Sbjct: 214 LLFSATFSAPIRKLAQDFMNAPETVEVAAQNTTNANVEQHIIAVDTIQKRNLLERLIVDL 273
Query: 432 TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATD 491
++F + KQ VD V L+ + + A AIHG + Q+ R + AF+ G VLVATD
Sbjct: 274 HMNQVIVFCKTKQSVDRVTRELVRRNLSAQAIHGDRSQQSRLETLNAFKDGSLRVLVATD 333
Query: 492 VASKGLDFANIQHVINYDMPEDIENYVHRI 521
+A++GLD A + VINY+MP E+YVHRI
Sbjct: 334 IAARGLDIAELPFVINYEMPAQPEDYVHRI 363
>UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3;
Deltaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Desulfovibrio desulfuricans (strain G20)
Length = 530
Score = 206 bits (504), Expect = 1e-51
Identities = 129/398 (32%), Positives = 193/398 (48%), Gaps = 16/398 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPII- 241
+F ++ + A+G PTPIQ + +P L G+D++G+A TG+GKT F LP++
Sbjct: 57 SFARFSLHPALIEAVSARGFVNPTPIQEKALPPALAGQDILGLAATGTGKTAAFVLPLLH 116
Query: 242 MFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGG 301
L+ E +R L++ P+REL Q H+ ++ R +L RS GG
Sbjct: 117 RLLLQGESARGTLR-----ALVVAPTRELVAQIHEEVKTLARFCRL------RSATVYGG 165
Query: 302 VAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRT 361
V + ++ GV I++A PGRL+D + + L+ L +DEAD M DMGF DVR
Sbjct: 166 VGMHAQTVQLRTGVDIVLACPGRLLDHVRRGHADLSHVDMLVLDEADMMFDMGFLSDVRE 225
Query: 362 IFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEAR 421
I ++QT+LFSATMP ++ A L +PV + + A TVR L P +
Sbjct: 226 ILHCTRVRKQTMLFSATMPAPLRELAEECLRQPVRIELDTCAIAP-TVRHSLCPVPKHLK 284
Query: 422 TVQLLHCLQK-TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
T L + L+ L+F + + + L+ G+EA + G Q R A+E FR
Sbjct: 285 TPLLKYVLRAFARDSVLVFVRTRHGARRLWQQLVKSGIEATCLQGNLSQGRRRAALEGFR 344
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXP 540
RG V+VATD+A++G+D + + +VINYD P +E VHR
Sbjct: 345 RGTFRVMVATDIAARGIDVSQVGYVINYDFPPSVEACVHRAGRTGRASNSGVALTFVTQE 404
Query: 541 DHSVLRDLVHLLREAGQR--VPGFLLDMLGEPDVPAPA 576
D +R L +L A R GF L + PA
Sbjct: 405 DEPQVRTLERVLGGALSRWHAEGFDYSALQRTEAARPA 442
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 206 bits (504), Expect = 1e-51
Identities = 127/385 (32%), Positives = 197/385 (51%), Gaps = 17/385 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TFQ +++ + G ++ TPIQ Q +P L+ +D+IG A TG+GKT F +P++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAI-GG 301
+ + P I+ ++I P+RELA Q + L G + L I GG
Sbjct: 64 ---KINPESPNIQ-----AIVIAPTRELAIQVSE-------ELYKIGQDKRAKVLPIYGG 108
Query: 302 VAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRT 361
+ + ++K +I+V TPGRL+D ++++ +RLN + MDEAD M++MGF +D+ +
Sbjct: 109 QDIGRQIRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIES 168
Query: 362 IFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEAR 421
I S + QTLLFSATMP I+ A + P V V ++Q Q +
Sbjct: 169 ILSNVPSEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKK 228
Query: 422 TVQLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
L L ++P ++F K+ VD + E L L+G A IHG Q +R A+ F+
Sbjct: 229 FDTLTRLLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFK 288
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXP 540
G +VLVATDVA++GLD + + HV N+D+P+D E+YVHRI
Sbjct: 289 EGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPR 348
Query: 541 DHSVLRDLVHLLREAGQRVPGFLLD 565
+ S+LR + + R+ LD
Sbjct: 349 EKSMLRAIEQTTKRKMDRMKEPTLD 373
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 206 bits (503), Expect = 1e-51
Identities = 117/330 (35%), Positives = 190/330 (57%), Gaps = 17/330 (5%)
Query: 195 RGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFI 254
+ LE G ++PTPIQ +P L G D++G A TG+GKT F +PI+ + + P +
Sbjct: 13 KALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVE---KLQKGKPDV 69
Query: 255 RNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQ-K 313
+ L++ P+RELA Q + I ++ +L+ S + GG +V + ++++Q K
Sbjct: 70 K-----ALVLTPTRELAIQVKEQIYMLTKYKRLS------SYVFYGGTSVKQNLDILQNK 118
Query: 314 GVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTL 373
V I++ TPGR+ D++D+K + L+ YL +DE D+M+DMGF ED+ I S+ +R T
Sbjct: 119 NVDILIGTPGRIKDLIDRKALNLSKVEYLVLDEFDQMLDMGFIEDIEYIISFLPKERTTY 178
Query: 374 LFSATMPKKIQNFARSALVRPVT-VNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKT 432
+FSAT+P +I+ A+ L V V + ++ + P + +L+H +
Sbjct: 179 MFSATVPSRIELLAKRFLKSDFKFVKVQSVELKPNIEEKMIKLSSPGEKIHELMHIIDTH 238
Query: 433 P-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATD 491
P LIF + K+D + L KG+ A A+HG Q +R +A+ AF+ G +L+ATD
Sbjct: 239 PMEKMLIFVKTKKDAKDLFFLLTKKGIRAQALHGDLTQRQREKALSAFKSGAVSILIATD 298
Query: 492 VASKGLDFANIQHVINYDMPEDIENYVHRI 521
VA++GLD ++ VINY++PED E Y+HRI
Sbjct: 299 VAARGLDIKDVGVVINYNIPEDPELYIHRI 328
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 206 bits (503), Expect = 1e-51
Identities = 117/341 (34%), Positives = 185/341 (54%), Gaps = 11/341 (3%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F + IL+ + A G + TP+Q Q +PA L+G D++ + TGSGKT F LP I
Sbjct: 2 SFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSIQ 61
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
L + P +++ GP L++ P+RELA Q + + ++ R+ +GG
Sbjct: 62 RLLAE----PAVKSIGPRVLVLTPTRELALQVEKAAMTYGKEMR-----RFRTACLVGGA 112
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++ + + V ++VATPGRL+D L++ + + L +DEADRM+DMGF +D++ I
Sbjct: 113 PYGLQLKRLSQPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLDMGFVDDIKAI 172
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
+ +RQTLLFSAT+ + N AR + + + Q L A
Sbjct: 173 AARCPAERQTLLFSATLDGVVGNLARELTRDAQRIEIEAVPHKEAKIEQRLLFADNMDHK 232
Query: 423 VQLLHCLQKTPP--PTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
+LL L + ++FA K+ + + + L G + A+HG Q +R+RA++ R
Sbjct: 233 NRLLDALLRDVEMVQAIVFASTKRSTEEISDLLAESGFASDALHGDMQQGQRNRALQRLR 292
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
G VLVATDVA++G+D A+I HVIN+D+P E+YVHRI
Sbjct: 293 EGRTRVLVATDVAARGIDVASISHVINFDLPRQAEDYVHRI 333
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 206 bits (503), Expect = 1e-51
Identities = 115/332 (34%), Positives = 192/332 (57%), Gaps = 20/332 (6%)
Query: 193 ILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMP 252
+L+ + G + PTPIQ + +P +L G +++G A TG+GKT + LP++ Q ++
Sbjct: 13 LLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVL-----QRIQ-- 65
Query: 253 FIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQ 312
R + LI+ P+RELA Q D + ++LK +R+ GG A+ + ++
Sbjct: 66 --RGKKAQVLIVTPTRELALQVADEVAKLGKYLK------VRALAVYGGQAIERQIRGLR 117
Query: 313 KGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQT 372
+GV ++V TPGR++D + +K + + +DEAD M+DMGF +D+ I + ++QT
Sbjct: 118 QGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQT 177
Query: 373 LLFSATMPKKIQNFARSALVRPVTVN-VGRAGAASLTVRQDLEPAQPEARTVQLLHCL-- 429
LLFSAT+P I+ + L TV VGR +RQ + PE ++ L +
Sbjct: 178 LLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVP-AIRQ-VYYELPETEKIEGLVSILN 235
Query: 430 QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVA 489
+ P ++F K+ VD V E L +G A +HG Q ER++ +++F+ G+ ++LVA
Sbjct: 236 SELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVA 295
Query: 490 TDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
TDVA++GLD ++ HVIN+D+P++ E+Y+HRI
Sbjct: 296 TDVAARGLDIPDVSHVINFDIPQNPESYIHRI 327
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 206 bits (503), Expect = 1e-51
Identities = 120/342 (35%), Positives = 189/342 (55%), Gaps = 18/342 (5%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPI 240
+ +F+ + ILR +E K ++PT IQ +P +L G+D+IG A TGSGKTL F I
Sbjct: 1 MESFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGI 60
Query: 241 IMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIG 300
I Q+++ + G L++ P+RELA+Q + ++ F RH +L +P G
Sbjct: 61 I-----QKIE----KGNGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAP------IYG 105
Query: 301 GVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVR 360
GVA++ + +++ ++VATPGRL+D +++ + L L +DEADRM+DMGF +DV
Sbjct: 106 GVAINPQIRQLERA-DVVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFIDDVE 164
Query: 361 TIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEA 420
I RQT++FSAT+ K IQ + + P V +A S ++Q +
Sbjct: 165 EIIDECPSDRQTMMFSATVSKDIQYLSSKYMNNPSKV-FAKAYVDSDKLKQVYIDVPKKM 223
Query: 421 RTVQLLHCLQKTPPP-TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAF 479
