GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001798-TA|BGIBMGA001798-PA|undefined
         (905 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    28   1.3  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    27   2.2  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   8.9  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   8.9  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 589 IMPSIKGNKNYVKIIGRDVGGEPFVRLAGPLRRPEARTGRSAAVVFPDAVN 639
           I+P + G      I GR    EP     GP  RP+A  GRSAA   P + +
Sbjct: 55  ILPILTGPDR--PIPGRSHPAEPAPGGNGPFVRPDAPQGRSAAEGVPSSAS 103


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 27.1 bits (57), Expect = 2.2
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 107 DEKMETTSLATTRAMEDYDYVSSKAPESDGDQEVDGQGNPKTDGSEQTLAEGRQFNGPTQ 166
           D  ME+ +  T+  M DY   +     S G +E      PK  G    +A+  +F+    
Sbjct: 216 DCPMESNNTPTSTTMRDYSRKNENCSSSGGQRE---SLKPKPKGK---VAKSSEFSFTVG 269

Query: 167 PVHKNKSSTLRSWLEDS 183
            V K +    +SW+ DS
Sbjct: 270 VVSKKREQP-KSWIIDS 285


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.0 bits (52), Expect = 8.9
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 386 RLISELEKYRYDTLLVRRGGGEAISLGLTVENGVTALRVLIEGAVEHAVLYPPNDAPQID 445
           +L  E E  R + L  +R   +    G ++ N ++  R + E  +EH  L PP+      
Sbjct: 277 KLRKETELRRLERLSTQRTKRDFHPTGCSLNNLLSTNRKVYEFGLEHEGLKPPSQIILST 336

Query: 446 LY-DTDSVSSF 455
           ++  TD +S F
Sbjct: 337 IFLVTDVLSEF 347


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.0 bits (52), Expect = 8.9
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 386 RLISELEKYRYDTLLVRRGGGEAISLGLTVENGVTALRVLIEGAVEHAVLYPPNDAPQID 445
           +L  E E  R + L  +R   +    G ++ N ++  R + E  +EH  L PP+      
Sbjct: 277 KLRKETELRRLERLSTQRTKRDFHPTGCSLNNLLSTNRKVYEFGLEHEGLKPPSQIILST 336

Query: 446 LY-DTDSVSSF 455
           ++  TD +S F
Sbjct: 337 IFLVTDVLSEF 347


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.130    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 881,157
Number of Sequences: 2123
Number of extensions: 36415
Number of successful extensions: 51
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 50
Number of HSP's gapped (non-prelim): 4
length of query: 905
length of database: 516,269
effective HSP length: 70
effective length of query: 835
effective length of database: 367,659
effective search space: 306995265
effective search space used: 306995265
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 52 (25.0 bits)