GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001799-TA|BGIBMGA001799-PA|IPR014001|DEAD-like
helicases, N-terminal, IPR001650|Helicase, C-terminal,
IPR014021|Helicase superfamily 1 and 2 ATP-binding, IPR014014|DEAD-box
RNA helicase Q motif, IPR011545|DEAD/DEAH box helicase, N-terminal
         (620 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   270   6e-74
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          26   2.6  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  270 bits (663), Expect = 6e-74
 Identities = 148/408 (36%), Positives = 223/408 (54%), Gaps = 13/408 (3%)

Query: 167 KLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIA 226
           ++++ V G++PP  + +F+     + ++  +      KPTPIQ   +P +LNGRD++  A
Sbjct: 159 EIQVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACA 218

Query: 227 FTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLK 286
            TGSGKT  F LP+I   L++E  +  +R   PY +I+ P+RELA Q HD  + F    K
Sbjct: 219 QTGSGKTAAFMLPMIHHLLDKEDSLE-LRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTK 277

Query: 287 LTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDE 346
           L      + C++ GG AV   +++++ G H++VATPGRL+D +D+  V      ++ +DE
Sbjct: 278 L------KVCVSYGGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDE 331

Query: 347 ADRMIDMGFEEDVRTIFSYFA----GQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRA 402
           ADRM+DMGF   +  +  +       QRQTL+FSAT P +IQ  A   L   + V VG  
Sbjct: 332 ADRMLDMGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLHNYICVFVGIV 391

Query: 403 GAASLTVRQDLEPAQPEARTVQLLHCLQK-TPPPTLIFAERKQDVDAVHEYLLLKGVEAV 461
           G A   V Q +   +   +  +L   L    P  TL+F E K++ D +   +        
Sbjct: 392 GGACADVEQTIHLVEKFKKRKKLEEILNGGNPKGTLVFVETKRNADYLASLMSETQFPTT 451

Query: 462 AIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
           +IHG + Q ER  A+  F+ G  DVL+AT VA++GLD  N+ HV+NYD+P+ I++YVHRI
Sbjct: 452 SIHGDRLQREREMALYDFKSGRMDVLIATSVAARGLDIKNVNHVVNYDLPKSIDDYVHRI 511

Query: 522 XXXXXXXXXXXXXXXXX-XPDHSVLRDLVHLLREAGQRVPGFLLDMLG 568
                               D ++  DLV +L +AGQ VP FL D  G
Sbjct: 512 GRTGRVGNKGRATSFYDPEADRAMASDLVKILTQAGQSVPDFLKDAGG 559


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 26.2 bits (55), Expect = 2.6
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 4/43 (9%)

Query: 166 NKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPI 208
           +K  +L+ G+ PPPP+   +  K P  I   L   G  + TP+
Sbjct: 450 SKSLLLLNGNGPPPPVP--ERSKTPNSIY--LSQNGTPRSTPV 488


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.137    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,510
Number of Sequences: 2123
Number of extensions: 23654
Number of successful extensions: 75
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 69
Number of HSP's gapped (non-prelim): 2
length of query: 620
length of database: 516,269
effective HSP length: 68
effective length of query: 552
effective length of database: 371,905
effective search space: 205291560
effective search space used: 205291560
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)