+ L+H L+ ++F + +VD V + L ++A+AIHGG Q +R + F
Sbjct: 224 KFSLLVHLLKSEKSGLVMVFCNTRSNVDFVQKNLRKNDIDAIAIHGGHTQAKRKSTLSKF 283
Query: 480 RRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
LV TDVA++GLD ++ HV N+D+P+D YVHRI
Sbjct: 284 HSSNAHALVCTDVAARGLDIPHVSHVYNFDIPDDPSEYVHRI 325
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 206 bits (502), Expect = 2e-51
Identities = 111/339 (32%), Positives = 185/339 (54%), Gaps = 15/339 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGR-DMIGIAFTGSGKTLVFTLPIIM 242
F+ + + +LR + G + PT +Q + +P +L D++ +A TG+GKT F P+I
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVI- 62
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
Q++ N LI+ P+REL Q + ++++ ++ K I GG
Sbjct: 63 ----QKIDA---NNRNTQALILSPTRELCLQITNELKNYSKYEK-----GINVVAVYGGA 110
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
+++E +++G I+VATPGR+ DM+++++V ++ Y +DEAD M++MGF ED+ I
Sbjct: 111 SITEQARDIKRGAQIIVATPGRMQDMINRRLVDISQINYCILDEADEMLNMGFYEDIVNI 170
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
S ++ T LFSATMP ++ + + P+ + VG + S TV + R
Sbjct: 171 LSTTPDEKNTWLFSATMPAEVARIGKQFMTDPIEITVGAKNSGSATVSHEYYLVNARDRY 230
Query: 423 VQLLHCLQKTPPP-TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L P +++F K+D AV E L+ G A A+HG Q +R ++AFR
Sbjct: 231 EALKRLADANPDIFSVVFCRTKRDTQAVAEKLVEDGYSAAALHGDLSQAQRDGVMKAFRG 290
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHR 520
+ +LVATDVA++G+D N+ HV+NY +P++IE Y HR
Sbjct: 291 RQIQMLVATDVAARGIDVDNVTHVVNYQLPDEIETYNHR 329
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 206 bits (502), Expect = 2e-51
Identities = 136/382 (35%), Positives = 197/382 (51%), Gaps = 18/382 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TF+ + ILR L G PTPIQ Q +P V++GRD++GIA TG+GKT F LP++
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLH 61
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
E + IRN L++ P+RELA Q H + + ++L + L +GGV
Sbjct: 62 KIAEG--RRHGIRNRA---LVLSPTRELATQIHQAAKDYAKYL------HTNAVLLVGGV 110
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
+++ I+VATPGRL+D + + + L + +DEADRM+DMGF D+ TI
Sbjct: 111 DFIRQERNLKRNWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTI 170
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
RQ+LLFSAT P +IQ A + V V V S + Q+ ++
Sbjct: 171 VRQLPKGRQSLLFSATCPPRIQELAATFQNDAVIVRVEPERKGSDHIHQEWITVSHGSQK 230
Query: 423 VQLLH-CLQKTPPPT---LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEA 478
+ LL L + T +IF K+ + + L G + A+HG K Q R+R +
Sbjct: 231 LGLLKKVLDEGKSETGQVIIFTRTKRSAEDLSIALNDAGYPSDALHGDKSQPVRNRVLSR 290
Query: 479 FRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXX 538
FRRG+ VLVATDVA++GLD I HVINYD+P+ E+YVHRI
Sbjct: 291 FRRGDLKVLVATDVAARGLDIDGITHVINYDLPQTAEDYVHRIGRTGRAGRTGRALSFFH 350
Query: 539 XPDHSVLRDLVHLLREAGQRVP 560
D ++R + + AG+ +P
Sbjct: 351 PADRDIVRSIETM---AGKPIP 369
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 205 bits (501), Expect = 2e-51
Identities = 119/340 (35%), Positives = 182/340 (53%), Gaps = 15/340 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TF + IL+ ++ G + PT +Q + +P +LN D+I ++ TGSGKT VF + I+
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
+E GP GLI+ P+RELA Q + I+ ++LK ++ G
Sbjct: 64 LTNPEEA--------GPQGLILTPARELAVQVDNDIRKMAKYLKH------KTTAIYGQH 109
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++ +++ KGV I+ TPGR+ D + + R+L +DEADRM+DMGF + V I
Sbjct: 110 NINLETQILNKGVSIVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLDQVVRI 169
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
+R TLLFSATMP +I N + + PVT+ + T+ Q +
Sbjct: 170 VKTLPKERITLLFSATMPPEIHNICKRYMNNPVTIEIESQTKTVDTIHQVYYRVNYNEKN 229
Query: 423 VQLLHCL-QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
QL L + P +IF K VD V +L KG + A+HG Q +R ++ F++
Sbjct: 230 TQLNRLLIVEKPESCMIFCNTKAAVDRVQSFLGKKGYSSRALHGDIPQSKRLNTIQQFKQ 289
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
G+ +LVATDVA++G+ ++ VINYD+P D +NYVHRI
Sbjct: 290 GKFHILVATDVAARGIHIEDLSLVINYDVPNDKDNYVHRI 329
>UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4;
Caenorhabditis|Rep: ATP-dependent RNA helicase glh-2 -
Caenorhabditis elegans
Length = 974
Score = 205 bits (501), Expect = 2e-51
Identities = 134/402 (33%), Positives = 205/402 (50%), Gaps = 27/402 (6%)
Query: 182 RTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPII 241
+TF + + + + G K TPIQ +P + G D++ A TGSGKT F LPI+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 242 MFCL-EQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIG 300
+ E ++ P +I+ P+REL Q ++ + F + EIR G
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMM----EIRP--VYG 665
Query: 301 GVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMID-MGFEEDV 359
G+AV ++KG I+V T GR+ ++ ++L+ CR+ +DEADRMID MGF D+
Sbjct: 666 GLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDI 725
Query: 360 RTIFSYFA----GQRQTLLFSATMPKKIQNFARSALVRP-VTVNVGRAGAASLTVRQDLE 414
TI +Y + RQTL+FSAT P +Q AR+ L + + + + GAA+ V Q+ E
Sbjct: 726 DTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIGAANKCVLQEFE 785
Query: 415 PAQPEARTVQLLHCL-------------QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAV 461
+ +LL L + T++F ++ D + L V A+
Sbjct: 786 KCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFVSQRAMADTLASILSSAQVPAI 845
Query: 462 AIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
IHG ++Q ERS A+ FR G K VL+AT VA +GLD + HVINYDMP++I++Y+HRI
Sbjct: 846 TIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRI 905
Query: 522 XXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFL 563
D ++L +LV +L +A Q VP ++
Sbjct: 906 -GRTGRVGNAGRATSFISEDCNLLSELVRVLSDADQLVPEWM 946
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 205 bits (500), Expect = 3e-51
Identities = 118/331 (35%), Positives = 186/331 (56%), Gaps = 16/331 (4%)
Query: 193 ILRGLEAKGIQKPTPIQVQGMPAVLN-GRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKM 251
I + LEAKG ++P+PIQ Q +P +L+ D+IG A TG+GKT F LPI+ Q+++
Sbjct: 13 ITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIV-----QKIE- 66
Query: 252 PFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVV 311
P ++ P LI+CP+RELA Q ++ I+ F + +T + GG + + +
Sbjct: 67 PGLKK--PQALILCPTRELAIQVNEEIKSFCKGRGIT------TVTLYGGAPIMDQKRAL 118
Query: 312 QKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQ 371
+KGV ++VATPGR + ++ + L+ YL +DEAD M++MGF EDV + R
Sbjct: 119 KKGVDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDRT 178
Query: 372 TLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQ- 430
L+FSATMP +++ A S + +T+ T+ Q + A PE + L +
Sbjct: 179 VLMFSATMPPRLKKIAESYMHNSITIKAKSETMTMETIDQVVYEAYPENKFAALCRIMDL 238
Query: 431 KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVAT 490
+ +IF K +V+ V L +G A IHG QE R R ++ FR +L+AT
Sbjct: 239 EKDFYGIIFCRTKVEVEKVSAGLANEGYAADYIHGDVAQESRERLLKRFRNRNISLLIAT 298
Query: 491 DVASKGLDFANIQHVINYDMPEDIENYVHRI 521
DVA++G+D ++ H++N+ +PE E+YVHRI
Sbjct: 299 DVAARGIDVTDLSHIVNFSLPEQFESYVHRI 329
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 204 bits (499), Expect = 4e-51
Identities = 120/328 (36%), Positives = 180/328 (54%), Gaps = 18/328 (5%)
Query: 197 LEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRN 256
LE G PT IQ Q +P +L+GRD++G + TG+GKT F+LPI+ Q+
Sbjct: 18 LEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILERLDPQQ-------- 69
Query: 257 EGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVH 316
+ +++ P+RELA Q HD + F+ G+ +R+ GG ++ M +++GVH
Sbjct: 70 KAVQAIVLTPTRELAIQVHDAMAQFV------GNSGLRTLAIYGGQSIDRQMLQLKRGVH 123
Query: 317 IMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFS 376
I+V TPGR++D+L++ ++L+ ++ +DEAD M+ MGF +DV I S RQT LFS
Sbjct: 124 IVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQDRQTALFS 183
Query: 377 ATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQ--DLEPAQ-PEARTVQLLHCLQKTP 433
ATMP I+ L PVTV V + A + Q L P +AR +Q + + P
Sbjct: 184 ATMPPSIRMLVNKFLRSPVTVTVEQPKATPNKINQVAYLIPRHWTKARALQPI-LEMEDP 242
Query: 434 PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVA 493
LIF ++ + L G HG Q+ R R + FR + +VATD+A
Sbjct: 243 ETALIFVRTRRTAAELTSQLQAAGHSVDEYHGDLSQQARERLLTRFRSRQVRWVVATDIA 302
Query: 494 SKGLDFANIQHVINYDMPEDIENYVHRI 521
++GLD + HVINYD+P+ +E YVHRI
Sbjct: 303 ARGLDVDQLSHVINYDLPDSVETYVHRI 330
>UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep:
Vasa-like protein - Macrobrachium rosenbergii (Giant
fresh water prawn)
Length = 710
Score = 204 bits (499), Expect = 4e-51
Identities = 127/365 (34%), Positives = 189/365 (51%), Gaps = 16/365 (4%)
Query: 207 PIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMP-FIRNEGPYGLIIC 265
P+Q G+P G D++ A TGSGKT F LPI+ + V F+ + P +I+
Sbjct: 305 PVQKCGIPR--GGGDLMACAQTGSGKTAAFLLPILQQLMADGVAASSFVELQEPEAIIVA 362
Query: 266 PSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRL 325
P+REL Q F+ K +R + GGV + + KG +I+ TPGRL
Sbjct: 363 PTRELINQI------FLEARKFAYGTCVRPVVVYGGVNTGFQLREISKGCNIVCGTPGRL 416
Query: 326 MDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFA----GQRQTLLFSATMPK 381
+D++ + + L RYL +DEADRM+DMGFE D+R + + RQTLLFSAT P+
Sbjct: 417 LDVIQRGWIGLTKLRYLVLDEADRMLDMGFEPDMRRLVASPGMPPKENRQTLLFSATYPQ 476
Query: 382 KIQNFARSALVRP-VTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPP-TLIF 439
IQ A L + + VG G A V Q ++ QLL L+ T++F
Sbjct: 477 DIQKLAADFLKTDYLFLAVGIVGGACSDVEQTFVQVTKYSKREQLLDFLKTIGNERTMVF 536
Query: 440 AERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDF 499
E K+ D + +L + + +IHG ++Q ER +A+ F+ G+ +LVAT VA++GLD
Sbjct: 537 VETKRQADFIATFLCQEELPTTSIHGDREQREREQALADFKAGKCPILVATSVAARGLDI 596
Query: 500 ANIQHVINYDMPEDIENYVHRIXXXXX-XXXXXXXXXXXXXPDHSVLRDLVHLLREAGQR 558
+QHV+N+D+P++I+ YVHRI D + LV +L +A Q
Sbjct: 597 PEVQHVVNFDLPKNIDEYVHRIGRTGRCGNIGRAVSFYDPEVDSQLAASLVTILSKAQQE 656
Query: 559 VPGFL 563
VP +L
Sbjct: 657 VPSWL 661
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 204 bits (499), Expect = 4e-51
Identities = 142/452 (31%), Positives = 223/452 (49%), Gaps = 41/452 (9%)
Query: 113 EEEHILESVAQSKA-LMGVAELAKGIQYEEPIKTSWRPPRCILELPETRHEMIRNKLRIL 171
++E ++ V ++KA + + + +K I+YE K + + I + + R +L +
Sbjct: 327 DDEEFMKRVKKTKAEKLSLVDHSK-IEYEPFRKNFYIEVKDISRMTQDAVNAYRKELELK 385
Query: 172 VEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSG 231
V G D P PI+ + IL L+ +KP PIQ Q +P +++GRD IG+A TGSG
Sbjct: 386 VHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSG 445
Query: 232 KTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSP 291
KTL F LP++ +Q P +GP GL++ P+REL +Q + I+ F + L + P
Sbjct: 446 KTLGFVLPMLRHIKDQP---PVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVP 502
Query: 292 EIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDML---DKKMVRLNVCRYLCMDEAD 348
GG V++ + +++G I+V TPGR++D+L K+ L YL MDEAD
Sbjct: 503 ------VYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEAD 556
Query: 349 RMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLT 408
RM DMGFE + I RQT+LFSAT P++++ AR L +PV + VG +
Sbjct: 557 RMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKD 616
Query: 409 VRQDLEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKD 468
+ Q +E R +LL L + +E KG V + +
Sbjct: 617 ITQLVEIRPESERFSRLLELLGEW-----------------YE----KGKVLVFV---RS 652
Query: 469 QEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXX 528
QE+ ++ F+ ++L+AT VA++GLD ++ V+N+D P E+YVHR+
Sbjct: 653 QEK---SISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAG 709
Query: 529 XXXXXXXXXXXPDHSVLRDLVHLLREAGQRVP 560
D DLV L + Q VP
Sbjct: 710 RKGCAVTFISEDDAKYAPDLVKALELSEQPVP 741
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 204 bits (498), Expect = 5e-51
Identities = 114/339 (33%), Positives = 178/339 (52%), Gaps = 14/339 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + IL L G PTPIQ +P +L GRD +G A TG+GKT F+LP++
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
+ K P +++ P+RELA Q I++ +++K EI GG +
Sbjct: 88 LNLSQYK--------PQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEI-----YGGAS 134
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+ + M ++ G HI+V TPGR+ D++ + + L+ C +DEAD M+ MGF +DV I
Sbjct: 135 ILDQMRALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIM 194
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
Q +LFSATMP ++ L P V+V + V Q + +
Sbjct: 195 EQAPESAQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDE 254
Query: 424 QLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG 482
+ L+ + +++F +QD + + ++L +G +A A+HG Q R R V+ ++G
Sbjct: 255 AMARLLETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQG 314
Query: 483 EKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
D+LVATDV ++GLD I HV NYD+P D+E+Y+HRI
Sbjct: 315 VIDILVATDVVARGLDVPRITHVYNYDIPFDVESYIHRI 353
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 204 bits (498), Expect = 5e-51
Identities = 119/329 (36%), Positives = 177/329 (53%), Gaps = 9/329 (2%)
Query: 194 LRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPF 253
LR + KG + PT IQ Q +PA+L GRD++G A TGSGKT F LP+ L+Q P
Sbjct: 17 LRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPM----LQQLANAPT 72
Query: 254 IRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQK 313
GLI+ P+RELA Q + I F ++L ++ + GGV+++ M ++
Sbjct: 73 GTPRPTRGLILVPTRELAAQVGEAIAGFAKYLP----QRVKVAVVFGGVSINPQMMNLRG 128
Query: 314 GVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTL 373
G I+VATPGRL+D+L+ ++++ L +DEADR++D+GF E++ I +RQ L
Sbjct: 129 GADIVVATPGRLLDLLEHNALKISEVSTLVLDEADRLLDLGFGEELGRILELLPPRRQNL 188
Query: 374 LFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTP 433
FSAT P I+ A S L P+ + V + Q RT L H +Q
Sbjct: 189 FFSATFPPAIEVLAESMLHDPLRIEVQAVPETKPDIAQRAIQVDASRRTQLLRHLVQTEK 248
Query: 434 -PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDV 492
L+F K + V + L +EA HG Q +R++ ++ FR V+VATDV
Sbjct: 249 WERALVFVATKHAAEIVADKLRKVHIEAEPFHGELSQGKRTQVLQDFRIKAVQVVVATDV 308
Query: 493 ASKGLDFANIQHVINYDMPEDIENYVHRI 521
A++G+D A + V+NYD+P +Y HRI
Sbjct: 309 AARGIDIAQMPVVVNYDLPRSAVDYTHRI 337
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 204 bits (497), Expect = 7e-51
Identities = 115/339 (33%), Positives = 186/339 (54%), Gaps = 16/339 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F ++ + I + + G ++P+PIQ + +PA+L G D+IG A TG+GKT F +P++
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVV-- 65
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
++V LI+ P+RELA Q IQ +H K IR+ GG +
Sbjct: 66 ---EKVST----GRHVQALILTPTRELAIQVSGEIQKLSKHKK------IRTLPIYGGQS 112
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+ ++ +++GV +++ TPGR++D L +K + L+ + +DEAD M+DMGF +D+ +I
Sbjct: 113 IVHQIKALKQGVQVVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFIDDIESIL 172
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
+RQTLLFSATMP I+ +R + P TV++ R + ++ Q +
Sbjct: 173 RQVKNERQTLLFSATMPPAIKKLSRKYMNDPQTVSINRREVTAPSIDQFYYKVLERNKLD 232
Query: 424 QLLHCLQKTPPPT-LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG 482
L + ++F K+ V + E L +G A +HG Q +R + FR
Sbjct: 233 SLCRIIDSEQIDLGILFCRTKKGVAELTEALQARGYIADGLHGDLTQSQRDAVMRKFRDS 292
Query: 483 EKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ L+ATDVA++G+D N+ HVINYD+P+D E+YVHRI
Sbjct: 293 SIEFLIATDVAARGIDVGNVSHVINYDIPQDPESYVHRI 331
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 204 bits (497), Expect = 7e-51
Identities = 120/373 (32%), Positives = 195/373 (52%), Gaps = 15/373 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F+ + IL L++ G + P+PIQ Q + +LN +D+IG A TG+GKT F LP++
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLL-- 71
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
++ + P LI+ P+RELA Q + +Q + R +K GG +
Sbjct: 72 ---DKINLNI---NAPQLLILAPTRELAIQVSEAVQTYARGMK-----GFHVLPIYGGQS 120
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+ +++GVH +V TPGR+MD ++KK ++L+ + +DEAD M+ MGF +D++ I
Sbjct: 121 YDIQLRPLKRGVHAIVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLKMGFIDDIKWIM 180
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
QRQ LFSATMP I+ A+ L +P + + + T+ Q + +
Sbjct: 181 QRIPEQRQIALFSATMPNVIKKIAKQFLNQPKIIKIKTKTETATTITQKYCMVGGLSNKL 240
Query: 424 Q-LLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
+ L L+ T +IF K + E L +G A AI+G Q +R R + +++
Sbjct: 241 EALTRILEVTVFDAMIIFVRTKTLTTELTEKLSARGFSADAINGDIQQNQRERIINDYKQ 300
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPD 541
G+ D+L+ATD+A++GLD I HV+NYD+P+D E+YVHRI +
Sbjct: 301 GKIDILIATDIAARGLDVERISHVVNYDIPQDAESYVHRIGRTGRAGRKGEAILFVSNRE 360
Query: 542 HSVLRDLVHLLRE 554
+L + H+ R+
Sbjct: 361 RRMLNTIEHVTRQ 373
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 203 bits (496), Expect = 1e-50
Identities = 117/341 (34%), Positives = 181/341 (53%), Gaps = 13/341 (3%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPI 240
+ TF M + + LEA PTP+Q + +P L+GRD++ A TG+GKTL F +P
Sbjct: 26 LTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPA 85
Query: 241 IMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIG 300
+ + E P G LI+ P+RELA Q H + + +L G + L +G
Sbjct: 86 LEMLRDTE---PC----GVQVLILVPTRELAMQVHGVYE------QLKGKKLKSAALVMG 132
Query: 301 GVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVR 360
G + ++ ++ G ++VATPGRL D + +++V L+ L +DEADRM+DMGF ++
Sbjct: 133 GTSERNQIQSIRSGARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEADRMMDMGFLPAIK 192
Query: 361 TIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEA 420
I +QTL FSATM + + L V V +G + V
Sbjct: 193 RILRALPRDKQTLCFSATMGPAVSGIVQDCLYNAVRVEIGSILKPAAAVELHAIEVPIMG 252
Query: 421 RTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
+ L L + TL+FA K+ + + + L+ G A IHG + Q +R+ A+ AF
Sbjct: 253 KKDALRQLLYEQEGKTLVFARTKRGTERLAKELIRDGFSAAMIHGDRSQSQRNAALAAFD 312
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+G VLVATDVA++GLD +I HVIN+D+P+ E+++HR+
Sbjct: 313 KGSIKVLVATDVAARGLDVDDIAHVINFDLPQVPEDFIHRV 353
>UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 588
Score = 203 bits (496), Expect = 1e-50
Identities = 124/415 (29%), Positives = 215/415 (51%), Gaps = 15/415 (3%)
Query: 155 ELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKF-PKGILRGL-EAKGIQKPTPIQVQG 212
E+ E +++ I+ +G P+R ++ + P+ +LR + + PTPIQ
Sbjct: 145 EMNERDWRILKEDYAIVTKGGTVENPLRNWEELNIIPRDLLRVIIQELRFPSPTPIQRIT 204
Query: 213 MPAVLNG---RDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRN-EGPYGLIICPSR 268
+P V N RD +G+A TGSGKTL F +PI++ + P ++ +GP LI+ P+R
Sbjct: 205 IPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTR 264
Query: 269 ELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDM 328
EL +Q Q + + + + +GG ++ E + +G I+VATPGRL+D
Sbjct: 265 ELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDS 324
Query: 329 LDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYF------AGQRQTLLFSATMPKK 382
L+ ++ + L +DEAD+MID+GFE+ V I + A RQTL+F+ATM
Sbjct: 325 LENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNRQTLMFTATMTPV 384
Query: 383 IQNFARSALVRPVTVNVGRAGAASLTVRQDLEPA-QPEARTVQLLHCLQKTPPPTLIFAE 441
I+ A + +PV +G + ++Q +E A E + +L + K PP +IF
Sbjct: 385 IEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDKFKKLKPIVAKYDPPIIIFIN 444
Query: 442 RKQDVDAVHE-YLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFA 500
KQ D + E + ++ +HG K QE+R +++ FR + +++AT+VA++GLD
Sbjct: 445 YKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDIP 504
Query: 501 NIQHVINYDMPEDIENYVHRI-XXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLRE 554
N+ V+N+ + + +++Y+HRI D S++R+L +R+
Sbjct: 505 NVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVSAAEDESLIRELYKYVRK 559
>UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 619
Score = 203 bits (495), Expect = 1e-50
Identities = 139/429 (32%), Positives = 210/429 (48%), Gaps = 30/429 (6%)
Query: 167 KLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIA 226
++ ++ EG P F+ +L+ ++ G + PTPIQ +PA+ G D+IGIA
Sbjct: 107 EIAVVQEGPVRVEPALRFEDAGLHPAMLKNVDLCGYKVPTPIQAYCIPAIHKGHDVIGIA 166
Query: 227 FTGSGKTLVFTLPIIMFCLEQEVKM------PFIRNEGPYG--------LIICPSRELAK 272
TGSGKT F +P+I + + K+ P N +G +I+CP+RELA
Sbjct: 167 QTGSGKTAAFLIPVINKLMGKAKKLAAPRPNPVEYNMDIHGPVRAEPLVVIVCPTRELA- 225
Query: 273 QTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDK- 331
IQ F KL +R + GG + + + G I+ ATPGRL+ +DK
Sbjct: 226 -----IQAFNEARKLCYRSMLRPGVVYGGGNFMDQIRQIGLGCDILCATPGRLLHFMDKP 280
Query: 332 KMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSY--FAGQRQTLLFSATMPKKIQNFARS 389
+++ L RY+ +DEAD M+ +EED++ I S A + + LLFSAT PKKI++ AR
Sbjct: 281 ELLNLQRVRYVVIDEADEMLTADWEEDMKKIMSAGGAAQEIKYLLFSATFPKKIRDLARE 340
Query: 390 ALVRP-VTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPP-TLIFAERKQDVD 447
L V + VGRAG+ + Q + P + L + PP T+IF K D
Sbjct: 341 HLSEDHVQLRVGRAGSTHSNIIQTVIETAPMNKKRALNDLINSMPPQRTIIFVNNKWTAD 400
Query: 448 AVHEYLLLK-GVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVI 506
+ +YL + + ++H + Q ER A+ AFR G +LV T V ++G+D N+ HV+
Sbjct: 401 ELDDYLYNECKLPCTSMHADRTQREREDALRAFRAGTAPILVTTGVTARGIDVRNVAHVV 460
Query: 507 NYDMPE----DIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGF 562
NYD+P IE Y HRI D ++ LV + E Q +P F
Sbjct: 461 NYDLPSMDHGGIEEYTHRIGRTGRIGNKGLATSFYTDRDEAIASVLVRTMLETNQEIPEF 520
Query: 563 LLDMLGEPD 571
L + + D
Sbjct: 521 LSGYIPDGD 529
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 202 bits (494), Expect = 2e-50
Identities = 124/344 (36%), Positives = 183/344 (53%), Gaps = 11/344 (3%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F + + I + LE GI P PIQ +P + G D+IG A TG+GKTL F + I++
Sbjct: 54 SFADLGVREDICQALEGVGIVSPFPIQAMSIPIAVEGTDLIGQARTGTGKTLAFGITILL 113
Query: 243 -FCLEQEVKMPFIRNEG-PYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIG 300
L + + +G P L++CP+RELA Q I + G+ R G
Sbjct: 114 RITLPGDEGWEELTTKGKPQALVMCPTRELALQVSKDIS---TAASVRGA---RVLTVYG 167
Query: 301 GVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVR 360
GV ++ ++ GV ++V TPGRL+D+ +K + L+ R + +DEAD M+D+GF DV
Sbjct: 168 GVGYESQIDALKAGVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEMLDLGFLPDVE 227
Query: 361 TIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLT--VRQDLEPAQP 418
+ RQT+LFSATMP I ARS L RPV V A + +Q + A P
Sbjct: 228 NLIGRTPASRQTMLFSATMPAPIMALARSQLHRPVHVRAEGADTQATVPDTQQFVYQAHP 287
Query: 419 EARTVQLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVE 477
+ + LQ +IF K+ + + L +G + AIHG Q R +A++
Sbjct: 288 LDKIEIIGRILQANDVEKVIIFCRTKRACQRLSDDLDDRGFKTRAIHGDLTQVAREKALK 347
Query: 478 AFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
FR G+ +LVATDVA++G+D + HVIN++ PED + YVHRI
Sbjct: 348 KFRHGDATILVATDVAARGIDVTGVSHVINHECPEDEKTYVHRI 391
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 202 bits (494), Expect = 2e-50
Identities = 117/326 (35%), Positives = 179/326 (54%), Gaps = 13/326 (3%)
Query: 197 LEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRN 256
LEA +P+PIQ +P L GRD++G A TG+GKT F +PII E+ P RN
Sbjct: 19 LEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPII----ERLEHGPNSRN 74
Query: 257 EGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVH 316
P LI+ P+RELA Q D I KLT I GG + ME +++ H
Sbjct: 75 --PQALILTPTRELAVQVRDEIA------KLTHGQRINVVAVYGGKPLRSQMEKLKRAPH 126
Query: 317 IMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFS 376
I+V TPGR++D++ ++ ++L + R + +DEADRM+D+GF D+ I +RQTLL S
Sbjct: 127 IVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEERQTLLLS 186
Query: 377 ATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQK-TPPP 435
AT+P I+ A+ + P V+ ++ T+ Q + L+ L++ P
Sbjct: 187 ATVPPTIEKLAQRYMRNPEKVDFSPTNISAETIEQRYFTVDHSKKFDMLVELLKREQPQK 246
Query: 436 TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASK 495
++F K+ + + + L K IHG Q R+RA+ F+ + VLVATDV +
Sbjct: 247 AIVFCRTKRGTERITQRLSKKTKLVHCIHGDMQQGARNRALSDFKASKFRVLVATDVVGR 306
Query: 496 GLDFANIQHVINYDMPEDIENYVHRI 521
G+D +++ H+INYD+PE ++YVHR+
Sbjct: 307 GIDISDVSHIINYDIPEFSDDYVHRV 332
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 202 bits (493), Expect = 2e-50
Identities = 115/329 (34%), Positives = 182/329 (55%), Gaps = 16/329 (4%)
Query: 193 ILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMP 252
++ LE I +PT IQ Q +P + G D++ + TGSGKTL + LP+I
Sbjct: 14 LIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLID---------S 64
Query: 253 FIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQ 312
FI+N+ LI+ P+RELA Q H + K+T S +I S + IGG + + ++
Sbjct: 65 FIKNKTT-ALILVPTRELATQIHSTLN------KVTTSYKINSAVLIGGEPMPKQFIQLK 117
Query: 313 KGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQT 372
K +++ TPGR++D L++ ++++ +DE DRM+DMG +E + I + +RQ
Sbjct: 118 KNPKVIIGTPGRIIDHLNRGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQV 177
Query: 373 LLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKT 432
L+FSATMPK I ++ L PV + VG A+ ++Q+ + + L L
Sbjct: 178 LMFSATMPKHIIAVSQKYLNNPVRITVGATNKAAAEIKQESMHVSDKEKFSALTKQLGNR 237
Query: 433 PPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDV 492
+IF + K+ D + + L + A AIHG Q +R R + +FR+ ++VATDV
Sbjct: 238 EGSVIIFVKTKRSADQLAKMLKYENHTAEAIHGDLSQRQRERVILSFRKSNHRIMVATDV 297
Query: 493 ASKGLDFANIQHVINYDMPEDIENYVHRI 521
A++GLD + QHVINYD+P E+Y+HRI
Sbjct: 298 AARGLDIPHTQHVINYDLPMCPEDYLHRI 326
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 202 bits (493), Expect = 2e-50
Identities = 117/340 (34%), Positives = 182/340 (53%), Gaps = 14/340 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + + +L+ ++ G ++P+ IQ + +P L G D+IG A TG+GKT F II
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
K + P LI+ P+RELA Q ++ + +H KL+ P GG
Sbjct: 66 ADFSGKK------KSPKALILAPTRELAIQVNEELVRLGKHEKLSVLP------IYGGQP 113
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+ + ++ GV I+V TPGR++D++ +K + LN +L +DEAD M++MGF +D+ I
Sbjct: 114 IDRQIRALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIV 173
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVT-VNVGRAGAASLTVRQDLEPAQPEART 422
RQTLLFSATMP +I+ AR+ + + + ++ + Q + R
Sbjct: 174 KSLKTDRQTLLFSATMPPQIKKLARNYMKEDTKHIAIKKSSLTVSKIEQFYFEIKHRDRF 233
Query: 423 VQLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L L P +IF + K+ VD V E + +G +HG Q R + + F+
Sbjct: 234 ETLCRVLDFDEPNAAIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKE 293
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
G D LVATDVA++G+D ++ HVINYD+P+D E+YVHRI
Sbjct: 294 GSLDFLVATDVAARGIDVESVTHVINYDLPQDNESYVHRI 333
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 202 bits (493), Expect = 2e-50
Identities = 120/340 (35%), Positives = 181/340 (53%), Gaps = 10/340 (2%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F F +++ LE G +K TPIQ + +P G D+ A TG+GKT F+LP+I
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQ 61
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
LE + LI P+RELA+Q D I+ + ++ L+ + GG
Sbjct: 62 QLLESGKSAS---RKTARALIFAPTRELAEQIADNIKAYTKYTNLSVAA------IFGGR 112
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
+S +++ GV I+VATPGRL + ++ V + +L DEADR++DMGF VR I
Sbjct: 113 KMSSQERMLENGVDILVATPGRLEEHIESGNVSVANIEFLVFDEADRILDMGFINAVRKI 172
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
Q ++FSAT ++ ++ L +P + V R + TV L P E +T
Sbjct: 173 MLDVETNPQIMMFSATTSSQLNELSKDILRKPKRIAVERENTTAHTVAHVLYPVDQERKT 232
Query: 423 VQLLHCL-QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L + +K L+F K+ + + + L L G++A HG K Q R RA+E F+
Sbjct: 233 ELLSELIGRKNWQQVLVFVNYKETANDIVKELKLDGIKANVCHGDKAQSARRRALEEFKE 292
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
G+ V+VATDVA++GLD ++ HV+NYDMP E+YVHRI
Sbjct: 293 GKVRVMVATDVAARGLDIEDLPHVVNYDMPFLAEDYVHRI 332
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 202 bits (493), Expect = 2e-50
Identities = 120/339 (35%), Positives = 186/339 (54%), Gaps = 16/339 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + +L ++ G + TPIQ + +P +L G+D+IG A TGSGKT F+LPI+
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILN- 107
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
+ + P ++ LI+CP+RELA Q I+ R L P ++ GG +
Sbjct: 108 --KINLDQPLLQ-----ALILCPTRELASQVVTEIRKLGRRL-----PGLKVLAMTGGQS 155
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
E + ++ GV I+V TPGRL D + + + L+ + + +DEAD+M+DMGF ++++T+
Sbjct: 156 GREQADALENGVQIVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLDMGFADEIKTVM 215
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
G RQT+LFSAT P+ I++ +R V + + Q + ++ +T
Sbjct: 216 RDLPGSRQTVLFSATFPESIEHLSRKYQRHAQQVII--EDEEQNLIEQLVYDSEDNDKTN 273
Query: 424 QLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG 482
L+ LQ+ P T+IF K V + E L G + +HG +Q ER R + FR G
Sbjct: 274 VLMRILQQHPSDSTIIFCNTKNAVAEIAERLNDLGAASGCLHGDMEQRERDRVMAMFRNG 333
Query: 483 EKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+LVATDVA++GLD N++ VIN+D+P E YVHRI
Sbjct: 334 SHRILVATDVAARGLDIDNLELVINFDLPLSPEIYVHRI 372
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 202 bits (493), Expect = 2e-50
Identities = 121/345 (35%), Positives = 185/345 (53%), Gaps = 17/345 (4%)
Query: 180 PIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLP 239
PI +F + +L L G + P+PIQ +P +L G D++G A TG+GKT F LP
Sbjct: 42 PIESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALP 101
Query: 240 IIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAI 299
++ L+ VK P + L++ P+RELA Q + Q + ++L P
Sbjct: 102 LLDR-LDLAVKNPQV-------LVLAPTRELAIQVAEAFQRYAKNL-----PGFHVLPVY 148
Query: 300 GGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDV 359
GG ++ + + +G H++V TPGR+MD +++K + L+ L +DEAD M+ MGF +DV
Sbjct: 149 GGQSMVVQLRQLARGAHVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLRMGFIDDV 208
Query: 360 RTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQ---DLEPA 416
I + +RQT LFSATMP I+ A L P V + + T RQ + A
Sbjct: 209 EWILQHTPAERQTALFSATMPDAIRRVAHRYLREPREVKIKASTTTVSTTRQRYCQISVA 268
Query: 417 QPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAV 476
++L +++ +IF K + + L +G A A++G Q+ R R +
Sbjct: 269 HKLDALTRILE-VEEDFDAAIIFVRTKTATVELADKLEARGYSAAALNGDMTQQLRERVI 327
Query: 477 EAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
E + G+ D++VATDVA++GLD + I HVINYD+P D E YVHRI
Sbjct: 328 EQLKGGQLDIVVATDVAARGLDVSRISHVINYDIPYDTEAYVHRI 372
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 202 bits (493), Expect = 2e-50
Identities = 120/330 (36%), Positives = 176/330 (53%), Gaps = 14/330 (4%)
Query: 193 ILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMP 252
+L + A G ++P+PIQ Q +P +L G DMIG A TG+GKT F LP++ ++
Sbjct: 34 VLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLS-------RID 86
Query: 253 FIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQ 312
R E P LI+ P+RELA Q + + L P + GG + ++ ++
Sbjct: 87 PARRE-PQLLILAPTRELALQVATAFETYASQL-----PGVGVVAVYGGAPMGPQLKALR 140
Query: 313 KGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQT 372
+G I+VATPGRL D L + L+ ++L +DEAD M+ +GF ED+ IF+ RQT
Sbjct: 141 QGAQILVATPGRLCDHLRRDEQLLSTVKHLVLDEADEMLKLGFMEDLEVIFAALPESRQT 200
Query: 373 LLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKT 432
+LFSAT+P I+ A L P V + + Q + +T +L L+
Sbjct: 201 VLFSATLPHSIREIAEKHLHEPQHVKIAAKTQTVARIDQAHLMVHADQKTAAVLRLLEVE 260
Query: 433 PPPTLI-FAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATD 491
LI F KQ + L KG +A A++G Q +R R +E+ + G D++VATD
Sbjct: 261 EFDALIAFVRTKQATLDLAGALEAKGYKAAALNGDIAQNQRERVIESLKDGRLDIVVATD 320
Query: 492 VASKGLDFANIQHVINYDMPEDIENYVHRI 521
VA++G+D I HV N DMP D E+YVHRI
Sbjct: 321 VAARGIDVPRITHVFNVDMPYDPESYVHRI 350
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 202 bits (493), Expect = 2e-50
Identities = 114/338 (33%), Positives = 182/338 (53%), Gaps = 12/338 (3%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + + L +PTPIQ + L G+D++ A TG+GKTL F LP I
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
L E + P +R LI+ P+RELA Q ++ + R TG IR+ +A+GG+
Sbjct: 64 -LSTEPRQPGVR-----ALILTPTRELALQINEALLQIARG---TG---IRAAVAVGGLN 111
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+ ++ G +I+VATPGRL D + + ++ L R L +DE+DRM+DMGF ++ I
Sbjct: 112 ERSQLRDIRGGANIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRII 171
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
+ +RQTLLFSAT+ ++ + + V + +G S V L + +
Sbjct: 172 AAMPAERQTLLFSATLESSVKQLVETHVRNAVRIELGSISKPSEQVDLHLYEVDQDRKFG 231
Query: 424 QLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGE 483
L L++ L+FA K D + + L G ++ AIHG + Q +R +A++ F+ G
Sbjct: 232 LLEMMLREEQGSFLVFARTKHGADKLAKKLAQSGFKSAAIHGDRSQNQRIQALKGFQEGY 291
Query: 484 KDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
VLVATDVA++G+ I HV+N+D+P+ E+++HR+
Sbjct: 292 YRVLVATDVAARGIHVEGISHVVNFDLPQVPEDFIHRV 329
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 202 bits (493), Expect = 2e-50
Identities = 121/345 (35%), Positives = 186/345 (53%), Gaps = 22/345 (6%)
Query: 182 RTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPII 241
+TF + +L+ + G ++PTPIQ +P +L+G+D+ G A TG+GKT F +PII
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPII 64
Query: 242 MFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGG 301
L+ + N+ L++ P+RELA QT + +++ K I GG
Sbjct: 65 ER-LDPD-------NKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPI-----YGG 111
Query: 302 VAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRT 361
+ + ++ V +++ TPGR++D + + + L+ +DEAD+M+DMGF ED+
Sbjct: 112 QPIERQLRALKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIED 171
Query: 362 IFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEAR 421
IF RQT+LFSATMP+ I + R P V + R LTV Q +E E R
Sbjct: 172 IFRDTPKDRQTILFSATMPQPILDITRRFQRDPQFVKITRK---ELTVPQ-IEQTYIEVR 227
Query: 422 TVQLLHCLQKT-----PPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAV 476
L L +T P L+F K+ VD + + +G A+HG Q++R R +
Sbjct: 228 ERDKLEALCRTLDMNNPELALVFCNTKRTVDDLMSRMQARGYFVEALHGDMKQQQRDRVM 287
Query: 477 EAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
FR G DVL+ATDVA++G+D ++ V NYD+P+D+E YVHRI
Sbjct: 288 ARFRSGSIDVLIATDVAARGIDVDDVDIVFNYDVPQDVEYYVHRI 332
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 202 bits (492), Expect = 3e-50
Identities = 122/338 (36%), Positives = 174/338 (51%), Gaps = 16/338 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F+ IL L +G+ PTPIQ +P L G+D+IG A TG+GKTL F LPI
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIA-- 60
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
+ + R P L++ P+RELA Q + HLK+ GG
Sbjct: 61 ---ERLAPSQERGRKPRALVLTPTRELALQVASELTAVAPHLKVVA--------VYGGTG 109
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+ E + +G +VATPGR +D L + ++ L+ +DEAD M+ MGFEE+V +
Sbjct: 110 YGKQKEALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALL 169
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
S RQTLLFSAT+P + A + PV +NV + +T ++ PA R
Sbjct: 170 SATPPSRQTLLFSATLPSWAKRLAERYMKNPVLINVIK--DEPVTYEEEAVPAPVRGRLE 227
Query: 424 QLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG 482
L L +P ++F K + + + + LL G A A+HG Q ER R + AFR+G
Sbjct: 228 VLSDLLYVASPDRAMVFTRTKAETEEIAQGLLRLGHLAQALHGDLSQGERERVLGAFRQG 287
Query: 483 EKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHR 520
E VLVATDVA++GLD + V++Y +P+ E Y HR
Sbjct: 288 EVRVLVATDVAARGLDIPQVDLVVHYRLPDRAEAYQHR 325
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 202 bits (492), Expect = 3e-50
Identities = 123/332 (37%), Positives = 183/332 (55%), Gaps = 15/332 (4%)
Query: 190 PKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEV 249
P+ +L LE G T IQ + + +L G+D++ + TGSGKTL F +P +M +V
Sbjct: 11 PEALLGTLETLGFTTMTEIQQKSIGPILKGKDILAQSKTGSGKTLAFGIPAVM---GTDV 67
Query: 250 KMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECME 309
K + P ++I P+RELA+Q ++ + ++ GGV + +
Sbjct: 68 K-----SNKPQTIVITPTRELAEQVAMELRKIAAY-----KANLKILTLYGGVPLRAQAD 117
Query: 310 VVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQ 369
+ KG HI++ TPGR+ D L K + L + L +DEADRM+DMGF E++ I S Q
Sbjct: 118 SLAKGAHILIGTPGRIQDHLAKGTLTLESIKTLVLDEADRMLDMGFYEEIIKIGSNMPKQ 177
Query: 370 RQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCL 429
+QTLLFSAT P KI++ A++ L P+T+ V A + + + + + +T+ L
Sbjct: 178 KQTLLFSATFPPKIESLAKALLKDPLTIKVDTVQEA-MKINELVYETPDKFKTLNALIGS 236
Query: 430 QKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVA 489
K P LIF K +V ++ + L +G + IHG DQ ER+ AV F K ++VA
Sbjct: 237 YK-PDSLLIFCNTKAEVISLADRLQQRGHSVIDIHGDLDQRERNEAVILFSNRSKRIMVA 295
Query: 490 TDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
TDVAS+GLD +I VINYD+P D E Y HRI
Sbjct: 296 TDVASRGLDIKDISLVINYDLPFDKEVYTHRI 327
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 201 bits (491), Expect = 4e-50
Identities = 115/341 (33%), Positives = 182/341 (53%), Gaps = 17/341 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVL-NGRDMIGIAFTGSGKTLVFTLPII 241
TF + +L+ + G + P+ IQ + +P +L RDM+ +A TG+GKT F P++
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLL 61
Query: 242 MFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGG 301
Q + ++ GLII P+REL Q + ++ + +H+K +R GG
Sbjct: 62 -----QNIDAS---SKTTQGLIIAPTRELCLQITNEMKLYAKHIK-----GVRVVAVYGG 108
Query: 302 VAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRT 361
+ E + +G I+VATPGR+ DM+ ++MV + Y +DEAD M++MGF ED+
Sbjct: 109 SNIQEQAREISRGAQIVVATPGRMQDMMRRRMVDITKLSYCVLDEADEMLNMGFYEDITN 168
Query: 362 IFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEAR 421
I + + T LFSATMP+++ A+ + P+ + VG + V + R
Sbjct: 169 ILADTPEDKLTWLFSATMPREVARIAKEFMHDPLEITVGHKNEGAKNVSHEYYVVHTRDR 228
Query: 422 TVQLLHCLQKTPPP--TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAF 479
Q L L P ++IF K+D V E L+ G A A+HG Q +R +++F
Sbjct: 229 -YQALKRLSDANPDIFSVIFCRTKRDTQKVAEQLIEDGYNAGALHGDLSQNQRDLVMKSF 287
Query: 480 RRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHR 520
R + +LVATDVA++G+D +I HVINY +P++IE Y HR
Sbjct: 288 RNNQIQMLVATDVAARGIDVDDITHVINYQLPDEIETYTHR 328
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 201 bits (491), Expect = 4e-50
Identities = 121/340 (35%), Positives = 180/340 (52%), Gaps = 14/340 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TF + IL L G +KP+PIQ + +P +LNGRD++G+A TGSGKT F+LP++
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
L+ E+K P I L++ P+RELA Q + + F +H++ + GG
Sbjct: 67 N-LDPELKAPQI-------LVLAPTRELAVQVAEAMTDFSKHMR-----GVNVVALYGGQ 113
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
+ +++G I+V TPGRL+D L + + L+ L +DEAD M+ MGF EDV TI
Sbjct: 114 RYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETI 173
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
+ QT LFSATMP+ I+ R + P V + + + Q +
Sbjct: 174 MAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKN 233
Query: 423 VQLLHCLQKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
L+ L+ +IF K V E L G + A++G +Q R + +E +
Sbjct: 234 EALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKD 293
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
G D+L+ATDVA++GLD I V+NYD+P D E+YVHRI
Sbjct: 294 GRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRI 333
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 201 bits (490), Expect = 5e-50
Identities = 113/339 (33%), Positives = 182/339 (53%), Gaps = 14/339 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + I + G ++ +PIQ + +P +L G+D+IG A TG+GKT F +P I
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
EV+ ++ LI+CP+REL Q + + F + +K G+ E+ GG
Sbjct: 71 L---EVESKHLQ-----ALILCPTRELVIQ---VSEQFRKLIKYKGNFEVVPIY--GGQE 117
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+ + ++K I++ATPGR+MD + + + L+ + + +DEAD M+DMGF ED+ I
Sbjct: 118 IERQLRALRKNPQIVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLDMGFREDMEFIL 177
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
RQT++FSATM + + P ++V ++ + Q Q A+
Sbjct: 178 KDTPADRQTIMFSATMTDDVLTLMKKFQNHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 237
Query: 424 QLLHCLQ-KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG 482
L ++ + L+F K VD V E L +G A A+HG +Q++R + + FR+G
Sbjct: 238 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMSGFRKG 297
Query: 483 EKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
++LVATDVA +G+D N++ V NYD+P D E+YVHRI
Sbjct: 298 SIEILVATDVAGRGIDVNNVEAVFNYDLPRDGEDYVHRI 336
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 201 bits (490), Expect = 5e-50
Identities = 107/342 (31%), Positives = 190/342 (55%), Gaps = 15/342 (4%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLN-GRDMIGIAFTGSGKTLVFTLP 239
++TF+ + I + +E G + P P+Q + +P +L D++ +A TG+GKT F LP
Sbjct: 1 MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLP 60
Query: 240 IIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAI 299
++ Q++ ++N P LI+CP+REL Q + + +++ ++
Sbjct: 61 LL-----QQID---VKNRVPQSLILCPTRELCLQIAGDLNDYSKYID-----GLKVLPVY 107
Query: 300 GGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDV 359
GG ++ + +++GVHI+VATPGRL+D++++K V L+ + MDEAD M++MGF + +
Sbjct: 108 GGSSIDSQIRSLKRGVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLNMGFTDSI 167
Query: 360 RTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPE 419
I + +R TLLFSATM +I +++ L + +GR ++ V+ Q +
Sbjct: 168 NAILADVPKERNTLLFSATMSPEIARISKNYLQNAKEITIGRKNESTSNVKHVAYTVQAK 227
Query: 420 ARTVQLLHCLQKTPP-PTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEA 478
+ L + P +IF +++ + + L+ +G A ++HG Q +R ++
Sbjct: 228 DKYAALKRIVDYYPQIYGIIFCRTRKETQEIADKLMQEGYNADSLHGELSQAQRDAVMQK 287
Query: 479 FRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHR 520
FR +LVATDVA++GLD ++ HVINY +P+D E+Y HR
Sbjct: 288 FRIRNLQLLVATDVAARGLDVDDLTHVINYGLPDDTESYTHR 329
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 201 bits (490), Expect = 5e-50
Identities = 117/349 (33%), Positives = 182/349 (52%), Gaps = 18/349 (5%)
Query: 179 PPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTL 238
PP+ F ++ +++ ++ G PTPIQ + +P VL +D++GIA TG+GKT F L
Sbjct: 3 PPLNNFDNLGLSAKVIKAVQLAGYTAPTPIQSETIPHVLQHKDVLGIAQTGTGKTASFVL 62
Query: 239 PIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHF-IRHLKLTGSPEIRSCL 297
P++ + K P LI+ P+RELA Q + + I H + L
Sbjct: 63 PMLTLLEKGRAKARM-----PRTLILEPTRELAAQVKENFDKYGINH-------RLNVAL 110
Query: 298 AIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEE 357
IGGV+ +++G +++ATPGRL+D ++ + L L +DEADRM+DMGF
Sbjct: 111 LIGGVSFDHQDRKLERGADVLIATPGRLLDHFERGTLLLMGVEILVIDEADRMLDMGFIP 170
Query: 358 DVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQ 417
D+ I RQTL FSATM +I L PV V + + + + T+ Q L +
Sbjct: 171 DIERICKLTPFTRQTLFFSATMAPEIIKLTEQFLHSPVCVEITKESSTARTITQRLVKSG 230
Query: 418 PEA---RTV--QLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEER 472
+A R V +L+H K ++F RK+D+ + L+ +HG DQ R
Sbjct: 231 SKAWHKRAVLRKLIHDENKELKNAIVFCNRKKDISELFRSLVKYNFSVGVLHGDMDQHSR 290
Query: 473 SRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ F+ + +LVA+DVA++GLD ++ HV NYD+P E+Y+HRI
Sbjct: 291 MNTLADFKENKLTLLVASDVAARGLDIPDVSHVFNYDVPTHAEDYIHRI 339
>UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Candida glabrata|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 582
Score = 201 bits (490), Expect = 5e-50
Identities = 124/391 (31%), Positives = 212/391 (54%), Gaps = 19/391 (4%)
Query: 146 SWRPPRCILELPETRHEMIRNKLRILVEGDDPPP-PIRTFQHMK-FPKGILRGL-EAKGI 202
SWR + ++E+ E ++R + I +G P+R + P ++R L E G
Sbjct: 133 SWRE-KLLVEMDERDWRIMREEFNITSKGKGAVKHPLRNWSETNVIPTDLVRALTEGMGF 191
Query: 203 QKPTPIQVQGMPAVLNG-----RDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRN- 256
+PT IQ +P ++ RD++GIA TGSGKTL F++PI+ + ++
Sbjct: 192 DEPTAIQRITIPNAISSNKSVPRDILGIASTGSGKTLAFSIPILARLDALPARPVNLKTL 251
Query: 257 EGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVH 316
+GP L++ P+RELA+Q I + + + + +GG ++S+ ++ G
Sbjct: 252 DGPLALVLVPTRELAQQISQEINRLLSAWE--NKKNLNAVSIVGGHSMSDISHTLRNGCD 309
Query: 317 IMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQ----RQT 372
I++ATPGRL+D+LD +V LN + L +DEADRMID+GFE+ +++I S+ RQT
Sbjct: 310 ILIATPGRLLDVLDNHLVVLNKIQSLVLDEADRMIDLGFEDQMKSILSHLMADELAARQT 369
Query: 373 LLFSATMPKKIQNFARSALVRPVTVNVG-RAGAASLTVRQDLEPAQPEARTVQLL-HCLQ 430
+LF+AT+ +++ A+ L P+ V+VG R + + Q + + + + L L
Sbjct: 370 MLFTATLSSSVESIAKGYLKNPLHVSVGSRWDSDKPLITQVVRHTGDDDKKLSFLKDDLI 429
Query: 431 KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVAT 490
K P +IF K+ D + L V +HG K Q +R A++ + G +VL+AT
Sbjct: 430 KNGLPAIIFINYKETADWL-TLRLSDRFNIVTLHGSKSQSQRESAIQKLKSGTANVLIAT 488
Query: 491 DVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+VA++GLD ++ V+N+ M + ++Y+HRI
Sbjct: 489 NVAARGLDIPDVALVVNFQMSKKFDDYIHRI 519
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 200 bits (489), Expect = 7e-50
Identities = 120/372 (32%), Positives = 194/372 (52%), Gaps = 16/372 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TFQ M + +L+ + A +PTPIQ +P L G+D+ A TG+GKT F LP++
Sbjct: 182 TFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLE 241
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
+ + + P R L++ P+REL Q H + + +L E+ +CLA+GG+
Sbjct: 242 RLIYKPREAPVTRV-----LVLVPTRELGIQVHAVTR------QLAQFTEVTTCLAVGGL 290
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDK-KMVRLNVCRYLCMDEADRMIDMGFEEDVRT 361
V ++ G +++ATPGRL+D L LN L +DEADRM+D FEE ++
Sbjct: 291 DVKTQEAALRSGPDVLIATPGRLIDHLHNCPSFSLNCIEVLILDEADRMLDEYFEEQMKE 350
Query: 362 IFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQD---LEPAQP 418
I + QRQTLLFSATM +++++ A +L PV + V + +RQ+ + P +
Sbjct: 351 IIRLCSHQRQTLLFSATMSEEVKDLASVSLRNPVRIFVNSNTDVAPFLRQEFVRIRPNRE 410
Query: 419 EARTVQLLHCLQKT-PPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVE 477
R L +T ++F + K+ +H L L G++ +HG Q +R A+
Sbjct: 411 GDREAVACALLTRTFQDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALR 470
Query: 478 AFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXX 537
F+ + D+LVATDVA++GLD ++ VIN MP +++YVHR+
Sbjct: 471 RFKDEQIDILVATDVAARGLDIDGVKTVINLTMPGTVKHYVHRVGRTARAGKAGRSVSLV 530
Query: 538 XXPDHSVLRDLV 549
+ +L+++V
Sbjct: 531 GEEERKMLKEIV 542
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 200 bits (489), Expect = 7e-50
Identities = 111/342 (32%), Positives = 185/342 (54%), Gaps = 17/342 (4%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F+ +K + +L +E G +PT IQ + +P +L G D+IG+A TG+GKT + LPI+M
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPILM- 65
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
K+ + + P +I P+REL Q ++ ++ ++R GG+
Sbjct: 66 ------KIKYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKYT------DLRIVALYGGIG 113
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
E +QKGV I+VATPGR +D+ ++ + L + + +DEAD+M+DMGF +R +
Sbjct: 114 PKLQKEHLQKGVDIIVATPGRFLDLYLEEEIVLKEVKTMVLDEADKMMDMGFMPQLRKML 173
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTV 423
+RQ LLFSATM ++++ L P+ + V + + Q L +
Sbjct: 174 EVIPRKRQNLLFSATMSERVERLTEEFLEYPMKIEVTPQATPATLISQKLYKVPNFKTKI 233
Query: 424 QLL-HCLQKTPPPT--LIFAERKQDVDAVHEYLLLKGVEAV-AIHGGKDQEERSRAVEAF 479
LL + ++K T +IF K+ D ++++++ K IH KDQ R A++ F
Sbjct: 234 HLLEYLIRKDESVTRAIIFVRTKKSADDIYKFIIRKTTNTCRIIHANKDQNSRINAMDDF 293
Query: 480 RRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ G +LVATDVA++G+D + HVIN+D+P ++Y+HRI
Sbjct: 294 KDGTIKILVATDVAARGIDVHEVSHVINFDVPIIYDDYIHRI 335
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 200 bits (489), Expect = 7e-50
Identities = 120/340 (35%), Positives = 188/340 (55%), Gaps = 11/340 (3%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + K I + + KPT +Q + +P VL+ +++I A TG+GKT F LPII
Sbjct: 3 FSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGKTAAFALPIINL 62
Query: 244 CLEQEVKMPFIRNEGPY-GLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
+ K + E L+I P+RELA Q I+++F + K + +RS GGV
Sbjct: 63 LFD---KQDAEKGEKKIKALVITPTRELAIQ---ILENFKSYSKYSN---LRSTAVFGGV 113
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++ E++ KGV I+VATPGRL+D+ + + L+ +DEAD M+DMGF D++ I
Sbjct: 114 SLEPQKEILAKGVDILVATPGRLIDLQMQGNIDLSQLEIFVLDEADLMLDMGFINDIKKI 173
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
++QTLLFSAT+P+KI ++S + V++ + + Q L + +T
Sbjct: 174 EKLCPRKKQTLLFSATIPEKIDELSKSIVKNATKVDINPEETTAKNIGQLLYYLPKKNKT 233
Query: 423 VQLLHCLQKT-PPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRR 481
LH L+ T +IF K VD + + L+ G +IHG K Q R++A+E F+
Sbjct: 234 DLCLHLLRNTINGKIIIFRRTKFAVDKLEQTLIKNGYNVASIHGDKTQGVRNKAIEDFKS 293
Query: 482 GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ +L+ATDVA++G+D N+ +IN+D+P E YVHRI
Sbjct: 294 KKASILIATDVAARGIDITNVDAIINFDIPNVPEIYVHRI 333
>UniRef50_A4RUB4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 474
Score = 200 bits (489), Expect = 7e-50
Identities = 131/417 (31%), Positives = 216/417 (51%), Gaps = 28/417 (6%)
Query: 164 IRNKLRILVEGDDP--PPPIRTFQ--HMKFPKG--ILRGLEAKGIQKPTPIQVQGMPAVL 217
+R +L++ V+G D P P++ F+ H ++ G +L + ++PTPIQ Q +P +
Sbjct: 1 MRKRLKMRVQGADGACPAPLQGFEELHERYKCGRRLLERMREANFKEPTPIQRQAVPILC 60
Query: 218 NGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDI 277
+G +++ IA TGSGKTL F LPIIM K+ G L++ P++ELA Q+ I
Sbjct: 61 SGSELLAIAPTGSGKTLAFLLPIIM-------KLGTHEEGGARALLLAPTKELAGQSARI 113
Query: 278 IQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLN 337
++ R G ++SCL A ++ +V I+VATP RL +L + L+
Sbjct: 114 LRILSR-----GVSGLKSCLLTKATAGNDFSKV-----DIVVATPMRLKILLQHDKIDLS 163
Query: 338 VCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQT-LLFSATMPKKIQNFARSALVRPVT 396
YL +DEAD++ +MGF E + + + + T LFSAT+P+K++ ARS + RP+
Sbjct: 164 KVLYLVLDEADKLFEMGFVEQIDAVVAACDNKDVTRALFSATLPEKVEELARSVMARPIR 223
Query: 397 VNVGRAGAASLTVRQDLEPAQPEARTVQLLHCL--QKTPPPTLIFAERKQDVDAVHEYLL 454
+ VG +AS T+ Q + EA + L + + PP +IF + K+ + + L
Sbjct: 224 LTVGERNSASNTISQRMVFCGHEAGKLLALRQIIREGIKPPVIIFTQSKERAKHLAKELT 283
Query: 455 LKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDI 514
G+ IH +R V+ FR GE VL+ATD+ ++G+DF + VIN+D P
Sbjct: 284 GDGLHIGLIHAEMSDSKREEQVDRFRMGETWVLIATDLMARGMDFVGVSTVINFDFPGSP 343
Query: 515 ENYVHRIXXXXXXXXXXXXXXXXXXPD--HSVLRDLVHLLREAGQRVPGFLLDMLGE 569
+Y+HRI D L+ + ++++ +G VP ++L+ GE
Sbjct: 344 TSYIHRIGRSGRAGRPGAAITFFTEEDAQRGDLKPIANVMKNSGCEVPEWMLNHTGE 400
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 200 bits (488), Expect = 9e-50
Identities = 126/381 (33%), Positives = 194/381 (50%), Gaps = 18/381 (4%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
TF+ + ++ L A G ++PTPIQ +P +L G+D++GIA TG+GKT F+LP++
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLLQ 96
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
+ PF + L++ P+RELA Q + I + + L ++ P GG
Sbjct: 97 R-ITPGAHAPFTAS----ALVLVPTRELAMQVAEAIHRYGQKLGISVVP------LYGGQ 145
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
+S+ + V+++GV ++VATPGR +D L +K ++L R + +DEAD M+DMGF ED+ I
Sbjct: 146 VISQQLRVLKRGVDVVVATPGRALDHLQRKTLKLEQVRVVVLDEADEMLDMGFAEDLEAI 205
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQ--PEA 420
S +RQT LFSAT+P +I + A L PV V + R S + + + A P A
Sbjct: 206 LSSTPEKRQTALFSATLPPRIASIAERHLREPVRVRIAREKVESGELPRVRQTAYIVPRA 265
Query: 421 RTVQLLHCLQKTPPPT--LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEA 478
V L + PT ++F + +VD + L G A
Sbjct: 266 FKVATLSRVLDVEAPTAAIVFCRTRTEVDELTLSLNGHGWRXXAXXXXXXXXXXXGXXXX 325
Query: 479 FRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXX 538
D+LVATDVA++GLD + + HV+N+D+P E YVHRI
Sbjct: 326 RLSHSADLLVATDVAARGLDISRLSHVVNFDVPNAPEAYVHRIGRTGRAGREGVAITLVE 385
Query: 539 XPDHSVLRDLVHLLREAGQRV 559
+H +LR++ L GQR+
Sbjct: 386 PREHRLLRNIEKL---TGQRI 403
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 200 bits (488), Expect = 9e-50
Identities = 125/356 (35%), Positives = 195/356 (54%), Gaps = 13/356 (3%)
Query: 173 EGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGK 232
E PPP ++ FP IL +E + PT IQ P +L G D+IGIA TGSGK
Sbjct: 85 ENQKVPPPFLSWASAGFPIPILESIEQLQFKSPTIIQSVVFPIILAGYDVIGIAQTGSGK 144
Query: 233 TLVFTLP-IIMFCLEQEVKMPFIRNE-GPYGLIICPSRELAKQTHDIIQHFIRHLKLTGS 290
T+ + LP +I ++ ++ + + GP LI+ P+RELA Q IQ F ++ +L
Sbjct: 145 TIAYLLPGLIQITSQKTEELNNTKKQNGPQMLILVPTRELAMQIESEIQLFTQNYRL--- 201
Query: 291 PEIRSCLAIGGVAVSECMEV-VQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADR 349
++ GG+ + + + +I+VATPGRL+D L + L YL +DEADR
Sbjct: 202 ---KTLCIYGGINNRKNQFYNLGRFPNILVATPGRLLDFLREGATTLANVSYLVIDEADR 258
Query: 350 MIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARS-ALVRPVTVNVGRAGAA-SL 407
++++GFE+ +R I RQT+ FSAT PK +++ A P+ V +G++ +
Sbjct: 259 LLELGFEDTIREIVQQIRFDRQTVFFSATWPKAVKDLAFDFCQYSPIYVQIGKSNLTINK 318
Query: 408 TVRQDLEPAQPEARTVQLLHCLQ--KTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHG 465
+ Q++ + + +LL L K LIF+E+KQ + + + KG +A+HG
Sbjct: 319 NIDQEIICLFQKDKLQKLLDILDTLKISDKVLIFSEQKQRCEQLSINMADKGYYTIALHG 378
Query: 466 GKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
K Q +R ++AFR G +L ATD+AS+GLD +I VINYD P+ ++Y+HRI
Sbjct: 379 DKTQPQRDEIMKAFRSGYTRLLCATDLASRGLDVTDITVVINYDFPKYFDDYIHRI 434
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 200 bits (488), Expect = 9e-50
Identities = 123/355 (34%), Positives = 188/355 (52%), Gaps = 17/355 (4%)
Query: 172 VEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSG 231
VE DD + P+ + LE +GI PIQ + L GRD+I A TG+G
Sbjct: 94 VEADDGEE--LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTG 151
Query: 232 KTLVFTLPIIMFCLEQEVKMPFIRNEG--PYGLIICPSRELAKQTHDIIQHFIRHLKLTG 289
KTL F +PII E+ R G P L++ P+RELAKQ I+
Sbjct: 152 KTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKE--------S 203
Query: 290 SPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADR 349
+P + + GGV+ + + +GV ++V TPGR++D+++ + ++L YL +DEAD+
Sbjct: 204 APYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQ 263
Query: 350 MIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVN-VGRAG---AA 405
M+ +GFEE V +I +RQ++LFSATMP ++ AR L P+ ++ VG A
Sbjct: 264 MLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAE 323
Query: 406 SLTVRQDLEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHG 465
+ + + + + L + T++F + K+D D V L + A+HG
Sbjct: 324 GIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEV-SLALSNSIATEALHG 382
Query: 466 GKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHR 520
Q +R R + AFR+G+ VLVATDVAS+GLD N+ VI+Y++P D E +VHR
Sbjct: 383 DISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHR 437
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 200 bits (488), Expect = 9e-50
Identities = 137/396 (34%), Positives = 203/396 (51%), Gaps = 32/396 (8%)
Query: 180 PIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLP 239
PI F + + GL K ++PTPIQ P +L GRD++GIA TGSGKT+ F +P
Sbjct: 165 PILQFDELDVSAKLREGL--KNYKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIP 222
Query: 240 IIMFC--LEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCL 297
+ + L +P + L++ P+RELA QT++ + I+ L ++ +
Sbjct: 223 ALQYLNGLSDNKSVPRV-------LVVSPTRELAIQTYENLNSLIQGTNL------KAVV 269
Query: 298 AIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEE 357
GG SE K +++ TPGRL+D+++ + + YL +DEADRM+D GFE+
Sbjct: 270 VYGGAPKSEQARAA-KNASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQ 328
Query: 358 DVRTIFSYFA-----GQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAG-AASLTVRQ 411
D+R I S+ G RQT+ FSAT P+ ++ A + L PV + +G AAS + Q
Sbjct: 329 DIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQ 388
Query: 412 DLEPAQ-PEARTVQLLHCLQK------TPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIH 464
+E P ++ L + L+K LIF K++ V E L + V IH
Sbjct: 389 IVEILDDPRSKERMLDNLLRKHLSSGGKDDKILIFVLYKKEAARV-EGTLARKYNVVGIH 447
Query: 465 GGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXX 524
G Q R +A+ F+ G+ VLVATDVA++GLD +Q VIN P IE+YVHRI
Sbjct: 448 GDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRT 507
Query: 525 XXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVP 560
D S +LV++LR+A Q +P
Sbjct: 508 GRANTKGTAITFFTPQDKSHAGELVNVLRQAKQDIP 543
>UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=1;
Limnobacter sp. MED105|Rep: Putative ATP-dependent RNA
helicase - Limnobacter sp. MED105
Length = 617
Score = 200 bits (487), Expect = 1e-49
Identities = 122/341 (35%), Positives = 185/341 (54%), Gaps = 9/341 (2%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F M +L+ L A I PT +Q + +P +G D++ + TGSGKT F LP++
Sbjct: 2 SFDDMGLAAPLLQALNALNITAPTLVQQEVVPLGKDGGDLMVSSQTGSGKTFGFLLPVMH 61
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
+ E + P GP L++CP+RELA+Q + Q I +K T +R +GG+
Sbjct: 62 RMMTGE-QSPMEMLAGPECLVLCPTRELAQQ---VSQDAINLVKFTKG--VRVATVVGGM 115
Query: 303 AVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
+ M + +G I+V TPGRL+D+ + + L+ L +DEADRM+D+GF ED+ I
Sbjct: 116 PYGKQMASL-RGARIVVGTPGRLLDLAQQGKLNLSTVTTLIVDEADRMLDLGFSEDLEAI 174
Query: 363 FSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEART 422
+ QTL+FSAT K+I A + + P + + A+ + Q L A
Sbjct: 175 DQLCGNRIQTLMFSATFAKRIIGLAENIMNNPKRIEMAAQNEANTDIAQKLMWADNRGHK 234
Query: 423 VQLLHCLQKTPP--PTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFR 480
+LL+ + P ++F + D + + L +GV A A+HGG Q R+R + + R
Sbjct: 235 RKLLNHWLEHPDMVQAVVFTSTQIDAENLARDLADEGVRACALHGGMPQVVRNRRLASVR 294
Query: 481 RGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+G+ VLVATDVA++GLD I HVINY MP E+YVHRI
Sbjct: 295 KGDIKVLVATDVAARGLDVPAISHVINYGMPMKSEDYVHRI 335
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.319 0.137 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,448,310
Number of Sequences: 1657284
Number of extensions: 26443158
Number of successful extensions: 77277
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 1833
Number of HSP's successfully gapped in prelim test: 286
Number of HSP's that attempted gapping in prelim test: 70956
Number of HSP's gapped (non-prelim): 3437
length of query: 620
length of database: 575,637,011
effective HSP length: 105
effective length of query: 515
effective length of database: 401,622,191
effective search space: 206835428365
effective search space used: 206835428365
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 75 (34.3 bits)
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